Cla97C06G114870 (gene) Watermelon (97103) v2.5

Overview
NameCla97C06G114870
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionUnknown protein
LocationCla97Chr06: 5778133 .. 5778530 (-)
RNA-Seq ExpressionCla97C06G114870
SyntenyCla97C06G114870
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGCGAAGAAGATGATGGCAGTGTTTGTAATGTGCATTCTGGTGGTGGCGGCACTTGAGATATCCACCGTGGCGGCGGGGGAGGAGGCTAAATGTGATGGAAATTGCGGCGGAGTTGGTGGTTCTCCAAATACTACTCCGAGGAAAAAAACATTTTTCAGCCGCATTGCCGGTAATTAACATCTATCAATTTTTCTGCGCTTTTCAATACTGGATTTTGGCATCTCAATTTGTAATTTTTTTATTTTTTTATTTTTTTAATTTCCTTTTAGTCTTTCCTTTTTCATTTTTCATTTTTCTTTATATTAATTTTTGTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTAGATAAACTCCACCTGAAGCTACGCGATTGA

mRNA sequence

ATGGCGGCGAAGAAGATGATGGCAGTGTTTGTAATGTGCATTCTGGTGGTGGCGGCACTTGAGATATCCACCGTGGCGGCGGGGGAGGAGGCTAAATGTGATGGAAATTGCGGCGGAGTTGGTGGTTCTCCAAATACTACTCCGAGGAAAAAAACATTTTTCAGCCGCATTGCCGATAAACTCCACCTGAAGCTACGCGATTGA

Coding sequence (CDS)

ATGGCGGCGAAGAAGATGATGGCAGTGTTTGTAATGTGCATTCTGGTGGTGGCGGCACTTGAGATATCCACCGTGGCGGCGGGGGAGGAGGCTAAATGTGATGGAAATTGCGGCGGAGTTGGTGGTTCTCCAAATACTACTCCGAGGAAAAAAACATTTTTCAGCCGCATTGCCGATAAACTCCACCTGAAGCTACGCGATTGA

Protein sequence

MAAKKMMAVFVMCILVVAALEISTVAAGEEAKCDGNCGGVGGSPNTTPRKKTFFSRIADKLHLKLRD
Homology
[Close]
BLAST of Cla97C06G114870 vs. NCBI nr
Match: KGN47207.1 (hypothetical protein Csa_020977 [Cucumis sativus])

HSP 1 Score: 59.7 bits (143), Expect = 1.1e-05
Identity = 36/58 (62.07%), Postives = 40/58 (68.97%), Query Frame = 0 

Query: 4  KKMMAVFVMCILVVAALEISTVAAGEEAKCDGNCGGVGGSPNTTPRKKTFFSRIADKL 62
          KKMMAVF++CILV+AALEIS VAAGEEA             N  PRKK+ FSRI DKL
Sbjct: 3  KKMMAVFLLCILVLAALEISAVAAGEEA-------------NNIPRKKSLFSRIFDKL 47

[Close]
BLAST of Cla97C06G114870 vs. ExPASy TrEMBL
Match: A0A0A0KFK4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G200320 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 5.4e-06
Identity = 36/58 (62.07%), Postives = 40/58 (68.97%), Query Frame = 0 

Query: 4  KKMMAVFVMCILVVAALEISTVAAGEEAKCDGNCGGVGGSPNTTPRKKTFFSRIADKL 62
          KKMMAVF++CILV+AALEIS VAAGEEA             N  PRKK+ FSRI DKL
Sbjct: 3  KKMMAVFLLCILVLAALEISAVAAGEEA-------------NNIPRKKSLFSRIFDKL 47

The following BLAST results are available for this feature:
BLAST of Cla97C06G114870 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN47207.11.1e-0562.07hypothetical protein Csa_020977 [Cucumis sativus][more]
BLAST of Cla97C06G114870 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cla97C06G114870 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KFK45.4e-0662.07Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G200320 PE=4 SV=1[more]
BLAST of Cla97C06G114870 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C06G114870.1Cla97C06G114870.1mRNA