Cla97C06G112190 (gene) Watermelon (97103) v2.5

Overview
NameCla97C06G112190
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionEF-hand domain-containing protein
LocationCla97Chr06: 3200741 .. 3202472 (+)
RNA-Seq ExpressionCla97C06G112190
SyntenyCla97C06G112190
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGAATCTTGACGTTACTGATTCAGAGCGCGAGGAAACTCCTAATTCTTCAAGCACCGACGCAAAGAAGAAGCCCAAAGGTTCCATGAACCGCAGAAACGCCAAGGATGTGCCGGAGTATGAGAAACAGAGGCTTTCTAGGATCGCCGAGAACAAGAAGAGAATGGAGGCCCTTGGATTGGCTAAATTGGCGACTTCATTTTTGGATTCCTCCATGGATTTGAGGAAGATTGATAGAAAGGGGAAGCGGAAGCTGGGTGAGGCTGCCGACGAAGATTATAAGCCTGGCAATGATTCTTCAAGTTCTGAAGATGATGACTCGGAGGAGGAGGATGAAGATTTTGGAAGTGGGAAAGTTTCTGGTTCTCGTGGAATGAAGGTATCACTCTCCATTTTCTGTTATATGTACTGTACTTTTTACCATTGTACAGATGAATTATATAAATTTGTGGTAGCTGTTCTATTCATGATTTTGCGATGTTCCTTAGCTTGATTAACTGATAATTTACTGTTGGGATCCTTAACTAATAATTGCGTACATGATCTTCATTAAGTAGAATATTTAACATTTTTCCTGTAATATCCATCAAAGATGGAGATCAATGCTGAGAGTACATACACAATTTTTAAAAGAAGACAGTATTTATTGGCATGGTGAAAAGATGAACCCAATCGACAAACATCCCTAAAAGGAGCTTAGGAATTACTTTCTTTGGTCGGTATTTGGAAGGGATTTAAGGAGAAGTAACAGCTCACATTCTCTCCTTGAGAAGGAAAATCATCTATCAAGTAAAAGCAATGATGACTAGCCCTTTTTGTTTTCTTGTGATGGAACCAAGATTCTGTGTTTACCTCATTTGCATCCAACTTGGTGATTTTTGGCCAAGTATTGCCTCTTGTTTGGAAGATTTTAAATCCATATTAGCTAGTAGTAGTCAACCAACCACTAACCACTAACCAGTACATGGTTCCCCAATGGAGGGTGAAGGAAAAATCATATTATCTTGTCCATATTTCATAAGTCTTAACTTTCTCTATATTTTCCATAACCTCAATGGAGTAAGATTTTGATAGGCACCTAAATTACGAAAGTGTATATGTGAAAGCGTGGAAAAGGAGGTGTAGGTTCGTGAGAAATTAGTGTGGAACCCAGAGAATGTTGTTGGTTAGAATTGGGTTGTGGGTAGCAGGGCATATAGGATGTCTTGTTGCTTGAGGAGATTATCTTTACTGCCAAAATATTGTATTTGGTTCTCTGAGGAGAAATCGGGAGTGAAAGGGAAGCTCTCAAATCTTCCCTAGTTTATGTTGGATAAATGAAGTTGTTGGCTGAGGCCTAACATTTTGGTATTAAAGCACCATTTCAAGGAATGGTGGGTAGAAGGATGGAGAATAGGGTTGTGGAGTTGGAGGAGAAGTTGACTTTGTTTGGGAAAAGGTCGATAGAGCTGGAAACGAAGCTGGACTCTCAGTTTGTAAAGCTGAATGTGGTTGGGGGGCTTAATACATCAACTTTTTGGGACCAAGTTTGTGGTGTTGTGGGTTCAAATGCTAGATATCAGGCAAGGCAAAGTAGTCAACCAACCCCCAAAGGGTACTCATTGGTGAGTTGCTATGTTACCAAGGCAGAATAATCCTCCCAACTTTTTCGTCTGCTATTACACTTCTCTTGAGTGAATTTCATAATAGTTGACGTGGGTGGTCAAGGCCTTGCCAAAATTGATAAATGA

mRNA sequence

ATGTCGAATCTTGACGTTACTGATTCAGAGCGCGAGGAAACTCCTAATTCTTCAAGCACCGACGCAAAGAAGAAGCCCAAAGGTTCCATGAACCGCAGAAACGCCAAGGATGTGCCGGAGTATGAGAAACAGAGGCTTTCTAGGATCGCCGAGAACAAGAAGAGAATGGAGGCCCTTGGATTGGCTAAATTGGCGACTTCATTTTTGGATTCCTCCATGGATTTGAGGAAGATTGATAGAAAGGGGAAGCGGAAGCTGGGTGAGGCTGCCGACGAAGATTATAAGCCTGGCAATGATTCTTCAAGTTCTGAAGATGATGACTCGGAGGAGGAGGATGAAGATTTTGGAAGTGGGAAAGTTTCTGGTTCTCGTGGAATGAAGGTATCACTCTCCATTTTCTGTTATATGTACTTTGACGTGGGTGGTCAAGGCCTTGCCAAAATTGATAAATGA

Coding sequence (CDS)

ATGTCGAATCTTGACGTTACTGATTCAGAGCGCGAGGAAACTCCTAATTCTTCAAGCACCGACGCAAAGAAGAAGCCCAAAGGTTCCATGAACCGCAGAAACGCCAAGGATGTGCCGGAGTATGAGAAACAGAGGCTTTCTAGGATCGCCGAGAACAAGAAGAGAATGGAGGCCCTTGGATTGGCTAAATTGGCGACTTCATTTTTGGATTCCTCCATGGATTTGAGGAAGATTGATAGAAAGGGGAAGCGGAAGCTGGGTGAGGCTGCCGACGAAGATTATAAGCCTGGCAATGATTCTTCAAGTTCTGAAGATGATGACTCGGAGGAGGAGGATGAAGATTTTGGAAGTGGGAAAGTTTCTGGTTCTCGTGGAATGAAGGTATCACTCTCCATTTTCTGTTATATGTACTTTGACGTGGGTGGTCAAGGCCTTGCCAAAATTGATAAATGA

Protein sequence

MSNLDVTDSEREETPNSSSTDAKKKPKGSMNRRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLATSFLDSSMDLRKIDRKGKRKLGEAADEDYKPGNDSSSSEDDDSEEEDEDFGSGKVSGSRGMKVSLSIFCYMYFDVGGQGLAKIDK
Homology
BLAST of Cla97C06G112190 vs. NCBI nr
Match: XP_004140495.1 (uncharacterized protein LOC101206207 [Cucumis sativus] >KGN46547.1 hypothetical protein Csa_005249 [Cucumis sativus])

HSP 1 Score: 184.1 bits (466), Expect = 8.8e-43
Identity = 108/129 (83.72%), Postives = 116/129 (89.92%), Query Frame = 0

Query: 1   MSNLDVTDSER-EETPNSSSTDAKKKPKGSMNRRNAKDVPEYEKQRLSRIAENKKRMEAL 60
           MSN D+TDSE  EETPNSS+T +KKK +GSMN RN KDVPEYEKQR+SRIAENKKRMEAL
Sbjct: 1   MSNRDLTDSEHDEETPNSSTTHSKKKLRGSMNGRNVKDVPEYEKQRISRIAENKKRMEAL 60

Query: 61  GLAKLATSFLDSSMDLRKIDRKGKRKLGEAADEDYKPGNDSSSSED-DDSEEEDEDFGSG 120
           GLAK+ATSFLDSS +LRK D KGKRKLGEAAD+DYKPGNDSSSSED DDSEE DEDFGSG
Sbjct: 61  GLAKMATSFLDSSKNLRKTDIKGKRKLGEAADDDYKPGNDSSSSEDEDDSEEGDEDFGSG 120

Query: 121 KVSGSRGMK 128
           KVSGSRG K
Sbjct: 121 KVSGSRGTK 129

BLAST of Cla97C06G112190 vs. NCBI nr
Match: XP_016902477.1 (PREDICTED: uncharacterized protein LOC103499070 [Cucumis melo])

HSP 1 Score: 178.7 bits (452), Expect = 3.7e-41
Identity = 104/129 (80.62%), Postives = 114/129 (88.37%), Query Frame = 0

Query: 1   MSNLDVTDSER-EETPNSSSTDAKKKPKGSMNRRNAKDVPEYEKQRLSRIAENKKRMEAL 60
           MSN D+TDSE  EETPNSS+TD+K+K + SMN R+ KDVPEYEKQR+SRI ENKKRMEAL
Sbjct: 1   MSNRDLTDSEHDEETPNSSTTDSKRKLRSSMNCRSVKDVPEYEKQRISRITENKKRMEAL 60

Query: 61  GLAKLATSFLDSSMDLRKIDRKGKRKLGEAADEDYKPGNDSSSSED-DDSEEEDEDFGSG 120
           GL KLATSFLDSS +LRK DRKGKRKLGEAADEDY+PG DSSSSED DDSEEEDE+FGSG
Sbjct: 61  GLGKLATSFLDSSKNLRKTDRKGKRKLGEAADEDYEPGQDSSSSEDEDDSEEEDEEFGSG 120

Query: 121 KVSGSRGMK 128
           K SGSRG K
Sbjct: 121 KASGSRGTK 129

BLAST of Cla97C06G112190 vs. NCBI nr
Match: KAA0039753.1 (EF_hand_5 domain-containing protein [Cucumis melo var. makuwa] >TYK24744.1 EF_hand_5 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 178.7 bits (452), Expect = 3.7e-41
Identity = 104/129 (80.62%), Postives = 114/129 (88.37%), Query Frame = 0

Query: 1   MSNLDVTDSER-EETPNSSSTDAKKKPKGSMNRRNAKDVPEYEKQRLSRIAENKKRMEAL 60
           MSN D+TDSE  EETPNSS+TD+K+K + SMN R+ KDVPEYEKQR+SRI ENKKRMEAL
Sbjct: 1   MSNRDLTDSEHDEETPNSSTTDSKRKLRSSMNCRSVKDVPEYEKQRISRITENKKRMEAL 60

Query: 61  GLAKLATSFLDSSMDLRKIDRKGKRKLGEAADEDYKPGNDSSSSED-DDSEEEDEDFGSG 120
           GL KLATSFLDSS +LRK DRKGKRKLGEAADEDY+PG DSSSSED DDSEEEDE+FGSG
Sbjct: 61  GLGKLATSFLDSSKNLRKTDRKGKRKLGEAADEDYEPGQDSSSSEDEDDSEEEDEEFGSG 120

Query: 121 KVSGSRGMK 128
           K SGSRG K
Sbjct: 121 KASGSRGTK 129

BLAST of Cla97C06G112190 vs. NCBI nr
Match: XP_023547371.1 (caltractin-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 158.3 bits (399), Expect = 5.2e-35
Identity = 92/122 (75.41%), Postives = 102/122 (83.61%), Query Frame = 0

Query: 6   VTDSEREETPNSSSTDAKKKPKGSMNRRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLA 65
           ++DSER+E PNSSSTD KK P+GS++  + KD PEYEKQRLSRIAEN+KRMEALGLAKLA
Sbjct: 10  MSDSERKEAPNSSSTDTKKTPRGSISGGDVKDTPEYEKQRLSRIAENRKRMEALGLAKLA 69

Query: 66  TSFLDSSMDLRKIDRKGKRKLGEAADEDYKPGNDSSSSEDDDSEEEDEDFGSGKVSGSRG 125
           TSF+DSS  LRKIDRKGKRK     DEDY P  DSS+SEDDDSEE DE FGSGKVS SRG
Sbjct: 70  TSFMDSSKTLRKIDRKGKRKF----DEDYNPAEDSSNSEDDDSEEGDEGFGSGKVSRSRG 127

Query: 126 MK 128
           MK
Sbjct: 130 MK 127

BLAST of Cla97C06G112190 vs. NCBI nr
Match: XP_023547370.1 (uncharacterized protein LOC111806339 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 158.3 bits (399), Expect = 5.2e-35
Identity = 92/122 (75.41%), Postives = 102/122 (83.61%), Query Frame = 0

Query: 6   VTDSEREETPNSSSTDAKKKPKGSMNRRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLA 65
           ++DSER+E PNSSSTD KK P+GS++  + KD PEYEKQRLSRIAEN+KRMEALGLAKLA
Sbjct: 10  MSDSERKEAPNSSSTDTKKTPRGSISGGDVKDTPEYEKQRLSRIAENRKRMEALGLAKLA 69

Query: 66  TSFLDSSMDLRKIDRKGKRKLGEAADEDYKPGNDSSSSEDDDSEEEDEDFGSGKVSGSRG 125
           TSF+DSS  LRKIDRKGKRK     DEDY P  DSS+SEDDDSEE DE FGSGKVS SRG
Sbjct: 70  TSFMDSSKTLRKIDRKGKRKF----DEDYNPAEDSSNSEDDDSEEGDEGFGSGKVSRSRG 127

Query: 126 MK 128
           MK
Sbjct: 130 MK 127

BLAST of Cla97C06G112190 vs. ExPASy TrEMBL
Match: A0A0A0KDV1 (EF-hand domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G108450 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 4.3e-43
Identity = 108/129 (83.72%), Postives = 116/129 (89.92%), Query Frame = 0

Query: 1   MSNLDVTDSER-EETPNSSSTDAKKKPKGSMNRRNAKDVPEYEKQRLSRIAENKKRMEAL 60
           MSN D+TDSE  EETPNSS+T +KKK +GSMN RN KDVPEYEKQR+SRIAENKKRMEAL
Sbjct: 1   MSNRDLTDSEHDEETPNSSTTHSKKKLRGSMNGRNVKDVPEYEKQRISRIAENKKRMEAL 60

Query: 61  GLAKLATSFLDSSMDLRKIDRKGKRKLGEAADEDYKPGNDSSSSED-DDSEEEDEDFGSG 120
           GLAK+ATSFLDSS +LRK D KGKRKLGEAAD+DYKPGNDSSSSED DDSEE DEDFGSG
Sbjct: 61  GLAKMATSFLDSSKNLRKTDIKGKRKLGEAADDDYKPGNDSSSSEDEDDSEEGDEDFGSG 120

Query: 121 KVSGSRGMK 128
           KVSGSRG K
Sbjct: 121 KVSGSRGTK 129

BLAST of Cla97C06G112190 vs. ExPASy TrEMBL
Match: A0A5D3DMC4 (EF_hand_5 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G003070 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.8e-41
Identity = 104/129 (80.62%), Postives = 114/129 (88.37%), Query Frame = 0

Query: 1   MSNLDVTDSER-EETPNSSSTDAKKKPKGSMNRRNAKDVPEYEKQRLSRIAENKKRMEAL 60
           MSN D+TDSE  EETPNSS+TD+K+K + SMN R+ KDVPEYEKQR+SRI ENKKRMEAL
Sbjct: 1   MSNRDLTDSEHDEETPNSSTTDSKRKLRSSMNCRSVKDVPEYEKQRISRITENKKRMEAL 60

Query: 61  GLAKLATSFLDSSMDLRKIDRKGKRKLGEAADEDYKPGNDSSSSED-DDSEEEDEDFGSG 120
           GL KLATSFLDSS +LRK DRKGKRKLGEAADEDY+PG DSSSSED DDSEEEDE+FGSG
Sbjct: 61  GLGKLATSFLDSSKNLRKTDRKGKRKLGEAADEDYEPGQDSSSSEDEDDSEEEDEEFGSG 120

Query: 121 KVSGSRGMK 128
           K SGSRG K
Sbjct: 121 KASGSRGTK 129

BLAST of Cla97C06G112190 vs. ExPASy TrEMBL
Match: A0A1S4E2M5 (uncharacterized protein LOC103499070 OS=Cucumis melo OX=3656 GN=LOC103499070 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.8e-41
Identity = 104/129 (80.62%), Postives = 114/129 (88.37%), Query Frame = 0

Query: 1   MSNLDVTDSER-EETPNSSSTDAKKKPKGSMNRRNAKDVPEYEKQRLSRIAENKKRMEAL 60
           MSN D+TDSE  EETPNSS+TD+K+K + SMN R+ KDVPEYEKQR+SRI ENKKRMEAL
Sbjct: 1   MSNRDLTDSEHDEETPNSSTTDSKRKLRSSMNCRSVKDVPEYEKQRISRITENKKRMEAL 60

Query: 61  GLAKLATSFLDSSMDLRKIDRKGKRKLGEAADEDYKPGNDSSSSED-DDSEEEDEDFGSG 120
           GL KLATSFLDSS +LRK DRKGKRKLGEAADEDY+PG DSSSSED DDSEEEDE+FGSG
Sbjct: 61  GLGKLATSFLDSSKNLRKTDRKGKRKLGEAADEDYEPGQDSSSSEDEDDSEEEDEEFGSG 120

Query: 121 KVSGSRGMK 128
           K SGSRG K
Sbjct: 121 KASGSRGTK 129

BLAST of Cla97C06G112190 vs. ExPASy TrEMBL
Match: A0A6J1H502 (caltractin-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111460448 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 3.3e-35
Identity = 92/122 (75.41%), Postives = 102/122 (83.61%), Query Frame = 0

Query: 6   VTDSEREETPNSSSTDAKKKPKGSMNRRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLA 65
           ++DSER+E PNSSSTD KK P+GS++  + KD PEYEKQRLSRIAEN+KRMEALGLAKLA
Sbjct: 10  MSDSERKEAPNSSSTDTKKTPRGSISGGDVKDTPEYEKQRLSRIAENRKRMEALGLAKLA 69

Query: 66  TSFLDSSMDLRKIDRKGKRKLGEAADEDYKPGNDSSSSEDDDSEEEDEDFGSGKVSGSRG 125
           TSF+DSS  LRKIDRKGKRK     DEDY PG  SS+SEDDDSEE DE FGSGKVS SRG
Sbjct: 70  TSFMDSSKTLRKIDRKGKRKF----DEDYNPGEGSSNSEDDDSEEGDEGFGSGKVSRSRG 127

Query: 126 MK 128
           MK
Sbjct: 130 MK 127

BLAST of Cla97C06G112190 vs. ExPASy TrEMBL
Match: A0A6J1H6F0 (uncharacterized protein LOC111460448 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460448 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 3.3e-35
Identity = 92/122 (75.41%), Postives = 102/122 (83.61%), Query Frame = 0

Query: 6   VTDSEREETPNSSSTDAKKKPKGSMNRRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLA 65
           ++DSER+E PNSSSTD KK P+GS++  + KD PEYEKQRLSRIAEN+KRMEALGLAKLA
Sbjct: 10  MSDSERKEAPNSSSTDTKKTPRGSISGGDVKDTPEYEKQRLSRIAENRKRMEALGLAKLA 69

Query: 66  TSFLDSSMDLRKIDRKGKRKLGEAADEDYKPGNDSSSSEDDDSEEEDEDFGSGKVSGSRG 125
           TSF+DSS  LRKIDRKGKRK     DEDY PG  SS+SEDDDSEE DE FGSGKVS SRG
Sbjct: 70  TSFMDSSKTLRKIDRKGKRKF----DEDYNPGEGSSNSEDDDSEEGDEGFGSGKVSRSRG 127

Query: 126 MK 128
           MK
Sbjct: 130 MK 127

BLAST of Cla97C06G112190 vs. TAIR 10
Match: AT1G73440.1 (calmodulin-related )

HSP 1 Score: 50.8 bits (120), Expect = 1.1e-06
Identity = 53/127 (41.73%), Postives = 73/127 (57.48%), Query Frame = 0

Query: 9   SEREETPNSSSTDAKKKPKGSMNRRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLATSF 68
           SERE + +SSS +  +  KG++++        YEKQRLSRIAENK R++ALG++K A + 
Sbjct: 13  SERESS-SSSSGNESEPTKGTISK--------YEKQRLSRIAENKARLDALGISKAAKAL 72

Query: 69  LDSSMDLRKIDRKGKRKLGEAADEDYKPG-NDSSSSEDDDSEE---EDEDFGSGKVSGSR 128
           L  S   +K  R+ KR  GE  D+DY P   D    EDDD  E   EDE+F   + + S 
Sbjct: 73  LSPSPVSKK--RRVKRNSGE-EDDDYTPVIADGDGDEDDDEVEEIDEDEEFLCKRKNKSS 127

Query: 129 GMKVSLS 132
             K  +S
Sbjct: 133 ASKRKVS 127

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004140495.18.8e-4383.72uncharacterized protein LOC101206207 [Cucumis sativus] >KGN46547.1 hypothetical ... [more]
XP_016902477.13.7e-4180.62PREDICTED: uncharacterized protein LOC103499070 [Cucumis melo][more]
KAA0039753.13.7e-4180.62EF_hand_5 domain-containing protein [Cucumis melo var. makuwa] >TYK24744.1 EF_ha... [more]
XP_023547371.15.2e-3575.41caltractin-like isoform X2 [Cucurbita pepo subsp. pepo][more]
XP_023547370.15.2e-3575.41uncharacterized protein LOC111806339 isoform X1 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KDV14.3e-4383.72EF-hand domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G108450 PE=... [more]
A0A5D3DMC41.8e-4180.62EF_hand_5 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
A0A1S4E2M51.8e-4180.62uncharacterized protein LOC103499070 OS=Cucumis melo OX=3656 GN=LOC103499070 PE=... [more]
A0A6J1H5023.3e-3575.41caltractin-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111460448 PE=4 SV... [more]
A0A6J1H6F03.3e-3575.41uncharacterized protein LOC111460448 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
Match NameE-valueIdentityDescription
AT1G73440.11.1e-0641.73calmodulin-related [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..49
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..124
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..102

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C06G112190.2Cla97C06G112190.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding