Cla97C06G111400 (gene) Watermelon (97103) v2.5

Overview
NameCla97C06G111400
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionrRNA-processing protein fcf2
LocationCla97Chr06: 2091921 .. 2098157 (-)
RNA-Seq ExpressionCla97C06G111400
SyntenyCla97C06G111400
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACGATATGGACATATGGTATCGATGTGGGAACTTTGTCAACTCTTTGGGCCTTTTTGTTGAGATGTTGAACACCTTCCTCCTTCAAATGAATTTGGTTTTTTTATGCTTTGCAGGGTGGGATAGACACCAACGAACTATTGGGGTTGGATGGTTGACCACTTGAAAGAGCATAAGATTGACGAAGCTATCATAATTCTTTGGTGTTTATGAAACTATAGAGGACGCCTAACATATTAGTTGGATAACAAAATTTCTTTCTATATAAATGAAATTTAAAAAGTGAAAGGTGCCAAATTTCTTATAGATTGGTTGGATAACTTAATCAGTCACATCCCAAAGAGTCCCCTAGTTCAAATGAGTGGACATCCAATACTTATGTTGCTTGGAATTCTACCATGAAATTCAGTGGTTAGGGTTGAGTGGTTCGTGACTCTTTAGAATCTCCAATATATGTCGATTTCAAAAAGTTTTTTTTATGAGTGATCTATTAATATTTTAGAACAAAGCTATTTACGAAAGGTTTACAAAATATTTATTATTTATATAAAAAAACTCCACAATTTATTTATTTTTAAATAACAAAAAAACTAAAAAAAATTAAGTTAACTTACAAATTTAATTCCTAATTTAGTTCTTATAAATACTCAATTAACTAAATTCTAACTCTTTGCCCATCATACGACTAAATTCTAACATTCTACGTAATCGTTGAGACCAAATTCGTAATTAAAAAGGGAAAAAAAGAAAAAACTTGATCTCTCGCAAACCCTCGTGAAAAGAGGGGGGATAGCCTTCTCGAGTCTGATTTTCGCACAAACCCTCACTCTCTCGCTGTGTCCTCCTCAATCTTCTGCAGTCTTCCCCAATCTCACGATCTTGCACTGCGCAAGACGGGTTAAGCCTTGGGCTTGTTCGCTTGGAGGTCGTCTTCGTGGGCTTGCCGTGTTAAGCCGCCGTCCACCGTTCGTTGTGGAAGTCGTGCGTAGCAGAATTTTAATAAATATTTTGATTTGCTCGAAACCGAAAACCGAACTGACCAGGAACTAATTGATCTTTTTTTTCTTTTATTTGGTGTAGATGTCAGAAAGAAAGCCTATCATTGGCCTCTCTTGGGAGCCAAAGCTGCCCGCCTCCTCATTGGGGGTCAGAACTAAAACTTGTGATAAATCTAACAGTCAAGCAGAAAACAGTCTTGTTTGGAAAACCAACTCAGAGCTTGTTGATGGGCTGTTTGTTCCACCAAACAAACCAAAAAAATTGAACAAGTTATTGAGAAAGCAAGTCAGCGACACGGCTGGGAGGAATTGGTATATGTTATTTTCTATAAAATTCAGCAGTTTTATTGTTGATTTCTGGAAAAAAAAAAAAAAAAACCGACAAAAGCGTTTTTTCTCCTTTCCCATTGTTCTAATTTTATTTGAATGCTGATTAACCATAGTAGTTGATGATATTCTAAATTATAATACCCATACGCTTGTTATTGTAACTAGGTTTGACATGCCAGCACAAACCGTGACCCCTGAAGTGGAAAAAGATTTGCGCTTGTTGAAGGTGAGCCTACATCTGATGTTCCATTTTATTCTTTATCAGTTTTCTTTTCCACTCATATAGCAAGCTGGTAACTTTGACCATGTATCAAGAGTTGTAACTTTTAATCATGCTACAGAGCTCTTCAGTTGTGAGATGGGTATATCTTGCGTGTTTCCTGTGAATATCTTGGGTTCCAAACCTTCAAGAGTCAACGTTTTTCTAGAGCCAGGACACTGAGTATATATGAATCTATGTTTGGTATGATGGACGTAACGACTAATTAGAATGTCACTTTTCTACGTATTTGATTTCTTAGGGTCGTATAGGGAAACAGTAATACATTTTGAGGCCACATGAAACACATATTCTAGTACCATTCATTCGTATTTGGAGCCCTAACCCATTGAGGGCCTTTCTTGTAGTTATTTCTTTCATTACTTATTAGATCATTCTTCTTCTAGGGAGCTCATGTTCTTGGTTCTTCGGATGGTGGAAATCTCAAAAAAAGATGACGTTCTTTGTCTATTAAGTTATCCATGGAAGAATCAATACCTTGGATAGGCTCTTGAGGAAGATGCTTTTGGTTGGGCCTTTTGAAAGACATGTTATTAGGGGTATTTTAGCAAGTAGTTAGAGATTTTCTTAGGGTATTTGGTTATAAATAGAGAGAGGATGAAGGGGGGAATAATTAGACATTAATTTGGTGATTGAATTAGAGTTTGATAGAGATCTCAATGGGGAAGGTCCAAGTAGGGGTGTGCAAAAACCGAAAAAAACCGCAAAACTGTGAACCAAAACATGAATCAGGTTGGTTCGGTTCAAGAAATGAAACCGATGAAAATTGGTTTTCAATGGTTCTTCTTCGTTGTGAATCGATGACATCGATTTGGTTCATGGTTCAGCCGAAAACCAGACCGAACCGAACCGTGCACACCCCTAGGTCCAAGTACCTTAAATTGCTTGGTTATTTTATAAGTTTTCATCCTTTACATTAACATTGATTGTGTAATGCTTCCTACCAAATTGGTATAGAGTTGTTTCGGTTCTGGCTGTGAAGTTTGATGAAAGTTTGTGTGAATAAATAATGAAGAGTGTATGTGAAGGGTTGAAGGAATTGATAGATTGATGGCAAAAGCACATGAAGTCGATATTCCAATCTTTTTAAGATACAACTCAAAAGATTGAAGAGAAAATTGAATTAGCAAAAGGAAGAAAAGGAATCAAGAGTCTTATCTAGCCAGGGTGGAGTTGAAAGGGAAATTGATCAAGCAAAGAAGGAGAAATAAGAGCTGGTCGAAGAGGAAAGTCCTCATATAGACGCGAGGAAAAATAGAAAAAAAAGTAAGAATTTGTCGAGGAAGAATGAGGTTGTACGAAAGTGAAAGAAAGCACTCAGGAAGGATGATGGGTAATTTGAAAGGGTGCCTGGAAAAACATCGAGGAAGAAGGGTTGAGAAAGTCAGTTGCTAATTTTGCCAACATTTGAAAACATACGAGGGGTGTGAAATGCGTTTAAGGTGAAGGAGGCGAATTATCTAAGGGAGATATGTCATTGTCAGCAAGGAGCATTGTTGGCAAAATACGTCCGAAGGGAGATTATTGGCCATCGTTGTTTTGAAGGTTGGGGATGAAAAACTGGAAGCGATGTTGGCACCATGGTTGTAAGGAGGCAACAGAGAGATCGAGGGTGTACAATAAAGACGAAGATGTAAATAAAGAAGAAAGGTACCTACAGGCCTTCGCAGGCGGCAAGTGAAGGCATGCACGTAGATGAAAACTTGGGGAGGCACCAATGCAAGTTGGGGAAGATGGGCGTGTGCATATGAGGTTTGTTATCGATTGTCATGTGCATTGTGAGAATAAAAACGATCATGGAAGTAATCGAGCCCTAACTACTGCATTTCATTAAATGAATTGACGAGACTCACTTGTTTGGGTTGGATTCAAATAAGATTAGTAAGGGCCATTTCAAGTCAAAGGCAAAATTAGGATTTGTTATATAAGATTGAGTTTTGGGCTGGATTTGTCTATATTTTTAACCTTCAACCTGACTAGGGTTGGCATGGGTCTACACACGAAGGAATCCTAGTCGCTATAGTTCTCTTCCTTTATTGTTCACCTGTGTTGATGCCACATTCACTTACTAATGTATTGGCTTGACAACATCTATGTTCTTGCTGCCAACTCTCGATGCCTGTATTGTCGTTGTTGTTTACCACCCACACTTCACCATTTGTTGATTGCCAACACACAAGCTTGAGTTTCAAGTTTTTGAAGGGTGGCTTGGCTCTATGGATGCATTTTTTTTTTCCAAAAAAACTTCAGTTTGCTCTAAATCTAATTTTGGTTTTTGTTTTGTCTAACCACTCCTTGAGGATAAGGTGTGTTTAAGGGGCGGGTAATGATAGTAATGTCATTAAGGGTATATTAGTAATTAGATAAAGAATTTGTTAGGGTATTTTGTTATAAATAGAGAGGATGATGAAGAAAGGGGAAGTTAGACATTGTTTTGGTTAATGAATTAGAGTTTGAAATAGATATTTGGGAGGATCCAAGTACCTCGAATTATTTAGCTACCTTGTAAGTTTTCATTCTAGACGCCTCATTATAGTTGGATTTTGTACTAGTTCCTACCACCTCGTGTTGCATCATTTGTTAGAGGGTGGAGGAAGATTTGAATAATTAAGTTTGGAGTTGTGATTATGCTCAGTTGGTATGGAATTACTTCAGGGGTAGGGAAATTTTTTATGGCAAGCCAGGGTGTGTGCTTTATTGTGGGATTTTTTATCGGAAAGAATGATAGGATTTTGAGAGGGATTGATATTTGATCCCTTGTGAGATTTAATGTTTCTCCTAGGTGGCGGTGACAAGTTCCTTTTGTAATTATTTGCTTGGTCTTATTGTATTTGATTGGAGTCCTTTGCTATAGGGTTGCTCCTTCTTGTGGCCTTCGTGTGTGTATGAGTTTGTATGCCCTTGTATTTTTTCATTTCTTCTTAATCGGAGTTGGTCTTTTATTAATATATATATTATATTCCACTACACAGTTCATTAGTTCTTGAAACTGTAATATGTTGTTGAAGCTGTGCATTTTGGGGCTTCTAAACCTGATGTTGGACATCGAGTGCATAGGGGCTAGCTTGGGTTGTTTTTTTTTTGTTATTATTATTTTTTTTTTGCTCTTTTCGCCATTGCATTTATGATCTTGAATTTGTGGAAGTAAGAGATAGATATTCAACTCGTGAATAATATTTATATTTACTAATGTAATTGATTTCAATGATCCATCTATCTATTTACATGTTTATTATCGTCTATTCCGTCTGAAGAAATTTGTTTGACCAACTTCTGCATCTCTATTTCTTTTGATGATTATAGCTGAGGAGTGTCATTGATCCCAAGAGACACTACAAAAAGGGTGATTCAAAATCAAAAACACTTCCCAAATATTTCCAGGCAAGTTTTGAATTTCACGAGTATTTTACTAATTTTATACATTGGCAAAAGTAAAATTTTCTTATTTGACTTAATTTACAGCGTATATATCTGCTTAGAACCTATGTAATGTTTTAAGTATTTATCAGGTGGGAACTGTGGTTGAGTCTTCTTTGGACTTCTTCACGGGTAGATTAACAAAGAAGGAAAGGAAAGCAACGCTTGCAGACGAACTGCTATCTGACCAGGCTCTCACTCAGTACAGGTTTGATCTTTATAATGTCCTTTTGCTATTGCTAAATTTTCCAGTGAAGAAAAAGAAATGGGGAAGTATATGGCTACCCATTTTGAATTCTACAAATTATCCATTCCTAGGCTATGGTTGCTTCCTGAGAATCACTTGCATGGGGGACGTCATTTTTTATACATGTTAAGAAGTTAAACTTAGATCTGAAAAATTGTATTCTAATGAAACAATGGTGGAGCGTGATCGGGCTCTTATCTTATCATTTTTGTATCCCTCAAAACAGATTGTAGTGATAATGTCTTCTTAACCAGTTTTTTTCATAGACTCTCACATCATAATTTTGAAGATTCTTTTGCTTCAAGTCGGAATGTAATAATTCTGGTGCATTACCAAGCATTTTGTTGTGCTTATGTTTTTTTAAAAACCTCTTGCAGGAAACGCAAAGTTCAAGAAATCGAAGAGCAGAATCGACCTGCTGGCAACGATAAATGGAAAATAAGGGGTCGTCATTCACAAAAACGGGCAAAGGATAGGAGGCAGTAGTTAAGCTACCTCAAAATTTTGACGTGTAAGCCATATAAACACAGCAGGATCGAATCAAGCTAGGTGGGTGGGGTTTGTGACCCAGTGTGATACAATAGTAGGCGAATTCATCATTTGTACTGCCGGCTCCAACTTGATTTATGGGCTAGGTGAAGTCCTTCAAATATTCCCCCCTATTGAATTGATGATTTGTATTAGGAGTAGAAATGTTCTTCAGGTTATTTTATTGAACCTGTATTTAAGAAATTTTGTTTATTTGCCACCAAGTATAACGACGTATTATTGGGGAAAAAAAGTTGGGAAGAAAGTGCTTTTTGGGGAACAAATGTGTGCTGTCCATAAACCATGGAGAATACGAACATAACTTATGATTGACTTTTTGTGTGTTTGAAAAAGTTTTAAAAGGAATTTTATTGAGTTGAAACTTGAAAAGAAAAAAAGTTAAATGGTAACAATTTGATAATCAGATGGTTTGAT

mRNA sequence

ATGGACGATATGGACATATGGTATCGATGTGGGAACTTTGTCAACTCTTTGGGCCTTTTTGTTGAGATGTTGAACACCTTCCTCCTTCAAATGAATTTGGTTTTTTTATGCTTTGCAGGGTGGGATAGACACCAACGAACTATTGGGTCACATCCCAAAGAGTCCCCTAGTTCAAATGAGTGGACATCCAATACTTATGTTGCTTGGAATTCTACCATGAAATTCAGTGTCTTCCCCAATCTCACGATCTTGCACTGCGCAAGACGGGTTAAGCCTTGGGCTTGTTCGCTTGGAGGTCGTCTTCGTGGGCTTGCCGTGTTAAGCCGCCGTCCACCGTTCGTTGTGGAAGTCATGTCAGAAAGAAAGCCTATCATTGGCCTCTCTTGGGAGCCAAAGCTGCCCGCCTCCTCATTGGGGGTCAGAACTAAAACTTGTGATAAATCTAACAGTCAAGCAGAAAACAGTCTTGTTTGGAAAACCAACTCAGAGCTTGTTGATGGGCTGTTTGTTCCACCAAACAAACCAAAAAAATTGAACAAGTTATTGAGAAAGCAAGTCAGCGACACGGCTGGGAGGAATTGGTTTGACATGCCAGCACAAACCGTGACCCCTGAAGTGGAAAAAGATTTGCGCTTGTTGAAGGTGGGAACTGTGGTTGAGTCTTCTTTGGACTTCTTCACGGGTAGATTAACAAAGAAGGAAAGGAAAGCAACGCTTGCAGACGAACTGCTATCTGACCAGGCTCTCACTCAGTACAGGAAACGCAAAGTTCAAGAAATCGAAGAGCAGAATCGACCTGCTGGCAACGATAAATGGAAAATAAGGGGTCGTCATTCACAAAAACGGGCAAAGGATAGGAGGCAGTAGTTAAGCTACCTCAAAATTTTGACGTGTAAGCCATATAAACACAGCAGGATCGAATCAAGCTAGGTGGGTGGGGTTTGTGACCCAGTGTGATACAATAGTAGGCGAATTCATCATTTGTACTGCCGGCTCCAACTTGATTTATGGGCTAGGTGAAGTCCTTCAAATATTCCCCCCTATTGAATTGATGATTTGTATTAGGAGTAGAAATGTTCTTCAGGTTATTTTATTGAACCTGTATTTAAGAAATTTTGTTTATTTGCCACCAAGTATAACGACGTATTATTGGGGAAAAAAAGTTGGGAAGAAAGTGCTTTTTGGGGAACAAATGTGTGCTGTCCATAAACCATGGAGAATACGAACATAACTTATGATTGACTTTTTGTGTGTTTGAAAAAGTTTTAAAAGGAATTTTATTGAGTTGAAACTTGAAAAGAAAAAAAGTTAAATGGTAACAATTTGATAATCAGATGGTTTGAT

Coding sequence (CDS)

ATGGACGATATGGACATATGGTATCGATGTGGGAACTTTGTCAACTCTTTGGGCCTTTTTGTTGAGATGTTGAACACCTTCCTCCTTCAAATGAATTTGGTTTTTTTATGCTTTGCAGGGTGGGATAGACACCAACGAACTATTGGGTCACATCCCAAAGAGTCCCCTAGTTCAAATGAGTGGACATCCAATACTTATGTTGCTTGGAATTCTACCATGAAATTCAGTGTCTTCCCCAATCTCACGATCTTGCACTGCGCAAGACGGGTTAAGCCTTGGGCTTGTTCGCTTGGAGGTCGTCTTCGTGGGCTTGCCGTGTTAAGCCGCCGTCCACCGTTCGTTGTGGAAGTCATGTCAGAAAGAAAGCCTATCATTGGCCTCTCTTGGGAGCCAAAGCTGCCCGCCTCCTCATTGGGGGTCAGAACTAAAACTTGTGATAAATCTAACAGTCAAGCAGAAAACAGTCTTGTTTGGAAAACCAACTCAGAGCTTGTTGATGGGCTGTTTGTTCCACCAAACAAACCAAAAAAATTGAACAAGTTATTGAGAAAGCAAGTCAGCGACACGGCTGGGAGGAATTGGTTTGACATGCCAGCACAAACCGTGACCCCTGAAGTGGAAAAAGATTTGCGCTTGTTGAAGGTGGGAACTGTGGTTGAGTCTTCTTTGGACTTCTTCACGGGTAGATTAACAAAGAAGGAAAGGAAAGCAACGCTTGCAGACGAACTGCTATCTGACCAGGCTCTCACTCAGTACAGGAAACGCAAAGTTCAAGAAATCGAAGAGCAGAATCGACCTGCTGGCAACGATAAATGGAAAATAAGGGGTCGTCATTCACAAAAACGGGCAAAGGATAGGAGGCAGTAG

Protein sequence

MDDMDIWYRCGNFVNSLGLFVEMLNTFLLQMNLVFLCFAGWDRHQRTIGSHPKESPSSNEWTSNTYVAWNSTMKFSVFPNLTILHCARRVKPWACSLGGRLRGLAVLSRRPPFVVEVMSERKPIIGLSWEPKLPASSLGVRTKTCDKSNSQAENSLVWKTNSELVDGLFVPPNKPKKLNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLKVGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQNRPAGNDKWKIRGRHSQKRAKDRRQ
Homology
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BLAST of Cla97C06G111400 vs. NCBI nr
Match: XP_038876081.1 (rRNA-processing protein fcf2 [Benincasa hispida] >XP_038876082.1 rRNA-processing protein fcf2 [Benincasa hispida])

HSP 1 Score: 303.5 bits (776), Expect = 1.9e-78
Identity = 159/196 (81.12%), Postives = 165/196 (84.18%), Query Frame = 0 

Query: 118 MSERKPIIGLSWEPKLPASSLGVRTKTCDKSNSQAENSLVWKTNSELVDGLFVPPNKPKK 177
           MSE+KPIIGLSWEPKLPASS G+RTK CDKSN+QAEN LVWKTNSELVDGLFVPPN PKK
Sbjct: 1   MSEKKPIIGLSWEPKLPASSSGIRTKACDKSNTQAENGLVWKTNSELVDGLFVPPNNPKK 60

Query: 178 LNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLK----------------------- 237
           LNKLLRKQV DTAGRNWFDMPAQT+TPEVEKDLRLLK                       
Sbjct: 61  LNKLLRKQVRDTAGRNWFDMPAQTMTPEVEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120

Query: 238 ---VGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQNRPAGNDK 288
              VGTVVESSLDFF+GRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQNRPAGNDK
Sbjct: 121 YFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQNRPAGNDK 180

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BLAST of Cla97C06G111400 vs. NCBI nr
Match: XP_008459856.1 (PREDICTED: rRNA-processing protein fcf2 [Cucumis melo])

HSP 1 Score: 298.5 bits (763), Expect = 6.2e-77
Identity = 155/196 (79.08%), Postives = 165/196 (84.18%), Query Frame = 0 

Query: 118 MSERKPIIGLSWEPKLPASSLGVRTKTCDKSNSQAENSLVWKTNSELVDGLFVPPNKPKK 177
           MSERKPIIGLSWEPKLPASS G++TKTCDKSN+QAEN +VWK+NSELVDGLFVPPN PKK
Sbjct: 1   MSERKPIIGLSWEPKLPASSSGIKTKTCDKSNNQAENGIVWKSNSELVDGLFVPPNNPKK 60

Query: 178 LNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLK----------------------- 237
           LNKLLRKQVSDTAGRNWFDMPA+T+TPEVEKDLRLLK                       
Sbjct: 61  LNKLLRKQVSDTAGRNWFDMPAKTMTPEVEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120

Query: 238 ---VGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQNRPAGNDK 288
              VGTVVESSLDFF+GRLTKKERKATLADELLSDQALTQYRKRKV+EIEEQNRP GNDK
Sbjct: 121 YFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEEQNRPGGNDK 180

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BLAST of Cla97C06G111400 vs. NCBI nr
Match: XP_011656806.1 (rRNA-processing protein fcf2 [Cucumis sativus] >KGN46455.1 hypothetical protein Csa_005413 [Cucumis sativus])

HSP 1 Score: 294.3 bits (752), Expect = 1.2e-75
Identity = 154/196 (78.57%), Postives = 163/196 (83.16%), Query Frame = 0 

Query: 118 MSERKPIIGLSWEPKLPASSLGVRTKTCDKSNSQAENSLVWKTNSELVDGLFVPPNKPKK 177
           MS+ KPIIGLSWEPKLPASS G++ KTCDKSNSQAEN LVWK+NSELVDGLFVPPN PKK
Sbjct: 1   MSKGKPIIGLSWEPKLPASSSGIKAKTCDKSNSQAENGLVWKSNSELVDGLFVPPNNPKK 60

Query: 178 LNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLK----------------------- 237
           LNKLLRKQVSDTAGRNWFDMPA+T+TPEVEKDLRLLK                       
Sbjct: 61  LNKLLRKQVSDTAGRNWFDMPAKTMTPEVEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120

Query: 238 ---VGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQNRPAGNDK 288
              VGTVVESSLDFF+GRLTKKERKATLADELLSDQALTQYRKRKV+EIEEQNRP GNDK
Sbjct: 121 YFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEEQNRPGGNDK 180

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BLAST of Cla97C06G111400 vs. NCBI nr
Match: XP_023005116.1 (rRNA-processing protein fcf2-like [Cucurbita maxima])

HSP 1 Score: 287.3 bits (734), Expect = 1.4e-73
Identity = 150/197 (76.14%), Postives = 161/197 (81.73%), Query Frame = 0 

Query: 117 VMSERKPIIGLSWEPKLPASSLGVRTKTCDKSNSQAENSLVWKTNSELVDGLFVPPNKPK 176
           +MS +KP+I LSWEPKLP SS G++TK CDKS+SQAEN LVWK NSELVDGLFVPPN PK
Sbjct: 1   MMSGKKPVISLSWEPKLPTSSSGIKTKACDKSHSQAENGLVWKNNSELVDGLFVPPNNPK 60

Query: 177 KLNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLK---------------------- 236
           KLNKLLRKQVSDTAGR+WFDMPAQT+TPE+EKDLRLLK                      
Sbjct: 61  KLNKLLRKQVSDTAGRSWFDMPAQTMTPEMEKDLRLLKLRSVIDPKRHYKKGDSKSKTLP 120

Query: 237 ----VGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQNRPAGND 288
               VGTVVESSLDFF+GRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQNRP GND
Sbjct: 121 KYFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQNRPGGND 180

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BLAST of Cla97C06G111400 vs. NCBI nr
Match: XP_022155405.1 (rRNA-processing protein fcf2 [Momordica charantia])

HSP 1 Score: 285.8 bits (730), Expect = 4.1e-73
Identity = 149/196 (76.02%), Postives = 163/196 (83.16%), Query Frame = 0 

Query: 118 MSERKPIIGLSWEPKLPASSLGVRTKTCDKSNSQAENSLVWKTNSELVDGLFVPPNKPKK 177
           MSE+KP+IGLSWEPKL  SS G++TKTCDKS+ Q E+SLVWKTN+ELVDGLFVPPN PKK
Sbjct: 1   MSEKKPVIGLSWEPKLATSSSGIKTKTCDKSHIQPESSLVWKTNTELVDGLFVPPNNPKK 60

Query: 178 LNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLK----------------------- 237
           LNKLLRKQVSDTAGR+WFDMPAQT+TPE+EKDLRLLK                       
Sbjct: 61  LNKLLRKQVSDTAGRSWFDMPAQTMTPELEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120

Query: 238 ---VGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQNRPAGNDK 288
              VGTVVESSLDFF+GRLTKKERKATLADELLSDQALTQYRKRKV+EIEE NRPAGNDK
Sbjct: 121 YFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEELNRPAGNDK 180

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BLAST of Cla97C06G111400 vs. ExPASy Swiss-Prot
Match: O42877 (rRNA-processing protein fcf2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=fcf2 PE=3 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 4.7e-11
Identity = 46/131 (35.11%), Postives = 67/131 (51.15%), Query Frame = 0 

Query: 183 RKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLK------------------------VGTV 242
           +K + DTAG NWFDMPA  +T  V++D++LLK                        VG++
Sbjct: 104 KKNIKDTAGSNWFDMPATELTESVKRDIQLLKMRNALDPKRHYRRENTKSMPKYFQVGSI 163

Query: 243 VESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQNRPAGNDKWKIRGRH 289
           VE   DF++ R+  +ERK T+ DELL D     Y K+K  E++         K K+ GR 
Sbjct: 164 VEGPQDFYSSRIPTRERKETIVDELLHDSERRSYFKKKYLELQ---------KSKMSGRK 223

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BLAST of Cla97C06G111400 vs. ExPASy Swiss-Prot
Match: Q0P5H2 (Deoxynucleotidyltransferase terminal-interacting protein 2 OS=Bos taurus OX=9913 GN=DNTTIP2 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.0e-10
Identity = 46/154 (29.87%), Postives = 72/154 (46.75%), Query Frame = 0 

Query: 135 ASSLGVRTKTCDKSNSQAENSLVWKT--NSELVDGLFVPP--NKPKKLNKLLRKQVSDTA 194
           A  + +  +T  +   + ++ L+ KT    E      VPP      KL K  R++   TA
Sbjct: 592 ADKVQLNKRTLTQMKEKRKDELLQKTVITPEFEKNYCVPPYSESKYKLQKKRRQERQKTA 651

Query: 195 GRNWFDMPAQTVTPEVEKDLRLLK------------------------VGTVVESSLDFF 254
           G  WF M A  +T E++ DL+ LK                        +GT+V++  DF+
Sbjct: 652 GDGWFGMKAPELTDELKNDLKALKMRASMDPKRFYKKNDRDGFPKYFQIGTIVDNPADFY 711

Query: 255 TGRLTKKERKATLADELLSDQALTQYRKRKVQEI 261
             R+ KK+RK T+ +ELL+D    +Y +RK  EI
Sbjct: 712 HSRVPKKQRKRTIVEELLADSEFRRYNRRKYSEI 745

[Close]
BLAST of Cla97C06G111400 vs. ExPASy Swiss-Prot
Match: Q8R2M2 (Deoxynucleotidyltransferase terminal-interacting protein 2 OS=Mus musculus OX=10090 GN=Dnttip2 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.0e-10
Identity = 42/117 (35.90%), Postives = 58/117 (49.57%), Query Frame = 0 

Query: 170 VPPNKPKK--LNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLK------------- 229
           VPP    K  L K  RK+   TAG  WF M A  +T E++ DLR LK             
Sbjct: 621 VPPYSESKHRLQKQRRKERQKTAGNGWFGMKAPELTDELKNDLRALKMRAGMDPKRFYKK 680

Query: 230 -----------VGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEI 261
                      VGT+V++  DF+  R+ KK+RK T+ +ELL+D    ++ +RK  EI
Sbjct: 681 NDRDGFPKYFQVGTIVDNPADFYHSRIPKKQRKKTIVEELLADSEFRRFNRRKYSEI 737

[Close]
BLAST of Cla97C06G111400 vs. ExPASy Swiss-Prot
Match: Q5QJE6 (Deoxynucleotidyltransferase terminal-interacting protein 2 OS=Homo sapiens OX=9606 GN=DNTTIP2 PE=1 SV=2)

HSP 1 Score: 68.2 bits (165), Expect = 1.8e-10
Identity = 47/154 (30.52%), Postives = 70/154 (45.45%), Query Frame = 0 

Query: 135 ASSLGVRTKTCDKSNSQAENSLVWKT--NSELVDGLFVPPNKPKK--LNKLLRKQVSDTA 194
           A  L    +T  +   + +N L+ K     +      VPP    K  L K  RK+   TA
Sbjct: 582 ADKLQSNKRTLTQIKEKKKNELLQKAVITPDFEKNHCVPPYSESKYQLQKKRRKERQKTA 641

Query: 195 GRNWFDMPAQTVTPEVEKDLRLLK------------------------VGTVVESSLDFF 254
           G  WF M A  +T E++ DL+ LK                        +GT+V++  DF+
Sbjct: 642 GDGWFGMKAPEMTNELKNDLKALKMRASMDPKRFYKKNDRDGFPKYFQIGTIVDNPADFY 701

Query: 255 TGRLTKKERKATLADELLSDQALTQYRKRKVQEI 261
             R+ KK+RK T+ +ELL+D    +Y +RK  EI
Sbjct: 702 HSRIPKKQRKRTIVEELLADSEFRRYNRRKYSEI 735

[Close]
BLAST of Cla97C06G111400 vs. ExPASy Swiss-Prot
Match: Q12035 (rRNA-processing protein FCF2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=FCF2 PE=1 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 4.2e-04
Identity = 23/68 (33.82%), Postives = 42/68 (61.76%), Query Frame = 0 

Query: 215 VGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQNRPAGNDKWKI 274
           +GT++E   +F++ R+ +KERK+T+ + L+ D+A  +Y KRK  EI+E++       +K 
Sbjct: 149 IGTIIEDKSEFYSSRMNRKERKSTILETLMGDEASNKYFKRKYNEIQEKSTSGRKAHYKK 208

Query: 275 RGRHSQKR 283
                +KR
Sbjct: 209 MKEMRKKR 216

[Close]
BLAST of Cla97C06G111400 vs. ExPASy TrEMBL
Match: A0A1S3CB58 (rRNA-processing protein fcf2 OS=Cucumis melo OX=3656 GN=LOC103498854 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 3.0e-77
Identity = 155/196 (79.08%), Postives = 165/196 (84.18%), Query Frame = 0 

Query: 118 MSERKPIIGLSWEPKLPASSLGVRTKTCDKSNSQAENSLVWKTNSELVDGLFVPPNKPKK 177
           MSERKPIIGLSWEPKLPASS G++TKTCDKSN+QAEN +VWK+NSELVDGLFVPPN PKK
Sbjct: 1   MSERKPIIGLSWEPKLPASSSGIKTKTCDKSNNQAENGIVWKSNSELVDGLFVPPNNPKK 60

Query: 178 LNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLK----------------------- 237
           LNKLLRKQVSDTAGRNWFDMPA+T+TPEVEKDLRLLK                       
Sbjct: 61  LNKLLRKQVSDTAGRNWFDMPAKTMTPEVEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120

Query: 238 ---VGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQNRPAGNDK 288
              VGTVVESSLDFF+GRLTKKERKATLADELLSDQALTQYRKRKV+EIEEQNRP GNDK
Sbjct: 121 YFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEEQNRPGGNDK 180

[Close]
BLAST of Cla97C06G111400 vs. ExPASy TrEMBL
Match: A0A0A0K9M7 (Fcf2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G094730 PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 5.6e-76
Identity = 154/196 (78.57%), Postives = 163/196 (83.16%), Query Frame = 0 

Query: 118 MSERKPIIGLSWEPKLPASSLGVRTKTCDKSNSQAENSLVWKTNSELVDGLFVPPNKPKK 177
           MS+ KPIIGLSWEPKLPASS G++ KTCDKSNSQAEN LVWK+NSELVDGLFVPPN PKK
Sbjct: 1   MSKGKPIIGLSWEPKLPASSSGIKAKTCDKSNSQAENGLVWKSNSELVDGLFVPPNNPKK 60

Query: 178 LNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLK----------------------- 237
           LNKLLRKQVSDTAGRNWFDMPA+T+TPEVEKDLRLLK                       
Sbjct: 61  LNKLLRKQVSDTAGRNWFDMPAKTMTPEVEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120

Query: 238 ---VGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQNRPAGNDK 288
              VGTVVESSLDFF+GRLTKKERKATLADELLSDQALTQYRKRKV+EIEEQNRP GNDK
Sbjct: 121 YFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEEQNRPGGNDK 180

[Close]
BLAST of Cla97C06G111400 vs. ExPASy TrEMBL
Match: A0A6J1KU17 (rRNA-processing protein fcf2-like OS=Cucurbita maxima OX=3661 GN=LOC111498206 PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 6.9e-74
Identity = 150/197 (76.14%), Postives = 161/197 (81.73%), Query Frame = 0 

Query: 117 VMSERKPIIGLSWEPKLPASSLGVRTKTCDKSNSQAENSLVWKTNSELVDGLFVPPNKPK 176
           +MS +KP+I LSWEPKLP SS G++TK CDKS+SQAEN LVWK NSELVDGLFVPPN PK
Sbjct: 1   MMSGKKPVISLSWEPKLPTSSSGIKTKACDKSHSQAENGLVWKNNSELVDGLFVPPNNPK 60

Query: 177 KLNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLK---------------------- 236
           KLNKLLRKQVSDTAGR+WFDMPAQT+TPE+EKDLRLLK                      
Sbjct: 61  KLNKLLRKQVSDTAGRSWFDMPAQTMTPEMEKDLRLLKLRSVIDPKRHYKKGDSKSKTLP 120

Query: 237 ----VGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQNRPAGND 288
               VGTVVESSLDFF+GRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQNRP GND
Sbjct: 121 KYFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQNRPGGND 180

[Close]
BLAST of Cla97C06G111400 vs. ExPASy TrEMBL
Match: A0A6J1DMD6 (rRNA-processing protein fcf2 OS=Momordica charantia OX=3673 GN=LOC111022552 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 2.0e-73
Identity = 149/196 (76.02%), Postives = 163/196 (83.16%), Query Frame = 0 

Query: 118 MSERKPIIGLSWEPKLPASSLGVRTKTCDKSNSQAENSLVWKTNSELVDGLFVPPNKPKK 177
           MSE+KP+IGLSWEPKL  SS G++TKTCDKS+ Q E+SLVWKTN+ELVDGLFVPPN PKK
Sbjct: 1   MSEKKPVIGLSWEPKLATSSSGIKTKTCDKSHIQPESSLVWKTNTELVDGLFVPPNNPKK 60

Query: 178 LNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLK----------------------- 237
           LNKLLRKQVSDTAGR+WFDMPAQT+TPE+EKDLRLLK                       
Sbjct: 61  LNKLLRKQVSDTAGRSWFDMPAQTMTPELEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120

Query: 238 ---VGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQNRPAGNDK 288
              VGTVVESSLDFF+GRLTKKERKATLADELLSDQALTQYRKRKV+EIEE NRPAGNDK
Sbjct: 121 YFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEELNRPAGNDK 180

[Close]
BLAST of Cla97C06G111400 vs. ExPASy TrEMBL
Match: A0A6J1H9T2 (rRNA-processing protein fcf2-like OS=Cucurbita moschata OX=3662 GN=LOC111460917 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 4.4e-73
Identity = 149/196 (76.02%), Postives = 159/196 (81.12%), Query Frame = 0 

Query: 118 MSERKPIIGLSWEPKLPASSLGVRTKTCDKSNSQAENSLVWKTNSELVDGLFVPPNKPKK 177
           MS +KP+I LSWEPKLP SS G++TK CDKS+SQA N LVWK NSELVDGLFVPPN PKK
Sbjct: 1   MSGKKPVISLSWEPKLPTSSSGIKTKACDKSHSQAGNGLVWKNNSELVDGLFVPPNNPKK 60

Query: 178 LNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLK----------------------- 237
           LNKLLRKQVSDTAGRNWFDMPAQT+TPE+EKDLRLLK                       
Sbjct: 61  LNKLLRKQVSDTAGRNWFDMPAQTMTPEMEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120

Query: 238 ---VGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQNRPAGNDK 288
              VGTVVESSLDFF+GRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQNRP GNDK
Sbjct: 121 YFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQNRPGGNDK 180

[Close]
BLAST of Cla97C06G111400 vs. TAIR 10
Match: AT5G30495.2 (Fcf2 pre-rRNA processing protein )

HSP 1 Score: 183.3 bits (464), Expect = 2.7e-46
Identity = 100/198 (50.51%), Postives = 133/198 (67.17%), Query Frame = 0 

Query: 118 MSERKPIIGLSWEPKLPASSLGVRTKTCDKSNSQA---ENSLVWKTNSELVDGLFVPPNK 177
           M+E KP+IGL+WEPKLP  SL   TKTC  S+ +    E+S +W + SELVDGL +PPN 
Sbjct: 1   MAETKPLIGLTWEPKLPGLSLD--TKTCSTSSKRVESHESSSLWMSKSELVDGLCLPPND 60

Query: 178 PKKLNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLK-------------------- 237
           PKK+NK++RKQ+ DT G NWFDMPA T+TPE+++DL+LLK                    
Sbjct: 61  PKKINKMIRKQIKDTTGSNWFDMPAPTMTPELKRDLQLLKLRTVMDPAVHYKKSVSRSKL 120

Query: 238 ------VGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQNRPAG 287
                 +GTV+E + +F+ GRLTKK RKATLADEL+SD  ++QYRKRKV+EIEE++R   
Sbjct: 121 AEKYFQIGTVIEPAEEFY-GRLTKKNRKATLADELVSDPKVSQYRKRKVKEIEEKSRAVT 180

[Close]
BLAST of Cla97C06G111400 vs. TAIR 10
Match: AT5G30495.1 (Fcf2 pre-rRNA processing protein )

HSP 1 Score: 183.3 bits (464), Expect = 2.7e-46
Identity = 100/198 (50.51%), Postives = 133/198 (67.17%), Query Frame = 0 

Query: 118 MSERKPIIGLSWEPKLPASSLGVRTKTCDKSNSQA---ENSLVWKTNSELVDGLFVPPNK 177
           M+E KP+IGL+WEPKLP  SL   TKTC  S+ +    E+S +W + SELVDGL +PPN 
Sbjct: 1   MAETKPLIGLTWEPKLPGLSLD--TKTCSTSSKRVESHESSSLWMSKSELVDGLCLPPND 60

Query: 178 PKKLNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLK-------------------- 237
           PKK+NK++RKQ+ DT G NWFDMPA T+TPE+++DL+LLK                    
Sbjct: 61  PKKINKMIRKQIKDTTGSNWFDMPAPTMTPELKRDLQLLKLRTVMDPAVHYKKSVSRSKL 120

Query: 238 ------VGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQNRPAG 287
                 +GTV+E + +F+ GRLTKK RKATLADEL+SD  ++QYRKRKV+EIEE++R   
Sbjct: 121 AEKYFQIGTVIEPAEEFY-GRLTKKNRKATLADELVSDPKVSQYRKRKVKEIEEKSRAVT 180

[Close]
BLAST of Cla97C06G111400 vs. TAIR 10
Match: AT1G54770.1 (Fcf2 pre-rRNA processing protein )

HSP 1 Score: 160.6 bits (405), Expect = 1.9e-39
Identity = 90/192 (46.88%), Postives = 121/192 (63.02%), Query Frame = 0 

Query: 121 RKPIIGLSWEPKLPASSLGVRTKTCDKSNSQAENSLVWKTNSELVDGLFVPPNKPKKLNK 180
           ++P+IGL WEPKLP  SL ++T +     +++       + SELVDGL +PPN P+K+NK
Sbjct: 5   KQPLIGLKWEPKLPGLSLDLKTGSTRSKTAES-------SKSELVDGLCLPPNDPRKINK 64

Query: 181 LLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLKVGTVVESSLDF--------------- 240
           ++RKQ+ DT G NWFDMPA T+TPE+++DL+LLK+ TV++ +L +               
Sbjct: 65  MIRKQLKDTTGSNWFDMPAPTMTPELKRDLQLLKLRTVMDPALHYKKSVSRSKLAEKYFQ 124

Query: 241 ----------FTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQNRPAGNDKWKIR 288
                     F GRLTKK RKATLADEL+SD     YRKRKV+EIEE++R   N KW  +
Sbjct: 125 IGTVIEPAEEFYGRLTKKNRKATLADELVSDPKTALYRKRKVREIEEKSRAVTNKKWNKK 184

The following BLAST results are available for this feature:
BLAST of Cla97C06G111400 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038876081.11.9e-7881.12rRNA-processing protein fcf2 [Benincasa hispida] >XP_038876082.1 rRNA-processing... [more]
XP_008459856.16.2e-7779.08PREDICTED: rRNA-processing protein fcf2 [Cucumis melo][more]
XP_011656806.11.2e-7578.57rRNA-processing protein fcf2 [Cucumis sativus] >KGN46455.1 hypothetical protein ... [more]
XP_023005116.11.4e-7376.14rRNA-processing protein fcf2-like [Cucurbita maxima][more]
XP_022155405.14.1e-7376.02rRNA-processing protein fcf2 [Momordica charantia][more]
BLAST of Cla97C06G111400 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O428774.7e-1135.11rRNA-processing protein fcf2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
Q0P5H21.0e-1029.87Deoxynucleotidyltransferase terminal-interacting protein 2 OS=Bos taurus OX=9913... [more]
Q8R2M21.0e-1035.90Deoxynucleotidyltransferase terminal-interacting protein 2 OS=Mus musculus OX=10... [more]
Q5QJE61.8e-1030.52Deoxynucleotidyltransferase terminal-interacting protein 2 OS=Homo sapiens OX=96... [more]
Q120354.2e-0433.82rRNA-processing protein FCF2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S... [more]
BLAST of Cla97C06G111400 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3CB583.0e-7779.08rRNA-processing protein fcf2 OS=Cucumis melo OX=3656 GN=LOC103498854 PE=4 SV=1[more]
A0A0A0K9M75.6e-7678.57Fcf2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G094730 PE=4 S... [more]
A0A6J1KU176.9e-7476.14rRNA-processing protein fcf2-like OS=Cucurbita maxima OX=3661 GN=LOC111498206 PE... [more]
A0A6J1DMD62.0e-7376.02rRNA-processing protein fcf2 OS=Momordica charantia OX=3673 GN=LOC111022552 PE=4... [more]
A0A6J1H9T24.4e-7376.02rRNA-processing protein fcf2-like OS=Cucurbita moschata OX=3662 GN=LOC111460917 ... [more]
BLAST of Cla97C06G111400 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G30495.22.7e-4650.51Fcf2 pre-rRNA processing protein [more]
AT5G30495.12.7e-4650.51Fcf2 pre-rRNA processing protein [more]
AT1G54770.11.9e-3946.88Fcf2 pre-rRNA processing protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014810Fcf2 pre-rRNA processing, C-terminalPFAMPF08698Fcf2coord: 188..214
e-value: 8.5E-6
score: 26.0
coord: 214..256
e-value: 8.7E-10
score: 38.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 259..288
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 259..274
IPR039883Fcf2/DNTTIP2PANTHERPTHR21686UNCHARACTERIZEDcoord: 215..283
coord: 123..215

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C06G111400.2Cla97C06G111400.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006396 RNA processing
cellular_component GO:0005730 nucleolus