Cla97C06G109810 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C06G109810
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	50S ribosomal protein L3
Location	Cla97Chr06: 504125 .. 506247 (+)
RNA-Seq Expression	Cla97C06G109810
Synteny	Cla97C06G109810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTATCATATCATTTTCATCAGCTTCAACCTCATCCAGATATCCAATTTTCACCAACAATGCTTCTTCTTCTTCTTCATTTTCCTCCACTTCTTCATCTCTGACACTCAGGACATCTTTCCTCGCCCTTCCTCTGAAATCCCGCCGCAGCAACAACCTTCGTCTCCAATTTCCGACACGAAGAACCACTAGACGTCCTAACGACGGCCTCTCCGTTTGTATGAGCATGGAGGCCGGCATTGGCGTCATGGCCACCAAGCTCGGTATGATGAGCTTCTTCGAGCCCGACGGCAAGGTCGTCCCTGTCACGGTGGTTGGTTTCAAGGAAGGCAACATCGTCACGCAGGTTAAGACGGAGGCGACTGACGGCTATAGTTCCGTTCAGGTTGGGTACCGTAGGGTTAGGGATCGGAAATTGACGAAACCGGAATTGGGGCATCTCCAGAAAGCTGGAGCGATTCCAATGCGCCATTTGCAGGAGTTTCGTCTTGAGTCTGTTGATGGATTTGAGCCCAATCAGCGCCTAGTTTTCAATGAACTTTTCAAGGAGGGCGACCTGGTTGATGTCTCGGGCACTACAATTGGAAAGGGATTTCAAGGTTCTTATGTTTCTTGCTTATTCTATTTGAAGTCTATGTTTTAGTTGCGAAATTGCCTTGGTCTTCTGTTTTCCTTGGAGCTTATGGGATTTCGTTCTGTGCCTGCACAATGTTGGAGTTGAGTCTAGGCATGCTCATGAAGGATTAAACATGAAATTTCATTGATATTCTTGCTGTTTGAACACAGAATGACATATACAATTCCAAAGCTTGAACCAGTCTTCTAATTTTTGTTTTATCATCTATGCCTGCATAATGTTAGAGTTGAATTTAGGCATGCTCAGGAAGGATTAAACATGAATTTTAATTGATATATATTTGCTGTTTGAACACACAATGACATATACTATTCCCAAGCCTGAACCAGTCTTCCATGAAAGAAGCTGTCTAGAATTTCTAATCTCCAGGTATTGAATGTCAGGATATGATACTTTTATGTGTGCAAATATTTTGCTAGTTATGTGTGTGGATAAGGATGTGTCTGTGCTATCTTGGCAAGCTTTCATTGCAAAACACATTCATTGTCATCCCTTGTCATGGTAGACACCATAAGATTGTGTTCATATGATATCGTGTTAAATCACCATTAAACATGAGAGCAGAGCTTAAGTCAAACTTTATGGTAGGTTTTTATAATTTAATATGTTCTCAACACCCTTAGTGTGTAAACTTAGATATTAATTTGATTTACAAGACCCAACAACATGTGGACTATTAATGTAAAGTTAGAAGAAAACTAATACATAATACATACATAGTAAATTTCAGGCTAAATTACAAAAGAATACTTTTGAACCTTGTCCTTTGTATCAATCATACTCTTATTCTTTCAAAAGTTGCAATATTACTCTAGACCTTTCATAAACCTTTCAAAAGTACTTTTAGAGTAAAAATCCTTTAGAATTATGGACAAAATTGTGACGTGGAATGTTGTGACTGTAACCTAGAATGACATGCAATCCAAATTTTCGTTCTAAGTTACCGCCACATCATTTCCGGTCTTAATATCTATTTGACATTCATTTCTACTTCTAGGTTAGTTTTGAAAAGTTTACAAAATGTCAAGGATGGTATTGCAACTTTTGAAAGAATAAGAGTATTTTTAACAAATGATAAAGTTTGGAGTATTCTTTACAATTTAACCTAAATTTTAGCCATCTTATGTGTTCTCCACCTCGTTTCAACAACTCTAACTGGTTTCTTGTAAAATTCTCTCTCTAATTTGACTCTAGGTGGAATCAAGAGGCACAACTTCAAAAGGGGTCCGATGACCCACGGTTCCAAGAGTCACAGAGCACTTGGATCAATCGGTGCAGGAACTACACCGGGGCGTGTTTACAAGGGGAAGAAGATGCCTGGAAGGATGGGAGGAACCAAGAGAAAAATCAGAAAACTTAGGATTGTAAAGATTGACGAGGACCTTAATGTTGTGATGATCAAAGGCGCCGTCCCAGGTAAGCCAGGAAACCTCCTTCGTATAGCTCCTGCAAAGATAGTAGGAAAGAACATTCCTAAGAACTAG

mRNA sequence

ATGTCTATCATATCATTTTCATCAGCTTCAACCTCATCCAGATATCCAATTTTCACCAACAATGCTTCTTCTTCTTCTTCATTTTCCTCCACTTCTTCATCTCTGACACTCAGGACATCTTTCCTCGCCCTTCCTCTGAAATCCCGCCGCAGCAACAACCTTCGTCTCCAATTTCCGACACGAAGAACCACTAGACGTCCTAACGACGGCCTCTCCGTTTGTATGAGCATGGAGGCCGGCATTGGCGTCATGGCCACCAAGCTCGGTATGATGAGCTTCTTCGAGCCCGACGGCAAGGTCGTCCCTGTCACGGTGGTTGGTTTCAAGGAAGGCAACATCGTCACGCAGGTTAAGACGGAGGCGACTGACGGCTATAGTTCCGTTCAGGTTGGGTACCGTAGGGTTAGGGATCGGAAATTGACGAAACCGGAATTGGGGCATCTCCAGAAAGCTGGAGCGATTCCAATGCGCCATTTGCAGGAGTTTCGTCTTGAGTCTGTTGATGGATTTGAGCCCAATCAGCGCCTAGTTTTCAATGAACTTTTCAAGGAGGGCGACCTGGTTGATGTCTCGGGCACTACAATTGGAAAGGGATTTCAAGGTTCTTATTTATGTGTGTGGATAAGGATGTGTCTGTGCTATCTTGGCAAGCTTTCATTGCAAAACACATTCATTGTCATCCCTTGTCATGGTGGAATCAAGAGGCACAACTTCAAAAGGGGTCCGATGACCCACGGTTCCAAGAGTCACAGAGCACTTGGATCAATCGGTGCAGGAACTACACCGGGGCGTGTTTACAAGGGGAAGAAGATGCCTGGAAGGATGGGAGGAACCAAGAGAAAAATCAGAAAACTTAGGATTGTAAAGATTGACGAGGACCTTAATGTTGTGATGATCAAAGGCGCCGTCCCAGGTAAGCCAGGAAACCTCCTTCGTATAGCTCCTGCAAAGATAGTAGGAAAGAACATTCCTAAGAACTAG

Coding sequence (CDS)

ATGTCTATCATATCATTTTCATCAGCTTCAACCTCATCCAGATATCCAATTTTCACCAACAATGCTTCTTCTTCTTCTTCATTTTCCTCCACTTCTTCATCTCTGACACTCAGGACATCTTTCCTCGCCCTTCCTCTGAAATCCCGCCGCAGCAACAACCTTCGTCTCCAATTTCCGACACGAAGAACCACTAGACGTCCTAACGACGGCCTCTCCGTTTGTATGAGCATGGAGGCCGGCATTGGCGTCATGGCCACCAAGCTCGGTATGATGAGCTTCTTCGAGCCCGACGGCAAGGTCGTCCCTGTCACGGTGGTTGGTTTCAAGGAAGGCAACATCGTCACGCAGGTTAAGACGGAGGCGACTGACGGCTATAGTTCCGTTCAGGTTGGGTACCGTAGGGTTAGGGATCGGAAATTGACGAAACCGGAATTGGGGCATCTCCAGAAAGCTGGAGCGATTCCAATGCGCCATTTGCAGGAGTTTCGTCTTGAGTCTGTTGATGGATTTGAGCCCAATCAGCGCCTAGTTTTCAATGAACTTTTCAAGGAGGGCGACCTGGTTGATGTCTCGGGCACTACAATTGGAAAGGGATTTCAAGGTTCTTATTTATGTGTGTGGATAAGGATGTGTCTGTGCTATCTTGGCAAGCTTTCATTGCAAAACACATTCATTGTCATCCCTTGTCATGGTGGAATCAAGAGGCACAACTTCAAAAGGGGTCCGATGACCCACGGTTCCAAGAGTCACAGAGCACTTGGATCAATCGGTGCAGGAACTACACCGGGGCGTGTTTACAAGGGGAAGAAGATGCCTGGAAGGATGGGAGGAACCAAGAGAAAAATCAGAAAACTTAGGATTGTAAAGATTGACGAGGACCTTAATGTTGTGATGATCAAAGGCGCCGTCCCAGGTAAGCCAGGAAACCTCCTTCGTATAGCTCCTGCAAAGATAGTAGGAAAGAACATTCCTAAGAACTAG

Protein sequence

MSIISFSSASTSSRYPIFTNNASSSSSFSSTSSSLTLRTSFLALPLKSRRSNNLRLQFPTRRTTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEATDGYSSVQVGYRRVRDRKLTKPELGHLQKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKEGDLVDVSGTTIGKGFQGSYLCVWIRMCLCYLGKLSLQNTFIVIPCHGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLRIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN

Homology

[Close]

BLAST of Cla97C06G109810 vs. NCBI nr
Match: XP_038876222.1 (50S ribosomal protein L3, chloroplastic [Benincasa hispida])

HSP 1 Score: 521.2 bits (1341), Expect = 6.6e-144
Identity = 280/326 (85.89%), Postives = 286/326 (87.73%), Query Frame = 0


Query: 1   MSIISFSSASTSSRYPIFTNNASSSSSFSSTSSSLTLRTSFLALPLKSRRSNNLRLQFPT 60
           MSIISFSSASTS+R+PIF NNASSSSSFSSTSSSLTLRTSFLALP+     NNLRLQFPT
Sbjct: 1   MSIISFSSASTSARHPIFANNASSSSSFSSTSSSLTLRTSFLALPMNPHHKNNLRLQFPT 60

Query: 61  RRTTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTE 120
           RRTTRRPN+ LSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTE
Sbjct: 61  RRTTRRPNNALSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTE 120

Query: 121 ATDGYSSVQVGYRRVRDRKLTKPELGHLQKAGAIPMRHLQEFRLESVDGFEPNQRLVFNE 180
           ATDGYS+VQVGYRRVRDRKLTKPELGHLQKAGAIPMRHLQEFRLESV GFE NQ LVFNE
Sbjct: 121 ATDGYSAVQVGYRRVRDRKLTKPELGHLQKAGAIPMRHLQEFRLESVGGFESNQSLVFNE 180

Query: 181 LFKEGDLVDVSGTTIGKGFQGSYLCVWIRMCLCYLGKLSLQNTFIVIPCHGGIKRHNFKR 240
           LFKEGDLVDVSGTTIGKGFQ                              GGIKRHNFKR
Sbjct: 181 LFKEGDLVDVSGTTIGKGFQ------------------------------GGIKRHNFKR 240

Query: 241 GPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLRIVKIDEDLNVVMIK 300
           GPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKL+IVKIDEDLNVVMIK
Sbjct: 241 GPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKIDEDLNVVMIK 296

Query: 301 GAVPGKPGNLLRIAPAKIVGKNIPKN 327
           GAVPGKPGNLLRIAPAKIVGKNIPKN
Sbjct: 301 GAVPGKPGNLLRIAPAKIVGKNIPKN 296

[Close]

BLAST of Cla97C06G109810 vs. NCBI nr
Match: XP_008460096.1 (PREDICTED: 50S ribosomal protein L3, chloroplastic [Cucumis melo])

HSP 1 Score: 515.8 bits (1327), Expect = 2.8e-142
Identity = 277/326 (84.97%), Postives = 286/326 (87.73%), Query Frame = 0


Query: 1   MSIISFSSASTSSRYPIFTNNASSSSSFSSTSSSLTLRTSFLALPLKSRRSNNLRLQFPT 60
           MSIISFSSAS S+++PIFTNN SSS   SS+SSSLTLRTSFLALPLKS   NNLR  FPT
Sbjct: 1   MSIISFSSASASTKHPIFTNNPSSS---SSSSSSLTLRTSFLALPLKSHHKNNLRFHFPT 60

Query: 61  RRTTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTE 120
           RRTTRRP+DGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTE
Sbjct: 61  RRTTRRPSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTE 120

Query: 121 ATDGYSSVQVGYRRVRDRKLTKPELGHLQKAGAIPMRHLQEFRLESVDGFEPNQRLVFNE 180
           ATDGYS+VQVGYRRVRDRKLTKPELGHL+KAGAIPMRHLQEFRLESVDGFEPNQRLVFNE
Sbjct: 121 ATDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNE 180

Query: 181 LFKEGDLVDVSGTTIGKGFQGSYLCVWIRMCLCYLGKLSLQNTFIVIPCHGGIKRHNFKR 240
           LFKEGDLVDVSGTTIGKGFQ                              GGIKRHNFKR
Sbjct: 181 LFKEGDLVDVSGTTIGKGFQ------------------------------GGIKRHNFKR 240

Query: 241 GPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLRIVKIDEDLNVVMIK 300
           GPM+HGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKL+IVKIDEDLNVVMIK
Sbjct: 241 GPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKIDEDLNVVMIK 293

Query: 301 GAVPGKPGNLLRIAPAKIVGKNIPKN 327
           GAVPGKPGNLLRIAPAKIVGKNIPKN
Sbjct: 301 GAVPGKPGNLLRIAPAKIVGKNIPKN 293

[Close]

BLAST of Cla97C06G109810 vs. NCBI nr
Match: KAG6574805.1 (50S ribosomal protein L3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013387.1 50S ribosomal protein L3, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 515.0 bits (1325), Expect = 4.7e-142
Identity = 275/326 (84.36%), Postives = 285/326 (87.42%), Query Frame = 0


Query: 1   MSIISFSSASTSSRYPIFTNNASSSSSFSSTSSSLTLRTSFLALPLKSRRSNNLRLQFPT 60
           MS+IS SSASTS+R+PIFTNNASS    SS SSSL LRTSFLALPLKS R+NNLR QFP 
Sbjct: 1   MSVISISSASTSNRHPIFTNNASS----SSPSSSLKLRTSFLALPLKSHRNNNLRFQFPR 60

Query: 61  RRTTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTE 120
            RTTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQ+KTE
Sbjct: 61  PRTTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQIKTE 120

Query: 121 ATDGYSSVQVGYRRVRDRKLTKPELGHLQKAGAIPMRHLQEFRLESVDGFEPNQRLVFNE 180
           ATDGYS+VQVGYRRVRDRKLTKPE+GHLQKAGAIPMRHLQEFRLES+DGFEPNQRLVFNE
Sbjct: 121 ATDGYSAVQVGYRRVRDRKLTKPEMGHLQKAGAIPMRHLQEFRLESIDGFEPNQRLVFNE 180

Query: 181 LFKEGDLVDVSGTTIGKGFQGSYLCVWIRMCLCYLGKLSLQNTFIVIPCHGGIKRHNFKR 240
           LFKEGDLVDVSGTTIGKGFQ                              GGIKRHNFKR
Sbjct: 181 LFKEGDLVDVSGTTIGKGFQ------------------------------GGIKRHNFKR 240

Query: 241 GPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLRIVKIDEDLNVVMIK 300
           GPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKL+IVKID+DLNVVMIK
Sbjct: 241 GPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKIDDDLNVVMIK 292

Query: 301 GAVPGKPGNLLRIAPAKIVGKNIPKN 327
           GAVPGKPGNLLRIAPAKIVGKNIPKN
Sbjct: 301 GAVPGKPGNLLRIAPAKIVGKNIPKN 292

[Close]

BLAST of Cla97C06G109810 vs. NCBI nr
Match: XP_023006396.1 (50S ribosomal protein L3, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 513.5 bits (1321), Expect = 1.4e-141
Identity = 274/326 (84.05%), Postives = 284/326 (87.12%), Query Frame = 0


Query: 1   MSIISFSSASTSSRYPIFTNNASSSSSFSSTSSSLTLRTSFLALPLKSRRSNNLRLQFPT 60
           MS+IS SSASTS R+PIFTNNASS    SS SSSL LRTSFLALPLKS R+NN+R QFP 
Sbjct: 1   MSVISISSASTSKRHPIFTNNASS----SSPSSSLKLRTSFLALPLKSHRNNNVRFQFPR 60

Query: 61  RRTTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTE 120
            RTTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQ+KTE
Sbjct: 61  PRTTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQIKTE 120

Query: 121 ATDGYSSVQVGYRRVRDRKLTKPELGHLQKAGAIPMRHLQEFRLESVDGFEPNQRLVFNE 180
           ATDGYS+VQVGYRRVRDRKLTKPE+GHLQKAGAIPMRHLQEFRLES+DGFEPNQRLVFNE
Sbjct: 121 ATDGYSAVQVGYRRVRDRKLTKPEMGHLQKAGAIPMRHLQEFRLESIDGFEPNQRLVFNE 180

Query: 181 LFKEGDLVDVSGTTIGKGFQGSYLCVWIRMCLCYLGKLSLQNTFIVIPCHGGIKRHNFKR 240
           LFKEGDLVDVSGTTIGKGFQ                              GGIKRHNFKR
Sbjct: 181 LFKEGDLVDVSGTTIGKGFQ------------------------------GGIKRHNFKR 240

Query: 241 GPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLRIVKIDEDLNVVMIK 300
           GPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKL+IVKID+DLNVVMIK
Sbjct: 241 GPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKIDDDLNVVMIK 292

Query: 301 GAVPGKPGNLLRIAPAKIVGKNIPKN 327
           GAVPGKPGNLLRIAPAKIVGKNIPKN
Sbjct: 301 GAVPGKPGNLLRIAPAKIVGKNIPKN 292

[Close]

BLAST of Cla97C06G109810 vs. NCBI nr
Match: KAA0039986.1 (50S ribosomal protein L3 [Cucumis melo var. makuwa])

HSP 1 Score: 512.7 bits (1319), Expect = 2.3e-141
Identity = 276/326 (84.66%), Postives = 285/326 (87.42%), Query Frame = 0


Query: 1   MSIISFSSASTSSRYPIFTNNASSSSSFSSTSSSLTLRTSFLALPLKSRRSNNLRLQFPT 60
           MSIISFSSAS S+++PIFTNN SSS   SS+SSSLTLRTSFLALPLKS   NNLR  F T
Sbjct: 1   MSIISFSSASASTKHPIFTNNPSSS---SSSSSSLTLRTSFLALPLKSHHKNNLRFHFAT 60

Query: 61  RRTTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTE 120
           RRTTRRP+DGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTE
Sbjct: 61  RRTTRRPSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTE 120

Query: 121 ATDGYSSVQVGYRRVRDRKLTKPELGHLQKAGAIPMRHLQEFRLESVDGFEPNQRLVFNE 180
           ATDGYS+VQVGYRRVRDRKLTKPELGHL+KAGAIPMRHLQEFRLESVDGFEPNQRLVFNE
Sbjct: 121 ATDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNE 180

Query: 181 LFKEGDLVDVSGTTIGKGFQGSYLCVWIRMCLCYLGKLSLQNTFIVIPCHGGIKRHNFKR 240
           LFKEGDLVDVSGTTIGKGFQ                              GGIKRHNFKR
Sbjct: 181 LFKEGDLVDVSGTTIGKGFQ------------------------------GGIKRHNFKR 240

Query: 241 GPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLRIVKIDEDLNVVMIK 300
           GPM+HGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKL+IVKIDEDLNVVMIK
Sbjct: 241 GPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKIDEDLNVVMIK 293

Query: 301 GAVPGKPGNLLRIAPAKIVGKNIPKN 327
           GAVPGKPGNLLRIAPAKIVGKNIPKN
Sbjct: 301 GAVPGKPGNLLRIAPAKIVGKNIPKN 293

[Close]

BLAST of Cla97C06G109810 vs. ExPASy Swiss-Prot
Match: O80360 (50S ribosomal protein L3, chloroplastic (Fragment) OS=Nicotiana tabacum OX=4097 GN=RPL3 PE=2 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 1.1e-104
Identity = 203/296 (68.58%), Postives = 230/296 (77.70%), Query Frame = 0


Query: 32  SSSLTLRTSFL-ALPLKSRRSNNLRLQFPTRRTTRRPNDGLSVCMSMEAGIGVMATKLGM 91
           ++ LTLR+ FL  LPL++ +         T + T       S+  S+EAG+GVMATKLGM
Sbjct: 3   TTPLTLRSPFLHRLPLRALK---------THKPTSLHISKSSISASLEAGVGVMATKLGM 62

Query: 92  MSFFEPDGKVVPVTVVGFKEGNIVTQVKTEATDGYSSVQVGYRRVRDRKLTKPELGHLQK 151
           MSFFE  G VVPVTVVGF+EGNIVTQ+KTEATDGY++VQVGYRRVRDRKLTKPE+GHL+K
Sbjct: 63  MSFFEESGTVVPVTVVGFREGNIVTQIKTEATDGYNAVQVGYRRVRDRKLTKPEMGHLEK 122

Query: 152 AGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKEGDLVDVSGTTIGKGFQGSYLCVWIRM 211
           +G IP+RHLQEFRL+S+DGFE  Q+L F ELFKEGDLVDVSGTTIGKGFQ          
Sbjct: 123 SGIIPLRHLQEFRLQSIDGFEVTQKLDFGELFKEGDLVDVSGTTIGKGFQ---------- 182

Query: 212 CLCYLGKLSLQNTFIVIPCHGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKK 271
                               GGIKRHNFKRG MTHGSKSHR LGSIGAGTTPGRVYKGKK
Sbjct: 183 --------------------GGIKRHNFKRGQMTHGSKSHRQLGSIGAGTTPGRVYKGKK 242

Query: 272 MPGRMGGTKRKIRKLRIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 327
           MPGRMGGTKRKIRKL+IVKID+ LN++MIKGA+PGKPGNLLRIAPAKIVGKNIPK+
Sbjct: 243 MPGRMGGTKRKIRKLKIVKIDDQLNIIMIKGALPGKPGNLLRIAPAKIVGKNIPKS 259

[Close]

BLAST of Cla97C06G109810 vs. ExPASy Swiss-Prot
Match: Q9SKX4 (50S ribosomal protein L3-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL3A PE=2 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 2.9e-102
Identity = 199/300 (66.33%), Postives = 226/300 (75.33%), Query Frame = 0


Query: 27  SFSSTSSSLTLRTSFLALPLKSRRSNNLRLQFPTRRTTRRPNDGLSVCMSMEAGIGVMAT 86
           SF S  +  TL +S         +S++L ++         P     V  SMEAGIGVM +
Sbjct: 9   SFPSLLNKTTLSSSLFTPTFLPAKSSSLLIK-------SSPKTRFVVSSSMEAGIGVMGS 68

Query: 87  KLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEATDGYSSVQVGYRRVRDRKLTKPELG 146
           KLGMMSFFE DG VVPVTVVGF+EGNIVTQ+KT ATDGY +VQ+GYRRVRD+KLTKPE G
Sbjct: 69  KLGMMSFFEEDGTVVPVTVVGFREGNIVTQIKTLATDGYDAVQIGYRRVRDKKLTKPETG 128

Query: 147 HLQKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKEGDLVDVSGTTIGKGFQGSYLCV 206
           HLQKAG IPMRHLQEFRL +++GFEPNQ+LVF+E+FKEGDLVDV+GTTIGKGFQ      
Sbjct: 129 HLQKAGTIPMRHLQEFRLTNIEGFEPNQKLVFDEIFKEGDLVDVAGTTIGKGFQ------ 188

Query: 207 WIRMCLCYLGKLSLQNTFIVIPCHGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVY 266
                                   GGIKRH+FKRG MTHGSKSHRALGSIGAGTTPGRVY
Sbjct: 189 ------------------------GGIKRHHFKRGQMTHGSKSHRALGSIGAGTTPGRVY 248

Query: 267 KGKKMPGRMGGTKRKIRKLRIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 326
           KGKKMPGRMGGT+ KIRKL+IVK+D++LNVVMIKGA+PGKPGNLLRI PAKIVG NIPKN
Sbjct: 249 KGKKMPGRMGGTRTKIRKLKIVKVDKELNVVMIKGALPGKPGNLLRITPAKIVGVNIPKN 271

[Close]

BLAST of Cla97C06G109810 vs. ExPASy Swiss-Prot
Match: P82191 (50S ribosomal protein L3, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL3 PE=1 SV=2)

HSP 1 Score: 371.3 bits (952), Expect = 1.1e-101
Identity = 215/332 (64.76%), Postives = 240/332 (72.29%), Query Frame = 0


Query: 5   SFSSASTSSRYPIFTNNASSSSSFSSTSS--------SLTLRTSFLALPLKSRRSNNLRL 64
           +FS  S+S  Y     + SS  + S +SS        SL L TSF+  P    +   L+ 
Sbjct: 7   TFSIKSSSCTYSSSKRSLSSPKAVSLSSSVNGTPKVQSLRLSTSFVCSP---NQIIKLKS 66

Query: 65  QFPTRRT-TRRPNDGLSV-CMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIV 124
             P+R T  RR   GL +  MS++AGIGVM TKLGMMSFFE DG VVPVTV+GFKEGNIV
Sbjct: 67  VSPSRSTQLRRAVGGLEIKMMSVDAGIGVMGTKLGMMSFFEEDGTVVPVTVIGFKEGNIV 126

Query: 125 TQVKTEATDGYSSVQVGYRRVRDRKLTKPELGHLQKAGAIPMRHLQEFRLESVDGFEPNQ 184
           TQVKTE+TDGY++VQVGY R+RDRKLT PE GHL KAG IPMRHLQEFRL SVD F P+Q
Sbjct: 127 TQVKTESTDGYNAVQVGYERLRDRKLTMPERGHLNKAGVIPMRHLQEFRLVSVDDFTPSQ 186

Query: 185 RLVFNELFKEGDLVDVSGTTIGKGFQGSYLCVWIRMCLCYLGKLSLQNTFIVIPCHGGIK 244
           +L+F ELFKEGD+VD+SGTTIGKGFQ                              GGIK
Sbjct: 187 KLLFEELFKEGDMVDISGTTIGKGFQ------------------------------GGIK 246

Query: 245 RHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLRIVKIDEDL 304
           RHNFKRG MTHGSKSHRALGSIGAGTTPG VYKGKKMPGRMGGTK KIRKL+I+KID DL
Sbjct: 247 RHNFKRGLMTHGSKSHRALGSIGAGTTPGHVYKGKKMPGRMGGTKTKIRKLKIMKIDTDL 305

Query: 305 NVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 327
            VVMIKGAVPGKPGNLLR+APAKIVGKNIPKN
Sbjct: 307 RVVMIKGAVPGKPGNLLRLAPAKIVGKNIPKN 305

[Close]

BLAST of Cla97C06G109810 vs. ExPASy Swiss-Prot
Match: B1XJT9 (50S ribosomal protein L3 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) OX=32049 GN=rplC PE=3 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 3.3e-61
Identity = 126/243 (51.85%), Postives = 164/243 (67.49%), Query Frame = 0


Query: 81  IGVMATKLGMMSFFEPD-GKVVPVTVVGFKEGN-IVTQVKTEATDGYSSVQVGYRRVRDR 140
           +G++ TKLGM   F+ + G  +PVTVV  + G   VTQ+KT  TDGY+SVQ+GY  V+++
Sbjct: 3   LGILGTKLGMTQIFDNETGTAIPVTVV--QAGPCTVTQIKTSETDGYTSVQIGYGDVKEK 62

Query: 141 KLTKPELGHLQKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKEGDLVDVSGTTIGKG 200
            LTKP+LGHL+KA A P+RHL+E+RL+ V G+E  Q +  N +F+ G +VDVSG TIG+G
Sbjct: 63  NLTKPQLGHLKKADAAPLRHLKEYRLDDVSGYELGQAITAN-IFEAGQVVDVSGNTIGRG 122

Query: 201 FQGSYLCVWIRMCLCYLGKLSLQNTFIVIPCHGGIKRHNFKRGPMTHGSKSHRALGSIGA 260
           F G                                KRHNFKRG MTHGSK+HR  GS GA
Sbjct: 123 FAGYQ------------------------------KRHNFKRGNMTHGSKNHRLPGSTGA 182

Query: 261 GTTPGRVYKGKKMPGRMGGTKRKIRKLRIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKI 320
           GTTPGRVY GK+M GR GGTK  +RKL +V++DE+ N+++IKGA+PGK GNLL IAP+ I
Sbjct: 183 GTTPGRVYPGKRMAGRYGGTKITVRKLEVVRVDEEKNLLLIKGAIPGKAGNLLSIAPSNI 212

Query: 321 VGK 322
           VG+
Sbjct: 243 VGQ 212

[Close]

BLAST of Cla97C06G109810 vs. ExPASy Swiss-Prot
Match: B0C1D3 (50S ribosomal protein L3 OS=Acaryochloris marina (strain MBIC 11017) OX=329726 GN=rplC PE=3 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 4.7e-60
Identity = 121/243 (49.79%), Postives = 162/243 (66.67%), Query Frame = 0


Query: 81  IGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNI-VTQVKTEATDGYSSVQVGYRRVRDRK 140
           +G++ TKLGM   F+  G+ +PVTVV  + G   VTQ+KT  TDGY+++Q+GY    ++ 
Sbjct: 3   VGILGTKLGMTQVFDEAGRAIPVTVV--QAGPCPVTQIKTAQTDGYTAIQIGYGSTTEKA 62

Query: 141 LTKPELGHLQKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKEGDLVDVSGTTIGKGF 200
           LT+PELGHL+K+G+ P+RHLQE+RL  V  +E  Q  +  +LF EG LVD+SGT+IG+GF
Sbjct: 63  LTRPELGHLKKSGSTPVRHLQEYRLADVSEYELGQS-ISADLFSEGQLVDISGTSIGRGF 122

Query: 201 QGSYLCVWIRMCLCYLGKLSLQNTFIVIPCHGGIKRHNFKRGPMTHGSKSHRALGSIGAG 260
            G                                KRHNF+RGPM HGSK+HRA GS GAG
Sbjct: 123 AGYQ------------------------------KRHNFRRGPMGHGSKNHRAPGSTGAG 182

Query: 261 TTPGRVYKGKKMPGRMGGTKRKIRKLRIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIV 320
           TTPGR+Y GK+M G+MG  K+ IRKL +V++D + NV++IKG+VPGKPG LL I PA IV
Sbjct: 183 TTPGRIYPGKRMAGQMGNVKKTIRKLTVVRVDAERNVLLIKGSVPGKPGALLNIQPATIV 212

Query: 321 GKN 323
           G++
Sbjct: 243 GES 212

[Close]

BLAST of Cla97C06G109810 vs. ExPASy TrEMBL
Match: A0A1S3CBR5 (50S ribosomal protein L3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103499009 PE=3 SV=1)

HSP 1 Score: 515.8 bits (1327), Expect = 1.3e-142
Identity = 277/326 (84.97%), Postives = 286/326 (87.73%), Query Frame = 0


Query: 1   MSIISFSSASTSSRYPIFTNNASSSSSFSSTSSSLTLRTSFLALPLKSRRSNNLRLQFPT 60
           MSIISFSSAS S+++PIFTNN SSS   SS+SSSLTLRTSFLALPLKS   NNLR  FPT
Sbjct: 1   MSIISFSSASASTKHPIFTNNPSSS---SSSSSSLTLRTSFLALPLKSHHKNNLRFHFPT 60

Query: 61  RRTTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTE 120
           RRTTRRP+DGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTE
Sbjct: 61  RRTTRRPSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTE 120

Query: 121 ATDGYSSVQVGYRRVRDRKLTKPELGHLQKAGAIPMRHLQEFRLESVDGFEPNQRLVFNE 180
           ATDGYS+VQVGYRRVRDRKLTKPELGHL+KAGAIPMRHLQEFRLESVDGFEPNQRLVFNE
Sbjct: 121 ATDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNE 180

Query: 181 LFKEGDLVDVSGTTIGKGFQGSYLCVWIRMCLCYLGKLSLQNTFIVIPCHGGIKRHNFKR 240
           LFKEGDLVDVSGTTIGKGFQ                              GGIKRHNFKR
Sbjct: 181 LFKEGDLVDVSGTTIGKGFQ------------------------------GGIKRHNFKR 240

Query: 241 GPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLRIVKIDEDLNVVMIK 300
           GPM+HGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKL+IVKIDEDLNVVMIK
Sbjct: 241 GPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKIDEDLNVVMIK 293

Query: 301 GAVPGKPGNLLRIAPAKIVGKNIPKN 327
           GAVPGKPGNLLRIAPAKIVGKNIPKN
Sbjct: 301 GAVPGKPGNLLRIAPAKIVGKNIPKN 293

[Close]

BLAST of Cla97C06G109810 vs. ExPASy TrEMBL
Match: A0A6J1KXN5 (50S ribosomal protein L3, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111499138 PE=3 SV=1)

HSP 1 Score: 513.5 bits (1321), Expect = 6.7e-142
Identity = 274/326 (84.05%), Postives = 284/326 (87.12%), Query Frame = 0


Query: 1   MSIISFSSASTSSRYPIFTNNASSSSSFSSTSSSLTLRTSFLALPLKSRRSNNLRLQFPT 60
           MS+IS SSASTS R+PIFTNNASS    SS SSSL LRTSFLALPLKS R+NN+R QFP 
Sbjct: 1   MSVISISSASTSKRHPIFTNNASS----SSPSSSLKLRTSFLALPLKSHRNNNVRFQFPR 60

Query: 61  RRTTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTE 120
            RTTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQ+KTE
Sbjct: 61  PRTTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQIKTE 120

Query: 121 ATDGYSSVQVGYRRVRDRKLTKPELGHLQKAGAIPMRHLQEFRLESVDGFEPNQRLVFNE 180
           ATDGYS+VQVGYRRVRDRKLTKPE+GHLQKAGAIPMRHLQEFRLES+DGFEPNQRLVFNE
Sbjct: 121 ATDGYSAVQVGYRRVRDRKLTKPEMGHLQKAGAIPMRHLQEFRLESIDGFEPNQRLVFNE 180

Query: 181 LFKEGDLVDVSGTTIGKGFQGSYLCVWIRMCLCYLGKLSLQNTFIVIPCHGGIKRHNFKR 240
           LFKEGDLVDVSGTTIGKGFQ                              GGIKRHNFKR
Sbjct: 181 LFKEGDLVDVSGTTIGKGFQ------------------------------GGIKRHNFKR 240

Query: 241 GPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLRIVKIDEDLNVVMIK 300
           GPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKL+IVKID+DLNVVMIK
Sbjct: 241 GPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKIDDDLNVVMIK 292

Query: 301 GAVPGKPGNLLRIAPAKIVGKNIPKN 327
           GAVPGKPGNLLRIAPAKIVGKNIPKN
Sbjct: 301 GAVPGKPGNLLRIAPAKIVGKNIPKN 292

[Close]

BLAST of Cla97C06G109810 vs. ExPASy TrEMBL
Match: A0A5A7TD05 (50S ribosomal protein L3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G002680 PE=3 SV=1)

HSP 1 Score: 512.7 bits (1319), Expect = 1.1e-141
Identity = 276/326 (84.66%), Postives = 285/326 (87.42%), Query Frame = 0


Query: 1   MSIISFSSASTSSRYPIFTNNASSSSSFSSTSSSLTLRTSFLALPLKSRRSNNLRLQFPT 60
           MSIISFSSAS S+++PIFTNN SSS   SS+SSSLTLRTSFLALPLKS   NNLR  F T
Sbjct: 1   MSIISFSSASASTKHPIFTNNPSSS---SSSSSSLTLRTSFLALPLKSHHKNNLRFHFAT 60

Query: 61  RRTTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTE 120
           RRTTRRP+DGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTE
Sbjct: 61  RRTTRRPSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTE 120

Query: 121 ATDGYSSVQVGYRRVRDRKLTKPELGHLQKAGAIPMRHLQEFRLESVDGFEPNQRLVFNE 180
           ATDGYS+VQVGYRRVRDRKLTKPELGHL+KAGAIPMRHLQEFRLESVDGFEPNQRLVFNE
Sbjct: 121 ATDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNE 180

Query: 181 LFKEGDLVDVSGTTIGKGFQGSYLCVWIRMCLCYLGKLSLQNTFIVIPCHGGIKRHNFKR 240
           LFKEGDLVDVSGTTIGKGFQ                              GGIKRHNFKR
Sbjct: 181 LFKEGDLVDVSGTTIGKGFQ------------------------------GGIKRHNFKR 240

Query: 241 GPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLRIVKIDEDLNVVMIK 300
           GPM+HGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKL+IVKIDEDLNVVMIK
Sbjct: 241 GPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKIDEDLNVVMIK 293

Query: 301 GAVPGKPGNLLRIAPAKIVGKNIPKN 327
           GAVPGKPGNLLRIAPAKIVGKNIPKN
Sbjct: 301 GAVPGKPGNLLRIAPAKIVGKNIPKN 293

[Close]

BLAST of Cla97C06G109810 vs. ExPASy TrEMBL
Match: A0A6J1H630 (50S ribosomal protein L3, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111460446 PE=3 SV=1)

HSP 1 Score: 512.7 bits (1319), Expect = 1.1e-141
Identity = 274/326 (84.05%), Postives = 284/326 (87.12%), Query Frame = 0


Query: 1   MSIISFSSASTSSRYPIFTNNASSSSSFSSTSSSLTLRTSFLALPLKSRRSNNLRLQFPT 60
           MS+IS S ASTS+R+PIFTNNASS    SS SSSL LRTSFLALPLKS R+NNLR QFP 
Sbjct: 1   MSVISISLASTSNRHPIFTNNASS----SSPSSSLKLRTSFLALPLKSHRNNNLRFQFPR 60

Query: 61  RRTTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTE 120
            RTTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQ+KTE
Sbjct: 61  PRTTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQIKTE 120

Query: 121 ATDGYSSVQVGYRRVRDRKLTKPELGHLQKAGAIPMRHLQEFRLESVDGFEPNQRLVFNE 180
           ATDGYS+VQVGYRRVRDRKLTKPE+GHLQKAGAIPMRHLQEFRLES+DGFEPNQRLVFNE
Sbjct: 121 ATDGYSAVQVGYRRVRDRKLTKPEMGHLQKAGAIPMRHLQEFRLESIDGFEPNQRLVFNE 180

Query: 181 LFKEGDLVDVSGTTIGKGFQGSYLCVWIRMCLCYLGKLSLQNTFIVIPCHGGIKRHNFKR 240
           LFKEGDLVDVSGTTIGKGFQ                              GGIKRHNFKR
Sbjct: 181 LFKEGDLVDVSGTTIGKGFQ------------------------------GGIKRHNFKR 240

Query: 241 GPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLRIVKIDEDLNVVMIK 300
           GPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKL+IVKID+DLNVVMIK
Sbjct: 241 GPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKIDDDLNVVMIK 292

Query: 301 GAVPGKPGNLLRIAPAKIVGKNIPKN 327
           GAVPGKPGNLLRIAPAKIVGKNIPKN
Sbjct: 301 GAVPGKPGNLLRIAPAKIVGKNIPKN 292

[Close]

BLAST of Cla97C06G109810 vs. ExPASy TrEMBL
Match: A0A0A0K9U5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G078530 PE=3 SV=1)

HSP 1 Score: 507.7 bits (1306), Expect = 3.7e-140
Identity = 273/326 (83.74%), Postives = 285/326 (87.42%), Query Frame = 0


Query: 1   MSIISFSSASTSSRYPIFTNNASSSSSFSSTSSSLTLRTSFLALPLKSRRSNNLRLQFPT 60
           MSIISFSSAS S+++PIFTNN SSSS  SS+SSSLTLRTSFLALPLKS   NNLR  FPT
Sbjct: 1   MSIISFSSASASTKHPIFTNNPSSSS--SSSSSSLTLRTSFLALPLKSHNKNNLRFHFPT 60

Query: 61  RRTTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTE 120
           R TTRRP+DGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKT+
Sbjct: 61  RPTTRRPSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTD 120

Query: 121 ATDGYSSVQVGYRRVRDRKLTKPELGHLQKAGAIPMRHLQEFRLESVDGFEPNQRLVFNE 180
           ATDGYS+VQVGYRRVRDRKLTKPELGHL+KAGAIPMRHLQEFRLESVD FEPNQRLVFNE
Sbjct: 121 ATDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDAFEPNQRLVFNE 180

Query: 181 LFKEGDLVDVSGTTIGKGFQGSYLCVWIRMCLCYLGKLSLQNTFIVIPCHGGIKRHNFKR 240
           LFKEGDLVDVSGTTIGKGFQ                              GGIKRHNFKR
Sbjct: 181 LFKEGDLVDVSGTTIGKGFQ------------------------------GGIKRHNFKR 240

Query: 241 GPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLRIVKIDEDLNVVMIK 300
           GPM+HGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKL+IVKIDEDLNVVMIK
Sbjct: 241 GPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKIDEDLNVVMIK 294

Query: 301 GAVPGKPGNLLRIAPAKIVGKNIPKN 327
           GAVPGKPGNLLRIAPAKIVG+NIPK+
Sbjct: 301 GAVPGKPGNLLRIAPAKIVGQNIPKS 294

[Close]

BLAST of Cla97C06G109810 vs. TAIR 10
Match: AT2G43030.1 (Ribosomal protein L3 family protein )

HSP 1 Score: 373.2 bits (957), Expect = 2.1e-103
Identity = 199/300 (66.33%), Postives = 226/300 (75.33%), Query Frame = 0


Query: 27  SFSSTSSSLTLRTSFLALPLKSRRSNNLRLQFPTRRTTRRPNDGLSVCMSMEAGIGVMAT 86
           SF S  +  TL +S         +S++L ++         P     V  SMEAGIGVM +
Sbjct: 9   SFPSLLNKTTLSSSLFTPTFLPAKSSSLLIK-------SSPKTRFVVSSSMEAGIGVMGS 68

Query: 87  KLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEATDGYSSVQVGYRRVRDRKLTKPELG 146
           KLGMMSFFE DG VVPVTVVGF+EGNIVTQ+KT ATDGY +VQ+GYRRVRD+KLTKPE G
Sbjct: 69  KLGMMSFFEEDGTVVPVTVVGFREGNIVTQIKTLATDGYDAVQIGYRRVRDKKLTKPETG 128

Query: 147 HLQKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKEGDLVDVSGTTIGKGFQGSYLCV 206
           HLQKAG IPMRHLQEFRL +++GFEPNQ+LVF+E+FKEGDLVDV+GTTIGKGFQ      
Sbjct: 129 HLQKAGTIPMRHLQEFRLTNIEGFEPNQKLVFDEIFKEGDLVDVAGTTIGKGFQ------ 188

Query: 207 WIRMCLCYLGKLSLQNTFIVIPCHGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVY 266
                                   GGIKRH+FKRG MTHGSKSHRALGSIGAGTTPGRVY
Sbjct: 189 ------------------------GGIKRHHFKRGQMTHGSKSHRALGSIGAGTTPGRVY 248

Query: 267 KGKKMPGRMGGTKRKIRKLRIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 326
           KGKKMPGRMGGT+ KIRKL+IVK+D++LNVVMIKGA+PGKPGNLLRI PAKIVG NIPKN
Sbjct: 249 KGKKMPGRMGGTRTKIRKLKIVKVDKELNVVMIKGALPGKPGNLLRITPAKIVGVNIPKN 271

[Close]

BLAST of Cla97C06G109810 vs. TAIR 10
Match: AT3G17465.1 (ribosomal protein L3 plastid )

HSP 1 Score: 125.9 bits (315), Expect = 5.8e-29
Identity = 80/236 (33.90%), Postives = 124/236 (52.54%), Query Frame = 0


Query: 82  GVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEATDGYSSVQVGYRRVRDRKLT 141
           G++A K GM + ++  GK +P++++ + + NIV+QVKT   +G  ++Q+G  + + + L+
Sbjct: 78  GIIAVKCGMTALWDKWGKRIPISIL-WVDDNIVSQVKTVEKEGIFALQIGCGQKKPKHLS 137

Query: 142 KPELGHLQKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKEGDLVDVSGTTIGKGFQG 201
           K  +GH +  G    R L+EF + + D   P    +    F  G  VDV+G T GKGFQG
Sbjct: 138 KAVVGHFRAQGVPLKRKLREFPV-TEDALLPVGTSLGVRHFVPGQYVDVTGITRGKGFQG 197

Query: 202 SYLCVWIRMCLCYLGKLSLQNTFIVIPCHGGIKRHNFKRGPMTHG-SKSHRALGSIGAGT 261
                                          +KRH F   P +HG S SHR+ GS G   
Sbjct: 198 C------------------------------MKRHGFSGMPASHGASLSHRSGGSTGQRD 257

Query: 262 TPGRVYKGKKMPGRMGGTKRKIRKLRIVKIDEDLNVVMIKGAVPGKPGNLLRIAPA 317
            PG+V+KG+KM GRMG  +R ++ + + KID   N++ ++G VPG  GN + I  A
Sbjct: 258 APGKVFKGRKMAGRMGADQRTVKNVWVYKIDPARNLMWVRGQVPGAEGNFVFIKDA 281

The following BLAST results are available for this feature:

BLAST of Cla97C06G109810 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876222.1	6.6e-144	85.89	50S ribosomal protein L3, chloroplastic [Benincasa hispida]	[more]
XP_008460096.1	2.8e-142	84.97	PREDICTED: 50S ribosomal protein L3, chloroplastic [Cucumis melo]	[more]
KAG6574805.1	4.7e-142	84.36	50S ribosomal protein L3, chloroplastic, partial [Cucurbita argyrosperma subsp. ...	[more]
XP_023006396.1	1.4e-141	84.05	50S ribosomal protein L3, chloroplastic-like [Cucurbita maxima]	[more]
KAA0039986.1	2.3e-141	84.66	50S ribosomal protein L3 [Cucumis melo var. makuwa]	[more]

BLAST of Cla97C06G109810 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80360	1.1e-104	68.58	50S ribosomal protein L3, chloroplastic (Fragment) OS=Nicotiana tabacum OX=4097 ...	[more]
Q9SKX4	2.9e-102	66.33	50S ribosomal protein L3-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL...	[more]
P82191	1.1e-101	64.76	50S ribosomal protein L3, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL3 PE=...	[more]
B1XJT9	3.3e-61	51.85	50S ribosomal protein L3 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR...	[more]
B0C1D3	4.7e-60	49.79	50S ribosomal protein L3 OS=Acaryochloris marina (strain MBIC 11017) OX=329726 G...	[more]

BLAST of Cla97C06G109810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CBR5	1.3e-142	84.97	50S ribosomal protein L3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103499009 ...	[more]
A0A6J1KXN5	6.7e-142	84.05	50S ribosomal protein L3, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A5A7TD05	1.1e-141	84.66	50S ribosomal protein L3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A6J1H630	1.1e-141	84.05	50S ribosomal protein L3, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A0A0K9U5	3.7e-140	83.74	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G078530 PE=3 SV=1	[more]

BLAST of Cla97C06G109810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G43030.1	2.1e-103	66.33	Ribosomal protein L3 family protein	[more]
AT3G17465.1	5.8e-29	33.90	ribosomal protein L3 plastid	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.810		coord: 113..172 e-value: 8.3E-20 score: 73.0
None	No IPR available	GENE3D	2.40.30.10	Translation factors	coord: 238..318 e-value: 1.1E-20 score: 75.8
None	No IPR available	PANTHER	PTHR11229:SF16	50S RIBOSOMAL PROTEIN L3-1, CHLOROPLASTIC	coord: 230..325 coord: 75..202
IPR000597	Ribosomal protein L3	PFAM	PF00297	Ribosomal_L3	coord: 230..292 e-value: 5.7E-6 score: 25.5
IPR019927	Ribosomal protein L3, bacterial/organelle-type	PANTHER	PTHR11229	50S RIBOSOMAL PROTEIN L3	coord: 230..325
IPR019927	Ribosomal protein L3, bacterial/organelle-type	PANTHER	PTHR11229	50S RIBOSOMAL PROTEIN L3	coord: 75..202
IPR019927	Ribosomal protein L3, bacterial/organelle-type	HAMAP	MF_01325_B	Ribosomal_L3_B	coord: 80..317 score: 31.870838
IPR009000	Translation protein, beta-barrel domain superfamily	SUPERFAMILY	50447	Translation proteins	coord: 231..322
IPR009000	Translation protein, beta-barrel domain superfamily	SUPERFAMILY	50447	Translation proteins	coord: 81..202

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C06G109810.2	Cla97C06G109810.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome