Cla97C05G107000 (gene) Watermelon (97103) v2.5

Overview
NameCla97C05G107000
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionUnknown protein
LocationCla97Chr05: 34055723 .. 34056217 (+)
RNA-Seq ExpressionCla97C05G107000
SyntenyCla97C05G107000
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACAGAACTGACTGTTCGAGAGTTTCATGGTTCAAACCTCTAGCGACAGATTTGTGGTATAAACAATCCAATTTCTCATCTCGGTCGAATTTGCCGGTGACCATCAAAAGCAAGTGGTCTGGGAACAGGACACGGCTTTCGATTCTCAAAGGCGAATACTTACTGCTCAAAGAATTGTCAAGTGTGGACTTGCTGGCAGAGGTGGACAACCGGGAGAGAGTGGTGGAAGAGGCATCGAGAACTGGCCGGAAAGACGCCGCGGCAATCGAGAACCACCGACTGGATGAGAGAAACAAGAGAAAAGCAAAAAAAGAGAGGCAAAGAAACAGAGATCTTCGAGTAAAGAACTGTACATGGGAGCTAGACCTCCCAAAACGCTTCCTTTTCCGCCGCTGCTGTTCCCAATCCATTAATCCTAAGCAGAATCCAAAAGTCACTCCGAACCCAAATCAGAAAAAGGCTCAATTTCGGTGCAGATCCGGTCAGATGTAA

mRNA sequence

ATGGACAGAACTGACTGTTCGAGAGTTTCATGGTTCAAACCTCTAGCGACAGATTTGTGGTATAAACAATCCAATTTCTCATCTCGGTCGAATTTGCCGGTGACCATCAAAAGCAAGTGGTCTGGGAACAGGACACGGCTTTCGATTCTCAAAGGCGAATACTTACTGCTCAAAGAATTGTCAAGTGTGGACTTGCTGGCAGAGGTGGACAACCGGGAGAGAGTGGTGGAAGAGGCATCGAGAACTGGCCGGAAAGACGCCGCGGCAATCGAGAACCACCGACTGGATGAGAGAAACAAGAGAAAAGCAAAAAAAGAGAGGCAAAGAAACAGAGATCTTCGAGTAAAGAACTGTACATGGGAGCTAGACCTCCCAAAACGCTTCCTTTTCCGCCGCTGCTGTTCCCAATCCATTAATCCTAAGCAGAATCCAAAAGTCACTCCGAACCCAAATCAGAAAAAGGCTCAATTTCGGTGCAGATCCGGTCAGATGTAA

Coding sequence (CDS)

ATGGACAGAACTGACTGTTCGAGAGTTTCATGGTTCAAACCTCTAGCGACAGATTTGTGGTATAAACAATCCAATTTCTCATCTCGGTCGAATTTGCCGGTGACCATCAAAAGCAAGTGGTCTGGGAACAGGACACGGCTTTCGATTCTCAAAGGCGAATACTTACTGCTCAAAGAATTGTCAAGTGTGGACTTGCTGGCAGAGGTGGACAACCGGGAGAGAGTGGTGGAAGAGGCATCGAGAACTGGCCGGAAAGACGCCGCGGCAATCGAGAACCACCGACTGGATGAGAGAAACAAGAGAAAAGCAAAAAAAGAGAGGCAAAGAAACAGAGATCTTCGAGTAAAGAACTGTACATGGGAGCTAGACCTCCCAAAACGCTTCCTTTTCCGCCGCTGCTGTTCCCAATCCATTAATCCTAAGCAGAATCCAAAAGTCACTCCGAACCCAAATCAGAAAAAGGCTCAATTTCGGTGCAGATCCGGTCAGATGTAA

Protein sequence

MDRTDCSRVSWFKPLATDLWYKQSNFSSRSNLPVTIKSKWSGNRTRLSILKGEYLLLKELSSVDLLAEVDNRERVVEEASRTGRKDAAAIENHRLDERNKRKAKKERQRNRDLRVKNCTWELDLPKRFLFRRCCSQSINPKQNPKVTPNPNQKKAQFRCRSGQM
Homology
The following BLAST results are available for this feature:
BLAST of Cla97C05G107000 vs.
Match NameE-valueIdentityDescription
BLAST of Cla97C05G107000 vs.
Match NameE-valueIdentityDescription
BLAST of Cla97C05G107000 vs.
Match NameE-valueIdentityDescription
BLAST of Cla97C05G107000 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 139..164
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..103

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C05G107000.1Cla97C05G107000.1mRNA