Cla97C05G102230 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C05G102230
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	LOB domain-containing protein
Location	Cla97Chr05: 30549444 .. 30551077 (-)
RNA-Seq Expression	Cla97C05G102230
Synteny	Cla97C05G102230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTATAAACATTCATCATGTAAATAATTTCAATAATATTTTTAAAAATAGAAAATATATGATAGCAATGATTTCAATCTTCCATATAATTTTAAATACTAAAACAAACCTATTTTAAAATTTACAACAGAAGCATCACAATAATTTTGACTTTTTATTTTAAAAAATATATTTTTGAAGAATTTCAAATTAAACATAATCTTGAAATAACTTTAAAATTAAATAATAAAAACAAAAGTTTTCGAAACATAGAGTATAACTGAAAAAAAATTGTTTTGTATTAATTTAACGAATCTTAAAAAAAAAAAAAAAAGAAAAGAAAAAAAGAAAGAAAAAGGAGTTGAGGCGATGATCCGAGGATTGAGATGAATTTGGGAAAAGCAAAGAAGAGAGGAAGAGAAGAGGTTAAAGAAGAAAGAGTTCGCGGAAACACGGAGCCGCTCTCGCCCAGAGTTTGGAAGATATTCCCCTTGGAAAACGCTAATGCATTGGGCCCCACTCCCACCATTCTGACAACTGGGCCCCATCCCCCTTTTTACAAAAGTCCACCGTCAACACTCTGACATCAAACTTAACCACAGTTACTTTCCTAACCCACTTCCAATTTCTCTTCTTTTTAACCCATTCTTCTCCCATTTCCAGTAACTCCCCTCTCTTCACTCTTCTTCTTCCAACCATTTTCTCTTATTATTATTATTATTATTATTATTATTAATATTATTATTATTATTCTTATTTACTTCTACTACTAAAATCTTCTCCATCTCTCTCTCCTTCTTTTCTTCCTCTATTGCCCATTGCTTCAATCTTAAGAAACCATTTATTCTCCATTCCTTAATTCCCAACTGGAACTCATCTTCAATCTGAAACTCAACACCGCCTTTTGATTTGGGAACTCCCTTACTCCAAGGATGAGTTGCAACGGTTGCCGAGTGCTTCGAAAGGGCTGCAGCGAAACCTGCGTTTTAAGGTCAAGTCTCCATTGGATTGATTCTCCGGAAGCCCAAGGCAACGCCACTCTGTTTCTCGCTAAATTCTTCGGCCGTAGTGATCTCTTGTCCTTCATCTCCGCCGTTCCTTATCATCAAAGACCTGGTAACTTCCTTTTTCTTTACTACCCACTTCTTTAATTCCCCGATCAATCGACTCTAAGATTTCCCCCGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAGCTCTGTTTCAGTCTCTGTTATTCGAAGCTTGTGGTCGCACCGTTAACCCAGTTAGCGGAGCCGTTGGTCTCTTGTACAGTGGGAACTGGCACGTTTGTCAAGCGGCGGCGGATACCGTTCTCAACGGCGGAGTTCTCCGCCCGATACCCGGAATTGAAAGTTCTGGAAATCCCATCCCCAACGTCGATGATTCCGCACTTACTTTCAATACCGATGTCTGGACAACCACCACACACAATCTTCAATTTTACCCATCTACTCCGTCCGATTTCCGGTGCCTTCCGGATCTCGCTCTAGGCAGAGCGAAGAATCATCCATTGGAGAATCGGCGGTCTCTTGATTCCGAAGAGTCGGTCATGACCAGCTTCGGAAGCGGCGATCTCGGCGACCAACGGAAAGAGACGAAGCTTTTAAACTTATTCGTCTGA

mRNA sequence

ATGGGCGATGATCCGAGGATTGAGATGAATTTGGGAAAAGCAAAGAAGAGAGGAAGAGAAGAGGTTAAAGAAGAAAGAGTTCGCGGAAACACGGAGCCGCTCTCGCCCAGAGTTTGGAAGATATTCCCCTTGGAAAACGCTAATGCATTGGGCCCCACTCCCACCATTCTGACAACTGGGCCCCATCCCCCTTTTTACAAAAGTCCACCGATGAGTTGCAACGGTTGCCGAGTGCTTCGAAAGGGCTGCAGCGAAACCTGCGTTTTAAGGTCAAGTCTCCATTGGATTGATTCTCCGGAAGCCCAAGGCAACGCCACTCTGTTTCTCGCTAAATTCTTCGGCCGTAGTGATCTCTTGTCCTTCATCTCCGCCGTTCCTTATCATCAAAGACCTGCTCTGTTTCAGTCTCTGTTATTCGAAGCTTGTGGTCGCACCGTTAACCCAGTTAGCGGAGCCGTTGGTCTCTTGTACAGTGGGAACTGGCACGTTTGTCAAGCGGCGGCGGATACCGTTCTCAACGGCGGAGTTCTCCGCCCGATACCCGGAATTGAAAGTTCTGGAAATCCCATCCCCAACGTCGATGATTCCGCACTTACTTTCAATACCGATGTCTGGACAACCACCACACACAATCTTCAATTTTACCCATCTACTCCGTCCGATTTCCGGTGCCTTCCGGATCTCGCTCTAGGCAGAGCGAAGAATCATCCATTGGAGAATCGGCGGTCTCTTGATTCCGAAGAGTCGGTCATGACCAGCTTCGGAAGCGGCGATCTCGGCGACCAACGGAAAGAGACGAAGCTTTTAAACTTATTCGTCTGA

Coding sequence (CDS)

ATGGGCGATGATCCGAGGATTGAGATGAATTTGGGAAAAGCAAAGAAGAGAGGAAGAGAAGAGGTTAAAGAAGAAAGAGTTCGCGGAAACACGGAGCCGCTCTCGCCCAGAGTTTGGAAGATATTCCCCTTGGAAAACGCTAATGCATTGGGCCCCACTCCCACCATTCTGACAACTGGGCCCCATCCCCCTTTTTACAAAAGTCCACCGATGAGTTGCAACGGTTGCCGAGTGCTTCGAAAGGGCTGCAGCGAAACCTGCGTTTTAAGGTCAAGTCTCCATTGGATTGATTCTCCGGAAGCCCAAGGCAACGCCACTCTGTTTCTCGCTAAATTCTTCGGCCGTAGTGATCTCTTGTCCTTCATCTCCGCCGTTCCTTATCATCAAAGACCTGCTCTGTTTCAGTCTCTGTTATTCGAAGCTTGTGGTCGCACCGTTAACCCAGTTAGCGGAGCCGTTGGTCTCTTGTACAGTGGGAACTGGCACGTTTGTCAAGCGGCGGCGGATACCGTTCTCAACGGCGGAGTTCTCCGCCCGATACCCGGAATTGAAAGTTCTGGAAATCCCATCCCCAACGTCGATGATTCCGCACTTACTTTCAATACCGATGTCTGGACAACCACCACACACAATCTTCAATTTTACCCATCTACTCCGTCCGATTTCCGGTGCCTTCCGGATCTCGCTCTAGGCAGAGCGAAGAATCATCCATTGGAGAATCGGCGGTCTCTTGATTCCGAAGAGTCGGTCATGACCAGCTTCGGAAGCGGCGATCTCGGCGACCAACGGAAAGAGACGAAGCTTTTAAACTTATTCGTCTGA

Protein sequence

MGDDPRIEMNLGKAKKRGREEVKEERVRGNTEPLSPRVWKIFPLENANALGPTPTILTTGPHPPFYKSPPMSCNGCRVLRKGCSETCVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQRPALFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSGNPIPNVDDSALTFNTDVWTTTTHNLQFYPSTPSDFRCLPDLALGRAKNHPLENRRSLDSEESVMTSFGSGDLGDQRKETKLLNLFV

Homology

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BLAST of Cla97C05G102230 vs. NCBI nr
Match: XP_038899091.1 (LOB domain-containing protein 39-like [Benincasa hispida])

HSP 1 Score: 399.1 bits (1024), Expect = 3.2e-107
Identity = 190/203 (93.60%), Postives = 195/203 (96.06%), Query Frame = 0


Query: 71  MSCNGCRVLRKGCSETCVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 130
           MSCNGCRVLRKGCSETCVLR SLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR
Sbjct: 1   MSCNGCRVLRKGCSETCVLRGSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 60

Query: 131 PALFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSGNPI 190
           PALFQSLLFEACGRTVNPVSGAVGLL SGNWHVCQAAADTVLNGGVLRPIPG E SGN  
Sbjct: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAADTVLNGGVLRPIPGFEISGNLT 120

Query: 191 PNVDDSALTFNTDVWTTTTHNLQFYPSTPSDFRCLPDLALGRAKNHPLENRRSLDSEESV 250
           PN+D+S LTFNTDVWTTTTHNLQFYPSTPSDFRCLPDL+LGR KNHPLENRRSLDSEESV
Sbjct: 121 PNLDESLLTFNTDVWTTTTHNLQFYPSTPSDFRCLPDLSLGRGKNHPLENRRSLDSEESV 180

Query: 251 MTSFGSGDLGDQRKETKLLNLFV 274
           MTSFGSGD+GD+RKETKLLNLFV
Sbjct: 181 MTSFGSGDVGDRRKETKLLNLFV 203

[Close]

BLAST of Cla97C05G102230 vs. NCBI nr
Match: XP_008452637.1 (PREDICTED: LOB domain-containing protein 39-like [Cucumis melo] >KAA0064436.1 LOB domain-containing protein 39-like [Cucumis melo var. makuwa])

HSP 1 Score: 398.7 bits (1023), Expect = 4.1e-107
Identity = 189/203 (93.10%), Postives = 193/203 (95.07%), Query Frame = 0


Query: 71  MSCNGCRVLRKGCSETCVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 130
           MSCNGCRVLRKGCSE CVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR
Sbjct: 1   MSCNGCRVLRKGCSEACVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 60

Query: 131 PALFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSGNPI 190
           PALFQSLLFEACGRTVNPVSGAVGLL SGNWHVCQAAADT+LNGGVLRPIPGIE SGNP 
Sbjct: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAADTILNGGVLRPIPGIEISGNPT 120

Query: 191 PNVDDSALTFNTDVWTTTTHNLQFYPSTPSDFRCLPDLALGRAKNHPLENRRSLDSEESV 250
           PN+DDS+ TFN DVWTTTTHNLQFYPSTPSDFRCLPDL L R K HPLENRRSLDSEESV
Sbjct: 121 PNLDDSSFTFNNDVWTTTTHNLQFYPSTPSDFRCLPDLGLNRTKKHPLENRRSLDSEESV 180

Query: 251 MTSFGSGDLGDQRKETKLLNLFV 274
           MTSFGSGDLG+QRKETKLLNLFV
Sbjct: 181 MTSFGSGDLGEQRKETKLLNLFV 203

[Close]

BLAST of Cla97C05G102230 vs. NCBI nr
Match: XP_004141401.1 (LOB domain-containing protein 39 [Cucumis sativus] >KGN55262.1 hypothetical protein Csa_012579 [Cucumis sativus])

HSP 1 Score: 397.5 bits (1020), Expect = 9.2e-107
Identity = 193/205 (94.15%), Postives = 198/205 (96.59%), Query Frame = 0


Query: 71  MSCNGCRVLRKGCSETCVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 130
           MSCNGCRVLRKGCSE CVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR
Sbjct: 1   MSCNGCRVLRKGCSEACVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 60

Query: 131 PALFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSGNPI 190
           PALFQSLLFEACGRTVNPVSGAVGLL +GNWHVCQAAADT+LNGGVLRPIPGIE S NP 
Sbjct: 61  PALFQSLLFEACGRTVNPVSGAVGLLSTGNWHVCQAAADTILNGGVLRPIPGIEISANPT 120

Query: 191 PNVDDSALTFNTDVWTTTT-HNLQFYPSTPSDFRCLPDLALGRAKN-HPLENRRSLDSEE 250
           PN+DDS+LTFNTDVWTTTT HNLQFYPSTPSDFRCLPDL+LGRAKN HPLENRRSLDSEE
Sbjct: 121 PNLDDSSLTFNTDVWTTTTVHNLQFYPSTPSDFRCLPDLSLGRAKNHHPLENRRSLDSEE 180

Query: 251 SVMTSFGSGDLGDQRKETKLLNLFV 274
           SVMTSFGSGDLGDQRKETKLLNLFV
Sbjct: 181 SVMTSFGSGDLGDQRKETKLLNLFV 205

[Close]

BLAST of Cla97C05G102230 vs. NCBI nr
Match: XP_023535944.1 (LOB domain-containing protein 39-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 358.6 bits (919), Expect = 4.7e-95
Identity = 175/205 (85.37%), Postives = 186/205 (90.73%), Query Frame = 0


Query: 71  MSCNGCRVLRKGCSETCVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 130
           MSC+GCRVLRKGC+E CVLRSSLHWI SPEAQ NATLFLAKFFGRSDLLSFI+AVP+HQR
Sbjct: 1   MSCSGCRVLRKGCNEACVLRSSLHWIRSPEAQANATLFLAKFFGRSDLLSFIAAVPHHQR 60

Query: 131 PALFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSGNPI 190
           PALFQSLLFEACGRTVNPVSGAVGLL SGNWHVCQ AADTVL+GGVLRPIPGIE SGNP 
Sbjct: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQLAADTVLSGGVLRPIPGIELSGNPT 120

Query: 191 PNVDDSALTFNTDVWTTTTHNLQFYPSTPSDFRCLPDLAL--GRAKNHPLENRRSLDSEE 250
            NVDDS LTFNTDVWTTT  NLQ YPSTPSDFRCLPDLA+  GRAKNH LENRRSLDSE+
Sbjct: 121 RNVDDSTLTFNTDVWTTTAQNLQLYPSTPSDFRCLPDLAVAAGRAKNHTLENRRSLDSED 180

Query: 251 SVMTSFGSGDLGDQRKETKLLNLFV 274
           S+MTSFGS   GD+RK+ KLLNLF+
Sbjct: 181 SIMTSFGS---GDRRKQRKLLNLFI 202

[Close]

BLAST of Cla97C05G102230 vs. NCBI nr
Match: KAG7024296.1 (LOB domain-containing protein 38, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 354.0 bits (907), Expect = 1.2e-93
Identity = 173/205 (84.39%), Postives = 186/205 (90.73%), Query Frame = 0


Query: 71  MSCNGCRVLRKGCSETCVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 130
           MSC+GCRVLRKGC+E CVLRSSLHWI SPEAQ NATLFLAKFFGRSDLLSFI+AVP+HQR
Sbjct: 1   MSCSGCRVLRKGCNEACVLRSSLHWIHSPEAQANATLFLAKFFGRSDLLSFIAAVPHHQR 60

Query: 131 PALFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSGNPI 190
           PALFQSLLFEACGRTVNPVSGAVGLL SGNWHVCQ AA+TVL+GGVLRPIPGIE SGNP 
Sbjct: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQLAAETVLSGGVLRPIPGIELSGNPT 120

Query: 191 PNVDDSALTFNTDVWTTTTHNLQFYPSTPSDFRCLPDLAL--GRAKNHPLENRRSLDSEE 250
            NVDDS+LT NTDVWTTT  NLQ YPSTPSDFRCLPDLA+  GRAKNH LENRRSLDSE+
Sbjct: 121 RNVDDSSLTSNTDVWTTTGQNLQLYPSTPSDFRCLPDLAVAAGRAKNHTLENRRSLDSED 180

Query: 251 SVMTSFGSGDLGDQRKETKLLNLFV 274
           S+MTSFGS   GD+RK+ KLLNLF+
Sbjct: 181 SIMTSFGS---GDRRKQRKLLNLFI 202

[Close]

BLAST of Cla97C05G102230 vs. ExPASy Swiss-Prot
Match: Q9SZE8 (LOB domain-containing protein 39 OS=Arabidopsis thaliana OX=3702 GN=LBD39 PE=2 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 8.8e-52
Identity = 119/240 (49.58%), Postives = 149/240 (62.08%), Query Frame = 0


Query: 71  MSCNGCRVLRKGCSETCVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 130
           MSCNGCRVLRKGCSETC+LR  L WI+S E+QG+AT+F+AKFFGR+ L+SFIS+VP  QR
Sbjct: 1   MSCNGCRVLRKGCSETCILRPCLQWIESAESQGHATVFVAKFFGRAGLMSFISSVPELQR 60

Query: 131 PALFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSGNPI 190
           PALFQSLLFEACGRTVNPV+GAVG+L++ NWHVCQAA +TVL GG LRPI  +  S + +
Sbjct: 61  PALFQSLLFEACGRTVNPVNGAVGMLWTRNWHVCQAAVETVLRGGTLRPISDLLESPSLM 120

Query: 191 PNVDDSALTFNTDVWTTTTHNLQFYPSTPSD---------FRCLPDLALGRAKNHPLE-- 250
            + D+S+  ++ DV    TH+ +F  S  +           R   D  L    NH L   
Sbjct: 121 ISCDESSEIWHQDVSRNQTHHCRFSTSRSTTEMKDSLVNRKRLKSDSDLDLQVNHGLTLT 180

Query: 251 --------------------NRRSLDSEESVMTS-FGSGDLGDQRK-----ETKLLNLFV 274
                               +R    SEESV TS + +G  GD ++     E KLLNLFV
Sbjct: 181 APAVPVPFLPPSSFCKVVKGDRPGSPSEESVTTSCWENGMRGDNKQKRNKGEKKLLNLFV 240

[Close]

BLAST of Cla97C05G102230 vs. ExPASy Swiss-Prot
Match: Q9SN23 (LOB domain-containing protein 38 OS=Arabidopsis thaliana OX=3702 GN=LBD38 PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 7.7e-48
Identity = 89/131 (67.94%), Postives = 109/131 (83.21%), Query Frame = 0


Query: 71  MSCNGCRVLRKGCSETCVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 130
           MSCNGCRVLRKGCSE C+LR  + WI+SPEAQG+AT+F+AKFFGR+ L+SFISAVP  Q 
Sbjct: 1   MSCNGCRVLRKGCSENCILRPCIQWIESPEAQGHATVFVAKFFGRAGLMSFISAVPESQC 60

Query: 131 PALFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSGN-- 190
           PALFQSLL+EACGRTVNPV+GAVGLL++GNW+VCQAA +TVL GG L+PIP + + G   
Sbjct: 61  PALFQSLLYEACGRTVNPVNGAVGLLWTGNWNVCQAAVETVLRGGSLKPIPELLNGGGFA 120

Query: 191 --PIPNVDDSA 198
             P P  D+++
Sbjct: 121 GFPSPTSDEAS 131

[Close]

BLAST of Cla97C05G102230 vs. ExPASy Swiss-Prot
Match: Q9FN11 (LOB domain-containing protein 37 OS=Arabidopsis thaliana OX=3702 GN=LBD37 PE=2 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 2.5e-46
Identity = 82/117 (70.09%), Postives = 103/117 (88.03%), Query Frame = 0


Query: 71  MSCNGCRVLRKGCSETCVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 130
           MSCNGCRVLRKGCSE C+LR  + WI++ +AQG+AT+F+AKFFGR+ L+SFISAVP  QR
Sbjct: 1   MSCNGCRVLRKGCSENCILRPCIQWIETADAQGHATVFVAKFFGRAGLMSFISAVPDSQR 60

Query: 131 PALFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSG 188
           PALFQSLL+EACGRTVNPV+GA+G+L++GNW++CQAA +TVL GG LRPIP + + G
Sbjct: 61  PALFQSLLYEACGRTVNPVNGAIGMLWTGNWNICQAAVETVLRGGSLRPIPELLTHG 117

[Close]

BLAST of Cla97C05G102230 vs. ExPASy Swiss-Prot
Match: Q9ZW96 (LOB domain-containing protein 40 OS=Arabidopsis thaliana OX=3702 GN=LBD40 PE=2 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 2.5e-38
Identity = 69/110 (62.73%), Postives = 88/110 (80.00%), Query Frame = 0


Query: 71  MSCNGCRVLRKGCSETCVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 130
           MSCNGCRVLRKGCSE C +R  L WI S E+Q NAT+FLAKF+GR+ L++ ++  P H R
Sbjct: 3   MSCNGCRVLRKGCSENCSIRPCLQWIKSAESQANATVFLAKFYGRAGLMNLLNTGPDHLR 62

Query: 131 PALFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPI 181
           PA+F+SLL+EACGR VNP+ G+VGLL+SGNWH+CQAA + V+ G  + PI
Sbjct: 63  PAIFRSLLYEACGRIVNPIYGSVGLLWSGNWHLCQAAVEAVMRGSPVTPI 112

[Close]

BLAST of Cla97C05G102230 vs. ExPASy Swiss-Prot
Match: Q9CA30 (LOB domain-containing protein 42 OS=Arabidopsis thaliana OX=3702 GN=LBD42 PE=1 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.6e-37
Identity = 73/123 (59.35%), Postives = 92/123 (74.80%), Query Frame = 0


Query: 71  MSCNGCRVLRKGCSETCVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 130
           +SCNGCRVLRKGC++ C +R  L WI S ++Q NATLFLAKF+GR+ LL+ I + P H R
Sbjct: 3   ISCNGCRVLRKGCNQDCTIRPCLQWIKSADSQANATLFLAKFYGRAGLLNLIESGPDHLR 62

Query: 131 PALFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVL--RPIPGIESSGN 190
           PA+F+SLL+EACGR VNPV G+VGL++SGNW  CQAA D VLNG  +   P+P   +S  
Sbjct: 63  PAIFRSLLYEACGRIVNPVDGSVGLMWSGNWAQCQAAVDAVLNGLPITHTPLPSASASHQ 122

Query: 191 PIP 192
            IP
Sbjct: 123 IIP 125

[Close]

BLAST of Cla97C05G102230 vs. ExPASy TrEMBL
Match: A0A5A7VDI5 (LOB domain-containing protein 39-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G001480 PE=3 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 2.0e-107
Identity = 189/203 (93.10%), Postives = 193/203 (95.07%), Query Frame = 0


Query: 71  MSCNGCRVLRKGCSETCVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 130
           MSCNGCRVLRKGCSE CVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR
Sbjct: 1   MSCNGCRVLRKGCSEACVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 60

Query: 131 PALFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSGNPI 190
           PALFQSLLFEACGRTVNPVSGAVGLL SGNWHVCQAAADT+LNGGVLRPIPGIE SGNP 
Sbjct: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAADTILNGGVLRPIPGIEISGNPT 120

Query: 191 PNVDDSALTFNTDVWTTTTHNLQFYPSTPSDFRCLPDLALGRAKNHPLENRRSLDSEESV 250
           PN+DDS+ TFN DVWTTTTHNLQFYPSTPSDFRCLPDL L R K HPLENRRSLDSEESV
Sbjct: 121 PNLDDSSFTFNNDVWTTTTHNLQFYPSTPSDFRCLPDLGLNRTKKHPLENRRSLDSEESV 180

Query: 251 MTSFGSGDLGDQRKETKLLNLFV 274
           MTSFGSGDLG+QRKETKLLNLFV
Sbjct: 181 MTSFGSGDLGEQRKETKLLNLFV 203

[Close]

BLAST of Cla97C05G102230 vs. ExPASy TrEMBL
Match: A0A1S3BVG9 (LOB domain-containing protein 39-like OS=Cucumis melo OX=3656 GN=LOC103493596 PE=3 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 2.0e-107
Identity = 189/203 (93.10%), Postives = 193/203 (95.07%), Query Frame = 0


Query: 71  MSCNGCRVLRKGCSETCVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 130
           MSCNGCRVLRKGCSE CVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR
Sbjct: 1   MSCNGCRVLRKGCSEACVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 60

Query: 131 PALFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSGNPI 190
           PALFQSLLFEACGRTVNPVSGAVGLL SGNWHVCQAAADT+LNGGVLRPIPGIE SGNP 
Sbjct: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAADTILNGGVLRPIPGIEISGNPT 120

Query: 191 PNVDDSALTFNTDVWTTTTHNLQFYPSTPSDFRCLPDLALGRAKNHPLENRRSLDSEESV 250
           PN+DDS+ TFN DVWTTTTHNLQFYPSTPSDFRCLPDL L R K HPLENRRSLDSEESV
Sbjct: 121 PNLDDSSFTFNNDVWTTTTHNLQFYPSTPSDFRCLPDLGLNRTKKHPLENRRSLDSEESV 180

Query: 251 MTSFGSGDLGDQRKETKLLNLFV 274
           MTSFGSGDLG+QRKETKLLNLFV
Sbjct: 181 MTSFGSGDLGEQRKETKLLNLFV 203

[Close]

BLAST of Cla97C05G102230 vs. ExPASy TrEMBL
Match: A0A0A0L3S5 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G642430 PE=3 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 4.5e-107
Identity = 193/205 (94.15%), Postives = 198/205 (96.59%), Query Frame = 0


Query: 71  MSCNGCRVLRKGCSETCVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 130
           MSCNGCRVLRKGCSE CVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR
Sbjct: 1   MSCNGCRVLRKGCSEACVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 60

Query: 131 PALFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSGNPI 190
           PALFQSLLFEACGRTVNPVSGAVGLL +GNWHVCQAAADT+LNGGVLRPIPGIE S NP 
Sbjct: 61  PALFQSLLFEACGRTVNPVSGAVGLLSTGNWHVCQAAADTILNGGVLRPIPGIEISANPT 120

Query: 191 PNVDDSALTFNTDVWTTTT-HNLQFYPSTPSDFRCLPDLALGRAKN-HPLENRRSLDSEE 250
           PN+DDS+LTFNTDVWTTTT HNLQFYPSTPSDFRCLPDL+LGRAKN HPLENRRSLDSEE
Sbjct: 121 PNLDDSSLTFNTDVWTTTTVHNLQFYPSTPSDFRCLPDLSLGRAKNHHPLENRRSLDSEE 180

Query: 251 SVMTSFGSGDLGDQRKETKLLNLFV 274
           SVMTSFGSGDLGDQRKETKLLNLFV
Sbjct: 181 SVMTSFGSGDLGDQRKETKLLNLFV 205

[Close]

BLAST of Cla97C05G102230 vs. ExPASy TrEMBL
Match: A0A6J1FEE1 (LOB domain-containing protein 38-like OS=Cucurbita moschata OX=3662 GN=LOC111443315 PE=3 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 1.8e-92
Identity = 171/205 (83.41%), Postives = 184/205 (89.76%), Query Frame = 0


Query: 71  MSCNGCRVLRKGCSETCVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 130
           MSC+GCRVLRKGC+E CVLRSSLHWI SPEAQ NATLFLAKFFGRSDLLSFI+AVP+HQR
Sbjct: 1   MSCSGCRVLRKGCNEACVLRSSLHWIHSPEAQANATLFLAKFFGRSDLLSFIAAVPHHQR 60

Query: 131 PALFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSGNPI 190
           PALFQSLLFEACGRTVNPVSGAVGLL SGNWHVCQ AA+TVL+GGVLRPIPGIE SGNP 
Sbjct: 61  PALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQLAAETVLSGGVLRPIPGIELSGNPT 120

Query: 191 PNVDDSALTFNTDVWTTTTHNLQFYPSTPSDFRCLPDLALG--RAKNHPLENRRSLDSEE 250
            NVDDS+LT NTDVWTTT  NLQ YPSTPSDFRCLPDLA+   RAKNH  ENRRSLDSE+
Sbjct: 121 RNVDDSSLTSNTDVWTTTGQNLQLYPSTPSDFRCLPDLAVAAVRAKNHTPENRRSLDSED 180

Query: 251 SVMTSFGSGDLGDQRKETKLLNLFV 274
           S+MTSFGS   GD+RK+ KLLNLF+
Sbjct: 181 SIMTSFGS---GDRRKQRKLLNLFI 202

[Close]

BLAST of Cla97C05G102230 vs. ExPASy TrEMBL
Match: A0A6J1IIW5 (LOB domain-containing protein 39-like OS=Cucurbita maxima OX=3661 GN=LOC111477277 PE=3 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 4.2e-89
Identity = 164/203 (80.79%), Postives = 179/203 (88.18%), Query Frame = 0


Query: 71  MSCNGCRVLRKGCSETCVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 130
           MSC+GCRVLRKGC+E CVLRSSLHWI SPEAQ NATLFLAKFFGRSDLLSFI+AVP+HQR
Sbjct: 1   MSCSGCRVLRKGCNEACVLRSSLHWIHSPEAQANATLFLAKFFGRSDLLSFIAAVPHHQR 60

Query: 131 PALFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSGNPI 190
           PALFQSLLFEACGRTVNPVSGAVGL  SGNWHVCQ AADTVL+GGVLRPIPGIE SGNP 
Sbjct: 61  PALFQSLLFEACGRTVNPVSGAVGLFSSGNWHVCQLAADTVLSGGVLRPIPGIELSGNPT 120

Query: 191 PNVDDSALTFNTDVWTTTTHNLQFYPSTPSDFRCLPDLALGRAKNHPLENRRSLDSEESV 250
            N+DDS+LTFNTDVWTTT  NLQ YPS+PSDFRCLPDLA+        +NRRSLDSE+S+
Sbjct: 121 RNLDDSSLTFNTDVWTTTAQNLQLYPSSPSDFRCLPDLAVAA---RTAKNRRSLDSEDSI 180

Query: 251 MTSFGSGDLGDQRKETKLLNLFV 274
           MTSFGS   GD+RK+ KLLNLF+
Sbjct: 181 MTSFGS---GDRRKQRKLLNLFI 197

[Close]

BLAST of Cla97C05G102230 vs. TAIR 10
Match: AT4G37540.1 (LOB domain-containing protein 39 )

HSP 1 Score: 205.3 bits (521), Expect = 6.3e-53
Identity = 119/240 (49.58%), Postives = 149/240 (62.08%), Query Frame = 0


Query: 71  MSCNGCRVLRKGCSETCVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 130
           MSCNGCRVLRKGCSETC+LR  L WI+S E+QG+AT+F+AKFFGR+ L+SFIS+VP  QR
Sbjct: 1   MSCNGCRVLRKGCSETCILRPCLQWIESAESQGHATVFVAKFFGRAGLMSFISSVPELQR 60

Query: 131 PALFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSGNPI 190
           PALFQSLLFEACGRTVNPV+GAVG+L++ NWHVCQAA +TVL GG LRPI  +  S + +
Sbjct: 61  PALFQSLLFEACGRTVNPVNGAVGMLWTRNWHVCQAAVETVLRGGTLRPISDLLESPSLM 120

Query: 191 PNVDDSALTFNTDVWTTTTHNLQFYPSTPSD---------FRCLPDLALGRAKNHPLE-- 250
            + D+S+  ++ DV    TH+ +F  S  +           R   D  L    NH L   
Sbjct: 121 ISCDESSEIWHQDVSRNQTHHCRFSTSRSTTEMKDSLVNRKRLKSDSDLDLQVNHGLTLT 180

Query: 251 --------------------NRRSLDSEESVMTS-FGSGDLGDQRK-----ETKLLNLFV 274
                               +R    SEESV TS + +G  GD ++     E KLLNLFV
Sbjct: 181 APAVPVPFLPPSSFCKVVKGDRPGSPSEESVTTSCWENGMRGDNKQKRNKGEKKLLNLFV 240

[Close]

BLAST of Cla97C05G102230 vs. TAIR 10
Match: AT3G49940.1 (LOB domain-containing protein 38 )

HSP 1 Score: 192.2 bits (487), Expect = 5.5e-49
Identity = 89/131 (67.94%), Postives = 109/131 (83.21%), Query Frame = 0


Query: 71  MSCNGCRVLRKGCSETCVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 130
           MSCNGCRVLRKGCSE C+LR  + WI+SPEAQG+AT+F+AKFFGR+ L+SFISAVP  Q 
Sbjct: 1   MSCNGCRVLRKGCSENCILRPCIQWIESPEAQGHATVFVAKFFGRAGLMSFISAVPESQC 60

Query: 131 PALFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSGN-- 190
           PALFQSLL+EACGRTVNPV+GAVGLL++GNW+VCQAA +TVL GG L+PIP + + G   
Sbjct: 61  PALFQSLLYEACGRTVNPVNGAVGLLWTGNWNVCQAAVETVLRGGSLKPIPELLNGGGFA 120

Query: 191 --PIPNVDDSA 198
             P P  D+++
Sbjct: 121 GFPSPTSDEAS 131

[Close]

BLAST of Cla97C05G102230 vs. TAIR 10
Match: AT5G67420.1 (LOB domain-containing protein 37 )

HSP 1 Score: 187.2 bits (474), Expect = 1.8e-47
Identity = 82/117 (70.09%), Postives = 103/117 (88.03%), Query Frame = 0


Query: 71  MSCNGCRVLRKGCSETCVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 130
           MSCNGCRVLRKGCSE C+LR  + WI++ +AQG+AT+F+AKFFGR+ L+SFISAVP  QR
Sbjct: 1   MSCNGCRVLRKGCSENCILRPCIQWIETADAQGHATVFVAKFFGRAGLMSFISAVPDSQR 60

Query: 131 PALFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSG 188
           PALFQSLL+EACGRTVNPV+GA+G+L++GNW++CQAA +TVL GG LRPIP + + G
Sbjct: 61  PALFQSLLYEACGRTVNPVNGAIGMLWTGNWNICQAAVETVLRGGSLRPIPELLTHG 117

[Close]

BLAST of Cla97C05G102230 vs. TAIR 10
Match: AT1G67100.1 (LOB domain-containing protein 40 )

HSP 1 Score: 160.6 bits (405), Expect = 1.8e-39
Identity = 69/110 (62.73%), Postives = 88/110 (80.00%), Query Frame = 0


Query: 71  MSCNGCRVLRKGCSETCVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 130
           MSCNGCRVLRKGCSE C +R  L WI S E+Q NAT+FLAKF+GR+ L++ ++  P H R
Sbjct: 3   MSCNGCRVLRKGCSENCSIRPCLQWIKSAESQANATVFLAKFYGRAGLMNLLNTGPDHLR 62

Query: 131 PALFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPI 181
           PA+F+SLL+EACGR VNP+ G+VGLL+SGNWH+CQAA + V+ G  + PI
Sbjct: 63  PAIFRSLLYEACGRIVNPIYGSVGLLWSGNWHLCQAAVEAVMRGSPVTPI 112

[Close]

BLAST of Cla97C05G102230 vs. TAIR 10
Match: AT1G68510.1 (LOB domain-containing protein 42 )

HSP 1 Score: 157.9 bits (398), Expect = 1.1e-38
Identity = 73/123 (59.35%), Postives = 92/123 (74.80%), Query Frame = 0


Query: 71  MSCNGCRVLRKGCSETCVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPYHQR 130
           +SCNGCRVLRKGC++ C +R  L WI S ++Q NATLFLAKF+GR+ LL+ I + P H R
Sbjct: 3   ISCNGCRVLRKGCNQDCTIRPCLQWIKSADSQANATLFLAKFYGRAGLLNLIESGPDHLR 62

Query: 131 PALFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVL--RPIPGIESSGN 190
           PA+F+SLL+EACGR VNPV G+VGL++SGNW  CQAA D VLNG  +   P+P   +S  
Sbjct: 63  PAIFRSLLYEACGRIVNPVDGSVGLMWSGNWAQCQAAVDAVLNGLPITHTPLPSASASHQ 122

Query: 191 PIP 192
            IP
Sbjct: 123 IIP 125

The following BLAST results are available for this feature:

BLAST of Cla97C05G102230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899091.1	3.2e-107	93.60	LOB domain-containing protein 39-like [Benincasa hispida]	[more]
XP_008452637.1	4.1e-107	93.10	PREDICTED: LOB domain-containing protein 39-like [Cucumis melo] >KAA0064436.1 LO...	[more]
XP_004141401.1	9.2e-107	94.15	LOB domain-containing protein 39 [Cucumis sativus] >KGN55262.1 hypothetical prot...	[more]
XP_023535944.1	4.7e-95	85.37	LOB domain-containing protein 39-like [Cucurbita pepo subsp. pepo]	[more]
KAG7024296.1	1.2e-93	84.39	LOB domain-containing protein 38, partial [Cucurbita argyrosperma subsp. argyros...	[more]

BLAST of Cla97C05G102230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZE8	8.8e-52	49.58	LOB domain-containing protein 39 OS=Arabidopsis thaliana OX=3702 GN=LBD39 PE=2 S...	[more]
Q9SN23	7.7e-48	67.94	LOB domain-containing protein 38 OS=Arabidopsis thaliana OX=3702 GN=LBD38 PE=1 S...	[more]
Q9FN11	2.5e-46	70.09	LOB domain-containing protein 37 OS=Arabidopsis thaliana OX=3702 GN=LBD37 PE=2 S...	[more]
Q9ZW96	2.5e-38	62.73	LOB domain-containing protein 40 OS=Arabidopsis thaliana OX=3702 GN=LBD40 PE=2 S...	[more]
Q9CA30	1.6e-37	59.35	LOB domain-containing protein 42 OS=Arabidopsis thaliana OX=3702 GN=LBD42 PE=1 S...	[more]

BLAST of Cla97C05G102230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VDI5	2.0e-107	93.10	LOB domain-containing protein 39-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3BVG9	2.0e-107	93.10	LOB domain-containing protein 39-like OS=Cucumis melo OX=3656 GN=LOC103493596 PE...	[more]
A0A0A0L3S5	4.5e-107	94.15	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G642430 PE=3 SV...	[more]
A0A6J1FEE1	1.8e-92	83.41	LOB domain-containing protein 38-like OS=Cucurbita moschata OX=3662 GN=LOC111443...	[more]
A0A6J1IIW5	4.2e-89	80.79	LOB domain-containing protein 39-like OS=Cucurbita maxima OX=3661 GN=LOC11147727...	[more]

BLAST of Cla97C05G102230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37540.1	6.3e-53	49.58	LOB domain-containing protein 39	[more]
AT3G49940.1	5.5e-49	67.94	LOB domain-containing protein 38	[more]
AT5G67420.1	1.8e-47	70.09	LOB domain-containing protein 37	[more]
AT1G67100.1	1.8e-39	62.73	LOB domain-containing protein 40	[more]
AT1G68510.1	1.1e-38	59.35	LOB domain-containing protein 42	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 72..170 e-value: 2.7E-23 score: 82.4
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 71..177 score: 17.663155
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 237..258
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	PANTHER	PTHR31304	LOB DOMAIN-CONTAINING PROTEIN 38	coord: 71..273
None	No IPR available	PANTHER	PTHR31304:SF38	LOB DOMAIN-CONTAINING PROTEIN 39-LIKE	coord: 71..273

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C05G102230.2	Cla97C05G102230.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010468	regulation of gene expression