Cla97C05G100770 (gene) Watermelon (97103) v2.5

Overview
NameCla97C05G100770
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description30S ribosomal protein S9
LocationCla97Chr05: 29514286 .. 29516395 (+)
RNA-Seq ExpressionCla97C05G100770
SyntenyCla97C05G100770
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTACTTCGATATCCTCTCTTGCATTCTCTCTATCTTCTCTCTCCTTTTCTTCCCAAGTATCACATAAGCCAAATGCCCTGTCCTTTCCCCGCTCAAAATCCCTTCTAATTTCCCATGCCTGCTCTACTTCCCCACTTGTAGTATCTGCCTCCGCCGCTGCCGGAGTGGAGACGGCGGACCTTAGGAGCTTCGTCAAATCCAGCCTCCCTGGTGGTTTCGCCGCGCAAACGCTGTTTGGCACTGGTCGCCGGAAATCTGCCGTAGCTCGTGTTGTCCTTCGAGAAGGCACTGGCAAAGTTATTATCAATTATCGCGACGCTAAGGTCCTCTATCTTTTCCCTTGTTCGCATACTTTCGTTTAGTTTAATCCATTTTGGTACTGGATTTTCTTTGAACGTTTTAGGGTTTTGTTTCTTTTGCTGAATTCGACTAGGTTCGTTTGATGGCAATGCACATGTTTTCTTGGATTAAACCAATGATTGTTGTTATATTTTCCTGATTACCGTCTTCTATATGAGATGGAACTGATTTTTTTTTTCTCCACTGTCTCTGTTGTTATCGATCTGCGACGTTTGTTATGTTGAATTGGAAATCAACTTGAGAAAAACATTCTTTACATTCTAGAATTAAATTCCAAGGCTTTTGCCTCTTCATCTAATACGATGAAATTAGATTACATTTGGAGGGACTGCGGAACAAGTGCTTTCATTGATCAGAAGTCGGGACAAAGGACTGATGCGACTGTATCTATGTCTTGTGCTTCTTTTAAGTTTGAGTTTGATCTTTCGGTGAAATGGTTCTAAATGCCAAAAGACATATCTATTTCGGTGATTGAGTCGTTCCCTCGTTCTTTCTTAGTGGGTGTGGGAGTGGAAATGTGCCCTTGTTCTTCCACTTACATCGCATATGCAAATCTTTAGCATCTGATGACGTTAAATCACATTGCTATTGCAAATCCTTCTTTTGCCACTTGCCGGTGTTCATCAACTCGCTACATATCAATTGACATAATGCTTCTGGAGATGGCACCATAATCTCAAGTCTTGTATGGTTATCTTATAACCTATATCTACGTCTGTTCTTTAATAGGGGATTAGCATACTGAACAACCACAGATTGAGAAAGCACTCAAGAGAGAGAATTGAAAAATACATCTGATACCATGTCGACCCTTGAGTGTAACTTAAACTTGCATCACTTTCCATTAAGAAAAATTAGCTATATAAATAGCCAGGTGATAGTACAAATTAAGTATACAACAGAATAACAAACTATCTAACAAACTAATTTTCTCTTGTAATATGTTAAGATGTTGGTTTCTCTCCATAAACAAGTGAATTTAGTATACAATTTCCCCCCTTTTTTCCAACTAGTGGGTGTGGGGAGATTCGAATTTCAAACCTTTTGTTTAAGTGTATATGCCTTTTGAGCTTTGTTCATAGTGAACAAATGTGTTTCATTTATTGTCAGGATGCTATTTCCCCTTAAATAGTTAAATGTTTATAAAGGTTTCTGGTATATCTTTTGTTGAGTACAACAAGTGGAGGTAGGAAGATTTAACTATTGTTGTGCTATGCTCACTATGACATGTTTTTGTGGTAGTGATGCTTGGATAGTCTCTTTTAAACTTGATGTGATGACACATTATTTGAAATAAGGAAAAGACTCACCCAATTTGTACTTGAACTTCTACTTATGTATCTAGGACGACTTGTTATACAAACTAATTCGTTTTATATAAATCTTTTAAGCTGGGAGGGTGTGTTCAGTAGAATTGTACTCACATCTATGTTGGAATACACTTTTTTTTTTTTTCAGGAATACCTTCAAGGAAATCCATTGTGGCTTCAATATGTGAAAGTTCCATTAGTAACATTGGGATATGAAAGTAGCTATGATGTATTCGTGAAAGCCGAAGGAGGTGGGCTCTCTGGCCAGGCTCAAGCAATTTCCCTCGGCATTGCTCGGGCTCTGCTAAAGGTGAGTGATGATCACAGATCACCTCTAAAGAAAGAGGGGCTTTTGACAAGAGACTCTAGAGTCGTGGAGAGAAAGAAGGCTGGTCTCAAGAAAGCACGTAAAGCCCCACAATTCTCCAAGCGTTGA

mRNA sequence

ATGGCTACTTCGATATCCTCTCTTGCATTCTCTCTATCTTCTCTCTCCTTTTCTTCCCAAGTATCACATAAGCCAAATGCCCTGTCCTTTCCCCGCTCAAAATCCCTTCTAATTTCCCATGCCTGCTCTACTTCCCCACTTGTAGTATCTGCCTCCGCCGCTGCCGGAGTGGAGACGGCGGACCTTAGGAGCTTCGTCAAATCCAGCCTCCCTGGTGGTTTCGCCGCGCAAACGCTGTTTGGCACTGGTCGCCGGAAATCTGCCGTAGCTCGTGTTGTCCTTCGAGAAGGCACTGGCAAAGTTATTATCAATTATCGCGACGCTAAGGAATACCTTCAAGGAAATCCATTGTGGCTTCAATATGTGAAAGTTCCATTAGTAACATTGGGATATGAAAGTAGCTATGATGTATTCGTGAAAGCCGAAGGAGGTGGGCTCTCTGGCCAGGCTCAAGCAATTTCCCTCGGCATTGCTCGGGCTCTGCTAAAGGTGAGTGATGATCACAGATCACCTCTAAAGAAAGAGGGGCTTTTGACAAGAGACTCTAGAGTCGTGGAGAGAAAGAAGGCTGGTCTCAAGAAAGCACGTAAAGCCCCACAATTCTCCAAGCGTTGA

Coding sequence (CDS)

ATGGCTACTTCGATATCCTCTCTTGCATTCTCTCTATCTTCTCTCTCCTTTTCTTCCCAAGTATCACATAAGCCAAATGCCCTGTCCTTTCCCCGCTCAAAATCCCTTCTAATTTCCCATGCCTGCTCTACTTCCCCACTTGTAGTATCTGCCTCCGCCGCTGCCGGAGTGGAGACGGCGGACCTTAGGAGCTTCGTCAAATCCAGCCTCCCTGGTGGTTTCGCCGCGCAAACGCTGTTTGGCACTGGTCGCCGGAAATCTGCCGTAGCTCGTGTTGTCCTTCGAGAAGGCACTGGCAAAGTTATTATCAATTATCGCGACGCTAAGGAATACCTTCAAGGAAATCCATTGTGGCTTCAATATGTGAAAGTTCCATTAGTAACATTGGGATATGAAAGTAGCTATGATGTATTCGTGAAAGCCGAAGGAGGTGGGCTCTCTGGCCAGGCTCAAGCAATTTCCCTCGGCATTGCTCGGGCTCTGCTAAAGGTGAGTGATGATCACAGATCACCTCTAAAGAAAGAGGGGCTTTTGACAAGAGACTCTAGAGTCGTGGAGAGAAAGAAGGCTGGTCTCAAGAAAGCACGTAAAGCCCCACAATTCTCCAAGCGTTGA

Protein sequence

MATSISSLAFSLSSLSFSSQVSHKPNALSFPRSKSLLISHACSTSPLVVSASAAAGVETADLRSFVKSSLPGGFAAQTLFGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQYVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTRDSRVVERKKAGLKKARKAPQFSKR
Homology
[Close]
BLAST of Cla97C05G100770 vs. NCBI nr
Match: XP_038903352.1 (30S ribosomal protein S9, chloroplastic [Benincasa hispida])

HSP 1 Score: 364.8 bits (935), Expect = 4.9e-97
Identity = 199/204 (97.55%), Postives = 201/204 (98.53%), Query Frame = 0 

Query: 1   MATSISSLAFSLSSLSFSSQVSHKPNALSFPRSKSLLISHACSTSPLVVSASAAAGVETA 60
           MATS+SSLAFSLSSLSFSSQVSHKPNALSFPRSKSL ISHA ST+PLVVSASAAAGVETA
Sbjct: 1   MATSVSSLAFSLSSLSFSSQVSHKPNALSFPRSKSLQISHASSTTPLVVSASAAAGVETA 60

Query: 61  DLRSFVKSSLPGGFAAQTLFGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ 120
           DLRSFVKSSLPGGFAAQTL GTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ
Sbjct: 61  DLRSFVKSSLPGGFAAQTLIGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ 120

Query: 121 YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180
           YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR
Sbjct: 121 YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180

Query: 181 DSRVVERKKAGLKKARKAPQFSKR 205
           DSRVVERKKAGLKKARKAPQFSKR
Sbjct: 181 DSRVVERKKAGLKKARKAPQFSKR 204

[Close]
BLAST of Cla97C05G100770 vs. NCBI nr
Match: XP_008466625.1 (PREDICTED: 30S ribosomal protein S9, chloroplastic [Cucumis melo] >KAA0051696.1 30S ribosomal protein S9 [Cucumis melo var. makuwa] >TYJ97914.1 30S ribosomal protein S9 [Cucumis melo var. makuwa])

HSP 1 Score: 356.7 bits (914), Expect = 1.3e-94
Identity = 196/204 (96.08%), Postives = 199/204 (97.55%), Query Frame = 0 

Query: 1   MATSISSLAFSLSSLSFSSQVSHKPNALSFPRSKSLLISHACSTSPLVVSASAAAGVETA 60
           MATSISSLAFSLSSLSFSSQVSHKP ALSFPRSKSLLIS + STSPL+VSASAAA VETA
Sbjct: 1   MATSISSLAFSLSSLSFSSQVSHKPTALSFPRSKSLLISPSSSTSPLLVSASAAAAVETA 60

Query: 61  DLRSFVKSSLPGGFAAQTLFGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ 120
           DL+SFVKSSLPGGFAAQTL GTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ
Sbjct: 61  DLKSFVKSSLPGGFAAQTLIGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ 120

Query: 121 YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180
           YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR
Sbjct: 121 YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180

Query: 181 DSRVVERKKAGLKKARKAPQFSKR 205
           DSRVVERKKAGLKKARKAPQFSKR
Sbjct: 181 DSRVVERKKAGLKKARKAPQFSKR 204

[Close]
BLAST of Cla97C05G100770 vs. NCBI nr
Match: XP_022143016.1 (30S ribosomal protein S9, chloroplastic [Momordica charantia])

HSP 1 Score: 351.3 bits (900), Expect = 5.7e-93
Identity = 188/204 (92.16%), Postives = 198/204 (97.06%), Query Frame = 0 

Query: 1   MATSISSLAFSLSSLSFSSQVSHKPNALSFPRSKSLLISHACSTSPLVVSASAAAGVETA 60
           MA+SISSLAFSLSSLSFSSQ+S KPN LSFPRSKSL+ISH C++SPLVVSASAA GVETA
Sbjct: 1   MASSISSLAFSLSSLSFSSQISQKPNGLSFPRSKSLVISHPCNSSPLVVSASAATGVETA 60

Query: 61  DLRSFVKSSLPGGFAAQTLFGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ 120
           +LRSFVKS LPGGFAAQTL GTGRRKSA+ARVV++EGTGKVIINYRDAKEYLQGNPLWLQ
Sbjct: 61  ELRSFVKSRLPGGFAAQTLIGTGRRKSAIARVVIQEGTGKVIINYRDAKEYLQGNPLWLQ 120

Query: 121 YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180
           YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHR+PLKKEGLLTR
Sbjct: 121 YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRAPLKKEGLLTR 180

Query: 181 DSRVVERKKAGLKKARKAPQFSKR 205
           DSRVVERKKAGLKKARKAPQFSKR
Sbjct: 181 DSRVVERKKAGLKKARKAPQFSKR 204

[Close]
BLAST of Cla97C05G100770 vs. NCBI nr
Match: XP_004147796.1 (30S ribosomal protein S9, chloroplastic [Cucumis sativus] >KGN59928.1 hypothetical protein Csa_002564 [Cucumis sativus])

HSP 1 Score: 350.9 bits (899), Expect = 7.4e-93
Identity = 192/204 (94.12%), Postives = 200/204 (98.04%), Query Frame = 0 

Query: 1   MATSISSLAFSLSSLSFSSQVSHKPNALSFPRSKSLLISHACSTSPLVVSASAAAGVETA 60
           MATSISSLAFSLSSLSFSSQVSHKP+ALSFPRSKSLLIS + STS LVV+ASAAA VETA
Sbjct: 1   MATSISSLAFSLSSLSFSSQVSHKPSALSFPRSKSLLISPSSSTSSLVVTASAAAVVETA 60

Query: 61  DLRSFVKSSLPGGFAAQTLFGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ 120
           DL++FVKSSLPGGFAAQTLFGTGRRKSAVARVVLREGTGKVIINYR+AKEYLQGNPLWLQ
Sbjct: 61  DLKTFVKSSLPGGFAAQTLFGTGRRKSAVARVVLREGTGKVIINYREAKEYLQGNPLWLQ 120

Query: 121 YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180
           YVK+PLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR
Sbjct: 121 YVKIPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180

Query: 181 DSRVVERKKAGLKKARKAPQFSKR 205
           D+RVVERKKAGLKKARKAPQFSKR
Sbjct: 181 DARVVERKKAGLKKARKAPQFSKR 204

[Close]
BLAST of Cla97C05G100770 vs. NCBI nr
Match: XP_022940950.1 (30S ribosomal protein S9, chloroplastic [Cucurbita moschata] >KAG6608514.1 30S ribosomal protein S9, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037838.1 30S ribosomal protein S9, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 338.2 bits (866), Expect = 5.0e-89
Identity = 184/204 (90.20%), Postives = 194/204 (95.10%), Query Frame = 0 

Query: 1   MATSISSLAFSLSSLSFSSQVSHKPNALSFPRSKSLLISHACSTSPLVVSASAAAGVETA 60
           MATS+SSLAFSLSSLSFSSQVS  PN+LSFPRSKSL+ISH  S SPLVVSASA + VETA
Sbjct: 1   MATSVSSLAFSLSSLSFSSQVSQMPNSLSFPRSKSLVISHPKSNSPLVVSASATSAVETA 60

Query: 61  DLRSFVKSSLPGGFAAQTLFGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ 120
           +L+++VKS LPGGFAAQTL GTGRRKSAVARVVL+EGTGKVIINYRDAKEYLQGNPLWLQ
Sbjct: 61  ELKNYVKSRLPGGFAAQTLIGTGRRKSAVARVVLQEGTGKVIINYRDAKEYLQGNPLWLQ 120

Query: 121 YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180
           YVKVPL+TLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVS DHRSPLKKEGLLTR
Sbjct: 121 YVKVPLLTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSADHRSPLKKEGLLTR 180

Query: 181 DSRVVERKKAGLKKARKAPQFSKR 205
           DSRVVERKKAGLKKARKAPQFSKR
Sbjct: 181 DSRVVERKKAGLKKARKAPQFSKR 204

[Close]
BLAST of Cla97C05G100770 vs. ExPASy Swiss-Prot
Match: Q9XJ27 (30S ribosomal protein S9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPS9 PE=2 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 1.2e-74
Identity = 154/206 (74.76%), Postives = 173/206 (83.98%), Query Frame = 0 

Query: 4   SISSLAFSLSSLSFSSQVSHKPNALSFPRSKSLLISHACSTSPLVVSASAAAGV-----E 63
           SI++LA SLSSLSFSSQVS +PN +SFPR+ S+    A S     +S +A         E
Sbjct: 3   SITNLASSLSSLSFSSQVSQRPNTISFPRANSVFALPAKSARRASLSITATVSAPPEEEE 62

Query: 64  TADLRSFVKSSLPGGFAAQTLFGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLW 123
             +L+ +VKS LPGGFAAQ + GTGRRK A+ARVVL+EGTGKVIINYRDAKEYLQGNPLW
Sbjct: 63  IVELKKYVKSRLPGGFAAQKIIGTGRRKCAIARVVLQEGTGKVIINYRDAKEYLQGNPLW 122

Query: 124 LQYVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLL 183
           LQYVKVPLVTLGYE+SYD+FVKA GGGLSGQAQAI+LG+ARALLKVS DHRSPLKKEGLL
Sbjct: 123 LQYVKVPLVTLGYENSYDIFVKAHGGGLSGQAQAITLGVARALLKVSADHRSPLKKEGLL 182

Query: 184 TRDSRVVERKKAGLKKARKAPQFSKR 205
           TRD+RVVERKKAGLKKARKAPQFSKR
Sbjct: 183 TRDARVVERKKAGLKKARKAPQFSKR 208

[Close]
BLAST of Cla97C05G100770 vs. ExPASy Swiss-Prot
Match: P82278 (30S ribosomal protein S9, chloroplastic OS=Spinacia oleracea OX=3562 GN=PRPS9 PE=1 SV=2)

HSP 1 Score: 275.8 bits (704), Expect = 4.0e-73
Identity = 150/208 (72.12%), Postives = 170/208 (81.73%), Query Frame = 0 

Query: 1   MATSISSLAFSLSSLSFSSQVSHKPNALSFPRSKSLLISHACSTSPLVVSASAAAG---- 60
           MA SISSL  S +SLSF+S ++ KP  L   R+K   +S+     PLV++A++A      
Sbjct: 1   MAVSISSLTSSFASLSFTSNLTPKPQTLPMARTKPFSLSNPAVVKPLVITATSATAPVEV 60

Query: 61  VETADLRSFVKSSLPGGFAAQTLFGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNP 120
            ETADL  FVKS LPGGFAAQT+ GTGRRK A+ARVVL+EGTGK IINYRDAKEYLQGNP
Sbjct: 61  AETADLEKFVKSRLPGGFAAQTVIGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNP 120

Query: 121 LWLQYVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEG 180
           LWLQYVK PL TLGYE++YDVFVKA GGGLSGQAQAISLG+ARALLKVS  HR+PLK+EG
Sbjct: 121 LWLQYVKTPLATLGYETNYDVFVKAHGGGLSGQAQAISLGVARALLKVSASHRAPLKQEG 180

Query: 181 LLTRDSRVVERKKAGLKKARKAPQFSKR 205
           LLTRDSR+VERKK GLKKARKAPQFSKR
Sbjct: 181 LLTRDSRIVERKKPGLKKARKAPQFSKR 208

[Close]
BLAST of Cla97C05G100770 vs. ExPASy Swiss-Prot
Match: Q8DMK7 (30S ribosomal protein S9 OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=rpsI PE=3 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.5e-35
Identity = 79/124 (63.71%), Postives = 97/124 (78.23%), Query Frame = 0 

Query: 81  GTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQYVKVPLVTLGYESSYDVFVK 140
           GTGRRKSAVARV L  G+G++ IN R+  +YLQ NP++L  VK PL TLG E+SYD++V 
Sbjct: 14  GTGRRKSAVARVRLIPGSGQLWINGRNGADYLQNNPIYLNLVKAPLETLGLENSYDIYVN 73

Query: 141 AEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTRDSRVVERKKAGLKKARKAPQ 200
           A GGGL+GQA AI LGIARAL ++  ++R PLK EG LTRD R  ER+K GL+KARKAPQ
Sbjct: 74  ATGGGLTGQADAIRLGIARALCQLDIENRKPLKTEGYLTRDPRAKERRKYGLRKARKAPQ 133

Query: 201 FSKR 205
           +SKR
Sbjct: 134 YSKR 137

[Close]
BLAST of Cla97C05G100770 vs. ExPASy Swiss-Prot
Match: Q9MUV1 (30S ribosomal protein S9, chloroplastic OS=Mesostigma viride OX=41882 GN=rps9 PE=3 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.5e-35
Identity = 83/124 (66.94%), Postives = 93/124 (75.00%), Query Frame = 0 

Query: 81  GTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQYVKVPLVTLGYESSYDVFVK 140
           GTGRRKSAVARV L  G G+VIIN      YLQ N  +L  V+ PL TLG E +YD+ VK
Sbjct: 14  GTGRRKSAVARVRLVPGNGEVIINGLPGTNYLQFNGSYLSAVRSPLETLGLEDNYDIIVK 73

Query: 141 AEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTRDSRVVERKKAGLKKARKAPQ 200
           A GGGL+GQA+AI LG+ARAL  +   +R PLKKEG LTRDSRV ERKK GLKKARKAPQ
Sbjct: 74  AVGGGLTGQAEAIRLGVARALCTIDTSNRHPLKKEGFLTRDSRVKERKKYGLKKARKAPQ 133

Query: 201 FSKR 205
           FSKR
Sbjct: 134 FSKR 137

[Close]
BLAST of Cla97C05G100770 vs. ExPASy Swiss-Prot
Match: B2ITM7 (30S ribosomal protein S9 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) OX=63737 GN=rpsI PE=3 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.1e-34
Identity = 76/125 (60.80%), Postives = 94/125 (75.20%), Query Frame = 0 

Query: 80  FGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQYVKVPLVTLGYESSYDVFV 139
           +GTGRRK+AVARV L  GTG++ +N +D   Y Q NP +L  +K PL TLG E+ YD+ V
Sbjct: 14  WGTGRRKNAVARVRLVPGTGQLTVNGKDGNLYFQFNPNYLGVIKAPLETLGLENEYDILV 73

Query: 140 KAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTRDSRVVERKKAGLKKARKAP 199
           KAEGGGL+GQA ++ LG+ARAL ++  D+R PLK EG LTRD R  ERKK GL KARKAP
Sbjct: 74  KAEGGGLTGQADSVRLGVARALCQLDPDNRPPLKTEGYLTRDPRAKERKKYGLHKARKAP 133

Query: 200 QFSKR 205
           Q+SKR
Sbjct: 134 QYSKR 138

[Close]
BLAST of Cla97C05G100770 vs. ExPASy TrEMBL
Match: A0A5A7UBW5 (30S ribosomal protein S9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold234G00010 PE=3 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 6.5e-95
Identity = 196/204 (96.08%), Postives = 199/204 (97.55%), Query Frame = 0 

Query: 1   MATSISSLAFSLSSLSFSSQVSHKPNALSFPRSKSLLISHACSTSPLVVSASAAAGVETA 60
           MATSISSLAFSLSSLSFSSQVSHKP ALSFPRSKSLLIS + STSPL+VSASAAA VETA
Sbjct: 1   MATSISSLAFSLSSLSFSSQVSHKPTALSFPRSKSLLISPSSSTSPLLVSASAAAAVETA 60

Query: 61  DLRSFVKSSLPGGFAAQTLFGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ 120
           DL+SFVKSSLPGGFAAQTL GTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ
Sbjct: 61  DLKSFVKSSLPGGFAAQTLIGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ 120

Query: 121 YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180
           YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR
Sbjct: 121 YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180

Query: 181 DSRVVERKKAGLKKARKAPQFSKR 205
           DSRVVERKKAGLKKARKAPQFSKR
Sbjct: 181 DSRVVERKKAGLKKARKAPQFSKR 204

[Close]
BLAST of Cla97C05G100770 vs. ExPASy TrEMBL
Match: A0A1S3CRR0 (30S ribosomal protein S9, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103503984 PE=3 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 6.5e-95
Identity = 196/204 (96.08%), Postives = 199/204 (97.55%), Query Frame = 0 

Query: 1   MATSISSLAFSLSSLSFSSQVSHKPNALSFPRSKSLLISHACSTSPLVVSASAAAGVETA 60
           MATSISSLAFSLSSLSFSSQVSHKP ALSFPRSKSLLIS + STSPL+VSASAAA VETA
Sbjct: 1   MATSISSLAFSLSSLSFSSQVSHKPTALSFPRSKSLLISPSSSTSPLLVSASAAAAVETA 60

Query: 61  DLRSFVKSSLPGGFAAQTLFGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ 120
           DL+SFVKSSLPGGFAAQTL GTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ
Sbjct: 61  DLKSFVKSSLPGGFAAQTLIGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ 120

Query: 121 YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180
           YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR
Sbjct: 121 YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180

Query: 181 DSRVVERKKAGLKKARKAPQFSKR 205
           DSRVVERKKAGLKKARKAPQFSKR
Sbjct: 181 DSRVVERKKAGLKKARKAPQFSKR 204

[Close]
BLAST of Cla97C05G100770 vs. ExPASy TrEMBL
Match: A0A6J1CNY0 (30S ribosomal protein S9, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111013001 PE=3 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 2.7e-93
Identity = 188/204 (92.16%), Postives = 198/204 (97.06%), Query Frame = 0 

Query: 1   MATSISSLAFSLSSLSFSSQVSHKPNALSFPRSKSLLISHACSTSPLVVSASAAAGVETA 60
           MA+SISSLAFSLSSLSFSSQ+S KPN LSFPRSKSL+ISH C++SPLVVSASAA GVETA
Sbjct: 1   MASSISSLAFSLSSLSFSSQISQKPNGLSFPRSKSLVISHPCNSSPLVVSASAATGVETA 60

Query: 61  DLRSFVKSSLPGGFAAQTLFGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ 120
           +LRSFVKS LPGGFAAQTL GTGRRKSA+ARVV++EGTGKVIINYRDAKEYLQGNPLWLQ
Sbjct: 61  ELRSFVKSRLPGGFAAQTLIGTGRRKSAIARVVIQEGTGKVIINYRDAKEYLQGNPLWLQ 120

Query: 121 YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180
           YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHR+PLKKEGLLTR
Sbjct: 121 YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRAPLKKEGLLTR 180

Query: 181 DSRVVERKKAGLKKARKAPQFSKR 205
           DSRVVERKKAGLKKARKAPQFSKR
Sbjct: 181 DSRVVERKKAGLKKARKAPQFSKR 204

[Close]
BLAST of Cla97C05G100770 vs. ExPASy TrEMBL
Match: A0A0A0LDS0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G854240 PE=3 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 3.6e-93
Identity = 192/204 (94.12%), Postives = 200/204 (98.04%), Query Frame = 0 

Query: 1   MATSISSLAFSLSSLSFSSQVSHKPNALSFPRSKSLLISHACSTSPLVVSASAAAGVETA 60
           MATSISSLAFSLSSLSFSSQVSHKP+ALSFPRSKSLLIS + STS LVV+ASAAA VETA
Sbjct: 1   MATSISSLAFSLSSLSFSSQVSHKPSALSFPRSKSLLISPSSSTSSLVVTASAAAVVETA 60

Query: 61  DLRSFVKSSLPGGFAAQTLFGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ 120
           DL++FVKSSLPGGFAAQTLFGTGRRKSAVARVVLREGTGKVIINYR+AKEYLQGNPLWLQ
Sbjct: 61  DLKTFVKSSLPGGFAAQTLFGTGRRKSAVARVVLREGTGKVIINYREAKEYLQGNPLWLQ 120

Query: 121 YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180
           YVK+PLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR
Sbjct: 121 YVKIPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180

Query: 181 DSRVVERKKAGLKKARKAPQFSKR 205
           D+RVVERKKAGLKKARKAPQFSKR
Sbjct: 181 DARVVERKKAGLKKARKAPQFSKR 204

[Close]
BLAST of Cla97C05G100770 vs. ExPASy TrEMBL
Match: A0A6J1FS60 (30S ribosomal protein S9, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111446382 PE=3 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 2.4e-89
Identity = 184/204 (90.20%), Postives = 194/204 (95.10%), Query Frame = 0 

Query: 1   MATSISSLAFSLSSLSFSSQVSHKPNALSFPRSKSLLISHACSTSPLVVSASAAAGVETA 60
           MATS+SSLAFSLSSLSFSSQVS  PN+LSFPRSKSL+ISH  S SPLVVSASA + VETA
Sbjct: 1   MATSVSSLAFSLSSLSFSSQVSQMPNSLSFPRSKSLVISHPKSNSPLVVSASATSAVETA 60

Query: 61  DLRSFVKSSLPGGFAAQTLFGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ 120
           +L+++VKS LPGGFAAQTL GTGRRKSAVARVVL+EGTGKVIINYRDAKEYLQGNPLWLQ
Sbjct: 61  ELKNYVKSRLPGGFAAQTLIGTGRRKSAVARVVLQEGTGKVIINYRDAKEYLQGNPLWLQ 120

Query: 121 YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180
           YVKVPL+TLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVS DHRSPLKKEGLLTR
Sbjct: 121 YVKVPLLTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSADHRSPLKKEGLLTR 180

Query: 181 DSRVVERKKAGLKKARKAPQFSKR 205
           DSRVVERKKAGLKKARKAPQFSKR
Sbjct: 181 DSRVVERKKAGLKKARKAPQFSKR 204

[Close]
BLAST of Cla97C05G100770 vs. TAIR 10
Match: AT1G74970.1 (ribosomal protein S9 )

HSP 1 Score: 280.8 bits (717), Expect = 8.8e-76
Identity = 154/206 (74.76%), Postives = 173/206 (83.98%), Query Frame = 0 

Query: 4   SISSLAFSLSSLSFSSQVSHKPNALSFPRSKSLLISHACSTSPLVVSASAAAGV-----E 63
           SI++LA SLSSLSFSSQVS +PN +SFPR+ S+    A S     +S +A         E
Sbjct: 3   SITNLASSLSSLSFSSQVSQRPNTISFPRANSVFALPAKSARRASLSITATVSAPPEEEE 62

Query: 64  TADLRSFVKSSLPGGFAAQTLFGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLW 123
             +L+ +VKS LPGGFAAQ + GTGRRK A+ARVVL+EGTGKVIINYRDAKEYLQGNPLW
Sbjct: 63  IVELKKYVKSRLPGGFAAQKIIGTGRRKCAIARVVLQEGTGKVIINYRDAKEYLQGNPLW 122

Query: 124 LQYVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLL 183
           LQYVKVPLVTLGYE+SYD+FVKA GGGLSGQAQAI+LG+ARALLKVS DHRSPLKKEGLL
Sbjct: 123 LQYVKVPLVTLGYENSYDIFVKAHGGGLSGQAQAITLGVARALLKVSADHRSPLKKEGLL 182

Query: 184 TRDSRVVERKKAGLKKARKAPQFSKR 205
           TRD+RVVERKKAGLKKARKAPQFSKR
Sbjct: 183 TRDARVVERKKAGLKKARKAPQFSKR 208

[Close]
BLAST of Cla97C05G100770 vs. TAIR 10
Match: AT3G49080.1 (Ribosomal protein S5 domain 2-like superfamily protein )

HSP 1 Score: 85.5 bits (210), Expect = 5.4e-17
Identity = 54/125 (43.20%), Postives = 73/125 (58.40%), Query Frame = 0 

Query: 80  FGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQYVKVPLVTLGYESSYDVFV 139
           +GTGRRK ++ARV ++ G GK  +N ++   Y          ++ PL        +D+  
Sbjct: 307 YGTGRRKCSIARVWIQPGEGKFQVNEKEFDVYFPMLDHRAALLR-PLAETKTLGRWDIKC 366

Query: 140 KAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTRDSRVVERKKAGLKKARKAP 199
             +GGG +GQ  AI LGI+RAL     D R+ L+  G LTRDSRVVERKK G  KARK+ 
Sbjct: 367 TVKGGGTTGQVGAIQLGISRALQNWEPDMRTSLRAAGFLTRDSRVVERKKPGKAKARKSF 426

Query: 200 QFSKR 205
           Q+ KR
Sbjct: 427 QWVKR 430

The following BLAST results are available for this feature:
BLAST of Cla97C05G100770 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038903352.14.9e-9797.5530S ribosomal protein S9, chloroplastic [Benincasa hispida][more]
XP_008466625.11.3e-9496.08PREDICTED: 30S ribosomal protein S9, chloroplastic [Cucumis melo] >KAA0051696.1 ... [more]
XP_022143016.15.7e-9392.1630S ribosomal protein S9, chloroplastic [Momordica charantia][more]
XP_004147796.17.4e-9394.1230S ribosomal protein S9, chloroplastic [Cucumis sativus] >KGN59928.1 hypothetic... [more]
XP_022940950.15.0e-8990.2030S ribosomal protein S9, chloroplastic [Cucurbita moschata] >KAG6608514.1 30S r... [more]
BLAST of Cla97C05G100770 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9XJ271.2e-7474.7630S ribosomal protein S9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPS9 ... [more]
P822784.0e-7372.1230S ribosomal protein S9, chloroplastic OS=Spinacia oleracea OX=3562 GN=PRPS9 PE... [more]
Q8DMK71.5e-3563.7130S ribosomal protein S9 OS=Thermosynechococcus elongatus (strain BP-1) OX=19722... [more]
Q9MUV12.5e-3566.9430S ribosomal protein S9, chloroplastic OS=Mesostigma viride OX=41882 GN=rps9 PE... [more]
B2ITM72.1e-3460.8030S ribosomal protein S9 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) O... [more]
BLAST of Cla97C05G100770 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UBW56.5e-9596.0830S ribosomal protein S9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
A0A1S3CRR06.5e-9596.0830S ribosomal protein S9, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103503984 ... [more]
A0A6J1CNY02.7e-9392.1630S ribosomal protein S9, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111... [more]
A0A0A0LDS03.6e-9394.12Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G854240 PE=3 SV=1[more]
A0A6J1FS602.4e-8990.2030S ribosomal protein S9, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC1114... [more]
BLAST of Cla97C05G100770 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G74970.18.8e-7674.76ribosomal protein S9 [more]
AT3G49080.15.4e-1743.20Ribosomal protein S5 domain 2-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014721Ribosomal protein S5 domain 2-type fold, subgroupGENE3D3.30.230.10coord: 70..204
e-value: 1.8E-49
score: 169.3
IPR000754Ribosomal protein S9PFAMPF00380Ribosomal_S9coord: 83..204
e-value: 1.1E-41
score: 142.2
IPR000754Ribosomal protein S9PANTHERPTHR21569RIBOSOMAL PROTEIN S9coord: 60..204
NoneNo IPR availablePANTHERPTHR21569:SF128S RIBOSOMAL PROTEIN S9, MITOCHONDRIALcoord: 60..204
IPR020574Ribosomal protein S9, conserved sitePROSITEPS00360RIBOSOMAL_S9coord: 143..161
IPR023035Ribosomal protein S9, bacterial/plastidHAMAPMF_00532_BRibosomal_S9_Bcoord: 74..204
score: 32.722252
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 79..204

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C05G100770.1Cla97C05G100770.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0000312 plastid small ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0003729 mRNA binding
molecular_function GO:0003735 structural constituent of ribosome