Cla97C05G091780 (gene) Watermelon (97103) v2.5

Overview
NameCla97C05G091780
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Descriptioncx9C motif-containing protein 4
LocationCla97Chr05: 9792840 .. 9795653 (-)
RNA-Seq ExpressionCla97C05G091780
SyntenyCla97C05G091780
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTCCGCCGAGCAAAGAACCCTGCAAGAAAGAGGCGTGCGACATTCAAGCTTGTCTCTCCAAAAACAACTTTCTTCCTCACAAGTAGGTTTAATTTAAGATTTTTCTTTCCAATTTGTTTCCCGAGGAATCTGCGATGAAAGAAGCTCTAGTTTTTAAGCTATTCATCGATTTAGTCATTTGCATGAATCGGAGGGTACAAGGGTTAATATTCTTGTGTTCCTGTATCTATTAACGAAACTCTGAATTGCTATATATCCTTTCTGCTTTGTGCTTCGTGTTTCTTTGTTCTGTCCTTTGAATTATCAATAGTCTCCCTTTGCCGTGTGAGATCGAACAAAAATTTAATTAAGCAATGAAACAGGACAGCTTCGATGTGGAAAGCATTTGGGTTCTTAGTTTTGACCCGTTTTCTTTCCTCCTCATGTTTGGTTCATTGACCGACGTATTTAGACCAAGTATTGTAATCCTTGATTTGGGAATTTTCGGATAGCTTACTGAGGTCTGTATTTGTGTGCAAGAATTTTGAGTAATTTTGTGTTGCTTTGAACTATCTTTTGTTCATTTTTTAAATTGAGATGTGTTTTCATGTACTTCTGATCTGAAATTTAAAGATACAGCTTATTTCCCACATTCCGAAGATCAAACTTCTTCTTTCTTGCCACAATAGGTTGGTCAGTCCCGAATGATGTCTTCATGATTATAAATGGAAGAAATATTTTTTTTTATGAAATTATGGTTTCTTATGAATTATTTAATTCTCATCCGCTCGTGTATATTCTACTCTGATTTTCAGCCCCTTCCATTAGTTCATGAAGATCATCGAGCTTTCAACATTTCCTAGTTATTCTTGTTGTTTATTTGGGTACCAGAGCGATTAGTTTGTTTGATTTTCCTTTATTATTCCCTGCTAGAGGAATGGGAATTTACTGATGATCTTATTTTTGTTTTCAACAAACCGTCTTCAATTTCTACTTCTGTTACTCCATCTCGCCAATGATAGATTGGCAGTGTAGTCTGTGCCTGTGGAATATGGCATACACAGCTCCTCCTTTGTTCCTCCTTTTTTCTTATTTTATTTCTCTTTATTGTTATCTTTTGGTAGTTTCTTCTGACAAAAGGTATAAATTTGGTGCGTTTGTGCTTGAAGATTGTTAAAAATGTATATAATCAATGAACTTTTTTTTTAACAATTAGATTTTCGTTCAAAGTTTTGAAGCTCACTGGTATTGAGTCATTGACCACATTGACAGGTTTATGTCCTGTATATGTTGAAGTATGTTCTTTTTTATGTTGTATGCGTGAAGTGTCTATCGTAGTTCTATTATTAAACCTGATAAGTGAGAAGTTGGATTTGGATTCAAGTGTATGCTAAAGGATAAGGATATGGCTCTTGGAAAACTTGCCTGCTGACCTAATTGCGTTATTTTAGATAAGTGATATGGCTCTTGGAAACCTGATAAGTGAGAAGTTGGATTTTGACCTTCAAATTGCTGATCAACAAAAAGTTATATGCGTTATTTTAGAGAGACACTTGTATTGAAAGAGAATAATGTCCACCTAGAGGATAGAGAGAATAATCCATCCCCATGTCCAAAAAAGACATGTAGGTACAAATAGAAGCAGCAGCATGGATTCATTATTTTCTAATCTCCCTGAAAGTACAGAATGAAGTGACCTAAAAAAGCCTAGCCTTGAAATTCAACCTGGGACTGTAAAAAATAAACATCTTCAACAGAAATTCTTCATCTCATGGTTTACAATCAGACTTGCCATAAAGCTTTTCCCGAGTTCTAGCAAGAATGTAATGGATAGAGGCTTCAGGGATTTATGTAGATAATGGGATGAGATGTTTTAACCTTTTGAGAGCAAGAAGACGAGGGTAAAGAAGTTGATTTTCTTGGGCATTTCTTAAGTTCCCATTGAGTGATGGTGCTGCTTAAACCCTCAAAAATATATGCATATAAAGAACCTGACAGATCCGGCTTTCAATGTTGTTCTGTTCAGCCACTTCTTTGTTCTGCTTTGTCGCAGCTGCGGCAAACTGGGGAATCTGGAAGCTAGGTCATAGCTCTCCATTCATCTCTCATTCCAAAATCTAGAATCGTCCCATTTTCCAGTTGGAGAGAATGGATAAACACGTTGGTTTACACTAGAGATAAATAGCTCTTCACGTCACGATCCTACTGCATTACATGGTTTGTGATAACGTTGAAGTTTGGTAAATGTCAATATGATGTGGCCATTGCTGTTATATACATGTGGATATCATTGTGCAGTTGAAACTTTCCAGGAAGTATAAAACCTAATACTTCCCTTTGTTCTTTTTCCCTTCAAGAATATTACAACACATATTTACGACCTCTTAAAGTGTTATATAGGTTAAGCAACCTTACCCCCTCCTTGGGAGGAATTGGGATTTTTTTCTTTTTTCTTTTTTTTACTACCAATGTGGATGTGGATCAGCGAAATTCTTTGCTTATTCGTTGTTCTTTGTGAAAATGGCTGATTGTCCTCATGACTAGTCTGCATTGTGCCAGTGCTAGTGTCCATGTTTCCTAGATTTGGTTGTGCAAACAAATATCAACTCTTAGATATTCATAACAATTCTTTGTGTGATGGGGAAGGCTTTTGCAAGTAGATAAATTGATATATTCCTAAGCAATTTGTGCATTGACATGATTGTAGGTGCGTCAGGGTCATTCAACTATTGCAATATTGCTGTGAGAACTGCGATTACAAATCAACACATTGTGCTTCTGTTTCTGACCTCTTGAAGCAAATGCCAAAGCCGAAAAGCCAGCAGCCTTGA

mRNA sequence

ATGCCTCCGCCGAGCAAAGAACCCTGCAAGAAAGAGGCGTGCGACATTCAAGCTTGTCTCTCCAAAAACAACTTTCTTCCTCACAAGTGCGTCAGGGTCATTCAACTATTGCAATATTGCTGTGAGAACTGCGATTACAAATCAACACATTGTGCTTCTGTTTCTGACCTCTTGAAGCAAATGCCAAAGCCGAAAAGCCAGCAGCCTTGA

Coding sequence (CDS)

ATGCCTCCGCCGAGCAAAGAACCCTGCAAGAAAGAGGCGTGCGACATTCAAGCTTGTCTCTCCAAAAACAACTTTCTTCCTCACAAGTGCGTCAGGGTCATTCAACTATTGCAATATTGCTGTGAGAACTGCGATTACAAATCAACACATTGTGCTTCTGTTTCTGACCTCTTGAAGCAAATGCCAAAGCCGAAAAGCCAGCAGCCTTGA

Protein sequence

MPPPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCDYKSTHCASVSDLLKQMPKPKSQQP
Homology
BLAST of Cla97C05G091780 vs. NCBI nr
Match: XP_038884221.1 (cx9C motif-containing protein 4 [Benincasa hispida])

HSP 1 Score: 144.1 bits (362), Expect = 4.6e-31
Identity = 65/68 (95.59%), Postives = 67/68 (98.53%), Query Frame = 0

Query: 1  MPPPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCDYKSTHCASVSDLLKQ 60
          MPPPS+EPCKKEACDIQACLSKNNFLP KCVRVIQLLQYCCENCDYKSTHCASVSDLLKQ
Sbjct: 1  MPPPSREPCKKEACDIQACLSKNNFLPQKCVRVIQLLQYCCENCDYKSTHCASVSDLLKQ 60

Query: 61 MPKPKSQQ 69
          MPKPKSQ+
Sbjct: 61 MPKPKSQK 68

BLAST of Cla97C05G091780 vs. NCBI nr
Match: XP_022136460.1 (cx9C motif-containing protein 4 [Momordica charantia])

HSP 1 Score: 142.5 bits (358), Expect = 1.4e-30
Identity = 64/68 (94.12%), Postives = 66/68 (97.06%), Query Frame = 0

Query: 1  MPPPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCDYKSTHCASVSDLLKQ 60
          MP PSKEPCKKEACDIQACLSKNNFLPHKCV+VIQLLQYCCENCDYKSTHCASVSDLLKQ
Sbjct: 1  MPQPSKEPCKKEACDIQACLSKNNFLPHKCVKVIQLLQYCCENCDYKSTHCASVSDLLKQ 60

Query: 61 MPKPKSQQ 69
          MPKPK Q+
Sbjct: 61 MPKPKGQK 68

BLAST of Cla97C05G091780 vs. NCBI nr
Match: XP_023539532.1 (cx9C motif-containing protein 4, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 141.7 bits (356), Expect = 2.3e-30
Identity = 64/68 (94.12%), Postives = 66/68 (97.06%), Query Frame = 0

Query: 1  MPPPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCDYKSTHCASVSDLLKQ 60
          MP PSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENC+YKSTHCASVSDLLKQ
Sbjct: 13 MPQPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ 72

Query: 61 MPKPKSQQ 69
          MPKPK Q+
Sbjct: 73 MPKPKGQK 80

BLAST of Cla97C05G091780 vs. NCBI nr
Match: XP_022983557.1 (cx9C motif-containing protein 4, mitochondrial [Cucurbita maxima])

HSP 1 Score: 141.7 bits (356), Expect = 2.3e-30
Identity = 64/68 (94.12%), Postives = 66/68 (97.06%), Query Frame = 0

Query: 1  MPPPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCDYKSTHCASVSDLLKQ 60
          MP PSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENC+YKSTHCASVSDLLKQ
Sbjct: 15 MPQPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ 74

Query: 61 MPKPKSQQ 69
          MPKPK Q+
Sbjct: 75 MPKPKGQK 82

BLAST of Cla97C05G091780 vs. NCBI nr
Match: XP_022942264.1 (cx9C motif-containing protein 4 [Cucurbita moschata] >KAG6600374.1 Cx9C motif-containing protein 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031034.1 Cx9C motif-containing protein 4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 141.7 bits (356), Expect = 2.3e-30
Identity = 64/68 (94.12%), Postives = 66/68 (97.06%), Query Frame = 0

Query: 1  MPPPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCDYKSTHCASVSDLLKQ 60
          MP PSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENC+YKSTHCASVSDLLKQ
Sbjct: 1  MPQPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ 60

Query: 61 MPKPKSQQ 69
          MPKPK Q+
Sbjct: 61 MPKPKGQK 68

BLAST of Cla97C05G091780 vs. ExPASy Swiss-Prot
Match: Q61908 (Cx9C motif-containing protein 4 OS=Mus musculus OX=10090 GN=Cmc4 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 4.9e-07
Identity = 22/38 (57.89%), Postives = 28/38 (73.68%), Query Frame = 0

Query: 4  PSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCC 42
          P K+PC+K+AC+IQ CL  NN+L  KC  VIQ L+ CC
Sbjct: 2  PQKDPCQKQACEIQKCLQANNYLESKCQAVIQELRKCC 39

BLAST of Cla97C05G091780 vs. ExPASy Swiss-Prot
Match: Q0VBY0 (Cx9C motif-containing protein 4 OS=Bos taurus OX=9913 GN=CMC4 PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 1.8e-06
Identity = 20/38 (52.63%), Postives = 28/38 (73.68%), Query Frame = 0

Query: 4  PSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCC 42
          P K+PC+K+AC+IQ CL  NN++  KC  VI+ L+ CC
Sbjct: 2  PQKDPCQKQACEIQKCLQANNYMESKCQAVIEELRKCC 39

BLAST of Cla97C05G091780 vs. ExPASy Swiss-Prot
Match: P56277 (Cx9C motif-containing protein 4 OS=Homo sapiens OX=9606 GN=CMC4 PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 3.1e-06
Identity = 20/38 (52.63%), Postives = 28/38 (73.68%), Query Frame = 0

Query: 4  PSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCC 42
          P K+PC+K+AC+IQ CL  N+++  KC  VIQ L+ CC
Sbjct: 2  PQKDPCQKQACEIQKCLQANSYMESKCQAVIQELRKCC 39

BLAST of Cla97C05G091780 vs. ExPASy Swiss-Prot
Match: B5RTE0 (Cx9C motif-containing protein 4, mitochondrial OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=CMC4 PE=3 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 3.5e-05
Identity = 24/58 (41.38%), Postives = 32/58 (55.17%), Query Frame = 0

Query: 7  EPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCC-----ENCDYKSTHCASVSDLLK 60
          +PCK EAC IQ CL +NN+   KC ++I  L  CC     +N   K T C    +LL+
Sbjct: 9  DPCKPEACAIQDCLQQNNYNESKCSKIIDNLYLCCKKYYEKNGSDKQTTCCPKFNLLQ 66

BLAST of Cla97C05G091780 vs. ExPASy TrEMBL
Match: A0A6J1C3Y6 (cx9C motif-containing protein 4 OS=Momordica charantia OX=3673 GN=LOC111008166 PE=3 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 6.5e-31
Identity = 64/68 (94.12%), Postives = 66/68 (97.06%), Query Frame = 0

Query: 1  MPPPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCDYKSTHCASVSDLLKQ 60
          MP PSKEPCKKEACDIQACLSKNNFLPHKCV+VIQLLQYCCENCDYKSTHCASVSDLLKQ
Sbjct: 1  MPQPSKEPCKKEACDIQACLSKNNFLPHKCVKVIQLLQYCCENCDYKSTHCASVSDLLKQ 60

Query: 61 MPKPKSQQ 69
          MPKPK Q+
Sbjct: 61 MPKPKGQK 68

BLAST of Cla97C05G091780 vs. ExPASy TrEMBL
Match: A0A6J1IZQ2 (cx9C motif-containing protein 4, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111482123 PE=3 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.1e-30
Identity = 64/68 (94.12%), Postives = 66/68 (97.06%), Query Frame = 0

Query: 1  MPPPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCDYKSTHCASVSDLLKQ 60
          MP PSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENC+YKSTHCASVSDLLKQ
Sbjct: 15 MPQPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ 74

Query: 61 MPKPKSQQ 69
          MPKPK Q+
Sbjct: 75 MPKPKGQK 82

BLAST of Cla97C05G091780 vs. ExPASy TrEMBL
Match: A0A6J1FQS9 (cx9C motif-containing protein 4 OS=Cucurbita moschata OX=3662 GN=LOC111447360 PE=3 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.1e-30
Identity = 64/68 (94.12%), Postives = 66/68 (97.06%), Query Frame = 0

Query: 1  MPPPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCDYKSTHCASVSDLLKQ 60
          MP PSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENC+YKSTHCASVSDLLKQ
Sbjct: 1  MPQPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ 60

Query: 61 MPKPKSQQ 69
          MPKPK Q+
Sbjct: 61 MPKPKGQK 68

BLAST of Cla97C05G091780 vs. ExPASy TrEMBL
Match: A0A1S3C3J8 (cx9C motif-containing protein 4 OS=Cucumis melo OX=3656 GN=LOC103496091 PE=3 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.2e-27
Identity = 62/68 (91.18%), Postives = 65/68 (95.59%), Query Frame = 0

Query: 1  MPPPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCDYKSTHCASVSDLLKQ 60
          MP PSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQ CCE+CDYKSTHCASVSDLLKQ
Sbjct: 1  MPQPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQLCCEDCDYKSTHCASVSDLLKQ 60

Query: 61 MPKPKSQQ 69
          + KPKSQ+
Sbjct: 61 I-KPKSQK 67

BLAST of Cla97C05G091780 vs. ExPASy TrEMBL
Match: A0A0A0LC41 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G228340 PE=3 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 3.4e-27
Identity = 60/68 (88.24%), Postives = 64/68 (94.12%), Query Frame = 0

Query: 1  MPPPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCDYKSTHCASVSDLLKQ 60
          MPPP KEPCKKEACDIQACL+KNNFLPHKCVRVIQLLQ+CCENCDYKSTHCASVS LLKQ
Sbjct: 1  MPPPIKEPCKKEACDIQACLTKNNFLPHKCVRVIQLLQHCCENCDYKSTHCASVSGLLKQ 60

Query: 61 MPKPKSQQ 69
          + KPK Q+
Sbjct: 61 I-KPKGQK 67

BLAST of Cla97C05G091780 vs. TAIR 10
Match: AT1G09794.1 (Cox19 family protein (CHCH motif) )

HSP 1 Score: 103.2 bits (256), Expect = 8.5e-23
Identity = 46/63 (73.02%), Postives = 53/63 (84.13%), Query Frame = 0

Query: 1  MPPPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCDYKSTHCASVSDLLKQ 60
          M  PSKEPCKKEACDIQACLSKNNFLP +C RVI++LQ CCE C+ +STHC SV+ LLKQ
Sbjct: 1  MAQPSKEPCKKEACDIQACLSKNNFLPQRCQRVIEMLQACCERCNNESTHCGSVAALLKQ 60

Query: 61 MPK 64
          + K
Sbjct: 61 IKK 63

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038884221.14.6e-3195.59cx9C motif-containing protein 4 [Benincasa hispida][more]
XP_022136460.11.4e-3094.12cx9C motif-containing protein 4 [Momordica charantia][more]
XP_023539532.12.3e-3094.12cx9C motif-containing protein 4, mitochondrial [Cucurbita pepo subsp. pepo][more]
XP_022983557.12.3e-3094.12cx9C motif-containing protein 4, mitochondrial [Cucurbita maxima][more]
XP_022942264.12.3e-3094.12cx9C motif-containing protein 4 [Cucurbita moschata] >KAG6600374.1 Cx9C motif-co... [more]
Match NameE-valueIdentityDescription
Q619084.9e-0757.89Cx9C motif-containing protein 4 OS=Mus musculus OX=10090 GN=Cmc4 PE=2 SV=1[more]
Q0VBY01.8e-0652.63Cx9C motif-containing protein 4 OS=Bos taurus OX=9913 GN=CMC4 PE=3 SV=1[more]
P562773.1e-0652.63Cx9C motif-containing protein 4 OS=Homo sapiens OX=9606 GN=CMC4 PE=1 SV=1[more]
B5RTE03.5e-0541.38Cx9C motif-containing protein 4, mitochondrial OS=Debaryomyces hansenii (strain ... [more]
Match NameE-valueIdentityDescription
A0A6J1C3Y66.5e-3194.12cx9C motif-containing protein 4 OS=Momordica charantia OX=3673 GN=LOC111008166 P... [more]
A0A6J1IZQ21.1e-3094.12cx9C motif-containing protein 4, mitochondrial OS=Cucurbita maxima OX=3661 GN=LO... [more]
A0A6J1FQS91.1e-3094.12cx9C motif-containing protein 4 OS=Cucurbita moschata OX=3662 GN=LOC111447360 PE... [more]
A0A1S3C3J81.2e-2791.18cx9C motif-containing protein 4 OS=Cucumis melo OX=3656 GN=LOC103496091 PE=3 SV=... [more]
A0A0A0LC413.4e-2788.24Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G228340 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT1G09794.18.5e-2373.02Cox19 family protein (CHCH motif) [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.287.1130CytochromE C oxidase copper chaperonecoord: 3..68
e-value: 1.3E-16
score: 62.3
IPR027179Mature-T-Cell Proliferation I typePFAMPF08991MTCP1coord: 8..61
e-value: 8.8E-14
score: 51.5
IPR027179Mature-T-Cell Proliferation I typePANTHERPTHR15590CX9C MOTIF-CONTAINING PROTEIN 4coord: 3..63
IPR009069Cysteine alpha-hairpin motif superfamilySUPERFAMILY47072Cysteine alpha-hairpin motifcoord: 5..63

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C05G091780.1Cla97C05G091780.1mRNA