Cla97C05G085980 (gene) Watermelon (97103) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGATCACTTCCCCCTCTCCATCCATCCAATTATTATTACCATTTCTCTCTTCTTCTCGTTCTCTTCGCTTTCGCCGCTTTACTCTCCGCCTCTCCAGGTAAATTTACTATTATTAACCCATCACCTTAAATTTTTTTTTTTTTCAAAAAACTAAAAAATTGAAAAATGAACTAAATTATACACTAACGTGTCAGACAGCGGAGGGTGGGTTGGGGATAAGAAGATCTTGGTTGGACCAGGATCGTCGCCGCCGACGTGTCGATTTAAGTGTGGGAAATGCTGGCCCTGTGAACCGGTTCATGTTCCAATTCAACCGGGTTTGAGTGTGCCATTGGAGTATTACCCTGAAGCTTGGAGATGCAAGTGTGGGAATAAGTTGTTCATGCCTTGA ATGGGATCACTTCCCCCTCTCCATCCATCCAATTATTATTACCATTTCTCTCTTCTTCTCGTTCTCTTCGCTTTCGCCGCTTTACTCTCCGCCTCTCCAGACAGCGGAGGGTGGGTTGGGGATAAGAAGATCTTGGTTGGACCAGGATCGTCGCCGCCGACGTGTCGATTTAAGTGTGGGAAATGCTGGCCCTGTGAACCGGTTCATGTTCCAATTCAACCGGGTTTGAGTGTGCCATTGGAGTATTACCCTGAAGCTTGGAGATGCAAGTGTGGGAATAAGTTGTTCATGCCTTGA ATGGGATCACTTCCCCCTCTCCATCCATCCAATTATTATTACCATTTCTCTCTTCTTCTCGTTCTCTTCGCTTTCGCCGCTTTACTCTCCGCCTCTCCAGACAGCGGAGGGTGGGTTGGGGATAAGAAGATCTTGGTTGGACCAGGATCGTCGCCGCCGACGTGTCGATTTAAGTGTGGGAAATGCTGGCCCTGTGAACCGGTTCATGTTCCAATTCAACCGGGTTTGAGTGTGCCATTGGAGTATTACCCTGAAGCTTGGAGATGCAAGTGTGGGAATAAGTTGTTCATGCCTTGA MGSLPPLHPSNYYYHFSLLLVLFAFAALLSASPDSGGWVGDKKILVGPGSSPPTCRFKCGKCWPCEPVHVPIQPGLSVPLEYYPEAWRCKCGNKLFMP Homology
BLAST of Cla97C05G085980 vs. NCBI nr
Match: XP_038905188.1 (EPIDERMAL PATTERNING FACTOR-like protein 4 [Benincasa hispida]) HSP 1 Score: 175.3 bits (443), Expect = 2.7e-40 Identity = 77/94 (81.91%), Postives = 83/94 (88.30%), Query Frame = 0
BLAST of Cla97C05G085980 vs. NCBI nr
Match: KGN56945.1 (hypothetical protein Csa_009821 [Cucumis sativus]) HSP 1 Score: 155.2 bits (391), Expect = 2.9e-34 Identity = 75/107 (70.09%), Postives = 86/107 (80.37%), Query Frame = 0
BLAST of Cla97C05G085980 vs. NCBI nr
Match: XP_008438622.1 (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 4 [Cucumis melo]) HSP 1 Score: 153.7 bits (387), Expect = 8.3e-34 Identity = 75/113 (66.37%), Postives = 86/113 (76.11%), Query Frame = 0
BLAST of Cla97C05G085980 vs. NCBI nr
Match: KAG6597420.1 (EPIDERMAL PATTERNING FACTOR-like protein 4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 132.1 bits (331), Expect = 2.6e-27 Identity = 61/95 (64.21%), Postives = 74/95 (77.89%), Query Frame = 0
BLAST of Cla97C05G085980 vs. NCBI nr
Match: KAG7615994.1 (hypothetical protein ISN45_At04g015230 [Arabidopsis thaliana x Arabidopsis arenosa] >KAG7620481.1 hypothetical protein ISN44_As04g014810 [Arabidopsis suecica] >OAO99753.1 EPFL4 [Arabidopsis thaliana] >CAA0395255.1 unnamed protein product [Arabidopsis thaliana] >CAD5327928.1 unnamed protein product [Arabidopsis thaliana]) HSP 1 Score: 127.9 bits (320), Expect = 4.9e-26 Identity = 59/90 (65.56%), Postives = 68/90 (75.56%), Query Frame = 0
BLAST of Cla97C05G085980 vs. ExPASy Swiss-Prot
Match: Q2V3I3 (EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=EPFL4 PE=1 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 3.2e-28 Identity = 58/90 (64.44%), Postives = 67/90 (74.44%), Query Frame = 0
BLAST of Cla97C05G085980 vs. ExPASy Swiss-Prot
Match: Q9LUH9 (EPIDERMAL PATTERNING FACTOR-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=EPFL5 PE=1 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 4.3e-25 Identity = 48/62 (77.42%), Postives = 52/62 (83.87%), Query Frame = 0
BLAST of Cla97C05G085980 vs. ExPASy Swiss-Prot
Match: Q1PEY6 (EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EPFL6 PE=1 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 4.9e-21 Identity = 40/57 (70.18%), Postives = 46/57 (80.70%), Query Frame = 0
BLAST of Cla97C05G085980 vs. ExPASy Swiss-Prot
Match: Q9FY19 (Polygalacturonase OS=Juniperus ashei OX=13101 GN=JNA2 PE=1 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 9.6e-09 Identity = 24/58 (41.38%), Postives = 35/58 (60.34%), Query Frame = 0
BLAST of Cla97C05G085980 vs. ExPASy Swiss-Prot
Match: Q7M1E7 (Polygalacturonase OS=Chamaecyparis obtusa OX=13415 PE=1 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 4.8e-08 Identity = 22/49 (44.90%), Postives = 31/49 (63.27%), Query Frame = 0
BLAST of Cla97C05G085980 vs. ExPASy TrEMBL
Match: A0A0A0L4P0 (Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G146310 PE=3 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 1.4e-34 Identity = 75/107 (70.09%), Postives = 86/107 (80.37%), Query Frame = 0
BLAST of Cla97C05G085980 vs. ExPASy TrEMBL
Match: A0A1S3AWH2 (Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103483678 PE=3 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 4.0e-34 Identity = 75/113 (66.37%), Postives = 86/113 (76.11%), Query Frame = 0
BLAST of Cla97C05G085980 vs. ExPASy TrEMBL
Match: A0A178V213 (Epidermal patterning factor-like protein OS=Arabidopsis thaliana OX=3702 GN=AXX17_At4g17010 PE=3 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 2.4e-26 Identity = 59/90 (65.56%), Postives = 68/90 (75.56%), Query Frame = 0
BLAST of Cla97C05G085980 vs. ExPASy TrEMBL
Match: A0A6D2KFV2 (Epidermal patterning factor-like protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS40611 PE=3 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 5.3e-26 Identity = 60/94 (63.83%), Postives = 68/94 (72.34%), Query Frame = 0
BLAST of Cla97C05G085980 vs. ExPASy TrEMBL
Match: V4P8Z8 (Epidermal patterning factor-like protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10026630mg PE=3 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 5.3e-26 Identity = 59/92 (64.13%), Postives = 65/92 (70.65%), Query Frame = 0
BLAST of Cla97C05G085980 vs. TAIR 10
Match: AT4G14723.1 (BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 125.6 bits (314), Expect = 2.3e-29 Identity = 58/90 (64.44%), Postives = 67/90 (74.44%), Query Frame = 0
BLAST of Cla97C05G085980 vs. TAIR 10
Match: AT3G22820.1 (allergen-related ) HSP 1 Score: 115.2 bits (287), Expect = 3.1e-26 Identity = 48/62 (77.42%), Postives = 52/62 (83.87%), Query Frame = 0
BLAST of Cla97C05G085980 vs. TAIR 10
Match: AT2G30370.1 (allergen-related ) HSP 1 Score: 101.7 bits (252), Expect = 3.5e-22 Identity = 40/57 (70.18%), Postives = 46/57 (80.70%), Query Frame = 0
BLAST of Cla97C05G085980 vs. TAIR 10
Match: AT2G30370.2 (allergen-related ) HSP 1 Score: 101.7 bits (252), Expect = 3.5e-22 Identity = 40/57 (70.18%), Postives = 46/57 (80.70%), Query Frame = 0
BLAST of Cla97C05G085980 vs. TAIR 10
Match: AT1G80133.1 (unknown protein; LOCATED IN: endomembrane system; Has 154 Blast hits to 154 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 154; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 45.4 bits (106), Expect = 3.0e-05 Identity = 30/86 (34.88%), Postives = 39/86 (45.35%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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