Cla97C05G081930 (gene) Watermelon (97103) v2.5

Overview
NameCla97C05G081930
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionC2 domain-containing protein
LocationCla97Chr05: 1504234 .. 1507150 (-)
RNA-Seq ExpressionCla97C05G081930
SyntenyCla97C05G081930
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGTGATATTGGGATCGTCTGGAAGTTGTTTTATCAGATACCTTACAAGGATGTTGTTTTGTGGAGTGTCATGATCTCAGCATGCGTGAAAAATGGTCAGTATAATGAAGCATTTGATATTTTCAGAGAGATGCAAAATCAGGGAGGTTCAACCAAACCAAGTAAGTATTTTACCTGCTTGTGCTGATTTTGGTGTGCGTTTTCAATGAGAAGAAAATTGTAAGTCTACTGAATGCTTGTTCTTAATTGGGCGCTCAGGAGCTGGGAGAAAGTATCCAAGCTCATATAACAAAATGGGGGTACTCATCTAATACACATTTGATGTCAGCTTTGGTTGTTTTTTACTGCACACTTGGAAGGATAAAGCTAGGAAAACATGTTTTTGATGAGATTTCAACGAAGGAAGTAATTTGTTTGAGTTCGACGATTAAGGGTACGGAATGAATGGATGTGGGAGTGAGGCACTCAATACATTTTCAGACATGTTAAGTTATGGTTTAAAGCCTAATGGGGTGGTCTTCGTCTCTCTTTTATCTGCTTGTGCTCATTGTGGATTGGAAAAGGAAGGTTGGATATGGTTTCATTCGATGATTGACAAGTATGGCATTACTCCAATGGTGGCACATTATGCTTGTATCGTAGCTCATTCGGCAAGGAAAAATTAGAGAAGCTGTTAAATTTGTGAAGAAATGCCGGTAGAACCTGATACAGGAATCTGGGGTGCTCTTTTTTTCTGGTAGCAAATTAACTCATAGGCCCTGACATTGCAGATTCTTTTGTAAACAGCTCACTGATTGAAAATCCTAACAATATGCAATGTTACTCAACTTTTGTGCCGAGGAAAACAAATGGGAAGATACCCAATAAGGAATTTTGCTACCTTAAGATCGTTATAGTTATGGTCGCTGTTCCTCGGGGCTTCAGTTGCCGGCTCCCCTATTATGAGGTCACCAACTTCTTTGACTTTTTGGCACTGGGAAGGCGTCATACATGGTCTTACGGCTTTGCAAAGTCCTGTGTTTTTGGCAAATAATCGTCTGGGCCTAGTTACTGCAACCCCTTCTTCCATGTCAAGGCTCTTACTGTATCCAGTTGGAAAACTGATGGATGCACGGAAATTTGTCAGGTAACTCATACAGCTGATTTAGTGACTTCAACGTATTCATGTTTACTGATGATCATTGAATTCCATTAAATGTTGTGAGTTTATCTTTAATTTCAATGGAATTAATGACCTTAGTAGTTTTTATTTGCTTGAAACATCACTATGCCATAACACAACCTATCTATTTATGGCGTATGAAAAATGGTAGAGGATGTAGAGGAGCATCACAATAACCTACAAAATCGTTTGTTGAAAACATCTTTGGCCTTCTGCTTGAAGGTTCAAGCTATCCAATACATAATTCATGAAGGGGGGAATTCTTGAAGTGTTTCTTGTCAATGCCAAAGACATCAGACACACCAATCGACTTGGTACTCTCTTCTCTTATAGACTTTTTATTCTCTTATAGACATTTTCCTTTTATGCTGACCCATGTTGAGGAAGCGACTAGAGATGATCACAGCCCGTCTCGGCCCCCTACGTCCATTCTCATCCTTGCAAAATTTTCTGTTTAGTTTTACAAGATCGAGAAATTCATTTCCCGCCGGGATCGAGTTCCTATAGGAAAAAATCTTCATTCTTTTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAATCCTCAACCAAATAAAAATTTCAATAATTTTGATGTATAAGTGGACCCTTTCCAATATAATTTTCACTTAAATAAAACATTATAAAATTTCCTAAAAAAAACAGTGATATTCAATGTGCAAATAAATAATTAAAATCGTCAATCTCCATAATTTCTAAATGTTAAAATTTAAATATTAGAATAACGTAAACCTCTAATTTCAAAGGGCTTTTTATTTATCATATAATAATGATGACAATAATAATAATTGAACCCGTGTAGCCAACAGGGGGAAATTTCTTCCCGCTCGCACCCCCATCCCTTGTGTAATTGAAGATTCCCAACCCTGCAAAAGTTTGACAATCATGGTGTGGGAATCAAACCAATCTGCTTGAATTTGCATATGGTTTAGAGCTCGTAAGTTTGAAAATATCAGTAAATGCTTTAGGTTCCCCAGCATATTACGTGATGGTAGAATGTGGAAATCATGAACGTAGAACAAGAGTATCATCAGGTTAGCTCCTCCTTGCCCATTTCTCCCATGGTAATTTCGAATGCTTTCACGAGGTCAGGGCTTTGATTGTGTTCTGTGAACATAGGTAAACATGAATTTGCTTGTTGGAATGAGAAGTTTTCATTTGAACTCCCTACATCTGATTGGAAGAACATAACTCATATCAAATTCAGAATCATGGAAACAAAATTGCTGAACAATGAAACCGTCGGAGCTACCGTGTATGAATCTTCTTTTTCTATGTAGAACTTTTATACTTCTACTCATTGAAGCCTTATTTTTTATGTTTTTCATGTTCCAACTTGAACATAGCAGAATCCACCTTGGTGGAATAATTTCAGAGGGTTATGAAAGAGGATTCATAGAAGTTAGGCCAGCTCCATACAACGTGGTGCTCGAGGACGACGACACTTACAAGGGAGAAATAAAAGTAGGATTCAAATTCTTCACCAAAGTAAGATGCATATATTAATCTCGTTATATCCATCAAATAGTTATAATTATTATTGTAAGTTATTGCAATTTCTTTACTTTTCCAGGAAGAAATAACACTAATGGAAGCAAGAGAGTTACTTGCAGATGGGAAGCAGCAAAGAAAACCTATCTGCAGCGAAGTTATGAACTTGTGGAGAATTGTATGGTTAAAGTTATTGTGCCTCATTGGCCACAAGAATTCTTCCAGTGAACGAAAGCAACAGTAA

mRNA sequence

ATGCGTGATATTGGGATCGTCTGGAAGTTGTTTTATCAGATACCTTACAAGGATGTTGTTTTGTGGAGTGTCATGATCTCAGCATGCGTGAAAAATGGTCAGTATAATGAAGCATTTGATATTTTCAGAGAGATGCAAAATCAGGGAGGTTCAACCAAACCAAGTTCCCCAGCATATTACGTGATGGTAGAATGTGGAAATCATGAACGTAGAACAAGAGTATCATCAGGTAAACATGAATTTGCTTGTTGGAATGAGAAGTTTTCATTTGAACTCCCTACATCTGATTGGAAGAACATAACTCATATCAAATTCAGAATCATGGAAACAAAATTGCTGAACAATGAAACCGTCGGAGCTACCGTAATCCACCTTGGTGGAATAATTTCAGAGGGTTATGAAAGAGGATTCATAGAAGTTAGGCCAGCTCCATACAACGTGGTGCTCGAGGACGACGACACTTACAAGGGAGAAATAAAAGTAGGATTCAAATTCTTCACCAAAGAAGAAATAACACTAATGGAAGCAAGAGAGTTACTTGCAGATGGGAAGCAGCAAAGAAAACCTATCTGCAGCGAAGTTATGAACTTGTGGAGAATTGTATGGTTAAAGTTATTGTGCCTCATTGGCCACAAGAATTCTTCCAGTGAACGAAAGCAACAGTAA

Coding sequence (CDS)

ATGCGTGATATTGGGATCGTCTGGAAGTTGTTTTATCAGATACCTTACAAGGATGTTGTTTTGTGGAGTGTCATGATCTCAGCATGCGTGAAAAATGGTCAGTATAATGAAGCATTTGATATTTTCAGAGAGATGCAAAATCAGGGAGGTTCAACCAAACCAAGTTCCCCAGCATATTACGTGATGGTAGAATGTGGAAATCATGAACGTAGAACAAGAGTATCATCAGGTAAACATGAATTTGCTTGTTGGAATGAGAAGTTTTCATTTGAACTCCCTACATCTGATTGGAAGAACATAACTCATATCAAATTCAGAATCATGGAAACAAAATTGCTGAACAATGAAACCGTCGGAGCTACCGTAATCCACCTTGGTGGAATAATTTCAGAGGGTTATGAAAGAGGATTCATAGAAGTTAGGCCAGCTCCATACAACGTGGTGCTCGAGGACGACGACACTTACAAGGGAGAAATAAAAGTAGGATTCAAATTCTTCACCAAAGAAGAAATAACACTAATGGAAGCAAGAGAGTTACTTGCAGATGGGAAGCAGCAAAGAAAACCTATCTGCAGCGAAGTTATGAACTTGTGGAGAATTGTATGGTTAAAGTTATTGTGCCTCATTGGCCACAAGAATTCTTCCAGTGAACGAAAGCAACAGTAA

Protein sequence

MRDIGIVWKLFYQIPYKDVVLWSVMISACVKNGQYNEAFDIFREMQNQGGSTKPSSPAYYVMVECGNHERRTRVSSGKHEFACWNEKFSFELPTSDWKNITHIKFRIMETKLLNNETVGATVIHLGGIISEGYERGFIEVRPAPYNVVLEDDDTYKGEIKVGFKFFTKEEITLMEARELLADGKQQRKPICSEVMNLWRIVWLKLLCLIGHKNSSSERKQQ
Homology
[Close]
BLAST of Cla97C05G081930 vs. NCBI nr
Match: XP_016898949.1 (PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g56570 [Cucumis melo])

HSP 1 Score: 315.5 bits (807), Expect = 3.7e-82
Identity = 147/166 (88.55%), Postives = 155/166 (93.37%), Query Frame = 0 

Query: 56  SPAYYVMVECGNHERRTRVSSGKHEFACWNEKFSFELPTSDWKNITHIKFRIMETKLLNN 115
           SPAYYV VECGNHE RT+VSSGKHE ACWNEKFSFELPTSDWKNITHIKFRIMETKLLNN
Sbjct: 659 SPAYYVTVECGNHEHRTKVSSGKHELACWNEKFSFELPTSDWKNITHIKFRIMETKLLNN 718

Query: 116 ETVGATVIHLGGIISEGYERGFIEVRPAPYNVVLEDDDTYKGEIKVGFKFFTKEEITLME 175
           E+VGATVIHLGGI+SEGYERGFIEVRPAPYNVVLE+D+TYKGEIK+GFKFF KEEI LME
Sbjct: 719 ESVGATVIHLGGIVSEGYERGFIEVRPAPYNVVLEEDNTYKGEIKIGFKFFIKEEIALME 778

Query: 176 ARELLADGKQQRKPICSEVMNLWRIVWLKLLCLIGHKNSSSERKQQ 222
           ARE +ADGK QRKPICS+ MNLWRIVWLKL C IGHKNSSSERK Q
Sbjct: 779 ARESIADGKLQRKPICSKAMNLWRIVWLKLSCFIGHKNSSSERKTQ 824

[Close]
BLAST of Cla97C05G081930 vs. NCBI nr
Match: XP_016898949.1 (PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g56570 [Cucumis melo])

HSP 1 Score: 82.0 bits (201), Expect = 6.9e-12
Identity = 37/49 (75.51%), Postives = 42/49 (85.71%), Query Frame = 0 

Query: 1   MRDIGIVWKLFYQIPYKDVVLWSVMISACVKNGQYNEAFDIFREMQNQG 50
           +RDI  VWKLF QIP KDVV WS +ISACVKNGQY+EAFD+ REMQ+QG
Sbjct: 133 IRDIETVWKLFNQIPCKDVVFWSAIISACVKNGQYSEAFDLLREMQDQG 181


HSP 2 Score: 315.5 bits (807), Expect = 3.7e-82
Identity = 147/166 (88.55%), Postives = 155/166 (93.37%), Query Frame = 0 

Query: 56  SPAYYVMVECGNHERRTRVSSGKHEFACWNEKFSFELPTSDWKNITHIKFRIMETKLLNN 115
           SPAYYV VECGNHE RT+VSSGKHE ACWNEKFSFELPTSDWKNITHIKFRIMETKLLNN
Sbjct: 567 SPAYYVTVECGNHEHRTKVSSGKHELACWNEKFSFELPTSDWKNITHIKFRIMETKLLNN 626

Query: 116 ETVGATVIHLGGIISEGYERGFIEVRPAPYNVVLEDDDTYKGEIKVGFKFFTKEEITLME 175
           E+VGATVIHLGGI+SEGYERGFIEVRPAPYNVVLE+D+TYKGEIK+GFKFF KEEI LME
Sbjct: 627 ESVGATVIHLGGIVSEGYERGFIEVRPAPYNVVLEEDNTYKGEIKIGFKFFIKEEIALME 686

Query: 176 ARELLADGKQQRKPICSEVMNLWRIVWLKLLCLIGHKNSSSERKQQ 222
           ARE +ADGK QRKPICS+ MNLWRIVWLKL C IGHKNSSSERK Q
Sbjct: 687 ARESIADGKLQRKPICSKAMNLWRIVWLKLSCFIGHKNSSSERKTQ 732

[Close]
BLAST of Cla97C05G081930 vs. NCBI nr
Match: KAA0048969.1 (putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 82.0 bits (201), Expect = 6.9e-12
Identity = 37/49 (75.51%), Postives = 42/49 (85.71%), Query Frame = 0 

Query: 1   MRDIGIVWKLFYQIPYKDVVLWSVMISACVKNGQYNEAFDIFREMQNQG 50
           +RDI  VWKLF QIP KDVV WS +ISACVKNGQY+EAFD+ REMQ+QG
Sbjct: 108 IRDIETVWKLFNQIPCKDVVFWSAIISACVKNGQYSEAFDLLREMQDQG 156


HSP 2 Score: 315.5 bits (807), Expect = 3.7e-82
Identity = 146/166 (87.95%), Postives = 158/166 (95.18%), Query Frame = 0 

Query: 56  SPAYYVMVECGNHERRTRVSSGKHEFACWNEKFSFELPTSDWKNITHIKFRIMETKLLNN 115
           SPAYYVMVECGNHE RT+VSSGKHE+ACWNEKFSFELPT+DWKNI+HIKFRI+ETKLL+N
Sbjct: 647 SPAYYVMVECGNHEHRTKVSSGKHEYACWNEKFSFELPTTDWKNISHIKFRIIETKLLSN 706

Query: 116 ETVGATVIHLGGIISEGYERGFIEVRPAPYNVVLEDDDTYKGEIKVGFKFFTKEEITLME 175
           E+VGATVIHL GIISEGYERGFIEVRPAPYNVVLEDDDTYKGEIK+GFKFFTKEEI LME
Sbjct: 707 ESVGATVIHLRGIISEGYERGFIEVRPAPYNVVLEDDDTYKGEIKIGFKFFTKEEIALME 766

Query: 176 ARELLADGKQQRKPICSEVMNLWRIVWLKLLCLIGHKNSSSERKQQ 222
            RE +ADGK QRKPICS +MN+WRIVWLKLL LIGH+NSSSERKQQ
Sbjct: 767 EREFIADGKLQRKPICSNIMNIWRIVWLKLLYLIGHRNSSSERKQQ 812

[Close]
BLAST of Cla97C05G081930 vs. NCBI nr
Match: XP_038885271.1 (LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At3g01580 [Benincasa hispida])

HSP 1 Score: 104.8 bits (260), Expect = 1.0e-18
Identity = 47/49 (95.92%), Postives = 48/49 (97.96%), Query Frame = 0 

Query: 1   MRDIGIVWKLFYQIPYKDVVLWSVMISACVKNGQYNEAFDIFREMQNQG 50
           MRDIGIVWKLFYQIPYKDVVLWS MISACVKNGQYNEAFD+FREMQNQG
Sbjct: 133 MRDIGIVWKLFYQIPYKDVVLWSAMISACVKNGQYNEAFDLFREMQNQG 181


HSP 2 Score: 310.8 bits (795), Expect = 9.2e-81
Identity = 145/166 (87.35%), Postives = 153/166 (92.17%), Query Frame = 0 

Query: 56  SPAYYVMVECGNHERRTRVSSGKHEFACWNEKFSFELPTSDWKNITHIKFRIMETKLLNN 115
           SPAYYV VECGNHE RT+VSSGKHE ACWNEKFSFELPTS WKNITHIKFRIMETKLLNN
Sbjct: 89  SPAYYVTVECGNHEHRTKVSSGKHELACWNEKFSFELPTSGWKNITHIKFRIMETKLLNN 148

Query: 116 ETVGATVIHLGGIISEGYERGFIEVRPAPYNVVLEDDDTYKGEIKVGFKFFTKEEITLME 175
           E+VGATVIHLGGI+SEGYERGFIEVRPAPYNVVLE+D+TYKGEIK+GFKFF KEEI LME
Sbjct: 149 ESVGATVIHLGGIVSEGYERGFIEVRPAPYNVVLEEDNTYKGEIKIGFKFFIKEEIALME 208

Query: 176 ARELLADGKQQRKPICSEVMNLWRIVWLKLLCLIGHKNSSSERKQQ 222
           ARE +ADGK QR PICS+ MNLWRIVWLKL C IGHKNSSSERK Q
Sbjct: 209 ARESIADGKLQRNPICSKAMNLWRIVWLKLSCFIGHKNSSSERKTQ 254

[Close]
BLAST of Cla97C05G081930 vs. NCBI nr
Match: XP_031738550.1 (16 kDa phloem protein 2 isoform X2 [Cucumis sativus] >KAE8650251.1 hypothetical protein Csa_010189 [Cucumis sativus])

HSP 1 Score: 302.4 bits (773), Expect = 3.3e-78
Identity = 140/166 (84.34%), Postives = 153/166 (92.17%), Query Frame = 0 

Query: 56  SPAYYVMVECGNHERRTRVSSGKHEFACWNEKFSFELPTSDWKNITHIKFRIMETKLLNN 115
           SPAYYV VECGNHERRT+VSSGKHE ACWNEKFSFELPTSDW NITHIKFRIMETKLLNN
Sbjct: 24  SPAYYVTVECGNHERRTKVSSGKHEHACWNEKFSFELPTSDWNNITHIKFRIMETKLLNN 83

Query: 116 ETVGATVIHLGGIISEGYERGFIEVRPAPYNVVLEDDDTYKGEIKVGFKFFTKEEITLME 175
           E+VGATVIHLGGI+SEGYERG IEV PAPYNVVLE+D+TYKGEIK+GFKFFTKEEI L E
Sbjct: 84  ESVGATVIHLGGIVSEGYERGLIEVLPAPYNVVLEEDNTYKGEIKIGFKFFTKEEIALTE 143

Query: 176 ARELLADGKQQRKPICSEVMNLWRIVWLKLLCLIGHKNSSSERKQQ 222
           ARE +ADGK QR+PICS+++NLWRIVWLKL C I HKNSSS +K+Q
Sbjct: 144 ARESIADGKLQRQPICSKILNLWRIVWLKLSCFIDHKNSSSGQKKQ 189

[Close]
BLAST of Cla97C05G081930 vs. ExPASy Swiss-Prot
Match: Q9FJY9 (Pentatricopeptide repeat-containing protein At5g66500, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E38 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 2.9e-05
Identity = 29/79 (36.71%), Postives = 39/79 (49.37%), Query Frame = 0 

Query: 10  LFYQIPYKDVVLWSVMISACVKNGQYNEAFDIFREMQNQGGSTKPSSPAYYVMVECGNHE 69
           +F  IP K VV W+ MI A   NG   +A +IFREM  +G    P+S  + V++    H 
Sbjct: 338 IFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAH- 397

Query: 70  RRTRVSSGKHEFACWNEKF 89
               V  GK  F    EK+
Sbjct: 398 -AGLVKEGKECFGMMKEKY 414

[Close]
BLAST of Cla97C05G081930 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 7.2e-04
Identity = 19/37 (51.35%), Postives = 26/37 (70.27%), Query Frame = 0 

Query: 9   KLFYQIPYKDVVLWSVMISACVKNGQYNEAFDIFREM 46
           KLF +IP KDVV W+ MIS   + G Y EA ++F++M
Sbjct: 221 KLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDM 257

[Close]
BLAST of Cla97C05G081930 vs. ExPASy TrEMBL
Match: A0A5A7U647 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G001910 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.8e-82
Identity = 147/166 (88.55%), Postives = 155/166 (93.37%), Query Frame = 0 

Query: 56  SPAYYVMVECGNHERRTRVSSGKHEFACWNEKFSFELPTSDWKNITHIKFRIMETKLLNN 115
           SPAYYV VECGNHE RT+VSSGKHE ACWNEKFSFELPTSDWKNITHIKFRIMETKLLNN
Sbjct: 567 SPAYYVTVECGNHEHRTKVSSGKHELACWNEKFSFELPTSDWKNITHIKFRIMETKLLNN 626

Query: 116 ETVGATVIHLGGIISEGYERGFIEVRPAPYNVVLEDDDTYKGEIKVGFKFFTKEEITLME 175
           E+VGATVIHLGGI+SEGYERGFIEVRPAPYNVVLE+D+TYKGEIK+GFKFF KEEI LME
Sbjct: 627 ESVGATVIHLGGIVSEGYERGFIEVRPAPYNVVLEEDNTYKGEIKIGFKFFIKEEIALME 686

Query: 176 ARELLADGKQQRKPICSEVMNLWRIVWLKLLCLIGHKNSSSERKQQ 222
           ARE +ADGK QRKPICS+ MNLWRIVWLKL C IGHKNSSSERK Q
Sbjct: 687 ARESIADGKLQRKPICSKAMNLWRIVWLKLSCFIGHKNSSSERKTQ 732

[Close]
BLAST of Cla97C05G081930 vs. ExPASy TrEMBL
Match: A0A5A7U647 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G001910 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 3.4e-12
Identity = 37/49 (75.51%), Postives = 42/49 (85.71%), Query Frame = 0 

Query: 1   MRDIGIVWKLFYQIPYKDVVLWSVMISACVKNGQYNEAFDIFREMQNQG 50
           +RDI  VWKLF QIP KDVV WS +ISACVKNGQY+EAFD+ REMQ+QG
Sbjct: 108 IRDIETVWKLFNQIPCKDVVFWSAIISACVKNGQYSEAFDLLREMQDQG 156


HSP 2 Score: 315.5 bits (807), Expect = 1.8e-82
Identity = 147/166 (88.55%), Postives = 155/166 (93.37%), Query Frame = 0 

Query: 56  SPAYYVMVECGNHERRTRVSSGKHEFACWNEKFSFELPTSDWKNITHIKFRIMETKLLNN 115
           SPAYYV VECGNHE RT+VSSGKHE ACWNEKFSFELPTSDWKNITHIKFRIMETKLLNN
Sbjct: 659 SPAYYVTVECGNHEHRTKVSSGKHELACWNEKFSFELPTSDWKNITHIKFRIMETKLLNN 718

Query: 116 ETVGATVIHLGGIISEGYERGFIEVRPAPYNVVLEDDDTYKGEIKVGFKFFTKEEITLME 175
           E+VGATVIHLGGI+SEGYERGFIEVRPAPYNVVLE+D+TYKGEIK+GFKFF KEEI LME
Sbjct: 719 ESVGATVIHLGGIVSEGYERGFIEVRPAPYNVVLEEDNTYKGEIKIGFKFFIKEEIALME 778

Query: 176 ARELLADGKQQRKPICSEVMNLWRIVWLKLLCLIGHKNSSSERKQQ 222
           ARE +ADGK QRKPICS+ MNLWRIVWLKL C IGHKNSSSERK Q
Sbjct: 779 ARESIADGKLQRKPICSKAMNLWRIVWLKLSCFIGHKNSSSERKTQ 824

[Close]
BLAST of Cla97C05G081930 vs. ExPASy TrEMBL
Match: A0A1S4DSI8 (LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g56570 OS=Cucumis melo OX=3656 GN=LOC103484166 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 3.4e-12
Identity = 37/49 (75.51%), Postives = 42/49 (85.71%), Query Frame = 0 

Query: 1   MRDIGIVWKLFYQIPYKDVVLWSVMISACVKNGQYNEAFDIFREMQNQG 50
           +RDI  VWKLF QIP KDVV WS +ISACVKNGQY+EAFD+ REMQ+QG
Sbjct: 133 IRDIETVWKLFNQIPCKDVVFWSAIISACVKNGQYSEAFDLLREMQDQG 181


HSP 2 Score: 310.8 bits (795), Expect = 4.4e-81
Identity = 145/166 (87.35%), Postives = 153/166 (92.17%), Query Frame = 0 

Query: 56  SPAYYVMVECGNHERRTRVSSGKHEFACWNEKFSFELPTSDWKNITHIKFRIMETKLLNN 115
           SPAYYV VECGNHE RT+VSSGKHE ACWNEKFSFELPTS WKNITHIKFRIMETKLLNN
Sbjct: 89  SPAYYVTVECGNHEHRTKVSSGKHELACWNEKFSFELPTSGWKNITHIKFRIMETKLLNN 148

Query: 116 ETVGATVIHLGGIISEGYERGFIEVRPAPYNVVLEDDDTYKGEIKVGFKFFTKEEITLME 175
           E+VGATVIHLGGI+SEGYERGFIEVRPAPYNVVLE+D+TYKGEIK+GFKFF KEEI LME
Sbjct: 149 ESVGATVIHLGGIVSEGYERGFIEVRPAPYNVVLEEDNTYKGEIKIGFKFFIKEEIALME 208

Query: 176 ARELLADGKQQRKPICSEVMNLWRIVWLKLLCLIGHKNSSSERKQQ 222
           ARE +ADGK QR PICS+ MNLWRIVWLKL C IGHKNSSSERK Q
Sbjct: 209 ARESIADGKLQRNPICSKAMNLWRIVWLKLSCFIGHKNSSSERKTQ 254

[Close]
BLAST of Cla97C05G081930 vs. ExPASy TrEMBL
Match: A0A0A0L8X2 (C2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G122400 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.6e-78
Identity = 140/166 (84.34%), Postives = 153/166 (92.17%), Query Frame = 0 

Query: 56  SPAYYVMVECGNHERRTRVSSGKHEFACWNEKFSFELPTSDWKNITHIKFRIMETKLLNN 115
           SPAYYV VECGNHERRT+VSSGKHE ACWNEKFSFELPTSDW NITHIKFRIMETKLLNN
Sbjct: 22  SPAYYVTVECGNHERRTKVSSGKHEHACWNEKFSFELPTSDWNNITHIKFRIMETKLLNN 81

Query: 116 ETVGATVIHLGGIISEGYERGFIEVRPAPYNVVLEDDDTYKGEIKVGFKFFTKEEITLME 175
           E+VGATVIHLGGI+SEGYERG IEV PAPYNVVLE+D+TYKGEIK+GFKFFTKEEI L E
Sbjct: 82  ESVGATVIHLGGIVSEGYERGLIEVLPAPYNVVLEEDNTYKGEIKIGFKFFTKEEIALTE 141

Query: 176 ARELLADGKQQRKPICSEVMNLWRIVWLKLLCLIGHKNSSSERKQQ 222
           ARE +ADGK QR+PICS+++NLWRIVWLKL C I HKNSSS +K+Q
Sbjct: 142 ARESIADGKLQRQPICSKILNLWRIVWLKLSCFIDHKNSSSGQKKQ 187

[Close]
BLAST of Cla97C05G081930 vs. ExPASy TrEMBL
Match: A0A6J1ISM2 (uncharacterized protein LOC111479016 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111479016 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 5.8e-73
Identity = 135/166 (81.33%), Postives = 146/166 (87.95%), Query Frame = 0 

Query: 56  SPAYYVMVECGNHERRTRVSSGKHEFACWNEKFSFELPTSDWKNITHIKFRIMETKLLNN 115
           S AYYVMVECGN E RT+VSSGKHE  CWNEKFSFELP+SDWKNITHIKFRIME K L+N
Sbjct: 61  SRAYYVMVECGNQEHRTKVSSGKHEKVCWNEKFSFELPSSDWKNITHIKFRIMEIKFLSN 120

Query: 116 ETVGATVIHLGGIISEGYERGFIEVRPAPYNVVLEDDDTYKGEIKVGFKFFTKEEITLME 175
           E+VGA +IHLGGIISEGYERGFIEVRPAPYNVVLE+DDTYKGEIK+GFKFFTKEEI  ME
Sbjct: 121 ESVGAILIHLGGIISEGYERGFIEVRPAPYNVVLEEDDTYKGEIKIGFKFFTKEEIVQME 180

Query: 176 ARELLADGKQQRKPICSEVMNLWRIVWLKLLCLIGHKNSSSERKQQ 222
           ARE +AD KQ+RK I  +VMNLWR VWLKLLCL GHK  SS +KQQ
Sbjct: 181 AREFIADVKQERKLIYGKVMNLWRNVWLKLLCLFGHKTFSSGQKQQ 226

[Close]
BLAST of Cla97C05G081930 vs. TAIR 10
Match: AT4G00467.1 (Calcium-dependent lipid-binding (CaLB domain) family protein )

HSP 1 Score: 152.9 bits (385), Expect = 3.0e-37
Identity = 74/165 (44.85%), Postives = 111/165 (67.27%), Query Frame = 0 

Query: 56  SPAYYVMVECGNHERRTRVSSGKHEFACWNEKFSFELPTSDWKNITHIKFRIMETKLLNN 115
           +P YYV+++CG  E R+++S G ++ A WN+KF F+ P S WK +T+IK RI++ +L N+
Sbjct: 24  TPVYYVLLQCGTKEYRSKMSKGDNDNALWNQKFVFDFPMSQWKKLTYIKLRILDKELFND 83

Query: 116 -ETVGATVIHLGGIISEGYERGFIEVRPAPYNVVLEDDDTYKGEIKVGFKFFTKEEITLM 175
              VG T+IHLGGII+EG +RG+IE++PAPYNVVLE DDT+KGE+KVG +F   +++   
Sbjct: 84  GGFVGETIIHLGGIITEGRDRGYIEIKPAPYNVVLE-DDTFKGELKVGLRFIATDKLQ-R 143

Query: 176 EARELLADGKQQRKPICSEVMNLWRI-------VWLKLLCLIGHK 213
           +A EL  + K   + + S + NL ++        W +  CLI  K
Sbjct: 144 KAWELKMEAKNSEELMISPIQNLMKLPLLRFIAAWARRQCLINAK 186

[Close]
BLAST of Cla97C05G081930 vs. TAIR 10
Match: AT5G66500.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 50.4 bits (119), Expect = 2.1e-06
Identity = 29/79 (36.71%), Postives = 39/79 (49.37%), Query Frame = 0 

Query: 10  LFYQIPYKDVVLWSVMISACVKNGQYNEAFDIFREMQNQGGSTKPSSPAYYVMVECGNHE 69
           +F  IP K VV W+ MI A   NG   +A +IFREM  +G    P+S  + V++    H 
Sbjct: 338 IFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAH- 397

Query: 70  RRTRVSSGKHEFACWNEKF 89
               V  GK  F    EK+
Sbjct: 398 -AGLVKEGKECFGMMKEKY 414

[Close]
BLAST of Cla97C05G081930 vs. TAIR 10
Match: AT3G55470.2 (Calcium-dependent lipid-binding (CaLB domain) family protein )

HSP 1 Score: 47.8 bits (112), Expect = 1.4e-05
Identity = 28/110 (25.45%), Postives = 55/110 (50.00%), Query Frame = 0 

Query: 60  YVMVECGNHERRTRVSSGKHEFACWNEKFSF--ELPTS--DWKNITHIKFRIMETKLLNN 119
           YV ++     R++ V+        WN+K  +  E P S  D+K I  +   +      ++
Sbjct: 28  YVEIQYKGQTRKSSVAKDGGRNPTWNDKLKWRAEFPGSGADYKLIVKV---MDHDTFSSD 87

Query: 120 ETVGATVIHLGGIISEGYERGFIEVRPAPYNVVLEDDDTYKGEIKVGFKF 166
           + +G   +H+  ++  G E+G  E+RP  YN+V + D ++ GE+ +G  +
Sbjct: 88  DFIGEATVHVKELLEMGVEKGTAELRPTKYNIV-DSDLSFVGELLIGVSY 133

[Close]
BLAST of Cla97C05G081930 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 45.8 bits (107), Expect = 5.1e-05
Identity = 19/37 (51.35%), Postives = 26/37 (70.27%), Query Frame = 0 

Query: 9   KLFYQIPYKDVVLWSVMISACVKNGQYNEAFDIFREM 46
           KLF +IP KDVV W+ MIS   + G Y EA ++F++M
Sbjct: 221 KLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDM 257

[Close]
BLAST of Cla97C05G081930 vs. TAIR 10
Match: AT1G74630.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 45.1 bits (105), Expect = 8.8e-05
Identity = 19/43 (44.19%), Postives = 28/43 (65.12%), Query Frame = 0 

Query: 9   KLFYQIPYKDVVLWSVMISACVKNGQYNEAFDIFREMQNQGGS 52
           ++F ++P++D V WS MI     NG +NE+F  FRE+Q  G S
Sbjct: 224 RIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMS 266

The following BLAST results are available for this feature:
BLAST of Cla97C05G081930 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016898949.13.7e-8288.55PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing pro... [more]
XP_016898949.16.9e-1275.51PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing pro... [more]
KAA0048969.16.9e-1275.51putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa][more]
XP_038885271.11.0e-1895.92LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At3g01... [more]
XP_031738550.13.3e-7884.3416 kDa phloem protein 2 isoform X2 [Cucumis sativus] >KAE8650251.1 hypothetical ... [more]
BLAST of Cla97C05G081930 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FJY92.9e-0536.71Pentatricopeptide repeat-containing protein At5g66500, mitochondrial OS=Arabidop... [more]
Q9LN017.2e-0451.35Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
BLAST of Cla97C05G081930 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7U6471.8e-8288.55Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa... [more]
A0A5A7U6473.4e-1275.51Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa... [more]
A0A1S4DSI83.4e-1275.51LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g56... [more]
A0A0A0L8X21.6e-7884.34C2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G122400 PE=4 SV=... [more]
A0A6J1ISM25.8e-7381.33uncharacterized protein LOC111479016 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... [more]
BLAST of Cla97C05G081930 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G00467.13.0e-3744.85Calcium-dependent lipid-binding (CaLB domain) family protein [more]
AT5G66500.12.1e-0636.71Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G55470.21.4e-0525.45Calcium-dependent lipid-binding (CaLB domain) family protein [more]
AT1G08070.15.1e-0551.35Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G74630.18.8e-0544.19Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 17..63
e-value: 2.6E-9
score: 37.2
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 20..49
e-value: 8.5E-9
score: 33.1
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 18..52
score: 11.871145
IPR000008C2 domainPFAMPF00168C2coord: 54..131
e-value: 5.4E-8
score: 33.1
IPR035892C2 domain superfamilyGENE3D2.60.40.150C2 domaincoord: 32..167
e-value: 1.2E-11
score: 47.1
IPR035892C2 domain superfamilySUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 55..174
NoneNo IPR availablePANTHERPTHR46502:SF14CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEINcoord: 56..219
NoneNo IPR availablePANTHERPTHR46502C2 DOMAIN-CONTAININGcoord: 56..219
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..29
score: 5.0

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C05G081930.2Cla97C05G081930.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003729 mRNA binding