Cla97C05G081870 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C05G081870
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	RNA polymerase I-specific transcription initiation factor RRN3
Location	Cla97Chr05: 1448478 .. 1457544 (+)
RNA-Seq Expression	Cla97C05G081870
Synteny	Cla97C05G081870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTATAGCATGTTTCAACTTTCTTCATTCCCATTCGCCGTCGGCTGCTACTCTCTCTCTCAGTCCTCGTTCGTCATCGGTCTTTCTTCACCGCCGTTCGCGCCGTCGTCGTTCGACGGTCGCATTCCACATCGGTCTCTCTTCTCTGCCGTTCGACGTTGGAGCTGGTTTCGTTGGATCTCAATCTAACCCACTTGTTTCAGGTTCGTCTTCTTCATTCTCTGAGCTATCGAACTATTTTTGTGGCTATTTTGCCTTTTGTGATTGTGGATTCTGGGTTCTTAGCGTGTGTCTGCGTGCGTGCGCGCGTGTGTGGCTATTTCGGTTTTCGCGATCGTCGGAGCTGGTCGAACAAGAATTAGAGTAAAGGGCTTTTGTTAAGCGTTTAACATTTTTGTTAAAATATTCAATTTCGTCGATATTTTTATGTTTTCAAAGTTCCCAAATTCATTCAATTCGAGGATTATTTTATCATCATTATTACTTATGGTAGAGTACTCTGTAGCTCCTTGGTGTAAAATGTATTTGAGATATAACGCGTCCCTAAGGCGTCGTATCCTAATTTTTTTGGGAATTCTCGCGTCAGTGTTTGTGCTTCTTGGGCAAGAATGTACCGGACACTTAAAGTCTATCGACGTTGCAATGGGACTAGTGATGTGTCTGCATTAGTTCATGCATGTTTTAAAACTTTTTTCATGTTTTTATTTAAGTTCTAGAACTAGCAGTTTTGCTCGCATTTTGATAATTCTCCCTTTTAAATGTTTCTTCGATATCTAATTGAACAGTTACTTCAGTTTGACCAAATGGTTTCAATGGTGTTCCCAATATTTACTCATGTTTTGCTAAACCAACCTTTTATTTCCTGTTGGTTTTGGGTTTTACTTATCATGCATGAAGTAATGAACCCGTTTCTTTACCTTTTTTTTTTTTTCTTTTTTCCTAATTATTTTGTTTGAATCTTTTGTTGTGTTCTTATGTTTCAGGTTTGAACCTCGTCCTGCCCAGGCCTCACTGTGGCTATAGGATCTCAATAGAGTTTGGGCATTAATTATGGGGGTGGAATTGGAAAATGGTCAAGCTCAGTTGCACGATATGGAGGATGTTAATCTCACAGATGCCCAGTTAATTGATTTCGTTAGGGGGTTTCTTAGTTCAGTGTCGCTGGTATTGTTCTCATTACATCATTATTGGTCTTTACTTAATAAAGAGAACATATAGCATTTGAATTTTGAATTGCACTCTGTTAGTTTATTATTTGGGTTGGATATGCTTCCAAGTTCTAATCAAGTTGTTTTTTGAGGAATAACTGTAGTAACCTTACAAAAGCTCTTCCATCGGTGTAGGGAGATAATGATGGTTATAACCAGCTTGTTGGTGTTATACACCACAGGGATCGACTATCCCCTGATGACGTTGCCTTGCTCGTGGTATGTCCTTTACATCACGTCTGTTTTTGGCCAATGATACGAGATATAATTTCATACTAAATACTATCCAATTTTTTACTCACTTGGTGTGCTTAACAGACATGTTTGAAGGCACTATCTGGAGCAGTTTCTTGTATAGATATCGTTCTCCACGAATCTCTTCTTGCAGCAGTAAGTTTATCACTAAACTCTGAGTCATTATCCCGCAATTTTGTTGTTGTAATGGTAGCTCTTTCTCAGATTTTTAAAATGAGCTTGTGGGATTATGGACCTAACGTGATGGATGCCCTGATTGAACTAATAATATCCCTGGTATGAGCATTTATGATAATAGAACTCTCACACGCTTTCTCAAGGTTCACCTAATAGTTCCAAGATCTTCTGACTTTTTGTGTATTCAATGTTTCAGGCTGTTTCAAGTGGAAAATATGTGGATGCGTGCTTGGATATGCTTGTAAATAATTTCATGCCACCCTATTCCTACAAGGATTTCCTGAAGAAACCACATGGCCTTAATAGAAAGGATGAAGTTCTTTCTCGAGTGCACACAGCTCTAAAAGACATCTCAGACTTGGTGCCTCTTGCACCCTTGAGATTAGAGCAGATAGTTGTCCATAAAATGCAGAGAGTCTTTTTCAAAGAATCCGTGAGTTGAATTTTCATGGGCTAAAAGTTTCTGAAGAGAAATCTAAGTGAAAATTATGTTTATTTCTTGACTATTATTGTTATTTTCATCTAAAAAAATATTTATAATTTTGGCTTTTTATTTTTCTACCATCCTTCTCTTTTTCATGACCATCTATTCAATGACTATTGGAAGTTTGGAGTGAAGCTGAAAGCCCATTAGTTGTTTGCATGCTTTGGCACACTGAAGTGTTAGATGGCAAGATTTATATCATTGAAATACCGTACCAGATATAGTTCAAACTAGAACAATGCTTGATTATGATTTATAAATTAAAATGCAGTGTATATTCACTAGATGCTACATTCGTACAATCCTTGAACCTACAAACTCCTCTTAAAGTTTGTAAATAAATGTATTCATACGATCCAGATCGCTAGGTCATTTAAAATTTTAAAAAGTCAGGTAGAAATGTACCATAAAGATGGTTACATTTTCAAAAGGCCTGACCTTGAAACATTTTACAGATGCTTCTTGCTTGCTTAGAAGAGAGATTTCTTTGATTTCTTTTTTAAATCTTTTTAAAAACTCATTGTCCATTTCACCTTCAAAACATTTGCACTCTTTGTTAGGAATTTGTTTTTGATTATGTCCTCCACTTATATCTGTTTAACCTCTCTGTAGTTGACCACGATATATGTTGAAAACATGTTGAGGTTGGAAAAGGGTGCAATGAGTGAATTTGTTGGGAGAAAGATATTAACTGCGTTGGTGGATAAGCTTTTAGATTTGGATGTAAGTCAAAACAAATATTTTACAGCACTCACGTTTGTTTTTGTGATTACTTTATCATTGATATTAACGAGTTTTAACCTTCTGGTAGGTGGAGATTGGGTGGGATGATATCCTACAAGACGATTTCAGTAAAGGAATTTTTGAGATGGAACTTGAAGATGATGATGAAACCACAGACGATATTAATGAGGATTCTAGTGAGGTATGCTATTCATTATCTAGGCTGGATTAAGAAGAATATTTCATCAACTAAGTTGTAATGGTATTTAATATCTTTCTTAGCTTTTCTTCGTTTTGTTTTGGAAAATTATGGTTGGTAATCAATGTTTTAAAAAGCTATTGAGGCTTATGCCTTGAGGCTCCCCTTAGGCATGACTCACTTTTAGCCTCAAGATTTACGCATTTGTTGAACTAGAAGAGGCTTACCCCTTGGTGAAAACACATTGAGATTTAAAATTTCTACTACTCGTGTAATAATTAGAAGAATAATATTGATTTGTGTCATTCTTTAAAAAAATAGAAGTTTGAGATGTGACAATTTGGACTATTATTGCTTTTAGTATTGCGACTTTAAAAACATTGAAAGCAATAAATTATAGTATAAACCAATCCTATTAATGATAATAGTAGGGATGTTAGAAATATCCTTTTAAATATTTTTGTTTAAGGATGGGGTGAACTTTTTATACTTTTATATGACTGTTATGTTTAACAATACTTGGTCATCCTAATTTTAGATTTATAAAATGTTTTTAATTAAATTTGAGACTTACACCTTGCCTCTTCAAAGAGGAAAAGCCTCAAGACTAACTTTAGTCTTTTAAAGCAAATTGGCATTTGATTTATACGCCTTTATGTTTTAGATTCTAGTCTTCTAGTTTATGAAGTAATGGATCTGAAGTATATTCCTTGGCTTGAACCTAATTGTCTTTTGGGTCTACAAAGTTTATACTCTATCTGAGTCAGGCTTTTAAAATAATATGCAACATTTATTGAAAAATTACGTACATTTTGACTTTTCTACCATACATCTCGATACTTCTTTTAATTCGTGCCATTATTTGCTTGGCCGAATTTAAGTTTATTTTGCTAGCTTCCAAGAGAACTATTATTTTAAACTCAGCCAAGAAAATAACGGCATGAAAAGTTACTTACATTTTGACTTTTCTGCCATACATTTTGATACTTCTTTTAATTCATGCTGTTATTTGCTTGGCTGAATTTAAGTTTATTTTGCTAGCTTCCAAGAGAACTAAGTCGGAAGAGCTTAGGTGGAAATGTAATTGCTGAAACGTTAGATAGCTTGATTGTTCTAACATTTGAACATCTTGAATCATGTGAACGTGATGGACGATTGAATGAGGTACATTGTGTAGTTTATATGACTTTCCTTTTTTGTTCCCAATATCTTTGTTTTATTCTGCAAATGAGAATTTTTTCCATGTTTCTTTAATGTGGAGGTTAGGTTTTTGACATTTTACTCCTTTCATTCCAAAGAACTGTTCTGACTGCTTACAAGTCTAAATTCGCCCAGGTAATTAACATGCACCATAATTCTCAATGTTTTTGCTTATTTACTCTGGCTTAGTGGGCTCTCCTTTAGATCATTTTTCTTGTTTATGGAGACTGAATGACTTGCTTTAAATGCTTTTCTTGGCAGTTTGTCATATTCTATGCTTGTGCATTGGACGCTGATGTTTGTGGCGAGAGATTTGCCGTTTCGCTGGCAGATATGTTTGTTTCCTGCAATGATCCTCCGCTTACCAGGTAATAGCAATTCATTAGAAAGCTCTCTCTCTCTCTCTGGTAAGAGACAAATTTCGTTATCTAATTTTGCCTTTGAAAGCTATGTTTCACTAGCGTGGCATTTCTTGCCCATTTAGTATCCATTTAAATTGAATCTCATTTGCAAGGCCTTACTCATCTAAGAAATCTACAACTAACTAGTGTATGGTCGAGTTCCTCTCACTCTCTCCCTCTCTCTTTTAGTATTATTATTTTATTTCAACGTTTTAAGGTTTGTGGTTTTTTTTACATATATATATATATACTAAGACAAAAAAGAAACCCCTCTTTAAATAGAAAAATTTGCACCTGCACGTATCAAATTTGTTCTACCTTAGAGGGTTAAATGTTCTTGATTTGAGATGGGAAGAAAGCAAGTAGTTACCTAGGAATTCTATCAGATTTATGTCAATAGCTTAGTAGCCTTGTACATGAGATACAGTTGTACAACATCACACTGTCTCACACACTAGTGTTCCCCAGTTTGAACCTGGGCTCAAACACATGTTTTCATTTTTTTTTTTAAATATAAAAATGAAATGAAATTATATATATATAAATAAGGGGTTTTTTTAAATATAGCAAAATGAGTCAAAATATTTTCAAATATAGTAAAATATCATTATTGTCTACCAGTGATTATTGATAAACTACCATCATCTATCATTTATGATAGACACTAACATTTTGCAATATTTGAAAATATTTTCAACAGTTTTGACATTTAAAACAATTACTCATATATAAATTATAATTTTAAAATTTTAAAAACATAAAAATGAAATTGAATAATATATGTTTGCGGTATTGTGCAGGATGAGTGCCGTTTCATATCTTGCGAGTTATTTGTCTCGTGGGAAGTTTTTGTCAACCTCTTTGGTTACTACTATATTGAAAAGGTTAACCTGTCAACTTTAACTATGTTTCTCTGATGAAAAATATGAAACTGATAAAGTTAAAGTGGGGAGGGTAAATTTGTGGCTCAAAGCCTAATTTTGCTTCTCCATTTTTTTTTTTTTTCCAGACTGGTGGATTGGTGTTTAGAATATGGCAAAACAGTGGATGCTGACCCGAACCCAAAGGCTCATAAAGTATTTTATTCTGGTTGCCAGGTATACAATACTTCAACTCCTTTTTGCTAGACCAAGGCACGTGGGATTGTTGAAAAACGGGAAAAATAATGATTATGTTTCTGGAAGTGTTGTTATTTGTACTTTTCAGTTATGATTATGATTACTTAGATATTTTTGAGGAAACAGATTTTACTGATATTAATAAAATTCACAAGCCCTTCATGGAATTATTTGAAGACAATCCAATTGGAAGATTTTAAAGAGTGTGAATAGTCATAAAACCACTTTGGGAGGACAAACTTCACAAGGAAGTGTAAAAAGGAATAGTCATAATGCTTGACAGTCTCCAACACCATGACCATGGTCTCCTTGAAACTCCTTTATCTCTTTATAATCAAGTGTTTCAAAAAATGGCTGTAAATGCTTTAGACCAGATATTCTTTTCCTTTTTCTTTCCCAACTATGCACCACATAAGGGAGAGTGTATAAATCTTGACGAAGCCATTTTTTGTTTTTTCCCCCACCACGTCACTAACCATTTAAGCGAAAGTATTTGGCTTATGGTTTTGATTTGTGTGACTTGAGGATAATAATATTTGGTGAAGGGCTTGCTTATCCTAGATTATGTGTTTTGCTAGTTTCACAGGTATGGATTCTCCGTTTATACTGCATTTTTTAAAAGGAGAGTCACTACTTTCATAGAGCACATGGAAGAATATACAAATGGGCACTACCAAAAATGGAAAAAACTCATCTGATATGAAAAGACAAGCCATCACAATAGGAGCCAAACCAAAAATAACATAGGTTGAAGCCAAAAATGATAGTAAGCATTAAGTAAAAGGCTTCGATTATTGTGGAAAATAGACGAGGATATAAATGAATTCTTTGGTTCTTACGAGCATCCCCTTATTCTATTTCTTGATTTTCTCTTGCCCTACTCGTGTACTACATTGGAGAGTGTTGGTTACTAATTTCTTTTGGAAAGGTAACAAGGAGCTTGGTGTTGTCAATCATTAAAAAAGTCTTCACTTATGAGGAATGGTACTGAGTTACAGTGGGTTGTGGAGATAAAACTTGGTTCTGGAAGGACAAATGGTTGGTTGGCTTGCCCCTTTGTTTGGAATTTTCTACGCTTTTCAGACTTGTGATTGCCAAGGATTCTTTGGTTTGTCGGTGTTAGTCTAATTCTCCTTATGCGTGGGATTTGAAGTTTAGAAGAAATTTCATTGACGCCGCATTGGGTTACTCTTTTAAACAAGCTTCAACCTTTTAGATTGAAGATCCTTGGTTAAATGCTTAGGTGAAAATCCTTTGGTCCAATGACATCTTTGCCCTTCTTTGTAGGCTGTGGTTTGAAAGAAACTCCAGAATTGTTTTTGAATTAACAATGTTTTTTTTGGAATTTGGTTACTCTCTCCGCGTCTACATGGTCCTCTACTTCTAAATTCTAATTCTTTTGTAATTATAACCTAATCCAAATCTATACTATTTGGGTTTTTTTTCTTTCTTTTTTTGCAAGTTATTGTTATGTGGGGATATCCCATCTTCCCCTCTTTTTTGATCTTTCTCTTTGATAATGAAAATTATGTTTCTTATATATTAGAAAAAACTTCTTTATCATAGTCATTTTGTTGGGCTGCTTTTGAATGTAAATCCTTTTCATTTTTATTTTTACATTGATTAAAAGCCTGTTATTATTTTCTTTAAAAAAATCCATTTGGGAGAAATGGGATAGTATTTTTGTTGATACTTTCCCACTCCAACCCCACTAACACAAAAAAAGAATTTAACCTATTAGATTATTCTTAATTCTCCCCCACGTATATCCATGAAAAAGCAAGGAGTTAACTGGCCCCCTAAAATGGTTTTTTATTTTTTGTTTTATTTTTTATCATTTTAAATTCTCCCTCGTTGAACCTTAAAGAAATGAAACTGCAATTTGAAATATTGATTCGATTCTATGCTAACACTTTGAATTGCTTCTTGGACGATGAATTTCATGGATGTTTTGGTCAATTAGAAACTCTGGCATACGAGCAGTTTGTGTACAAGATTTACATTTTTTTTAATGATTTATTTTCCACAGGCTATAATGTATGTCCTTTGCTTCCGGATGAGGTCCATTTTGGAGATTCCACGTCTGAAGTCACAAGTTCTGCTTATGCCTATAGGTCCAGTCTTGACGCATAGATTAAGCCCACTGAAGGTGGGTAATTGGTTGACCCCTTGATATTTGGTGGTTTTTGTTCTGTGCAATTTTCTTATATGAATTTTATTTTAACGCCTTTTTGTTTAACAGGTTTGCCTACCATCTATTGTTGAGGAATTTCTTCGGCAGGCGAAAGTTGCCAATTTATTTACGCCATCAGAGACTTTTATATTTAATGGTTTGCTGGAGTCTGAATATTCAAAAACTTATGGTGGGATAGAAAGGCTCGACATGTTTTTTCCGTTTGATCCTTGCTTATTGAAAACATGTGACAGGTATATACGCTTAGTCTTGCTATTTCCTTCTTAAGATAACAAAGGGTAGGTAGATAAAACCATTATAAATATTGATACACGCAGAAGAATTATAAAATCTTCTGCCTGCTTATTGTGGATATGCTTTATACTCAAAATGATTGATTGTAATGAGTGAGAACGCTTGAGAACTTGAAGGTGTAAGGACTTTTTGTTTGATTTTTTTTTTTTTTTTCGAATTATCAACTCATGCTTTGTTATTACCCTTTGTTTATGAAGATATCTACGGCCACATTTTGTTTATTGGTCGATGGTCAGACCTACCTATGATGAAGAAGAAAATGGAGGTAGCAGCGATGAAGATGTTGCAGAGGTTTTTCCAGATAGAATCGAGGAAAACCTTATGGACGATGAAGCAATGGCAGGAAGCTACGACTACAGAGATTTTGATCTTGATGAATTTGATTCTGCATTAAACAAAATGTCCATCACACCAAGAAATTCTCTTCAGTACCAGCGAGATTTTGTTCAAATGCCCTCGCGAATCCGACCCTCGATGAGTCCAGAATCTTTGTGATATCTTTTCTCAGTTTGAATAGATAACTGGAATGCAAGTGAGAATGGCTGGGCTGGCATATTTCCATGAAGATTGTGATTGCAAATCTAGGCTGAGTTTTTGGGGTTTGTCTTGTTTATTTAAAATGTATAATAAATGGGTTGGGTTGGAATTGGTGGTGTTGGGCTTCAGTTTTGGTTTCTCGTTCCTTTTTCTAGCTTTGCAGTGCTTTGATTATTGGCCTTGCTATTCTTAACGCTCTAGGCTTGTAATAGTTGCAGTAAGTAATCAAATACAGCCAAAATTTTGTACACTTCTGAATGATATATATGTATGAGTAA

mRNA sequence

GCTATAGCATGTTTCAACTTTCTTCATTCCCATTCGCCGTCGGCTGCTACTCTCTCTCTCAGTCCTCGTTCGTCATCGGTCTTTCTTCACCGCCGTTCGCGCCGTCGTCGTTCGACGGTCGCATTCCACATCGGTCTCTCTTCTCTGCCGTTCGACGTTGGAGCTGGTTTCGTTGGATCTCAATCTAACCCACTTGTTTCAGGTTTGAACCTCGTCCTGCCCAGGCCTCACTGTGGCTATAGGATCTCAATAGAGTTTGGGCATTAATTATGGGGGTGGAATTGGAAAATGGTCAAGCTCAGTTGCACGATATGGAGGATGTTAATCTCACAGATGCCCAGTTAATTGATTTCGTTAGGGGGTTTCTTAGTTCAGTGTCGCTGGGAGATAATGATGGTTATAACCAGCTTGTTGGTGTTATACACCACAGGGATCGACTATCCCCTGATGACGTTGCCTTGCTCGTGACATGTTTGAAGGCACTATCTGGAGCAGTTTCTTGTATAGATATCGTTCTCCACGAATCTCTTCTTGCAGCAGTAAGTTTATCACTAAACTCTGAGTCATTATCCCGCAATTTTGTTGTTGTAATGGTAGCTCTTTCTCAGATTTTTAAAATGAGCTTGTGGGATTATGGACCTAACGTGATGGATGCCCTGATTGAACTAATAATATCCCTGGCTGTTTCAAGTGGAAAATATGTGGATGCGTGCTTGGATATGCTTGTAAATAATTTCATGCCACCCTATTCCTACAAGGATTTCCTGAAGAAACCACATGGCCTTAATAGAAAGGATGAAGTTCTTTCTCGAGTGCACACAGCTCTAAAAGACATCTCAGACTTGGTGCCTCTTGCACCCTTGAGATTAGAGCAGATAGTTGTCCATAAAATGCAGAGAGTCTTTTTCAAAGAATCCTTGACCACGATATATGTTGAAAACATGTTGAGGTTGGAAAAGGGTGCAATGAGTGAATTTGTTGGGAGAAAGATATTAACTGCGTTGGTGGATAAGCTTTTAGATTTGGATGTGGAGATTGGGTGGGATGATATCCTACAAGACGATTTCAGTAAAGGAATTTTTGAGATGGAACTTGAAGATGATGATGAAACCACAGACGATATTAATGAGGATTCTAGTGAGCTTCCAAGAGAACTAAGTCGGAAGAGCTTAGGTGGAAATGTAATTGCTGAAACGTTAGATAGCTTGATTGTTCTAACATTTGAACATCTTGAATCATGTGAACGTGATGGACGATTGAATGAGGTACATTGTGTTTTTGACATTTTACTCCTTTCATTCCAAAGAACTGTTCTGACTGCTTACAAGTCTAAATTCGCCCAGTTTGTCATATTCTATGCTTGTGCATTGGACGCTGATGTTTGTGGCGAGAGATTTGCCGTTTCGCTGGCAGATATGTTTGTTTCCTGCAATGATCCTCCGCTTACCAGCGTGGCATTTCTTGCCCATTTAAAAAATTTGCACCTGCACGTATCAAATTTGTTCTACCTTAGAGGGTTAAATGTTCTTGATTTGAGATGGGAAGAAAGCAAGATGAGTGCCGTTTCATATCTTGCGAGTTATTTGTCTCGTGGGAAGTTTTTGTCAACCTCTTTGGTTACTACTATATTGAAAAGACTGGTGGATTGGTGTTTAGAATATGGCAAAACAGTGGATGCTGACCCGAACCCAAAGGCTCATAAAGTATTTTATTCTGGTTGCCAGCGAAAGTATTTGGCTTATGGTTTTGATTTGTGTGACTTGAGGATAATAATATTTGGTGAAGGGCTTGCTTATCCTAGATTATGTGTTTTGCTAGTTTCACAGAAACTCTGGCATACGAGCAGTTTGTGTACAAGATTTACATTTTTTTTAATGATTTATTTTCCACAGGCTATAATGTATGTCCTTTGCTTCCGGATGAGGTCCATTTTGGAGATTCCACGTCTGAAGTCACAAGTTCTGCTTATGCCTATAGGTCCAGTCTTGACGCATAGATTAAGCCCACTGAAGGTTTGCCTACCATCTATTGTTGAGGAATTTCTTCGGCAGGCGAAAGTTGCCAATTTATTTACGCCATCAGAGACTTTTATATTTAATGGTTTGCTGGAGTCTGAATATTCAAAAACTTATGGTGGGATAGAAAGGCTCGACATGTTTTTTCCGTTTGATCCTTGCTTATTGAAAACATGTGACAGATATCTACGGCCACATTTTGTTTATTGGTCGATGGTCAGACCTACCTATGATGAAGAAGAAAATGGAGGTAGCAGCGATGAAGATGTTGCAGAGGTTTTTCCAGATAGAATCGAGGAAAACCTTATGGACGATGAAGCAATGGCAGGAAGCTACGACTACAGAGATTTTGATCTTGATGAATTTGATTCTGCATTAAACAAAATGTCCATCACACCAAGAAATTCTCTTCAGTACCAGCGAGATTTTGTTCAAATGCCCTCGCGAATCCGACCCTCGATGAGTCCAGAATCTTTGTGATATCTTTTCTCAGTTTGAATAGATAACTGGAATGCAAGTGAGAATGGCTGGGCTGGCATATTTCCATGAAGATTGTGATTGCAAATCTAGGCTGAGTTTTTGGGGTTTGTCTTGTTTATTTAAAATGTATAATAAATGGGTTGGGTTGGAATTGGTGGTGTTGGGCTTCAGTTTTGGTTTCTCGTTCCTTTTTCTAGCTTTGCAGTGCTTTGATTATTGGCCTTGCTATTCTTAACGCTCTAGGCTTGTAATAGTTGCAGTAAGTAATCAAATACAGCCAAAATTTTGTACACTTCTGAATGATATATATGTATGAGTAA

Coding sequence (CDS)

ATGGGGGTGGAATTGGAAAATGGTCAAGCTCAGTTGCACGATATGGAGGATGTTAATCTCACAGATGCCCAGTTAATTGATTTCGTTAGGGGGTTTCTTAGTTCAGTGTCGCTGGGAGATAATGATGGTTATAACCAGCTTGTTGGTGTTATACACCACAGGGATCGACTATCCCCTGATGACGTTGCCTTGCTCGTGACATGTTTGAAGGCACTATCTGGAGCAGTTTCTTGTATAGATATCGTTCTCCACGAATCTCTTCTTGCAGCAGTAAGTTTATCACTAAACTCTGAGTCATTATCCCGCAATTTTGTTGTTGTAATGGTAGCTCTTTCTCAGATTTTTAAAATGAGCTTGTGGGATTATGGACCTAACGTGATGGATGCCCTGATTGAACTAATAATATCCCTGGCTGTTTCAAGTGGAAAATATGTGGATGCGTGCTTGGATATGCTTGTAAATAATTTCATGCCACCCTATTCCTACAAGGATTTCCTGAAGAAACCACATGGCCTTAATAGAAAGGATGAAGTTCTTTCTCGAGTGCACACAGCTCTAAAAGACATCTCAGACTTGGTGCCTCTTGCACCCTTGAGATTAGAGCAGATAGTTGTCCATAAAATGCAGAGAGTCTTTTTCAAAGAATCCTTGACCACGATATATGTTGAAAACATGTTGAGGTTGGAAAAGGGTGCAATGAGTGAATTTGTTGGGAGAAAGATATTAACTGCGTTGGTGGATAAGCTTTTAGATTTGGATGTGGAGATTGGGTGGGATGATATCCTACAAGACGATTTCAGTAAAGGAATTTTTGAGATGGAACTTGAAGATGATGATGAAACCACAGACGATATTAATGAGGATTCTAGTGAGCTTCCAAGAGAACTAAGTCGGAAGAGCTTAGGTGGAAATGTAATTGCTGAAACGTTAGATAGCTTGATTGTTCTAACATTTGAACATCTTGAATCATGTGAACGTGATGGACGATTGAATGAGGTACATTGTGTTTTTGACATTTTACTCCTTTCATTCCAAAGAACTGTTCTGACTGCTTACAAGTCTAAATTCGCCCAGTTTGTCATATTCTATGCTTGTGCATTGGACGCTGATGTTTGTGGCGAGAGATTTGCCGTTTCGCTGGCAGATATGTTTGTTTCCTGCAATGATCCTCCGCTTACCAGCGTGGCATTTCTTGCCCATTTAAAAAATTTGCACCTGCACGTATCAAATTTGTTCTACCTTAGAGGGTTAAATGTTCTTGATTTGAGATGGGAAGAAAGCAAGATGAGTGCCGTTTCATATCTTGCGAGTTATTTGTCTCGTGGGAAGTTTTTGTCAACCTCTTTGGTTACTACTATATTGAAAAGACTGGTGGATTGGTGTTTAGAATATGGCAAAACAGTGGATGCTGACCCGAACCCAAAGGCTCATAAAGTATTTTATTCTGGTTGCCAGCGAAAGTATTTGGCTTATGGTTTTGATTTGTGTGACTTGAGGATAATAATATTTGGTGAAGGGCTTGCTTATCCTAGATTATGTGTTTTGCTAGTTTCACAGAAACTCTGGCATACGAGCAGTTTGTGTACAAGATTTACATTTTTTTTAATGATTTATTTTCCACAGGCTATAATGTATGTCCTTTGCTTCCGGATGAGGTCCATTTTGGAGATTCCACGTCTGAAGTCACAAGTTCTGCTTATGCCTATAGGTCCAGTCTTGACGCATAGATTAAGCCCACTGAAGGTTTGCCTACCATCTATTGTTGAGGAATTTCTTCGGCAGGCGAAAGTTGCCAATTTATTTACGCCATCAGAGACTTTTATATTTAATGGTTTGCTGGAGTCTGAATATTCAAAAACTTATGGTGGGATAGAAAGGCTCGACATGTTTTTTCCGTTTGATCCTTGCTTATTGAAAACATGTGACAGATATCTACGGCCACATTTTGTTTATTGGTCGATGGTCAGACCTACCTATGATGAAGAAGAAAATGGAGGTAGCAGCGATGAAGATGTTGCAGAGGTTTTTCCAGATAGAATCGAGGAAAACCTTATGGACGATGAAGCAATGGCAGGAAGCTACGACTACAGAGATTTTGATCTTGATGAATTTGATTCTGCATTAAACAAAATGTCCATCACACCAAGAAATTCTCTTCAGTACCAGCGAGATTTTGTTCAAATGCCCTCGCGAATCCGACCCTCGATGAGTCCAGAATCTTTGTGA

Protein sequence

MGVELENGQAQLHDMEDVNLTDAQLIDFVRGFLSSVSLGDNDGYNQLVGVIHHRDRLSPDDVALLVTCLKALSGAVSCIDIVLHESLLAAVSLSLNSESLSRNFVVVMVALSQIFKMSLWDYGPNVMDALIELIISLAVSSGKYVDACLDMLVNNFMPPYSYKDFLKKPHGLNRKDEVLSRVHTALKDISDLVPLAPLRLEQIVVHKMQRVFFKESLTTIYVENMLRLEKGAMSEFVGRKILTALVDKLLDLDVEIGWDDILQDDFSKGIFEMELEDDDETTDDINEDSSELPRELSRKSLGGNVIAETLDSLIVLTFEHLESCERDGRLNEVHCVFDILLLSFQRTVLTAYKSKFAQFVIFYACALDADVCGERFAVSLADMFVSCNDPPLTSVAFLAHLKNLHLHVSNLFYLRGLNVLDLRWEESKMSAVSYLASYLSRGKFLSTSLVTTILKRLVDWCLEYGKTVDADPNPKAHKVFYSGCQRKYLAYGFDLCDLRIIIFGEGLAYPRLCVLLVSQKLWHTSSLCTRFTFFLMIYFPQAIMYVLCFRMRSILEIPRLKSQVLLMPIGPVLTHRLSPLKVCLPSIVEEFLRQAKVANLFTPSETFIFNGLLESEYSKTYGGIERLDMFFPFDPCLLKTCDRYLRPHFVYWSMVRPTYDEEENGGSSDEDVAEVFPDRIEENLMDDEAMAGSYDYRDFDLDEFDSALNKMSITPRNSLQYQRDFVQMPSRIRPSMSPESL

Homology

[Close]

BLAST of Cla97C05G081870 vs. NCBI nr
Match: XP_038896673.1 (RNA polymerase I-specific transcription initiation factor RRN3-like [Benincasa hispida])

HSP 1 Score: 1108.2 bits (2865), Expect = 0.0e+00
Identity = 588/741 (79.35%), Postives = 611/741 (82.46%), Query Frame = 0


Query: 1   MGVELENGQAQLHDMEDVNLTDAQLIDFVRGFLSSVSLGDNDGYNQLVGVIHHRDRLSPD 60
           MG E ENGQAQLHDMEDVNLTDAQL+DF+RGFLSSVSLGDNDGYNQL+GVIHH+DRLSPD
Sbjct: 1   MGAEFENGQAQLHDMEDVNLTDAQLVDFIRGFLSSVSLGDNDGYNQLIGVIHHKDRLSPD 60

Query: 61  DVALLVTCLKALSGAVSCIDIVLHESLLAAVSLSLNSESLSRNFVVVMVALSQIFKMSLW 120
           ++ALLVTCLKALSGAVSCIDI+LHESLL+A                       IFKMSLW
Sbjct: 61  EIALLVTCLKALSGAVSCIDIILHESLLSA-----------------------IFKMSLW 120

Query: 121 DYGPNVMDALIELIISLAVSSGKYVDACLDMLVNNFMPPYSYKDFLKKPHGLNRKDEVLS 180
           DYGPNVMDALIELIISLAVSSG YVD+CLDMLVNNFMPPYSYKDFLKKPHGL RKDEVLS
Sbjct: 121 DYGPNVMDALIELIISLAVSSGNYVDSCLDMLVNNFMPPYSYKDFLKKPHGLTRKDEVLS 180

Query: 181 RVHTALKDISDLVPLAPLRLEQIVVHKMQRVFFKESLTTIYVENMLRLEKGAMSEFVGRK 240
           RVHTALKDISDLVPLAPLRLEQIVVHKMQRVFFKESLTTIYVENMLRLEKGAMSEFVGRK
Sbjct: 181 RVHTALKDISDLVPLAPLRLEQIVVHKMQRVFFKESLTTIYVENMLRLEKGAMSEFVGRK 240

Query: 241 ILTALVDKLLDLDVEIGWDDILQDDFSKGIFEMELEDDDETTDDINEDSSELPRELSRKS 300
           ILTALVDKLLDLDVEIGWDDILQDDFSKGIFEMELEDDDET DD NEDSSELPRELSRKS
Sbjct: 241 ILTALVDKLLDLDVEIGWDDILQDDFSKGIFEMELEDDDETADDSNEDSSELPRELSRKS 300

Query: 301 LGGNVIAETLDSLIVLTFEHLESCERDGRLNEVHCVFDILLLSFQRTVLTAYKSKFAQFV 360
           LGGNVIAETLDSLIVLTFEHLESCERDGRLNE   VFDILLLSFQRTVLTAYKSKFAQFV
Sbjct: 301 LGGNVIAETLDSLIVLTFEHLESCERDGRLNE---VFDILLLSFQRTVLTAYKSKFAQFV 360

Query: 361 IFYACALDADVCGERFAVSLADMFVSCNDPPLTSVAFLAHLKNLHLHVSNLFYLRGLNVL 420
           IFYACAL  +VCGERFAVSLADMFVSCNDPPLT                           
Sbjct: 361 IFYACALYPEVCGERFAVSLADMFVSCNDPPLT--------------------------- 420

Query: 421 DLRWEESKMSAVSYLASYLSRGKFLSTSLVTTILKRLVDWCLEYGKTVDADPNPKAHKVF 480
                  +MSAVSYLASYLSRGKFLSTSLVT+ILKRLVDWCLEYGKT+D +PNPKAHKVF
Sbjct: 421 -------RMSAVSYLASYLSRGKFLSTSLVTSILKRLVDWCLEYGKTLDVEPNPKAHKVF 480

Query: 481 YSGCQRKYLAYGFDLCDLRIIIFGEGLAYPRLCVLLVSQKLWHTSSLCTRFTFFLMIYFP 540
           YSGC                                                        
Sbjct: 481 YSGC-------------------------------------------------------- 540

Query: 541 QAIMYVLCFRMRSILEIPRLKSQVLLMPIGPVLTHRLSPLKVCLPSIVEEFLRQAKVANL 600
           QAIMYVLCFRMRSILEIPRLKSQ+LLMPIGPVLTHRLSPLKVCLPSIVEEFLRQAKVANL
Sbjct: 541 QAIMYVLCFRMRSILEIPRLKSQLLLMPIGPVLTHRLSPLKVCLPSIVEEFLRQAKVANL 600

Query: 601 FTPSETFIFNGLLESEYSKTYGGIERLDMFFPFDPCLLKTCDRYLRPHFVYWSMVRPTYD 660
           FTPSET++FNGLLES+YS+T+GGIERLDMFFPFDPCLLK CDRYLRPHFVYWSMVRPTYD
Sbjct: 601 FTPSETYVFNGLLESDYSRTFGGIERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVRPTYD 625

Query: 661 EEE-NGGSSDEDVAEVFPDRIEENLMDDEAMAGSYDYRDFDLDEFDSALNKMSITPRNSL 720
           EEE +GGSSDEDVAEVFPDRIEENLMDDEAMA SYD +DFDLDEFDSALN MSITPRNSL
Sbjct: 661 EEEGDGGSSDEDVAEVFPDRIEENLMDDEAMARSYDDQDFDLDEFDSALNNMSITPRNSL 625

Query: 721 QYQRDFVQMPSRIRPSMSPES 741
           QY+RDFVQMPSRIRPSMSPES
Sbjct: 721 QYRRDFVQMPSRIRPSMSPES 625

[Close]

BLAST of Cla97C05G081870 vs. NCBI nr
Match: KAA0048966.1 (RNA polymerase I-specific transcription initiation factor RRN3 [Cucumis melo var. makuwa])

HSP 1 Score: 1101.7 bits (2848), Expect = 0.0e+00
Identity = 589/745 (79.06%), Postives = 621/745 (83.36%), Query Frame = 0


Query: 1   MGVELENGQAQLHDMEDVNLTDAQLIDFVRGFLSSVSLGDNDGYNQLVGVIHHRDRLSPD 60
           MG ELEN QAQLHDMEDVNLTDAQL+DF+RGFLSSVSLGD DGYNQLVGVIHHRDRLSPD
Sbjct: 1   MGAELENNQAQLHDMEDVNLTDAQLVDFIRGFLSSVSLGDTDGYNQLVGVIHHRDRLSPD 60

Query: 61  DVALLVTCLKALSGAVSCIDIVLHESLLAAVSLSLNSESLSRNFVVVMVALSQIFKMSLW 120
           +VALLVTCLKALSGAVSCIDI+ HESLLAAVSL LNSESLS NFVVVM  LSQIFKMSLW
Sbjct: 61  EVALLVTCLKALSGAVSCIDIIQHESLLAAVSLCLNSESLSCNFVVVMEVLSQIFKMSLW 120

Query: 121 DYGPNVMDALIELIISLAVSSGKYVDACLDMLVNNFMPPYSYKDFLKKPHGLNRKDEVLS 180
           DYGPNVMD+LIELIISLAVS+GKYV++CLDMLVNNFMPP SY DFLKKPHGL +KDEVLS
Sbjct: 121 DYGPNVMDSLIELIISLAVSNGKYVNSCLDMLVNNFMPPNSYMDFLKKPHGLTKKDEVLS 180

Query: 181 RVHTALKDISDLVPLAPLRLEQIVVHKMQRVFFKESLTTIYVENMLRLEKGAMSEFVGRK 240
           RVHTALKDISDLVPLAPLRLEQIVVHKMQRVFFKESLTTIYVENMLRLEKGA+SEFVGRK
Sbjct: 181 RVHTALKDISDLVPLAPLRLEQIVVHKMQRVFFKESLTTIYVENMLRLEKGALSEFVGRK 240

Query: 241 ILTALVDKLLDLDVEIGWDDILQDDFSKGIFEMELEDDDETTDDINEDSSELPRELSRKS 300
           ILTALVDKLLDLDVEIGWDDILQDDFSKGIFEMELEDDDETTDDINEDSSELPRELSR+S
Sbjct: 241 ILTALVDKLLDLDVEIGWDDILQDDFSKGIFEMELEDDDETTDDINEDSSELPRELSRRS 300

Query: 301 LGGNVIAETLDSLIVLTFEHLESCERDGRLNEVHCVFDILLLSFQRTVLTAYKSKFAQFV 360
           LGGNVIAETLDSLIVLTFEHLESCERDGRLNE   VFDILLLSFQRTVLTAYKSKFAQFV
Sbjct: 301 LGGNVIAETLDSLIVLTFEHLESCERDGRLNE---VFDILLLSFQRTVLTAYKSKFAQFV 360

Query: 361 IFYACALDADVCGERFAVSLADMFVSCNDPPLTSVAFLAHLKNLHLHVSNLFYLRGLNVL 420
           IFYAC+LD +VCG RFAVSLADMFVSCNDPPL                            
Sbjct: 361 IFYACSLDPEVCGARFAVSLADMFVSCNDPPLI--------------------------- 420

Query: 421 DLRWEESKMSAVSYLASYLSRGKFLSTSLVTTILKRLVDWCLEYGKTVDADPNPKAHKVF 480
                  +MSAVSYLAS+LSRGKFL+TSLVTTILKRLVDWCLEYG+T++ DPNPKAHKVF
Sbjct: 421 -------RMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKVF 480

Query: 481 YSGCQRKYLAYGFDLCDLRIIIFGEGLAYPRLCVLLVSQKLWHTSSLCTRFTFFLMIYFP 540
           YSGC                                                        
Sbjct: 481 YSGC-------------------------------------------------------- 540

Query: 541 QAIMYVLCFRMRSILEIPRLKSQVLLMPIGPVLTHRLSPLKVCLPSIVEEFLRQAKVANL 600
           QAIMYVLCFRMRSILEIPRLKSQ+LLMPIGP+LTHRLSPLKVCLPSIVEEFL+QAKVANL
Sbjct: 541 QAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQAKVANL 600

Query: 601 FTPSETFIFNGLLESEYSKTYGGIERLDMFFPFDPCLLKTCDRYLRPHFVYWSMVRPTY- 660
           FTPSETFIFNGLLESEYS+++GG+ERLDMFFPFDPCLLK CDRYLRPHFVYWSMVRPTY 
Sbjct: 601 FTPSETFIFNGLLESEYSRSFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVRPTYA 648

Query: 661 ---DEEENGGSSDEDVAEVFPDRIEENLMDDEAMAGSYDYRDFDLDEFDSALNKMSITPR 720
              ++EE+GGSSDED AEVFPD IEENLMDD AMA SYD +DFDL   DS LN MSITPR
Sbjct: 661 EEEEQEEDGGSSDED-AEVFPDIIEENLMDDVAMARSYDDQDFDL---DSGLNNMSITPR 648

Query: 721 NSLQYQRDFVQMPSRIRPSMSPESL 742
           NSLQY+ DFV+MPSRIRPSMSPESL
Sbjct: 721 NSLQYRHDFVKMPSRIRPSMSPESL 648

[Close]

BLAST of Cla97C05G081870 vs. NCBI nr
Match: XP_038901148.1 (RNA polymerase I-specific transcription initiation factor RRN3-like [Benincasa hispida])

HSP 1 Score: 1091.6 bits (2822), Expect = 0.0e+00
Identity = 582/741 (78.54%), Postives = 607/741 (81.92%), Query Frame = 0


Query: 1   MGVELENGQAQLHDMEDVNLTDAQLIDFVRGFLSSVSLGDNDGYNQLVGVIHHRDRLSPD 60
           MGVELE GQAQLHDME VNLTDAQL+DFVRGFLSSVSLGDNDGYNQLVGVIHH+DRL+P+
Sbjct: 1   MGVELEKGQAQLHDMEGVNLTDAQLVDFVRGFLSSVSLGDNDGYNQLVGVIHHKDRLTPE 60

Query: 61  DVALLVTCLKALSGAVSCIDIVLHESLLAAVSLSLNSESLSRNFVVVMVALSQIFKMSLW 120
           +VALLVTCLKALSGAVSCIDIVLHESLLAA                       IFK SLW
Sbjct: 61  EVALLVTCLKALSGAVSCIDIVLHESLLAA-----------------------IFKRSLW 120

Query: 121 DYGPNVMDALIELIISLAVSSGKYVDACLDMLVNNFMPPYSYKDFLKKPHGLNRKDEVLS 180
           DYG NVMDALIELIISLAVSSGKYVD+CLDMLVNNFMPPYSYKDFLKKPHGL RKDEVLS
Sbjct: 121 DYGRNVMDALIELIISLAVSSGKYVDSCLDMLVNNFMPPYSYKDFLKKPHGLTRKDEVLS 180

Query: 181 RVHTALKDISDLVPLAPLRLEQIVVHKMQRVFFKESLTTIYVENMLRLEKGAMSEFVGRK 240
           RVHTALKDI DLVPLAPLRLEQIVVHKMQRVFFKESLTTIYVE+MLRLEKGAMSEFVGRK
Sbjct: 181 RVHTALKDILDLVPLAPLRLEQIVVHKMQRVFFKESLTTIYVESMLRLEKGAMSEFVGRK 240

Query: 241 ILTALVDKLLDLDVEIGWDDILQDDFSKGIFEMELEDDDETTDDINEDSSELPRELSRKS 300
           ILTALVDKLLDLDVEIGWDDILQDDFSKGIFEMEL DDDETT+DINE SSELPRELSRKS
Sbjct: 241 ILTALVDKLLDLDVEIGWDDILQDDFSKGIFEMELADDDETTEDINEASSELPRELSRKS 300

Query: 301 LGGNVIAETLDSLIVLTFEHLESCERDGRLNEVHCVFDILLLSFQRTVLTAYKSKFAQFV 360
           LGGN+IAETLDSLIVLTFEHLESCERDGRLNE   VFD+LLLSFQRTVLTAYKSKFAQFV
Sbjct: 301 LGGNIIAETLDSLIVLTFEHLESCERDGRLNE---VFDVLLLSFQRTVLTAYKSKFAQFV 360

Query: 361 IFYACALDADVCGERFAVSLADMFVSCNDPPLTSVAFLAHLKNLHLHVSNLFYLRGLNVL 420
           IFYACALD +VCG RFAV LADMFVSCNDPPLT                           
Sbjct: 361 IFYACALDPEVCGARFAVWLADMFVSCNDPPLT--------------------------- 420

Query: 421 DLRWEESKMSAVSYLASYLSRGKFLSTSLVTTILKRLVDWCLEYGKTVDADPNPKAHKVF 480
                  +M AVSYLASYLSRGKFLSTSLVT ILKRLVDWCLEYGKT+D DPNPKAHKVF
Sbjct: 421 -------RMKAVSYLASYLSRGKFLSTSLVTIILKRLVDWCLEYGKTLDVDPNPKAHKVF 480

Query: 481 YSGCQRKYLAYGFDLCDLRIIIFGEGLAYPRLCVLLVSQKLWHTSSLCTRFTFFLMIYFP 540
           YSGC                                                        
Sbjct: 481 YSGC-------------------------------------------------------- 540

Query: 541 QAIMYVLCFRMRSILEIPRLKSQVLLMPIGPVLTHRLSPLKVCLPSIVEEFLRQAKVANL 600
           QAIMYVLCFRMRSILEIPRLKSQ+LL+PIGPVLTHRLSPLKVCLPSIVEEFLRQA+VANL
Sbjct: 541 QAIMYVLCFRMRSILEIPRLKSQLLLIPIGPVLTHRLSPLKVCLPSIVEEFLRQAEVANL 600

Query: 601 FTPSETFIFNGLLESEYSKTYGGIERLDMFFPFDPCLLKTCDRYLRPHFVYWSMVRPTYD 660
           F+PSETFIFNGLLESEYS+T+GGIERLDMFFPFDPCLLKTCDRYLRPHFVYWSMVRPTYD
Sbjct: 601 FSPSETFIFNGLLESEYSQTFGGIERLDMFFPFDPCLLKTCDRYLRPHFVYWSMVRPTYD 625

Query: 661 EEENGGSSDEDVAEVFPDRIEENLMDDEAMAGSYDYRDFDLDEFDSALNKMSITPRNSLQ 720
           EEE GGSSDEDVAEVFPDRIEENLMDDEA+A SYD RDFDLDEFDSALN+MSITPRNSLQ
Sbjct: 661 EEEYGGSSDEDVAEVFPDRIEENLMDDEAVARSYDDRDFDLDEFDSALNEMSITPRNSLQ 625

Query: 721 YQRDFVQMPSRIRPSMSPESL 742
           Y+RDFVQMP +IRP++SPESL
Sbjct: 721 YRRDFVQMPLQIRPTISPESL 625

[Close]

BLAST of Cla97C05G081870 vs. NCBI nr
Match: XP_008438040.1 (PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3 [Cucumis melo] >XP_008438041.1 PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3 [Cucumis melo] >XP_008438044.1 PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3 [Cucumis melo] >TYK17601.1 RNA polymerase I-specific transcription initiation factor RRN3 [Cucumis melo var. makuwa])

HSP 1 Score: 1060.1 bits (2740), Expect = 9.0e-306
Identity = 570/745 (76.51%), Postives = 602/745 (80.81%), Query Frame = 0


Query: 1   MGVELENGQAQLHDMEDVNLTDAQLIDFVRGFLSSVSLGDNDGYNQLVGVIHHRDRLSPD 60
           MG ELEN QAQLHDMEDVNLTDAQL+DF+RGFLSSVSLGD DGYNQLVGVIHHRDRLSPD
Sbjct: 1   MGAELENNQAQLHDMEDVNLTDAQLVDFIRGFLSSVSLGDTDGYNQLVGVIHHRDRLSPD 60

Query: 61  DVALLVTCLKALSGAVSCIDIVLHESLLAAVSLSLNSESLSRNFVVVMVALSQIFKMSLW 120
           +VALLVTCLKALSGAVSCIDI+ HESLLAA                       IFKMSLW
Sbjct: 61  EVALLVTCLKALSGAVSCIDIIQHESLLAA-----------------------IFKMSLW 120

Query: 121 DYGPNVMDALIELIISLAVSSGKYVDACLDMLVNNFMPPYSYKDFLKKPHGLNRKDEVLS 180
           DYGPNVMD+LIELIISLAVS+GKYV++CLDMLVNNFMPP SY DFLKKPHGL +KDEVLS
Sbjct: 121 DYGPNVMDSLIELIISLAVSNGKYVNSCLDMLVNNFMPPNSYMDFLKKPHGLTKKDEVLS 180

Query: 181 RVHTALKDISDLVPLAPLRLEQIVVHKMQRVFFKESLTTIYVENMLRLEKGAMSEFVGRK 240
           RVHTALKDISDLVPLAPLRLEQIVVHKMQRVFFKESLTTIYVENMLRLEKGA+SEFVGRK
Sbjct: 181 RVHTALKDISDLVPLAPLRLEQIVVHKMQRVFFKESLTTIYVENMLRLEKGALSEFVGRK 240

Query: 241 ILTALVDKLLDLDVEIGWDDILQDDFSKGIFEMELEDDDETTDDINEDSSELPRELSRKS 300
           ILTALVDKLLDLDVEIGWDDILQDDFSKGIFEMELEDDDETTDDINEDSSELPRELSR+S
Sbjct: 241 ILTALVDKLLDLDVEIGWDDILQDDFSKGIFEMELEDDDETTDDINEDSSELPRELSRRS 300

Query: 301 LGGNVIAETLDSLIVLTFEHLESCERDGRLNEVHCVFDILLLSFQRTVLTAYKSKFAQFV 360
           LGGNVIAETLDSLIVLTFEHLESCERDGRLNE   VFDILLLSFQRTVLTAYKSKFAQFV
Sbjct: 301 LGGNVIAETLDSLIVLTFEHLESCERDGRLNE---VFDILLLSFQRTVLTAYKSKFAQFV 360

Query: 361 IFYACALDADVCGERFAVSLADMFVSCNDPPLTSVAFLAHLKNLHLHVSNLFYLRGLNVL 420
           IFYAC+LD +VCG RFAVSLADMFVSCNDPPL                            
Sbjct: 361 IFYACSLDPEVCGARFAVSLADMFVSCNDPPLI--------------------------- 420

Query: 421 DLRWEESKMSAVSYLASYLSRGKFLSTSLVTTILKRLVDWCLEYGKTVDADPNPKAHKVF 480
                  +MSAVSYLAS+LSRGKFL+TSLVTTILKRLVDWCLEYG+T++ DPNPKAHKVF
Sbjct: 421 -------RMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKVF 480

Query: 481 YSGCQRKYLAYGFDLCDLRIIIFGEGLAYPRLCVLLVSQKLWHTSSLCTRFTFFLMIYFP 540
           YSGC                                                        
Sbjct: 481 YSGC-------------------------------------------------------- 540

Query: 541 QAIMYVLCFRMRSILEIPRLKSQVLLMPIGPVLTHRLSPLKVCLPSIVEEFLRQAKVANL 600
           QAIMYVLCFRMRSILEIPRLKSQ+LLMPIGP+LTHRLSPLKVCLPSIVEEFL+QAKVANL
Sbjct: 541 QAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQAKVANL 600

Query: 601 FTPSETFIFNGLLESEYSKTYGGIERLDMFFPFDPCLLKTCDRYLRPHFVYWSMVRPTY- 660
           FTPSETFIFNGLLESEYS+++GG+ERLDMFFPFDPCLLK CDRYLRPHFVYWSMVRPTY 
Sbjct: 601 FTPSETFIFNGLLESEYSRSFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVRPTYA 625

Query: 661 ---DEEENGGSSDEDVAEVFPDRIEENLMDDEAMAGSYDYRDFDLDEFDSALNKMSITPR 720
              ++EE+GGSSDED AEVFPD IEENLMDD AMA SYD +DFDL   DS LN MSITPR
Sbjct: 661 EEEEQEEDGGSSDED-AEVFPDIIEENLMDDVAMARSYDDQDFDL---DSGLNNMSITPR 625

Query: 721 NSLQYQRDFVQMPSRIRPSMSPESL 742
           NSLQY+ DFV+MPSRIRPSMSPESL
Sbjct: 721 NSLQYRHDFVKMPSRIRPSMSPESL 625

[Close]

BLAST of Cla97C05G081870 vs. NCBI nr
Match: XP_023512334.1 (RNA polymerase I-specific transcription initiation factor RRN3-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023512336.1 RNA polymerase I-specific transcription initiation factor RRN3-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1057.0 bits (2732), Expect = 7.6e-305
Identity = 567/742 (76.42%), Postives = 601/742 (81.00%), Query Frame = 0


Query: 1   MGVELENGQAQLHDMEDVNLTDAQLIDFVRGFLSSVSLGDNDGYNQLVGVIHHRDRLSPD 60
           MGVELENGQAQ  DME VN TD QL+DF+RGFL+SVSLG+ DGY+QLVGVIHHRDRLSPD
Sbjct: 1   MGVELENGQAQFQDMEGVNFTDDQLVDFIRGFLTSVSLGNTDGYHQLVGVIHHRDRLSPD 60

Query: 61  DVALLVTCLKALSGAVSCIDIVLHESLLAAVSLSLNSESLSRNFVVVMVALSQIFKMSLW 120
           +VALLVTCLKALSGAVSCID+VLHESLLAA                       IFKMSLW
Sbjct: 61  EVALLVTCLKALSGAVSCIDVVLHESLLAA-----------------------IFKMSLW 120

Query: 121 DYGPNVMDALIELIISLAVSSGKYVDACLDMLVNNFMPPYSYKDFLKKPHGLNRKDEVLS 180
           DYGPNVMDALIELI SLAVSSGKYVD+CLDMLV NFMPP+SYKDFLKKPHGL RKDEVLS
Sbjct: 121 DYGPNVMDALIELITSLAVSSGKYVDSCLDMLVTNFMPPHSYKDFLKKPHGLTRKDEVLS 180

Query: 181 RVHTALKDISDLVPLAPLRLEQIVVHKMQRVFFKESLTTIYVENMLRLEKGAMSEFVGRK 240
           RVHTALKDISDLVPLAPLRLE IVVHKMQRVFFKESLTTIYVENMLRLEKGAMSEFVGRK
Sbjct: 181 RVHTALKDISDLVPLAPLRLELIVVHKMQRVFFKESLTTIYVENMLRLEKGAMSEFVGRK 240

Query: 241 ILTALVDKLLDLDVEIGWDDILQDDFSKGIFEMELEDDDETTDDINEDSSELPRELSRKS 300
           ILTALVDKLLDLDVEIGWDDILQDDFSKGIFE+ELED++E+TDDI+ED+SELPRELSRKS
Sbjct: 241 ILTALVDKLLDLDVEIGWDDILQDDFSKGIFEIELEDENESTDDIDEDNSELPRELSRKS 300

Query: 301 LGGNVIAETLDSLIVLTFEHLESCERDGRLNEVHCVFDILLLSFQRTVLTAYKSKFAQFV 360
           LGGNVIAETLDSLIVLTFEHLESCERDGRLNE   VFDILLLSFQRTVLTAYKSKFAQFV
Sbjct: 301 LGGNVIAETLDSLIVLTFEHLESCERDGRLNE---VFDILLLSFQRTVLTAYKSKFAQFV 360

Query: 361 IFYACALDADVCGERFAVSLADMFVSCNDPPLTSVAFLAHLKNLHLHVSNLFYLRGLNVL 420
           IFYACALD +VCG RF+V+LADMFVSCN  PLT                           
Sbjct: 361 IFYACALDPEVCGARFSVTLADMFVSCNGLPLT--------------------------- 420

Query: 421 DLRWEESKMSAVSYLASYLSRGKFLSTSLVTTILKRLVDWCLEYGKTVDADPNPKAHKVF 480
                  +MSA+SYLASYLSRGKFLSTSLVTTILKRLVDWCLEYGKT D D NPKAHK+F
Sbjct: 421 -------RMSAISYLASYLSRGKFLSTSLVTTILKRLVDWCLEYGKTHDVDLNPKAHKIF 480

Query: 481 YSGCQRKYLAYGFDLCDLRIIIFGEGLAYPRLCVLLVSQKLWHTSSLCTRFTFFLMIYFP 540
           YSGC                                                        
Sbjct: 481 YSGC-------------------------------------------------------- 540

Query: 541 QAIMYVLCFRMRSILEIPRLKSQVLLMPIGPVLTHRLSPLKVCLPSIVEEFLRQAKVANL 600
           QAIMYVLCFRMRSILEIPRLKSQ+LLMPIG +LTHRLSPLKVCLPSIVEEFLRQAKVANL
Sbjct: 541 QAIMYVLCFRMRSILEIPRLKSQLLLMPIGRILTHRLSPLKVCLPSIVEEFLRQAKVANL 600

Query: 601 FTPSETFIFNGLLESEYSKTYGGIERLDMFFPFDPCLLKTCDRYLRPHFVYWSMVRPTYD 660
           FTPSETFIFNGLLESEYSKT+GGIERLDMFFP+DPCLLK CDRYLRP+FVYWSMVRPTYD
Sbjct: 601 FTPSETFIFNGLLESEYSKTFGGIERLDMFFPYDPCLLKRCDRYLRPYFVYWSMVRPTYD 626

Query: 661 -EEENGGSSDEDVAEVFPDRIEENLMDDEAMAGSYDYRDFDLDEFDSALNKMSITPRNSL 720
            EEE+ GSSDEDVAEVFPDRIEENLMDDEAMA SYD R+FDLDEFD+AL+KMSITPRNSL
Sbjct: 661 EEEEDEGSSDEDVAEVFPDRIEENLMDDEAMARSYDDREFDLDEFDNALDKMSITPRNSL 626

Query: 721 QYQRDFVQMPSRIRPSMSPESL 742
            +++D V+MPSRIRPSMSPESL
Sbjct: 721 PFRQDCVRMPSRIRPSMSPESL 626

[Close]

BLAST of Cla97C05G081870 vs. ExPASy Swiss-Prot
Match: Q10110 (RNA polymerase I-specific transcription initiation factor rrn3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rrn3 PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 2.3e-09
Identity = 87/365 (23.84%), Postives = 147/365 (40.27%), Query Frame = 0


Query: 170 HGLNRKDEV---LSRVHTALKDISDLVPLAPLRLEQIVVHKMQRVFFKESLTT--IYVEN 229
           H L R D +       H ALK + +LVP A   L   ++ +    +  ESL     Y+ N
Sbjct: 161 HMLYRPDSLAIHYEHAHMALKYVLELVPRAHSFLYSSILEEFP--YKDESLLAQMTYISN 220

Query: 230 MLRLEKGAMSEFVGRKILTALVDKLLDLDVEIGWDDILQDDFSKGIFEMELEDDDETTDD 289
           +L + +   S  +   +L A++DK++ +DVEI               ++E++DDDE  D+
Sbjct: 221 VLSICEYVPS--IKGPVLHAIIDKIIQIDVEI---------------QVEVDDDDEEEDE 280

Query: 290 I--------NEDSS--------ELPRELSRKSLGGNVIA-----------ETLDSLIVLT 349
           +        N DS         E    +S +     ++            + LD L+   
Sbjct: 281 VVTDDDGTSNADSEVITASTLYERHTAISSEMTSSTILTPPSLTDTRQLMQQLDQLLYTL 340

Query: 350 FEHLESCERDGRLNEVHCVFDILLLSFQRTVLTAYKSKFAQFVIFYACALDADVCGERFA 409
           F +L+S        + + V++ L+ SF  TVL  ++ ++ QF+IF+A  L          
Sbjct: 341 FSYLDS-NLKSTSRDRYLVYNSLIKSFVNTVLKTFRCRYTQFLIFWASQL---------- 400

Query: 410 VSLADMFVSCNDPPLTSVAFLAHLKNLHLHVSNLFYLRGLNVLDLRWEESKMSAVSYLAS 469
                      DP  T + FL  L  + L  S  + LR             +S   Y+ S
Sbjct: 401 -----------DPEFTDI-FLGVLTEVCLDPSQPYTLR-------------LSGAMYIGS 460

Query: 470 YLSRGKFLSTSLVTTILKRLVDWCLEYGKTVD---ADPNPKAHKVFYSGCQRKYLAYGF- 497
           Y++R K L  + +  I+  +  W   Y    +   +D     H VFY+  Q  +  + F 
Sbjct: 461 YVARAKALEKNTIQIIVNMMTRWVEAYLDQCENELSDDLLSKHSVFYAINQSIFYIFCFR 470

[Close]

BLAST of Cla97C05G081870 vs. ExPASy Swiss-Prot
Match: P36070 (RNA polymerase I-specific transcription initiation factor RRN3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RRN3 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 6.2e-07
Identity = 72/305 (23.61%), Postives = 124/305 (40.66%), Query Frame = 0


Query: 221 YVENMLRLEKGAMSEFVGRKILTALVDKLLDLDVEIGWD-DILQDDF-SKGIFEMELEDD 280
           Y  N+L+L +G  SE +G +I + L++K++ +DVE+  + D L DD     + E++LEDD
Sbjct: 211 YTSNLLKL-RGYCSE-LGFQIWSLLIEKIISIDVELQNELDELDDDVDDDDLEEVDLEDD 270

Query: 281 DETTDDINEDSSE----LPRELSRKSLGGN----------------------------VI 340
           D+  DD  +D  E       EL   +  G+                             +
Sbjct: 271 DDLDDDSGDDDDENCGNSNEELRSGAADGSQSDSEDMDIIEGMDGTEEYNVELTQGIKEL 330

Query: 341 AETLDSLIVLTFEHLESCERDGRL--NEVHCVFDILLLSFQRTVLTAYKSKFAQFVIFYA 400
           +  LDS++ L   H+E       L   E   VF+ L   F+  VL  Y ++  Q+++F+ 
Sbjct: 331 STKLDSILTLVSTHVEEQVTPESLESGEGVGVFNTLTTLFKTHVLPTYYTRSIQYIMFHV 390

Query: 401 CALDADVCGERFAVSLADMFVSCNDPPLTSVAFLAHLKNLHLHVSNLFYLRGLNVLDLRW 460
                ++  + F V+L D+  + N+                                   
Sbjct: 391 SQQQLELM-DSFLVTLIDISFAVNEA---------------------------------- 450

Query: 461 EESKMSAVSYLASYLSRGKFLSTSLVTTILKRLVDW----CLEYGKTVDADPNPKAHKVF 486
            E K+ ++ YL SY++R K LS + +  +   L  W     +E  + VD     +  K F
Sbjct: 451 AEKKIKSLQYLGSYIARAKKLSRTQIIFVASYLTSWLNRYVIEREEEVDQRGGMERFKHF 478

[Close]

BLAST of Cla97C05G081870 vs. ExPASy Swiss-Prot
Match: Q5R4N9 (RNA polymerase I-specific transcription initiation factor RRN3 OS=Pongo abelii OX=9601 GN=RRN3 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.8e-06
Identity = 68/284 (23.94%), Postives = 100/284 (35.21%), Query Frame = 0


Query: 383 MFVSCNDPPLTSVAFLAHLKNLHLHVSNLFYLRGLNVLDLRWEESKMSAVSYLASYLSRG 442
           MF  C+     + AFL HL       SN   +R              +A +Y+ S+L+R 
Sbjct: 367 MFYLCSFKLGFAEAFLEHLWKKLQDPSNPAIIR-------------QAAGNYIGSFLARA 426

Query: 443 KFLSTSLVTTILKRLVDWCLEYGKTVDADP----NPKAHKVFYSGCQRKYLAYGFDLCDL 502
           KF+    V + L  LV+W   Y    D+      +   H  FYS CQ  +  + F    L
Sbjct: 427 KFIPLITVRSCLDLLVNWLHIYLNNQDSGTKAFCDVALHGPFYSACQAVFYTFVFRHKQL 486

Query: 503 RIIIFGEGLAYPRLCVLLVSQKLWHTSSLCTRFTFFLMIYFPQAIMYVLCFRMRSILEIP 562
                 EGL Y                                               + 
Sbjct: 487 LSGNLKEGLRY-----------------------------------------------LQ 546

Query: 563 RLKSQVLLMPIGPVLTHRLSPLKVCLPSIVEEFLRQAKVANLFTPSETFIF----NGLLE 622
            L  + ++M        +L+PLK+CLPS+V  F   A + N +     +      N  + 
Sbjct: 547 SLNFEWIVM-------SQLNPLKICLPSVVNFF---AAITNKYQLVFCYTIIERNNRQML 580

Query: 623 SEYSKTYGG------IERLDMFFPFDPCLLKTCDRYLRPHFVYW 653
                T GG         LD FFPFDPC+LK   +++ P +  W
Sbjct: 607 PVIRSTAGGDSVQTCTNPLDTFFPFDPCVLKRSKKFIDPIYQVW 580

[Close]

BLAST of Cla97C05G081870 vs. ExPASy Swiss-Prot
Match: B2RS91 (RNA polymerase I-specific transcription initiation factor RRN3 OS=Mus musculus OX=10090 GN=Rrn3 PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 5.2e-06
Identity = 58/247 (23.48%), Postives = 89/247 (36.03%), Query Frame = 0


Query: 428 KMSAVSYLASYLSRGKFLSTSLVTTILKRLVDWCLEYGKTVDADPNPKA------HKVFY 487
           + +A +Y+ S+L+R KF+    V T L  LV+W   Y    + D   KA      H  FY
Sbjct: 398 RQAAANYIGSFLARAKFIPLITVKTCLDLLVNWLHMY--LTNQDSGTKAFCDVALHGPFY 457

Query: 488 SGCQRKYLAYGFDLCDLRIIIFGEGLAYPRLCVLLVSQKLWHTSSLCTRFTFFLMIYFPQ 547
           S C                                                        Q
Sbjct: 458 SAC--------------------------------------------------------Q 517

Query: 548 AIMYVLCFRMRSILEIPRLKSQVLLMPIG--PVLTHRLSPLKVCLPSIVEEFLRQAKVAN 607
           A+ Y + FR + +L     +    L  +    ++  +L+PLK+CLP +V  F   A + N
Sbjct: 518 AVFYTVVFRHKQLLSGNLKQGLQYLQSLNFERIVLSQLNPLKICLPQVVNFF---AAITN 577

Query: 608 LFTPSETFIFNGLLESEYSK--------TYGG------IERLDMFFPFDPCLLKTCDRYL 653
            +      +F   +    S+        T GG         LD FFPFDPC+LK   +++
Sbjct: 578 KY----QLVFCYTIMERNSRQMLPVIRSTAGGDSVQTCTNPLDTFFPFDPCVLKRSKKFI 579

[Close]

BLAST of Cla97C05G081870 vs. ExPASy Swiss-Prot
Match: Q9NYV6 (RNA polymerase I-specific transcription initiation factor RRN3 OS=Homo sapiens OX=9606 GN=RRN3 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 2.6e-05
Identity = 79/351 (22.51%), Postives = 123/351 (35.04%), Query Frame = 0


Query: 383 MFVSCNDPPLTSVAFLAHLKNLHLHVSNLFYLRGLNVLDLRWEESKMSAVSYLASYLSRG 442
           MF  C+     + AFL HL       SN   +R              +A +Y+ S+L+R 
Sbjct: 368 MFYLCSFKLGFAEAFLEHLWKKLQDPSNPAIIR-------------QAAGNYIGSFLARA 427

Query: 443 KFLSTSLVTTILKRLVDWCLEYGKTVDADP----NPKAHKVFYSGCQRKYLAYGFDLCDL 502
           KF+    V + L  LV+W   Y    D+      +   H  FYS CQ  +  + F    L
Sbjct: 428 KFIPLITVKSCLDLLVNWLHIYLNNQDSGTKAFCDVALHGPFYSACQAVFYTFVFRHKQL 487

Query: 503 RIIIFGEGLAYPRLCVLLVSQKLWHTSSLCTRFTFFLMIYFPQAIMYVLCFRMRSILEIP 562
                 EGL Y                           + F + +M              
Sbjct: 488 LSGNLKEGLQY------------------------LQSLNFERIVM-------------- 547

Query: 563 RLKSQVLLMPIGPVLTHRLSPLKVCLPSIVEEFLRQAKVANLFTPSETFIF----NGLLE 622
                            +L+PLK+CLPS+V  F   A + N +     +      N  + 
Sbjct: 548 ----------------SQLNPLKICLPSVVNFF---AAITNKYQLVFCYTIIERNNRQML 607

Query: 623 SEYSKTYGG------IERLDMFFPFDPCLLKTCDRYLRPHFVYWSMVRPTYDEEENGGSS 682
                T GG         LD FFPFDPC+LK   +++ P +  W        E+ +    
Sbjct: 608 PVIRSTAGGDSVQICTNPLDTFFPFDPCVLKRSKKFIDPIYQVW--------EDMSAEEL 638

Query: 683 DEDVAEVFPDRIEENLMDDEAMAGSYDYRDFDLDEFDSALNKMSITPRNSL 720
            E    +  D +E+   DD+ + G     D  +    S+ +    +P +S+
Sbjct: 668 QEFKKPMKKDIVEDE--DDDFLKGEVPQNDTVIGITPSSFDTHFRSPSSSV 638

[Close]

BLAST of Cla97C05G081870 vs. ExPASy TrEMBL
Match: A0A5A7U3Y2 (RNA polymerase I-specific transcription initiation factor RRN3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G001870 PE=3 SV=1)

HSP 1 Score: 1101.7 bits (2848), Expect = 0.0e+00
Identity = 589/745 (79.06%), Postives = 621/745 (83.36%), Query Frame = 0


Query: 1   MGVELENGQAQLHDMEDVNLTDAQLIDFVRGFLSSVSLGDNDGYNQLVGVIHHRDRLSPD 60
           MG ELEN QAQLHDMEDVNLTDAQL+DF+RGFLSSVSLGD DGYNQLVGVIHHRDRLSPD
Sbjct: 1   MGAELENNQAQLHDMEDVNLTDAQLVDFIRGFLSSVSLGDTDGYNQLVGVIHHRDRLSPD 60

Query: 61  DVALLVTCLKALSGAVSCIDIVLHESLLAAVSLSLNSESLSRNFVVVMVALSQIFKMSLW 120
           +VALLVTCLKALSGAVSCIDI+ HESLLAAVSL LNSESLS NFVVVM  LSQIFKMSLW
Sbjct: 61  EVALLVTCLKALSGAVSCIDIIQHESLLAAVSLCLNSESLSCNFVVVMEVLSQIFKMSLW 120

Query: 121 DYGPNVMDALIELIISLAVSSGKYVDACLDMLVNNFMPPYSYKDFLKKPHGLNRKDEVLS 180
           DYGPNVMD+LIELIISLAVS+GKYV++CLDMLVNNFMPP SY DFLKKPHGL +KDEVLS
Sbjct: 121 DYGPNVMDSLIELIISLAVSNGKYVNSCLDMLVNNFMPPNSYMDFLKKPHGLTKKDEVLS 180

Query: 181 RVHTALKDISDLVPLAPLRLEQIVVHKMQRVFFKESLTTIYVENMLRLEKGAMSEFVGRK 240
           RVHTALKDISDLVPLAPLRLEQIVVHKMQRVFFKESLTTIYVENMLRLEKGA+SEFVGRK
Sbjct: 181 RVHTALKDISDLVPLAPLRLEQIVVHKMQRVFFKESLTTIYVENMLRLEKGALSEFVGRK 240

Query: 241 ILTALVDKLLDLDVEIGWDDILQDDFSKGIFEMELEDDDETTDDINEDSSELPRELSRKS 300
           ILTALVDKLLDLDVEIGWDDILQDDFSKGIFEMELEDDDETTDDINEDSSELPRELSR+S
Sbjct: 241 ILTALVDKLLDLDVEIGWDDILQDDFSKGIFEMELEDDDETTDDINEDSSELPRELSRRS 300

Query: 301 LGGNVIAETLDSLIVLTFEHLESCERDGRLNEVHCVFDILLLSFQRTVLTAYKSKFAQFV 360
           LGGNVIAETLDSLIVLTFEHLESCERDGRLNE   VFDILLLSFQRTVLTAYKSKFAQFV
Sbjct: 301 LGGNVIAETLDSLIVLTFEHLESCERDGRLNE---VFDILLLSFQRTVLTAYKSKFAQFV 360

Query: 361 IFYACALDADVCGERFAVSLADMFVSCNDPPLTSVAFLAHLKNLHLHVSNLFYLRGLNVL 420
           IFYAC+LD +VCG RFAVSLADMFVSCNDPPL                            
Sbjct: 361 IFYACSLDPEVCGARFAVSLADMFVSCNDPPLI--------------------------- 420

Query: 421 DLRWEESKMSAVSYLASYLSRGKFLSTSLVTTILKRLVDWCLEYGKTVDADPNPKAHKVF 480
                  +MSAVSYLAS+LSRGKFL+TSLVTTILKRLVDWCLEYG+T++ DPNPKAHKVF
Sbjct: 421 -------RMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKVF 480

Query: 481 YSGCQRKYLAYGFDLCDLRIIIFGEGLAYPRLCVLLVSQKLWHTSSLCTRFTFFLMIYFP 540
           YSGC                                                        
Sbjct: 481 YSGC-------------------------------------------------------- 540

Query: 541 QAIMYVLCFRMRSILEIPRLKSQVLLMPIGPVLTHRLSPLKVCLPSIVEEFLRQAKVANL 600
           QAIMYVLCFRMRSILEIPRLKSQ+LLMPIGP+LTHRLSPLKVCLPSIVEEFL+QAKVANL
Sbjct: 541 QAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQAKVANL 600

Query: 601 FTPSETFIFNGLLESEYSKTYGGIERLDMFFPFDPCLLKTCDRYLRPHFVYWSMVRPTY- 660
           FTPSETFIFNGLLESEYS+++GG+ERLDMFFPFDPCLLK CDRYLRPHFVYWSMVRPTY 
Sbjct: 601 FTPSETFIFNGLLESEYSRSFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVRPTYA 648

Query: 661 ---DEEENGGSSDEDVAEVFPDRIEENLMDDEAMAGSYDYRDFDLDEFDSALNKMSITPR 720
              ++EE+GGSSDED AEVFPD IEENLMDD AMA SYD +DFDL   DS LN MSITPR
Sbjct: 661 EEEEQEEDGGSSDED-AEVFPDIIEENLMDDVAMARSYDDQDFDL---DSGLNNMSITPR 648

Query: 721 NSLQYQRDFVQMPSRIRPSMSPESL 742
           NSLQY+ DFV+MPSRIRPSMSPESL
Sbjct: 721 NSLQYRHDFVKMPSRIRPSMSPESL 648

[Close]

BLAST of Cla97C05G081870 vs. ExPASy TrEMBL
Match: A0A1S3AV30 (RNA polymerase I-specific transcription initiation factor RRN3 OS=Cucumis melo OX=3656 GN=LOC103483270 PE=3 SV=1)

HSP 1 Score: 1060.1 bits (2740), Expect = 4.3e-306
Identity = 570/745 (76.51%), Postives = 602/745 (80.81%), Query Frame = 0


Query: 1   MGVELENGQAQLHDMEDVNLTDAQLIDFVRGFLSSVSLGDNDGYNQLVGVIHHRDRLSPD 60
           MG ELEN QAQLHDMEDVNLTDAQL+DF+RGFLSSVSLGD DGYNQLVGVIHHRDRLSPD
Sbjct: 1   MGAELENNQAQLHDMEDVNLTDAQLVDFIRGFLSSVSLGDTDGYNQLVGVIHHRDRLSPD 60

Query: 61  DVALLVTCLKALSGAVSCIDIVLHESLLAAVSLSLNSESLSRNFVVVMVALSQIFKMSLW 120
           +VALLVTCLKALSGAVSCIDI+ HESLLAA                       IFKMSLW
Sbjct: 61  EVALLVTCLKALSGAVSCIDIIQHESLLAA-----------------------IFKMSLW 120

Query: 121 DYGPNVMDALIELIISLAVSSGKYVDACLDMLVNNFMPPYSYKDFLKKPHGLNRKDEVLS 180
           DYGPNVMD+LIELIISLAVS+GKYV++CLDMLVNNFMPP SY DFLKKPHGL +KDEVLS
Sbjct: 121 DYGPNVMDSLIELIISLAVSNGKYVNSCLDMLVNNFMPPNSYMDFLKKPHGLTKKDEVLS 180

Query: 181 RVHTALKDISDLVPLAPLRLEQIVVHKMQRVFFKESLTTIYVENMLRLEKGAMSEFVGRK 240
           RVHTALKDISDLVPLAPLRLEQIVVHKMQRVFFKESLTTIYVENMLRLEKGA+SEFVGRK
Sbjct: 181 RVHTALKDISDLVPLAPLRLEQIVVHKMQRVFFKESLTTIYVENMLRLEKGALSEFVGRK 240

Query: 241 ILTALVDKLLDLDVEIGWDDILQDDFSKGIFEMELEDDDETTDDINEDSSELPRELSRKS 300
           ILTALVDKLLDLDVEIGWDDILQDDFSKGIFEMELEDDDETTDDINEDSSELPRELSR+S
Sbjct: 241 ILTALVDKLLDLDVEIGWDDILQDDFSKGIFEMELEDDDETTDDINEDSSELPRELSRRS 300

Query: 301 LGGNVIAETLDSLIVLTFEHLESCERDGRLNEVHCVFDILLLSFQRTVLTAYKSKFAQFV 360
           LGGNVIAETLDSLIVLTFEHLESCERDGRLNE   VFDILLLSFQRTVLTAYKSKFAQFV
Sbjct: 301 LGGNVIAETLDSLIVLTFEHLESCERDGRLNE---VFDILLLSFQRTVLTAYKSKFAQFV 360

Query: 361 IFYACALDADVCGERFAVSLADMFVSCNDPPLTSVAFLAHLKNLHLHVSNLFYLRGLNVL 420
           IFYAC+LD +VCG RFAVSLADMFVSCNDPPL                            
Sbjct: 361 IFYACSLDPEVCGARFAVSLADMFVSCNDPPLI--------------------------- 420

Query: 421 DLRWEESKMSAVSYLASYLSRGKFLSTSLVTTILKRLVDWCLEYGKTVDADPNPKAHKVF 480
                  +MSAVSYLAS+LSRGKFL+TSLVTTILKRLVDWCLEYG+T++ DPNPKAHKVF
Sbjct: 421 -------RMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKVF 480

Query: 481 YSGCQRKYLAYGFDLCDLRIIIFGEGLAYPRLCVLLVSQKLWHTSSLCTRFTFFLMIYFP 540
           YSGC                                                        
Sbjct: 481 YSGC-------------------------------------------------------- 540

Query: 541 QAIMYVLCFRMRSILEIPRLKSQVLLMPIGPVLTHRLSPLKVCLPSIVEEFLRQAKVANL 600
           QAIMYVLCFRMRSILEIPRLKSQ+LLMPIGP+LTHRLSPLKVCLPSIVEEFL+QAKVANL
Sbjct: 541 QAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQAKVANL 600

Query: 601 FTPSETFIFNGLLESEYSKTYGGIERLDMFFPFDPCLLKTCDRYLRPHFVYWSMVRPTY- 660
           FTPSETFIFNGLLESEYS+++GG+ERLDMFFPFDPCLLK CDRYLRPHFVYWSMVRPTY 
Sbjct: 601 FTPSETFIFNGLLESEYSRSFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVRPTYA 625

Query: 661 ---DEEENGGSSDEDVAEVFPDRIEENLMDDEAMAGSYDYRDFDLDEFDSALNKMSITPR 720
              ++EE+GGSSDED AEVFPD IEENLMDD AMA SYD +DFDL   DS LN MSITPR
Sbjct: 661 EEEEQEEDGGSSDED-AEVFPDIIEENLMDDVAMARSYDDQDFDL---DSGLNNMSITPR 625

Query: 721 NSLQYQRDFVQMPSRIRPSMSPESL 742
           NSLQY+ DFV+MPSRIRPSMSPESL
Sbjct: 721 NSLQYRHDFVKMPSRIRPSMSPESL 625

[Close]

BLAST of Cla97C05G081870 vs. ExPASy TrEMBL
Match: A0A5D3D051 (RNA polymerase I-specific transcription initiation factor RRN3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004710 PE=3 SV=1)

HSP 1 Score: 1060.1 bits (2740), Expect = 4.3e-306
Identity = 570/745 (76.51%), Postives = 602/745 (80.81%), Query Frame = 0


Query: 1   MGVELENGQAQLHDMEDVNLTDAQLIDFVRGFLSSVSLGDNDGYNQLVGVIHHRDRLSPD 60
           MG ELEN QAQLHDMEDVNLTDAQL+DF+RGFLSSVSLGD DGYNQLVGVIHHRDRLSPD
Sbjct: 1   MGAELENNQAQLHDMEDVNLTDAQLVDFIRGFLSSVSLGDTDGYNQLVGVIHHRDRLSPD 60

Query: 61  DVALLVTCLKALSGAVSCIDIVLHESLLAAVSLSLNSESLSRNFVVVMVALSQIFKMSLW 120
           +VALLVTCLKALSGAVSCIDI+ HESLLAA                       IFKMSLW
Sbjct: 61  EVALLVTCLKALSGAVSCIDIIQHESLLAA-----------------------IFKMSLW 120

Query: 121 DYGPNVMDALIELIISLAVSSGKYVDACLDMLVNNFMPPYSYKDFLKKPHGLNRKDEVLS 180
           DYGPNVMD+LIELIISLAVS+GKYV++CLDMLVNNFMPP SY DFLKKPHGL +KDEVLS
Sbjct: 121 DYGPNVMDSLIELIISLAVSNGKYVNSCLDMLVNNFMPPNSYMDFLKKPHGLTKKDEVLS 180

Query: 181 RVHTALKDISDLVPLAPLRLEQIVVHKMQRVFFKESLTTIYVENMLRLEKGAMSEFVGRK 240
           RVHTALKDISDLVPLAPLRLEQIVVHKMQRVFFKESLTTIYVENMLRLEKGA+SEFVGRK
Sbjct: 181 RVHTALKDISDLVPLAPLRLEQIVVHKMQRVFFKESLTTIYVENMLRLEKGALSEFVGRK 240

Query: 241 ILTALVDKLLDLDVEIGWDDILQDDFSKGIFEMELEDDDETTDDINEDSSELPRELSRKS 300
           ILTALVDKLLDLDVEIGWDDILQDDFSKGIFEMELEDDDETTDDINEDSSELPRELSR+S
Sbjct: 241 ILTALVDKLLDLDVEIGWDDILQDDFSKGIFEMELEDDDETTDDINEDSSELPRELSRRS 300

Query: 301 LGGNVIAETLDSLIVLTFEHLESCERDGRLNEVHCVFDILLLSFQRTVLTAYKSKFAQFV 360
           LGGNVIAETLDSLIVLTFEHLESCERDGRLNE   VFDILLLSFQRTVLTAYKSKFAQFV
Sbjct: 301 LGGNVIAETLDSLIVLTFEHLESCERDGRLNE---VFDILLLSFQRTVLTAYKSKFAQFV 360

Query: 361 IFYACALDADVCGERFAVSLADMFVSCNDPPLTSVAFLAHLKNLHLHVSNLFYLRGLNVL 420
           IFYAC+LD +VCG RFAVSLADMFVSCNDPPL                            
Sbjct: 361 IFYACSLDPEVCGARFAVSLADMFVSCNDPPLI--------------------------- 420

Query: 421 DLRWEESKMSAVSYLASYLSRGKFLSTSLVTTILKRLVDWCLEYGKTVDADPNPKAHKVF 480
                  +MSAVSYLAS+LSRGKFL+TSLVTTILKRLVDWCLEYG+T++ DPNPKAHKVF
Sbjct: 421 -------RMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGETLNVDPNPKAHKVF 480

Query: 481 YSGCQRKYLAYGFDLCDLRIIIFGEGLAYPRLCVLLVSQKLWHTSSLCTRFTFFLMIYFP 540
           YSGC                                                        
Sbjct: 481 YSGC-------------------------------------------------------- 540

Query: 541 QAIMYVLCFRMRSILEIPRLKSQVLLMPIGPVLTHRLSPLKVCLPSIVEEFLRQAKVANL 600
           QAIMYVLCFRMRSILEIPRLKSQ+LLMPIGP+LTHRLSPLKVCLPSIVEEFL+QAKVANL
Sbjct: 541 QAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLQQAKVANL 600

Query: 601 FTPSETFIFNGLLESEYSKTYGGIERLDMFFPFDPCLLKTCDRYLRPHFVYWSMVRPTY- 660
           FTPSETFIFNGLLESEYS+++GG+ERLDMFFPFDPCLLK CDRYLRPHFVYWSMVRPTY 
Sbjct: 601 FTPSETFIFNGLLESEYSRSFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVRPTYA 625

Query: 661 ---DEEENGGSSDEDVAEVFPDRIEENLMDDEAMAGSYDYRDFDLDEFDSALNKMSITPR 720
              ++EE+GGSSDED AEVFPD IEENLMDD AMA SYD +DFDL   DS LN MSITPR
Sbjct: 661 EEEEQEEDGGSSDED-AEVFPDIIEENLMDDVAMARSYDDQDFDL---DSGLNNMSITPR 625

Query: 721 NSLQYQRDFVQMPSRIRPSMSPESL 742
           NSLQY+ DFV+MPSRIRPSMSPESL
Sbjct: 721 NSLQYRHDFVKMPSRIRPSMSPESL 625

[Close]

BLAST of Cla97C05G081870 vs. ExPASy TrEMBL
Match: A0A0A0L7G6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122360 PE=3 SV=1)

HSP 1 Score: 1053.5 bits (2723), Expect = 4.1e-304
Identity = 566/744 (76.08%), Postives = 598/744 (80.38%), Query Frame = 0


Query: 1   MGVELENGQAQLHDMEDVNLTDAQLIDFVRGFLSSVSLGDNDGYNQLVGVIHHRDRLSPD 60
           MG ELEN QAQLH MEDVNLTDAQL+DF+RGFLSSVSLGD DGYNQLVGVIHHRDRLSPD
Sbjct: 1   MGAELENNQAQLHAMEDVNLTDAQLVDFIRGFLSSVSLGDIDGYNQLVGVIHHRDRLSPD 60

Query: 61  DVALLVTCLKALSGAVSCIDIVLHESLLAAVSLSLNSESLSRNFVVVMVALSQIFKMSLW 120
           +VALLVTCLKALSGAVSCIDI+LHESLLAA                       IFKMSLW
Sbjct: 61  EVALLVTCLKALSGAVSCIDIILHESLLAA-----------------------IFKMSLW 120

Query: 121 DYGPNVMDALIELIISLAVSSGKYVDACLDMLVNNFMPPYSYKDFLKKPHGLNRKDEVLS 180
           DYG NVMDALIELIISLAVS+GKYVD+CLDMLVNNFMPP SY D LKKPHGL RK+EVLS
Sbjct: 121 DYGSNVMDALIELIISLAVSNGKYVDSCLDMLVNNFMPPNSYMDLLKKPHGLTRKEEVLS 180

Query: 181 RVHTALKDISDLVPLAPLRLEQIVVHKMQRVFFKESLTTIYVENMLRLEKGAMSEFVGRK 240
           RVHTALKDISDLVPLAPLRLEQ VVHKMQRVFF ESLTTIYVENMLRLEKGA+SEFVGRK
Sbjct: 181 RVHTALKDISDLVPLAPLRLEQKVVHKMQRVFFNESLTTIYVENMLRLEKGALSEFVGRK 240

Query: 241 ILTALVDKLLDLDVEIGWDDILQDDFSKGIFEMELEDDDETTDDINEDSSELPRELSRKS 300
           ILTALVDKLLDLDVEIGWDDILQDDFSKGIFEMELEDDD+TTDDINEDSSELPRELSR+S
Sbjct: 241 ILTALVDKLLDLDVEIGWDDILQDDFSKGIFEMELEDDDDTTDDINEDSSELPRELSRRS 300

Query: 301 LGGNVIAETLDSLIVLTFEHLESCERDGRLNEVHCVFDILLLSFQRTVLTAYKSKFAQFV 360
           LGGNVIAETLDSLIVLTFEHLESCERDGRLNE   VFDILLLSFQRTVLTAYKSKFAQF+
Sbjct: 301 LGGNVIAETLDSLIVLTFEHLESCERDGRLNE---VFDILLLSFQRTVLTAYKSKFAQFI 360

Query: 361 IFYACALDADVCGERFAVSLADMFVSCNDPPLTSVAFLAHLKNLHLHVSNLFYLRGLNVL 420
           +FYAC+LD +VCG RFA+SLADMFVSCNDPPL                            
Sbjct: 361 VFYACSLDPEVCGARFAISLADMFVSCNDPPLI--------------------------- 420

Query: 421 DLRWEESKMSAVSYLASYLSRGKFLSTSLVTTILKRLVDWCLEYGKTVDADPNPKAHKVF 480
                  +MSAVSYLAS+LSRGKFL+TSLVTTILKRLVDWCLEYGKT++ DPNPKAHKVF
Sbjct: 421 -------RMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGKTLNVDPNPKAHKVF 480

Query: 481 YSGCQRKYLAYGFDLCDLRIIIFGEGLAYPRLCVLLVSQKLWHTSSLCTRFTFFLMIYFP 540
           YSGC                                                        
Sbjct: 481 YSGC-------------------------------------------------------- 540

Query: 541 QAIMYVLCFRMRSILEIPRLKSQVLLMPIGPVLTHRLSPLKVCLPSIVEEFLRQAKVANL 600
           QAIMYVLCFRMRSILEIPRLKSQ+LLMPIGP+LTHRLSPLKVCLPSIVEEFLRQAKVANL
Sbjct: 541 QAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLRQAKVANL 600

Query: 601 FTPSETFIFNGLLESEYSKTYGGIERLDMFFPFDPCLLKTCDRYLRPHFVYWSMVRPTYD 660
           FTPSE FIFNGLLES+YS+++GG+ERLDMFFPFDPCLLK CDRYLRPHFVYWSMVRPTYD
Sbjct: 601 FTPSENFIFNGLLESDYSRSFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVRPTYD 624

Query: 661 EEE-----NGGSSDEDVAEVFPDRIEENLMDDEAMAGSYDYRDFDLDEFDSALNKMSITP 720
           EEE     +GGSSDED AE+FPDRI+ENLMDDEAMA SYD +DFDL   DS LNKMSITP
Sbjct: 661 EEEEEEEDDGGSSDED-AEIFPDRIDENLMDDEAMAISYDDQDFDL---DSGLNKMSITP 624

Query: 721 RNSLQYQRDFVQMPSRIRPSMSPE 740
           RNSLQY+ DFVQMPSRIRPSMSPE
Sbjct: 721 RNSLQYRCDFVQMPSRIRPSMSPE 624

[Close]

BLAST of Cla97C05G081870 vs. ExPASy TrEMBL
Match: A0A6J1F0A3 (RNA polymerase I-specific transcription initiation factor RRN3-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111438313 PE=3 SV=1)

HSP 1 Score: 1052.4 bits (2720), Expect = 9.1e-304
Identity = 566/742 (76.28%), Postives = 599/742 (80.73%), Query Frame = 0


Query: 1   MGVELENGQAQLHDMEDVNLTDAQLIDFVRGFLSSVSLGDNDGYNQLVGVIHHRDRLSPD 60
           MGVELENGQAQ  DME VN TD QL+DF+RGFL+SVSLG+ DGY+QLVGVIHHR RLS D
Sbjct: 1   MGVELENGQAQFQDMEGVNFTDDQLVDFIRGFLTSVSLGNTDGYHQLVGVIHHRGRLSAD 60

Query: 61  DVALLVTCLKALSGAVSCIDIVLHESLLAAVSLSLNSESLSRNFVVVMVALSQIFKMSLW 120
           +VALLVTCLKALSGAVSCID+VLHESLLAA                       IFKMSLW
Sbjct: 61  EVALLVTCLKALSGAVSCIDVVLHESLLAA-----------------------IFKMSLW 120

Query: 121 DYGPNVMDALIELIISLAVSSGKYVDACLDMLVNNFMPPYSYKDFLKKPHGLNRKDEVLS 180
           DYGPNVMDALIELI SLAVSSGKYVD+CLDMLV NFMPP+SYKDFLKKPHGL RKDEVLS
Sbjct: 121 DYGPNVMDALIELITSLAVSSGKYVDSCLDMLVTNFMPPHSYKDFLKKPHGLTRKDEVLS 180

Query: 181 RVHTALKDISDLVPLAPLRLEQIVVHKMQRVFFKESLTTIYVENMLRLEKGAMSEFVGRK 240
           RVHTALKDISDLVPLAPLRLE IVVHKMQRVFFKESLTTIYVENMLRLEKGAMSEFVGRK
Sbjct: 181 RVHTALKDISDLVPLAPLRLELIVVHKMQRVFFKESLTTIYVENMLRLEKGAMSEFVGRK 240

Query: 241 ILTALVDKLLDLDVEIGWDDILQDDFSKGIFEMELEDDDETTDDINEDSSELPRELSRKS 300
           ILTALVDKLLDLDVEIGWDDILQDDFSKGIFE+ELEDD+E+TDDI+EDSSELPRELSRKS
Sbjct: 241 ILTALVDKLLDLDVEIGWDDILQDDFSKGIFEIELEDDNESTDDIDEDSSELPRELSRKS 300

Query: 301 LGGNVIAETLDSLIVLTFEHLESCERDGRLNEVHCVFDILLLSFQRTVLTAYKSKFAQFV 360
           LGGNVIAETLDSLIVLTFEHLESCERDGRL+E   VFDILLLSFQRTVLTAYKSKFAQFV
Sbjct: 301 LGGNVIAETLDSLIVLTFEHLESCERDGRLSE---VFDILLLSFQRTVLTAYKSKFAQFV 360

Query: 361 IFYACALDADVCGERFAVSLADMFVSCNDPPLTSVAFLAHLKNLHLHVSNLFYLRGLNVL 420
           IFYACALD +VCG RFAV+LADMFVSCN  PLT                           
Sbjct: 361 IFYACALDPEVCGARFAVTLADMFVSCNGLPLT--------------------------- 420

Query: 421 DLRWEESKMSAVSYLASYLSRGKFLSTSLVTTILKRLVDWCLEYGKTVDADPNPKAHKVF 480
                  +MSA+SYLASYLSRGKFLSTSLVTTILKRLVDWCLEYGKT D D NPKAHK+F
Sbjct: 421 -------RMSAISYLASYLSRGKFLSTSLVTTILKRLVDWCLEYGKTHDVDLNPKAHKIF 480

Query: 481 YSGCQRKYLAYGFDLCDLRIIIFGEGLAYPRLCVLLVSQKLWHTSSLCTRFTFFLMIYFP 540
           YSGC                                                        
Sbjct: 481 YSGC-------------------------------------------------------- 540

Query: 541 QAIMYVLCFRMRSILEIPRLKSQVLLMPIGPVLTHRLSPLKVCLPSIVEEFLRQAKVANL 600
           QAIMYVLCFRMRSILEIPRLKSQ+LLMPIG +LTHRLSPLKVCLPSIVEEFLRQAKVANL
Sbjct: 541 QAIMYVLCFRMRSILEIPRLKSQLLLMPIGRILTHRLSPLKVCLPSIVEEFLRQAKVANL 600

Query: 601 FTPSETFIFNGLLESEYSKTYGGIERLDMFFPFDPCLLKTCDRYLRPHFVYWSMVRPTYD 660
           FTPSETFIFNGLLESEYSKT+GGIERLDMFFP+DPCLLK CDRYLRP+FVYWSMVRPTYD
Sbjct: 601 FTPSETFIFNGLLESEYSKTFGGIERLDMFFPYDPCLLKRCDRYLRPYFVYWSMVRPTYD 626

Query: 661 -EEENGGSSDEDVAEVFPDRIEENLMDDEAMAGSYDYRDFDLDEFDSALNKMSITPRNSL 720
            EEE+ GSSDEDVAEVFPD+IEENLMDDEAMA SYD R+FDLDEFD+AL+KMSITPRNSL
Sbjct: 661 EEEEDEGSSDEDVAEVFPDKIEENLMDDEAMATSYDNREFDLDEFDNALDKMSITPRNSL 626

Query: 721 QYQRDFVQMPSRIRPSMSPESL 742
            +++D V+MPSRIRPSMSPESL
Sbjct: 721 PFRQDCVRMPSRIRPSMSPESL 626

[Close]

BLAST of Cla97C05G081870 vs. TAIR 10
Match: AT2G34750.1 (RNA polymerase I specific transcription initiation factor RRN3 protein )

HSP 1 Score: 535.0 bits (1377), Expect = 9.4e-152
Identity = 321/733 (43.79%), Postives = 447/733 (60.98%), Query Frame = 0


Query: 15  MEDVNLTDAQLIDFVRGFLSSVSLGDNDGYNQLVGVIHH--RDRLSPDDVALLVTCLKAL 74
           +++V+L+D QL+  VR  L+SV  GD+D Y+++VGV+    ++   PD VA L T LKAL
Sbjct: 20  VDNVDLSDTQLVQTVRKALTSVKTGDSDLYSEMVGVMARDIKEFKDPDVVAQLETVLKAL 79

Query: 75  SGAVSCIDIVLHESLLAAVSLSLNSESLSRNFVVVMVALSQIFKMSLWDYGPNVMDALIE 134
           SGAV+CID++ H+ LL+A                       +F+M LWD+ P+VMDAL+ 
Sbjct: 80  SGAVACIDVLHHQKLLSA-----------------------LFRMKLWDHRPDVMDALVN 139

Query: 135 LIISLAVSSGKYVDACLDMLVNNFMPPYSYKDFLKKPHGLNRKDEVLSRVHTALKDISDL 194
           L+ISLAV+SGKY+D+CL+MLV+NF+PP    + L     LN+K +VLSRVH AL  IS L
Sbjct: 140 LVISLAVTSGKYLDSCLNMLVSNFVPPPWVVNNLSHSRILNKKIDVLSRVHAALLKISIL 199

Query: 195 VPLAPLRLEQIVVHKMQRVFFKESLTTIYVENMLRLEKGAMSEFVGRKILTALVDKLLDL 254
           VPL P RL  ++  +M ++  K+    IYVE++L+LE  ++ +  G  IL  ++++L DL
Sbjct: 200 VPLTPSRLVPMLFQQMPKMHKKDHSIVIYVESLLKLENSSIGQVGGSMILGMVMERLRDL 259

Query: 255 DVEIGWDDILQDDFSKGIFEMELEDDDETTDDINEDSSELP-RELSRKSLGGNVIAETLD 314
           D+EI WDDI QDD S+G+F+MELED  E T     D  ELP   L + +  G+++++ LD
Sbjct: 260 DLEIEWDDIPQDDSSRGMFDMELEDAAEGT---MNDGDELPVGPLKQDTSDGSIVSKLLD 319

Query: 315 SLIVLTFEHLESCERDGRLNEVHCVFDILLLSFQRTVLTAYKSKFAQFVIFYACALDADV 374
            L+V+ FEHLESC+ DGRL++   VF+ L  SF+  +L  YKSKF QF+IFYAC+LD + 
Sbjct: 320 KLMVVAFEHLESCQNDGRLDQ---VFESLFKSFENFILNTYKSKFTQFLIFYACSLDPEN 379

Query: 375 CGERFAVSLADMFVSCNDPPLTSVAFLAHLKNLHLHVSNLFYLRGLNVLDLRWEESKMSA 434
           CG +FA  L ++F+S N                  HV+                 ++MSA
Sbjct: 380 CGVKFASKLVEIFLSSNK-----------------HVA-----------------TRMSA 439

Query: 435 VSYLASYLSRGKFLSTSLVTTILKRLVDWCLEYGKTVDADPNPKAHKVFYSGCQRKYLAY 494
           V+YLAS+L+RGKFL  S V ++LKRL+D C+ Y +T + D  P+AH++F+SGC       
Sbjct: 440 VAYLASFLARGKFLPVSFVASMLKRLIDECVGYCRTCNDDTRPEAHQIFFSGC------- 499

Query: 495 GFDLCDLRIIIFGEGLAYPRLCVLLVSQKLWHTSSLCTRFTFFLMIYFPQAIMYVLCFRM 554
                                                            QAIMYVLCFRM
Sbjct: 500 -------------------------------------------------QAIMYVLCFRM 559

Query: 555 RSILEIPRLKSQVLLMPIGPVLTHRLSPLKVCLPSIVEEFLRQAKVANLFTPSETFIFNG 614
           RSIL++PR +SQ  L P+  +L H+L+PL VCLPS+V EFLRQAK   LF  S++FIF+ 
Sbjct: 560 RSILDVPRFRSQ--LTPLESILMHKLNPLMVCLPSVVAEFLRQAKEGGLFIVSDSFIFDD 613

Query: 615 LLESEYSKTYGGIERLDMFFPFDPCLLKTCDRYLRPHFVYWSMVRPTYDEEENGGSSDED 674
           LLESE S+ +GG ERLD FFPFDPCLLK+ + ++ P+F+YWSMV+ TYDE++     D++
Sbjct: 620 LLESELSRAFGGFERLDTFFPFDPCLLKSSNSFISPNFIYWSMVKATYDEDD-----DDN 613

Query: 675 VAEVFPDRIEENLMDDEAMAGSYDYRDFDLDEFDSALNKMSITPRNSL--QYQRD-FVQM 734
            AEV  +  E++  DDEA             + D ALNKMSITP++S   + +RD  ++M
Sbjct: 680 DAEVIVNGDEDSDEDDEA-------------DLDYALNKMSITPKHSFKNKMERDRLLRM 613

Query: 735 PSRIRPSMSPESL 742
           PSRIRPS SPESL
Sbjct: 740 PSRIRPSTSPESL 613

[Close]

BLAST of Cla97C05G081870 vs. TAIR 10
Match: AT1G30590.1 (RNA polymerase I specific transcription initiation factor RRN3 protein )

HSP 1 Score: 460.7 bits (1184), Expect = 2.2e-129
Identity = 298/725 (41.10%), Postives = 401/725 (55.31%), Query Frame = 0


Query: 15  MEDVNLTDAQLIDFVRGFLSSVSLGDNDGYNQLVGVIHHRDRLSPDDVALLVTCLKALSG 74
           M++   TD  L+  VR  L+SV  GD D Y+QL  V+   +    D VA L T LK+LS 
Sbjct: 16  MDNAEYTDTDLVFAVRKALASVQNGDTDDYSQLKTVMCLTEDADFDAVAQLETVLKSLSV 75

Query: 75  AVSCIDIVLHESLLAAVSLSLNSESLSRNFVVVMVALSQIFKMSLWDYGPNVMDALIELI 134
           +V+ ID+V H+ LL A+SL  +S                        + P+VMDAL++LI
Sbjct: 76  SVAWIDLVHHKDLLEAMSLWYHS------------------------HRPSVMDALVDLI 135

Query: 135 ISLAVSSGKYVDACLDMLVNNFMPPYSYKDFLKKPHGLNRKDEVLSRVHTALKDISDLVP 194
           ISLA +SGKY+D CL+MLV NF  P ++K  + +   + +  EV  RVH AL  IS L+P
Sbjct: 136 ISLAATSGKYLDPCLNMLVRNFSQP-TFKHKVSQTQLVKKMQEVHPRVHAALHKISYLIP 195

Query: 195 LAPLRLEQIVVHKMQRVFFKESLTTIYVENMLRLEKGAMSEFVGRKILTALVDKLLDLDV 254
           LAP  L  I+   M+++  K+     YV+N+LRLE  ++ E VG  IL  +++++LDLD+
Sbjct: 196 LAPWNLVSILAQNMRKIDKKDPSIVTYVDNLLRLENSSIGEVVGSVILMMVMERMLDLDL 255

Query: 255 EIGWDDILQDDFSKGIFEMELEDDDETTDDINEDSSELPRELSRKSLGGNVIAETLDSLI 314
             G      DD + G+F+MELED  E+T  +NE        L + + GGNV++E LD L+
Sbjct: 256 VSGC-----DDSNGGMFDMELEDAVEST--MNEGDEFPVGALKQNTSGGNVVSELLDKLM 315

Query: 315 VLTFEHLESCERDGRLNEVHCVFDILLLSFQRTVLTAYKSKFAQFVIFYACALDADVCGE 374
           VL F HLESC+   RL+E   VF+IL  SF+  +L  YK+KF+QF++FYAC+LD + CG 
Sbjct: 316 VLFFHHLESCQNSDRLDE---VFEILFKSFENYILNTYKTKFSQFLMFYACSLDPENCGV 375

Query: 375 RFAVSLADMFVSCNDPPLTSVAFLAHLKNLHLHVSNLFYLRGLNVLDLRWEESKMSAVSY 434
           RFA  L D+++S N   LT                                  +MSAV+Y
Sbjct: 376 RFASKLLDIYLSSNTCRLT----------------------------------RMSAVAY 435

Query: 435 LASYLSRGKFLSTSLVTTILKRLVDWCLEYGKTVDADPNPKAHKVFYSGCQRKYLAYGFD 494
           LASYLSRGKFL  S V ++LKRLVD C EY  T + D  P+AH+VFYSGC          
Sbjct: 436 LASYLSRGKFLPASFVASMLKRLVDECAEYCGTCNDDVKPEAHQVFYSGC---------- 495

Query: 495 LCDLRIIIFGEGLAYPRLCVLLVSQKLWHTSSLCTRFTFFLMIYFPQAIMYVLCFRMRSI 554
                                                         QAI+YVLCFRMRSI
Sbjct: 496 ----------------------------------------------QAILYVLCFRMRSI 555

Query: 555 LEIPRLKSQVLLMPIGPVLTHRLSPLKVCLPSIVEEFLRQAKVANLFTPSETFIFNGLLE 614
           +EIPR +SQ     +  +L+H+L+PL VCLPS+V EFL+QAK   LF  SE+FIF+ L E
Sbjct: 556 VEIPRFQSQ--FRSLESILSHKLNPLLVCLPSVVSEFLKQAKAGGLFIVSESFIFDDLHE 598

Query: 615 SEYSKTYGGIERLDMFFPFDPCLLKTCDRYLRPHFVYWSMVRPTYDEEENGGSSDEDVAE 674
           SE S+ +GG ERLD FFPFDPCLLK    Y+ P+F +WSMV+ TY E+ +    DE +  
Sbjct: 616 SELSRAFGGFERLDTFFPFDPCLLKMSSSYISPNFNFWSMVKTTYGEDGDEELCDEVIVN 598

Query: 675 VFPDRIEENLMDDEAMAGSYDYRDFDLDEFDSALNKMSITPRNSLQYQRD-FVQMPSRIR 734
              D  EE   DD+              E DS +N MS TP++S   + +  ++MPSRIR
Sbjct: 676 GDADSAEE--PDDDV-------------ELDSEMNTMSTTPKHSFMRETERLLKMPSRIR 598

Query: 735 PSMSP 739
           PS SP
Sbjct: 736 PSTSP 598

[Close]

BLAST of Cla97C05G081870 vs. TAIR 10
Match: AT2G39240.1 (RNA polymerase I specific transcription initiation factor RRN3 protein )

HSP 1 Score: 368.2 bits (944), Expect = 1.5e-101
Identity = 270/747 (36.14%), Postives = 379/747 (50.74%), Query Frame = 0


Query: 14  DMEDVNLTDAQLIDFVRGFLSSVSLGDNDGYNQLVGVIHHRDRLSPDD------------ 73
           ++E  +L+D  L+  +R  L+S   GD D YN+LV +++ + + S DD            
Sbjct: 5   EVETADLSDKALVSAIREVLASAQSGDTDQYNELVQLMYIKKKKSGDDAMAQPEVPDDVD 64

Query: 74  -VALLVTCLKALSGAVSCIDIVLHESLLAAVSLSLNSESLSRNFVVVMVALSQIFKMSLW 133
            VA   T LK LS +V+C+D V H  L                       L  I    +W
Sbjct: 65  VVAQRETLLKILSHSVACLDDVHHNHL-----------------------LQLILGTRIW 124

Query: 134 DYGPNVMDALIELIISLAVSSGKYVDACLDMLVNNFMPPYSYKDFLKKPHGL-NRKDEVL 193
           D+ PNV+ AL++LIISLA +SGK++ +CLD LV+N            +P  L N+  EVL
Sbjct: 125 DHKPNVIYALLDLIISLATTSGKHLSSCLDTLVSNLR---------SQPRKLDNKMLEVL 184

Query: 194 SRVHTALKDISDLVPLAPLRLEQIVVHKMQRVFFKESLTTI--YVENMLRLEKGA-MSEF 253
           SRVH AL  IS LVPLAP  L  I+   M  V  K  L  +  YV+N+L+LE  + + + 
Sbjct: 185 SRVHAALHKISYLVPLAPSILLPILAQSMPSVHDKARLQVVVPYVKNLLKLENSSIIGKV 244

Query: 254 VGRKILTALVDKLLDLDVEIGWDDILQDDFSKGIFEMELEDDDETTDDINEDSSELPREL 313
           VG+ IL  ++ +  DLD EI  DD LQ+D S  +F+MEL+                    
Sbjct: 245 VGKDILMMVMGRFRDLDSEIECDDNLQNDSSLAMFDMELD-------------------- 304

Query: 314 SRKSLGGNVIAETLDSLIVLTFEHLESCERDGRLNEVHCVFDILLLSFQRTVLTAYKSKF 373
              ++ G ++++ LD L+V +F HL+SC+  GRL+E   VF+ L  SF+  +L   K KF
Sbjct: 305 --VAVEGTLVSKLLDDLMVESFNHLKSCQDAGRLDE---VFENLFESFENLILNTQKLKF 364

Query: 374 AQFVIFYACALDADVCGERFAVSLADMFVSCNDPPLTSVAFLAHLKNLHLHVSNLFYLRG 433
           +QF++FYAC+LD + CG +FA  L + F+S N+  +T                       
Sbjct: 365 SQFLMFYACSLDPENCGVKFASKLLEKFLSSNNNQVT----------------------- 424

Query: 434 LNVLDLRWEESKMSAVSYLASYLSRGKFLSTSLVTTILKRLVDWCLEYGKTVDADPNPKA 493
                      + +AV+YLASYL+R  FLS S V ++LKRLVD C +Y +T + D  P+ 
Sbjct: 425 -----------RTNAVTYLASYLARANFLSASFVASMLKRLVDECADYCRTCNDDARPEV 484

Query: 494 HKVFYSGCQRKYLAYGFDLCDLRIIIFGEGLAYPRLCVLLVSQKLWHTSSLCTRFTFFLM 553
           H+VFYSGC                                                    
Sbjct: 485 HQVFYSGC---------------------------------------------------- 544

Query: 554 IYFPQAIMYVLCFRMRSILEIPRLKSQVLLMPIGPVLTHRLSPLKVCLPSIVEEFLRQAK 613
               QAI+YVLCFRMRSILE+P  +SQ  L P+  VL+H+L PL+VCL S+V EFL QAK
Sbjct: 545 ----QAILYVLCFRMRSILEVPHFQSQ--LTPLESVLSHKLDPLRVCLSSVVSEFLIQAK 573

Query: 614 VANLFTPSETFIFNGLLESEYSKTYGGIERLDMFFPFDPCLLKTCDRYLRPHFVYWSMVR 673
              LF  S+ FIF+ L ESE S+  GG      FFPF P LL+  +  + PHF+  S V+
Sbjct: 605 ACGLFIVSDAFIFDDLSESELSRALGG------FFPF-PWLLEKSNSLISPHFIKRSEVK 573

Query: 674 PTYDEEENGGSSDEDVAEVFPDRIEENLMDDEAMAGSYDYRDFDLDEFDSALNKMSITPR 733
            TY++ E           V+ D   E   DD            D+D  D+ +NKMSITP+
Sbjct: 665 KTYEQAE---------VTVYGDTDNEEDSDD------------DVDP-DNEMNKMSITPK 573

Query: 734 NSLQYQRD-FVQMPSRIRPSMSP-ESL 742
           +S+ ++ +  ++MPSRI PS SP ESL
Sbjct: 725 HSVMHETERLLKMPSRISPSTSPRESL 573

The following BLAST results are available for this feature:

BLAST of Cla97C05G081870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896673.1	0.0e+00	79.35	RNA polymerase I-specific transcription initiation factor RRN3-like [Benincasa h...	[more]
KAA0048966.1	0.0e+00	79.06	RNA polymerase I-specific transcription initiation factor RRN3 [Cucumis melo var...	[more]
XP_038901148.1	0.0e+00	78.54	RNA polymerase I-specific transcription initiation factor RRN3-like [Benincasa h...	[more]
XP_008438040.1	9.0e-306	76.51	PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3 [Cucum...	[more]
XP_023512334.1	7.6e-305	76.42	RNA polymerase I-specific transcription initiation factor RRN3-like isoform X1 [...	[more]

BLAST of Cla97C05G081870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q10110	2.3e-09	23.84	RNA polymerase I-specific transcription initiation factor rrn3 OS=Schizosaccharo...	[more]
P36070	6.2e-07	23.61	RNA polymerase I-specific transcription initiation factor RRN3 OS=Saccharomyces ...	[more]
Q5R4N9	1.8e-06	23.94	RNA polymerase I-specific transcription initiation factor RRN3 OS=Pongo abelii O...	[more]
B2RS91	5.2e-06	23.48	RNA polymerase I-specific transcription initiation factor RRN3 OS=Mus musculus O...	[more]
Q9NYV6	2.6e-05	22.51	RNA polymerase I-specific transcription initiation factor RRN3 OS=Homo sapiens O...	[more]

BLAST of Cla97C05G081870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U3Y2	0.0e+00	79.06	RNA polymerase I-specific transcription initiation factor RRN3 OS=Cucumis melo v...	[more]
A0A1S3AV30	4.3e-306	76.51	RNA polymerase I-specific transcription initiation factor RRN3 OS=Cucumis melo O...	[more]
A0A5D3D051	4.3e-306	76.51	RNA polymerase I-specific transcription initiation factor RRN3 OS=Cucumis melo v...	[more]
A0A0A0L7G6	4.1e-304	76.08	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122360 PE=3 SV=1	[more]
A0A6J1F0A3	9.1e-304	76.28	RNA polymerase I-specific transcription initiation factor RRN3-like isoform X1 O...	[more]

BLAST of Cla97C05G081870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34750.1	9.4e-152	43.79	RNA polymerase I specific transcription initiation factor RRN3 protein	[more]
AT1G30590.1	2.2e-129	41.10	RNA polymerase I specific transcription initiation factor RRN3 protein	[more]
AT2G39240.1	1.5e-101	36.14	RNA polymerase I specific transcription initiation factor RRN3 protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007991	RNA polymerase I specific transcription initiation factor RRN3	PFAM	PF05327	RRN3	coord: 540..656 e-value: 3.8E-27 score: 95.0 coord: 20..488 e-value: 4.9E-73 score: 246.5
IPR007991	RNA polymerase I specific transcription initiation factor RRN3	PANTHER	PTHR12790	TRANSCRIPTION INITIATION FACTOR IA RRN3	coord: 541..731 coord: 15..486

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C05G081870.2	Cla97C05G081870.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006361	transcription initiation from RNA polymerase I promoter
biological_process	GO:0006413	translational initiation
cellular_component	GO:0005634	nucleus
molecular_function	GO:0001042	RNA polymerase I core binding
molecular_function	GO:0001181	RNA polymerase I general transcription initiation factor activity
molecular_function	GO:0003743	translation initiation factor activity