Cla97C05G081340 (gene) Watermelon (97103) v2.5

Overview
NameCla97C05G081340
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionUnknown protein
LocationCla97Chr05: 1107998 .. 1108282 (-)
RNA-Seq ExpressionCla97C05G081340
SyntenyCla97C05G081340
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAATTTCGTTTCCTTGGGAAAGAAAGAGGGAAAATATGGTATTCCATCTCATCGTCATCGTAATGTGCAATGGAACATATCTTGGAAACAGAAGAACGGAAATGATGAAAAAGAAGAAGAAGACAATCACCTTAGAGGCAAGTCGGTGACCGGAGACCTGCCGGAATTCCGATCATCCGATGAGAAAAGATTTATGGAAAATGAGAGAGTGAGACAGAGGAGGAAGAAGAGTGAGTCCTTTGACGGTGGCGGAAAATTGGCTGCAAGGCCTTTCGACTGA

mRNA sequence

ATGGAGAATTTCGTTTCCTTGGGAAAGAAAGAGGGAAAATATGGTATTCCATCTCATCGTCATCGTAATGTGCAATGGAACATATCTTGGAAACAGAAGAACGGAAATGATGAAAAAGAAGAAGAAGACAATCACCTTAGAGGCAAGTCGGTGACCGGAGACCTGCCGGAATTCCGATCATCCGATGAGAAAAGATTTATGGAAAATGAGAGAGTGAGACAGAGGAGGAAGAAGAGTGAGTCCTTTGACGGTGGCGGAAAATTGGCTGCAAGGCCTTTCGACTGA

Coding sequence (CDS)

ATGGAGAATTTCGTTTCCTTGGGAAAGAAAGAGGGAAAATATGGTATTCCATCTCATCGTCATCGTAATGTGCAATGGAACATATCTTGGAAACAGAAGAACGGAAATGATGAAAAAGAAGAAGAAGACAATCACCTTAGAGGCAAGTCGGTGACCGGAGACCTGCCGGAATTCCGATCATCCGATGAGAAAAGATTTATGGAAAATGAGAGAGTGAGACAGAGGAGGAAGAAGAGTGAGTCCTTTGACGGTGGCGGAAAATTGGCTGCAAGGCCTTTCGACTGA

Protein sequence

MENFVSLGKKEGKYGIPSHRHRNVQWNISWKQKNGNDEKEEEDNHLRGKSVTGDLPEFRSSDEKRFMENERVRQRRKKSESFDGGGKLAARPFD
Homology
BLAST of Cla97C05G081340 vs. NCBI nr
Match: KAA0048920.1 (hypothetical protein E6C27_scaffold171G001390 [Cucumis melo var. makuwa] >TYK17648.1 hypothetical protein E5676_scaffold434G005200 [Cucumis melo var. makuwa])

HSP 1 Score: 73.2 bits (178), Expect = 1.4e-09
Identity = 38/51 (74.51%), Postives = 43/51 (84.31%), Query Frame = 0

Query: 38 EKEEEDNHLRGKSVTGDLPEFRSSDEKRFMENERVRQRRKKSESFDGGGKL 89
          E+EE++ HL G+ VTGD PEFRSSDEK+ MEN RVRQRRKKSES DGGG L
Sbjct: 5  EEEEDEYHLIGEPVTGDPPEFRSSDEKKLMENARVRQRRKKSESCDGGGNL 55

BLAST of Cla97C05G081340 vs. NCBI nr
Match: KAE8650240.1 (hypothetical protein Csa_009627, partial [Cucumis sativus])

HSP 1 Score: 65.5 bits (158), Expect = 2.9e-07
Identity = 36/52 (69.23%), Postives = 42/52 (80.77%), Query Frame = 0

Query: 38 EKEEEDNHLRGKSVTGDLPEFRSSDEKRFMENERVRQRRK-KSESFDGGGKL 89
          E+E+++ HLRG+ VT D PEFRSSDEK+ MEN RVRQRRK  SES DGGG L
Sbjct: 5  EEEDDEYHLRGEPVTEDPPEFRSSDEKKLMENARVRQRRKTSSESCDGGGNL 56

BLAST of Cla97C05G081340 vs. ExPASy TrEMBL
Match: A0A5D3D2C8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G005200 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 6.6e-10
Identity = 38/51 (74.51%), Postives = 43/51 (84.31%), Query Frame = 0

Query: 38 EKEEEDNHLRGKSVTGDLPEFRSSDEKRFMENERVRQRRKKSESFDGGGKL 89
          E+EE++ HL G+ VTGD PEFRSSDEK+ MEN RVRQRRKKSES DGGG L
Sbjct: 5  EEEEDEYHLIGEPVTGDPPEFRSSDEKKLMENARVRQRRKKSESCDGGGNL 55

BLAST of Cla97C05G081340 vs. ExPASy TrEMBL
Match: A0A0A0L794 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G120360 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.4e-07
Identity = 36/52 (69.23%), Postives = 42/52 (80.77%), Query Frame = 0

Query: 38 EKEEEDNHLRGKSVTGDLPEFRSSDEKRFMENERVRQRRK-KSESFDGGGKL 89
          E+E+++ HLRG+ VT D PEFRSSDEK+ MEN RVRQRRK  SES DGGG L
Sbjct: 5  EEEDDEYHLRGEPVTEDPPEFRSSDEKKLMENARVRQRRKTSSESCDGGGNL 56

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0048920.11.4e-0974.51hypothetical protein E6C27_scaffold171G001390 [Cucumis melo var. makuwa] >TYK176... [more]
KAE8650240.12.9e-0769.23hypothetical protein Csa_009627, partial [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3D2C86.6e-1074.51Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0L7941.4e-0769.23Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G120360 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..94
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..84

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C05G081340.1Cla97C05G081340.1mRNA