Cla97C05G080620 (gene) Watermelon (97103) v2.5

Overview
NameCla97C05G080620
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionMitochondrial acidic protein MAM33
LocationCla97Chr05: 642477 .. 642951 (-)
RNA-Seq ExpressionCla97C05G080620
SyntenyCla97C05G080620
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGAAGAAAGCGATTGGCGTCACTGCGGACTCGCCGCCGCCGTGGCTCATAGCTACTTACCGCCATTCGACCACTGTGACCTCCGCCGTCAACTCGTTGCACCTCGGATCCCCCAAAGAACACTATCTCGACTCGAGGTCTCCAGAATGCCGACGTCTTCGGTATGATTTCCACTACTTTGCCCTCTGTTTGAATTAGAGTTTTAACTGTATGCAATCGCCAAACCCTAGAATTAGGATTTTAAGCTATGCGAATGTCGTCTGTTCGTCTTACTTGGCTAATTGTTTGTTTATTTATTCTATTATCGCAGAAAGTGAGCTCTCCTTCTCCCTTTTCTTTCATTAAAGGCGCACTAGACGGCAGTCGTCCGGTGGTTACTAGGAACTACGGTGAAGTAGAGGTTTACGTTTCGGTAATGCCATTGGCCAATATTGTTCTGGAAGGTGGTGGAGACGATGGAATTGACCAATAA

mRNA sequence

ATGTTGAAGAAAGCGATTGGCGTCACTGCGGACTCGCCGCCGCCGTGGCTCATAGCTACTTACCGCCATTCGACCACTGTGACCTCCGCCGTCAACTCGTTGCACCTCGGATCCCCCAAAGAACACTATCTCGACTCGAGGTCTCCAGAATGCCGACGTCTTCGGTATGATTTCCACTACTTTGCCCTCTGCGCACTAGACGGCAGTCGTCCGGTGGTTACTAGGAACTACGGTGAAGTAGAGGTTTACGTTTCGGTAATGCCATTGGCCAATATTGTTCTGGAAGGTGGTGGAGACGATGGAATTGACCAATAA

Coding sequence (CDS)

ATGTTGAAGAAAGCGATTGGCGTCACTGCGGACTCGCCGCCGCCGTGGCTCATAGCTACTTACCGCCATTCGACCACTGTGACCTCCGCCGTCAACTCGTTGCACCTCGGATCCCCCAAAGAACACTATCTCGACTCGAGGTCTCCAGAATGCCGACGTCTTCGGTATGATTTCCACTACTTTGCCCTCTGCGCACTAGACGGCAGTCGTCCGGTGGTTACTAGGAACTACGGTGAAGTAGAGGTTTACGTTTCGGTAATGCCATTGGCCAATATTGTTCTGGAAGGTGGTGGAGACGATGGAATTGACCAATAA

Protein sequence

MLKKAIGVTADSPPPWLIATYRHSTTVTSAVNSLHLGSPKEHYLDSRSPECRRLRYDFHYFALCALDGSRPVVTRNYGEVEVYVSVMPLANIVLEGGGDDGIDQ
Homology
BLAST of Cla97C05G080620 vs. NCBI nr
Match: XP_038884404.1 (uncharacterized protein At2g39795, mitochondrial [Benincasa hispida])

HSP 1 Score: 93.2 bits (230), Expect = 1.4e-15
Identity = 60/109 (55.05%), Postives = 73/109 (66.97%), Query Frame = 0

Query: 1   MLKKAIGVTA---DSPPPWLIATYRHSTTVTSAVNSLHLGSPKEHYLD-SRSPECRRLRY 60
           MLKKA+  TA    S  P L+ T RHST+VTSAVNSL L S KEHYL+ SR     ++  
Sbjct: 1   MLKKAMAATAVALRSRRPSLMVTCRHSTSVTSAVNSLLLRSLKEHYLEISRMTPPPKVSP 60

Query: 61  DFHYFAL-CALDGSRPVVTRNYGEVEVYVSVMPLANIVLEGGGDDGIDQ 105
              +  +  ALDG+ PV+TRNYG+ EV +SVM LANIV  GGGDDG D+
Sbjct: 61  PSSFSIIQGALDGNGPVLTRNYGKEEVKISVMRLANIVPGGGGDDGDDE 109

BLAST of Cla97C05G080620 vs. NCBI nr
Match: XP_022992760.1 (uncharacterized protein At2g39795, mitochondrial [Cucurbita maxima])

HSP 1 Score: 88.6 bits (218), Expect = 3.5e-14
Identity = 58/110 (52.73%), Postives = 71/110 (64.55%), Query Frame = 0

Query: 1   MLKKAIGVTA----DSPPPWLIATYRHSTTVTSAVNSLHLGSPKEHYLD-SRSPECRRLR 60
           MLKK   V A     S  P L+AT RHSTTV++AVNSL L S KEHYL+ SR     ++ 
Sbjct: 1   MLKKVTAVAAVALRGSHRPSLMATCRHSTTVSTAVNSLLLRSLKEHYLEISRMTPPPKVS 60

Query: 61  YDFHYFAL-CALDGSRPVVTRNYGEVEVYVSVMPLANIVLEGGGDDGIDQ 105
               +  +  ALDG+ PV+TR+YG  E+ VSVM LANIV  GGGDDG D+
Sbjct: 61  PPSSFSIIKGALDGNGPVLTRSYGNEEINVSVMRLANIVPGGGGDDGDDE 110

BLAST of Cla97C05G080620 vs. NCBI nr
Match: XP_022938797.1 (uncharacterized protein At2g39795, mitochondrial [Cucurbita moschata] >KAG6578831.1 putative protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016357.1 putative protein, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 87.0 bits (214), Expect = 1.0e-13
Identity = 57/110 (51.82%), Postives = 71/110 (64.55%), Query Frame = 0

Query: 1   MLKKAIGVTA----DSPPPWLIATYRHSTTVTSAVNSLHLGSPKEHYLD-SRSPECRRLR 60
           MLKK   V A     S  P L+AT RHST+V++AVNSL L S KEHYL+ SR     ++ 
Sbjct: 1   MLKKVTAVAAVALRGSHRPSLMATCRHSTSVSTAVNSLLLRSLKEHYLEISRMTPPPKVS 60

Query: 61  YDFHYFAL-CALDGSRPVVTRNYGEVEVYVSVMPLANIVLEGGGDDGIDQ 105
               +  +  ALDG+ PV+TR+YG  E+ VSVM LANIV  GGGDDG D+
Sbjct: 61  PPSSFSIIKGALDGNGPVLTRSYGNEEINVSVMRLANIVPGGGGDDGDDE 110

BLAST of Cla97C05G080620 vs. NCBI nr
Match: XP_023549717.1 (uncharacterized protein At2g39795, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 84.0 bits (206), Expect = 8.6e-13
Identity = 56/110 (50.91%), Postives = 70/110 (63.64%), Query Frame = 0

Query: 1   MLKKAIGVTA----DSPPPWLIATYRHSTTVTSAVNSLHLGSPKEHYLD-SRSPECRRLR 60
           MLKK   V A     S  P L+AT R ST+V++AVNSL L S KEHYL+ SR     ++ 
Sbjct: 1   MLKKVTAVAAVALRGSRRPSLMATCRRSTSVSTAVNSLLLRSLKEHYLEISRMTPPPKVS 60

Query: 61  YDFHYFAL-CALDGSRPVVTRNYGEVEVYVSVMPLANIVLEGGGDDGIDQ 105
               +  +  ALDG+ PV+TR+YG  E+ VSVM LANIV  GGGDDG D+
Sbjct: 61  PPSSFSIIKGALDGNGPVLTRSYGNEEINVSVMRLANIVPGGGGDDGDDE 110

BLAST of Cla97C05G080620 vs. NCBI nr
Match: XP_022134253.1 (uncharacterized protein At2g39795, mitochondrial [Momordica charantia])

HSP 1 Score: 80.5 bits (197), Expect = 9.5e-12
Identity = 53/111 (47.75%), Postives = 69/111 (62.16%), Query Frame = 0

Query: 1   MLKKAIGVTADS-----PPPWLIATYRHSTTVTSAVNSLHLGSPKEHYLD-SRSPECRRL 60
           M+KK I V A++      P  +    RHST+V+SAVNSL L S KEHYL+ SR     ++
Sbjct: 1   MMKKLIAVAAEALQSRRRPSLMTTCRRHSTSVSSAVNSLLLRSLKEHYLEISRMTPPPKV 60

Query: 61  RYDFHYFAL-CALDGSRPVVTRNYGEVEVYVSVMPLANIVLEGGGDDGIDQ 105
                +  +  ALD + PV+TRN+GE EV +SVM LANIV  GGGDD  D+
Sbjct: 61  SPPSPFSIIKGALDSNGPVLTRNFGEEEVNISVMRLANIVPGGGGDDDGDE 111

BLAST of Cla97C05G080620 vs. ExPASy TrEMBL
Match: A0A6J1JWM0 (uncharacterized protein At2g39795, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111489000 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.7e-14
Identity = 58/110 (52.73%), Postives = 71/110 (64.55%), Query Frame = 0

Query: 1   MLKKAIGVTA----DSPPPWLIATYRHSTTVTSAVNSLHLGSPKEHYLD-SRSPECRRLR 60
           MLKK   V A     S  P L+AT RHSTTV++AVNSL L S KEHYL+ SR     ++ 
Sbjct: 1   MLKKVTAVAAVALRGSHRPSLMATCRHSTTVSTAVNSLLLRSLKEHYLEISRMTPPPKVS 60

Query: 61  YDFHYFAL-CALDGSRPVVTRNYGEVEVYVSVMPLANIVLEGGGDDGIDQ 105
               +  +  ALDG+ PV+TR+YG  E+ VSVM LANIV  GGGDDG D+
Sbjct: 61  PPSSFSIIKGALDGNGPVLTRSYGNEEINVSVMRLANIVPGGGGDDGDDE 110

BLAST of Cla97C05G080620 vs. ExPASy TrEMBL
Match: A0A6J1FF36 (uncharacterized protein At2g39795, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111444904 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 4.9e-14
Identity = 57/110 (51.82%), Postives = 71/110 (64.55%), Query Frame = 0

Query: 1   MLKKAIGVTA----DSPPPWLIATYRHSTTVTSAVNSLHLGSPKEHYLD-SRSPECRRLR 60
           MLKK   V A     S  P L+AT RHST+V++AVNSL L S KEHYL+ SR     ++ 
Sbjct: 1   MLKKVTAVAAVALRGSHRPSLMATCRHSTSVSTAVNSLLLRSLKEHYLEISRMTPPPKVS 60

Query: 61  YDFHYFAL-CALDGSRPVVTRNYGEVEVYVSVMPLANIVLEGGGDDGIDQ 105
               +  +  ALDG+ PV+TR+YG  E+ VSVM LANIV  GGGDDG D+
Sbjct: 61  PPSSFSIIKGALDGNGPVLTRSYGNEEINVSVMRLANIVPGGGGDDGDDE 110

BLAST of Cla97C05G080620 vs. ExPASy TrEMBL
Match: A0A6J1C1F6 (uncharacterized protein At2g39795, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111006555 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 4.6e-12
Identity = 53/111 (47.75%), Postives = 69/111 (62.16%), Query Frame = 0

Query: 1   MLKKAIGVTADS-----PPPWLIATYRHSTTVTSAVNSLHLGSPKEHYLD-SRSPECRRL 60
           M+KK I V A++      P  +    RHST+V+SAVNSL L S KEHYL+ SR     ++
Sbjct: 1   MMKKLIAVAAEALQSRRRPSLMTTCRRHSTSVSSAVNSLLLRSLKEHYLEISRMTPPPKV 60

Query: 61  RYDFHYFAL-CALDGSRPVVTRNYGEVEVYVSVMPLANIVLEGGGDDGIDQ 105
                +  +  ALD + PV+TRN+GE EV +SVM LANIV  GGGDD  D+
Sbjct: 61  SPPSPFSIIKGALDSNGPVLTRNFGEEEVNISVMRLANIVPGGGGDDDGDE 111

BLAST of Cla97C05G080620 vs. ExPASy TrEMBL
Match: A0A5A7SQG8 (Mitochondrial acidic protein MAM33 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold304G001160 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 2.3e-11
Identity = 50/109 (45.87%), Postives = 66/109 (60.55%), Query Frame = 0

Query: 1   MLKKAIGVTA----DSPPPWLIATYRHSTTVTSAVNSLHLGSPKEHYLD-SRSPECRRLR 60
           ML K +  TA        P L+ T RHST+ +SAVNS  L S KEHYL+ +R P   ++ 
Sbjct: 1   MLNKLMAATAVALRSGSRPSLMVTCRHSTSASSAVNSFLLRSLKEHYLEITRMPAPPKVS 60

Query: 61  YDFHYFALC-ALDGSRPVVTRNYGEVEVYVSVMPLANIVLEGGGDDGID 104
               +  +  ALDG  PV+T+NYG+ EV +SVM L+NIV  GGGD+  D
Sbjct: 61  PPSSFSIITGALDGHGPVLTKNYGKEEVNISVMRLSNIVRGGGGDNDDD 109

BLAST of Cla97C05G080620 vs. ExPASy TrEMBL
Match: A0A1S3C3N7 (uncharacterized protein At2g39795, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103496527 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 2.3e-11
Identity = 50/109 (45.87%), Postives = 66/109 (60.55%), Query Frame = 0

Query: 1   MLKKAIGVTA----DSPPPWLIATYRHSTTVTSAVNSLHLGSPKEHYLD-SRSPECRRLR 60
           ML K +  TA        P L+ T RHST+ +SAVNS  L S KEHYL+ +R P   ++ 
Sbjct: 1   MLNKLMAATAVALRSGSRPSLMVTCRHSTSASSAVNSFLLRSLKEHYLEITRMPAPPKVS 60

Query: 61  YDFHYFALC-ALDGSRPVVTRNYGEVEVYVSVMPLANIVLEGGGDDGID 104
               +  +  ALDG  PV+T+NYG+ EV +SVM L+NIV  GGGD+  D
Sbjct: 61  PPSSFSIITGALDGHGPVLTKNYGKEEVNISVMRLSNIVRGGGGDNDDD 109

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038884404.11.4e-1555.05uncharacterized protein At2g39795, mitochondrial [Benincasa hispida][more]
XP_022992760.13.5e-1452.73uncharacterized protein At2g39795, mitochondrial [Cucurbita maxima][more]
XP_022938797.11.0e-1351.82uncharacterized protein At2g39795, mitochondrial [Cucurbita moschata] >KAG657883... [more]
XP_023549717.18.6e-1350.91uncharacterized protein At2g39795, mitochondrial [Cucurbita pepo subsp. pepo][more]
XP_022134253.19.5e-1247.75uncharacterized protein At2g39795, mitochondrial [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1JWM01.7e-1452.73uncharacterized protein At2g39795, mitochondrial OS=Cucurbita maxima OX=3661 GN=... [more]
A0A6J1FF364.9e-1451.82uncharacterized protein At2g39795, mitochondrial OS=Cucurbita moschata OX=3662 G... [more]
A0A6J1C1F64.6e-1247.75uncharacterized protein At2g39795, mitochondrial OS=Momordica charantia OX=3673 ... [more]
A0A5A7SQG82.3e-1145.87Mitochondrial acidic protein MAM33 isoform X1 OS=Cucumis melo var. makuwa OX=119... [more]
A0A1S3C3N72.3e-1145.87uncharacterized protein At2g39795, mitochondrial OS=Cucumis melo OX=3656 GN=LOC1... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C05G080620.2Cla97C05G080620.2mRNA