Cla97C04G078600 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C04G078600
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	mitochondrial import receptor subunit TOM5 homolog
Location	Cla97Chr04: 26087489 .. 26089758 (+)
RNA-Seq Expression	Cla97C04G078600
Synteny	Cla97C04G078600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGCTCCACACAGTCCGGGTCTACAAGCCGATTCATCGCGGCTTCAACCAAACCCCCAAACCTAAAACCCTAACGCCTCATACGCCTTCTCTCTCTGTAGTCCGCGCGAAAATGGCTGATGCTCCGAGTTCGGTGAAGAAGGTGAAGAATCTTCTCTTTTCCGGAACTGCAAATTCGGTGGAGACTGTGAAATCCTTTTTCAATTCTCAGGTTTATGACGAAGAAAAGTGGGCCTTGAACATGGTACTCTTCCGATCCTTTAAATTTCAATTCAAAATCTATGTCTTTCTTCTTAGCCTGGAATTTTCGATCTCCCAAAATGTTCTAAGTGTGGTTTCTAGGATTGGGCAACGTCCGTTCTATCGTTTATATTGCATTATTAAGGCCTTCCGCTCTGCGCTCTGTTTGGTAGCTGAGATTTTTTTTTCATTTACGGCAACGGAATATAAAGTGTCGATCCTTTGATGGAAATGTGCATTTTTTAGTCTGACACGAGTAGATTTAAGTCGTACTCGATTCTGTTAAGCGTTATTACTGTTTTGAAATTGAAGAAATTTCAGGAGGAGATGTAAGTTTTCTCCGAGATCTGTCTTGCTAGAGAATATTTGGTCATCTTAAATTCAATAACTTGTTGGATGGGCTATTTGTGAAGTTGTATGTGTTTAGAGCAGTTAGCAGTCTCTTCACTTTATCTAAATTTGTTACGTTTTCCTTCTGGTTTGACACCTTGCCTTGTTGTCTCAAACTGTGATTATCATTCTTTTTCTCACTTTTGAAATTCCGTAATAGAGGGGGAAAAAAAAGGAATCTTTTGGTTTTCGGTAATTACAAACGAGTGGTGGGTTTTCCTCTGTTTAGCACTTGTTTATTGGTTTGTTGAAGCTGGGAAGATTAAAGGGAAAATTGAACGTAATGGATTTGGGTTGGTTCTCTAAACCATCTTATTTAAATTGATGTTTTAACTTAAGCCATGGCCCTCACAATCTTACCTGAACAAGATCTGTTCTATAGGTTGTACAACTATGTCCTTCTAAGAACACAAGAACCAAAGTTTGGCGGATGAACTGCTAATTAAACTGCCAATGGGCCTTGGTCCGGCAGCTGCAGAGGATCGTTCTTGGTAGGCTAACAACCTGCTGGGATGGTTGCAAGGCGATCTGACTTAAGCCATGGCCCTTAGCCTTTTTAGCCGATTTACACCTTATTTTGATCATTAGAGGCTTACTCCTGCATGATAATGCACCAAGGCTACAATTATTTACACGTCTTGTGTGATGATTAAAAGAATGAAATTAATTTGCTCAAGTCTTAAAGAATATAAAGGTTCCCTTGTGTATGGAATGCCAATACGTGAGTTGTAGCAAATGATTAAAAACATTGAAGGCGAAAAAAAAAAGTTCAATCCTGATAGTAGTGGTGATGTTAAGGATGATATTTTAGAACTTTCAATTAAGTGGGCAGGGGTGTTCATATATATATTATATACACATTTCTATATAACTATTATATGTATGTTGCAACACTTAATGGATCATACAATCCTAGGATTTGTATAATTCTTTTTTTTAATTAAATTTGAAACTTGCACCTATACCACCTTGAGGCCCATTCATGGCTCTTCGAGAGGAAAGGCCTCAAGTCTACCTTTAGCTTTTTATACTATTGATTCGATGTTAATAATTTGCAGAAAGCTCTATGATATGTTCTGTCTTTGTGAGTATGCGGTAATAGTTGCCAATGCATCATAACTATCTCATCTCTTGTGTCATTTGTTCCTATTGAACCTGAAACATAAAACTAAACATGATGGGAGTTTTTCCATTTCCAATAAGCATCATAGCTTTTCATCAAAAAGTAAGCATCACAGCTGTCTCTGCAGGTATATGTGGACTTTGAATGCATGAAAAGAAAGAATGCTCTGGCATTAGGAAGAGGGATGAATGTCATCGAATTGGGTTGTAGTTGTAACAGAGCTACTTTACTGCCTTAATTCATTATTTGGGACTTGGGAAAATATTGCTTAACTAAGATTTTGTAGAGGAAAGTCATGCTTATGCAAATTCTTTTTTGCAATAAACATTCACTTCTAAACAAAAGTATCTTTTTTTGTTTGTCTTTGAATATACCAACATTTCCTTGCTATGGCTGTATTTTATAAATAGAACTGAATCTCTCCTTTGTTGTTGTAGAAATTGCTTCGTGCTGCTGGGATGTTTGCAGGATCCATCCTTCTCATGCGGAATTATGGTGATCTGATGACAATATGA

mRNA sequence

ATGTTGCTCCACACAGTCCGGGTCTACAAGCCGATTCATCGCGGCTTCAACCAAACCCCCAAACCTAAAACCCTAACGCCTCATACGCCTTCTCTCTCTGTAGTCCGCGCGAAAATGGCTGATGCTCCGAGTTCGGTGAAGAAGGTGAAGAATCTTCTCTTTTCCGGAACTGCAAATTCGGTGGAGACTGTGAAATCCTTTTTCAATTCTCAGGTTTATGACGAAGAAAAGTGGGCCTTGAACATGAAATTGCTTCGTGCTGCTGGGATGTTTGCAGGATCCATCCTTCTCATGCGGAATTATGGTGATCTGATGACAATATGA

Coding sequence (CDS)

ATGTTGCTCCACACAGTCCGGGTCTACAAGCCGATTCATCGCGGCTTCAACCAAACCCCCAAACCTAAAACCCTAACGCCTCATACGCCTTCTCTCTCTGTAGTCCGCGCGAAAATGGCTGATGCTCCGAGTTCGGTGAAGAAGGTGAAGAATCTTCTCTTTTCCGGAACTGCAAATTCGGTGGAGACTGTGAAATCCTTTTTCAATTCTCAGGTTTATGACGAAGAAAAGTGGGCCTTGAACATGAAATTGCTTCGTGCTGCTGGGATGTTTGCAGGATCCATCCTTCTCATGCGGAATTATGGTGATCTGATGACAATATGA

Protein sequence

MLLHTVRVYKPIHRGFNQTPKPKTLTPHTPSLSVVRAKMADAPSSVKKVKNLLFSGTANSVETVKSFFNSQVYDEEKWALNMKLLRAAGMFAGSILLMRNYGDLMTI

Homology

[Close]

BLAST of Cla97C04G078600 vs. NCBI nr
Match: XP_004137442.1 (mitochondrial import receptor subunit TOM5 homolog [Cucumis sativus] >XP_008451171.1 PREDICTED: mitochondrial import receptor subunit TOM5 homolog [Cucumis melo] >TYJ98941.1 mitochondrial import receptor subunit TOM5-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 130.2 bits (326), Expect = 1.1e-26
Identity = 67/69 (97.10%), Postives = 67/69 (97.10%), Query Frame = 0


Query: 39  MADAPSSVKKVKNLLFSGTANSVETVKSFFNSQVYDEEKWALNMKLLRAAGMFAGSILLM 98
           MAD  SSVKKVKNLLFSGTANSVETVKSFFNSQVYDEEKWALNMKLLRAAGMFAGSILLM
Sbjct: 1   MADDSSSVKKVKNLLFSGTANSVETVKSFFNSQVYDEEKWALNMKLLRAAGMFAGSILLM 60

Query: 99  RNYGDLMTI 108
           RNYGDLMTI
Sbjct: 61  RNYGDLMTI 69

[Close]

BLAST of Cla97C04G078600 vs. NCBI nr
Match: XP_038894051.1 (mitochondrial import receptor subunit TOM5 homolog [Benincasa hispida])

HSP 1 Score: 129.0 bits (323), Expect = 2.4e-26
Identity = 66/69 (95.65%), Postives = 66/69 (95.65%), Query Frame = 0


Query: 39  MADAPSSVKKVKNLLFSGTANSVETVKSFFNSQVYDEEKWALNMKLLRAAGMFAGSILLM 98
           MADA SSV KVKN LFSGTANSVETVKSFFNSQVYDEEKWALNMKLLRAAGMFAGSILLM
Sbjct: 1   MADASSSVNKVKNFLFSGTANSVETVKSFFNSQVYDEEKWALNMKLLRAAGMFAGSILLM 60

Query: 99  RNYGDLMTI 108
           RNYGDLMTI
Sbjct: 61  RNYGDLMTI 69

[Close]

BLAST of Cla97C04G078600 vs. NCBI nr
Match: KAG6572899.1 (Mitochondrial import receptor subunit TOM5-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012088.1 Mitochondrial import receptor subunit TOM5-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 124.8 bits (312), Expect = 4.5e-25
Identity = 63/69 (91.30%), Postives = 65/69 (94.20%), Query Frame = 0


Query: 39  MADAPSSVKKVKNLLFSGTANSVETVKSFFNSQVYDEEKWALNMKLLRAAGMFAGSILLM 98
           M DA SSVKKVKN +FSGTANSVETVKSFFNSQV+DEEKWALNMKLLRAAGMFAGSILLM
Sbjct: 1   MGDASSSVKKVKNFIFSGTANSVETVKSFFNSQVHDEEKWALNMKLLRAAGMFAGSILLM 60

Query: 99  RNYGDLMTI 108
           RNYGDLM I
Sbjct: 61  RNYGDLMAI 69

[Close]

BLAST of Cla97C04G078600 vs. NCBI nr
Match: XP_022924183.1 (mitochondrial import receptor subunit TOM5 homolog [Cucurbita moschata] >XP_023001126.1 mitochondrial import receptor subunit TOM5 homolog [Cucurbita maxima] >XP_023520288.1 mitochondrial import receptor subunit TOM5 homolog [Cucurbita pepo subsp. pepo] >KAG6584406.1 Mitochondrial import receptor subunit TOM5-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019992.1 Mitochondrial import receptor subunit TOM5-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 124.4 bits (311), Expect = 5.9e-25
Identity = 63/69 (91.30%), Postives = 65/69 (94.20%), Query Frame = 0


Query: 39  MADAPSSVKKVKNLLFSGTANSVETVKSFFNSQVYDEEKWALNMKLLRAAGMFAGSILLM 98
           M DA SSVKKVKN LFSGTANSVETVKSF+NSQV+DEEKWALNMKLLRAAGMFAGSILLM
Sbjct: 1   MVDASSSVKKVKNFLFSGTANSVETVKSFYNSQVHDEEKWALNMKLLRAAGMFAGSILLM 60

Query: 99  RNYGDLMTI 108
           RNYGDLM I
Sbjct: 61  RNYGDLMAI 69

[Close]

BLAST of Cla97C04G078600 vs. NCBI nr
Match: XP_022137624.1 (mitochondrial import receptor subunit TOM5 homolog [Momordica charantia])

HSP 1 Score: 117.1 bits (292), Expect = 9.4e-23
Identity = 58/69 (84.06%), Postives = 64/69 (92.75%), Query Frame = 0


Query: 39  MADAPSSVKKVKNLLFSGTANSVETVKSFFNSQVYDEEKWALNMKLLRAAGMFAGSILLM 98
           MADA SS+KKVKN + SGT+NSVETV+SF NSQ++DEEKWALNMKLLRAAGMFAGSILLM
Sbjct: 1   MADASSSMKKVKNFICSGTSNSVETVRSFLNSQIHDEEKWALNMKLLRAAGMFAGSILLM 60

Query: 99  RNYGDLMTI 108
           RNYGDLM I
Sbjct: 61  RNYGDLMAI 69

[Close]

BLAST of Cla97C04G078600 vs. ExPASy Swiss-Prot
Match: Q9SD80 (Mitochondrial import receptor subunit TOM5 homolog OS=Arabidopsis thaliana OX=3702 GN=TOM5 PE=1 SV=3)

HSP 1 Score: 70.9 bits (172), Expect = 1.0e-11
Identity = 30/48 (62.50%), Postives = 43/48 (89.58%), Query Frame = 0


Query: 60  SVETVKSFFNSQVYDEEKWALNMKLLRAAGMFAGSILLMRNYGDLMTI 108
           S+E +K+ ++S+V+DE+KWA+NMKLLRA GMFAG ++LMR+YGDLM +
Sbjct: 7   SIEKMKALWHSEVHDEQKWAVNMKLLRALGMFAGGVVLMRSYGDLMGV 54

[Close]

BLAST of Cla97C04G078600 vs. ExPASy TrEMBL
Match: A0A5D3BJP0 (Mitochondrial import receptor subunit TOM5-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G001420 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 5.2e-27
Identity = 67/69 (97.10%), Postives = 67/69 (97.10%), Query Frame = 0


Query: 39  MADAPSSVKKVKNLLFSGTANSVETVKSFFNSQVYDEEKWALNMKLLRAAGMFAGSILLM 98
           MAD  SSVKKVKNLLFSGTANSVETVKSFFNSQVYDEEKWALNMKLLRAAGMFAGSILLM
Sbjct: 1   MADDSSSVKKVKNLLFSGTANSVETVKSFFNSQVYDEEKWALNMKLLRAAGMFAGSILLM 60

Query: 99  RNYGDLMTI 108
           RNYGDLMTI
Sbjct: 61  RNYGDLMTI 69

[Close]

BLAST of Cla97C04G078600 vs. ExPASy TrEMBL
Match: A0A0A0LSV3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G039240 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 5.2e-27
Identity = 67/69 (97.10%), Postives = 67/69 (97.10%), Query Frame = 0


Query: 39  MADAPSSVKKVKNLLFSGTANSVETVKSFFNSQVYDEEKWALNMKLLRAAGMFAGSILLM 98
           MAD  SSVKKVKNLLFSGTANSVETVKSFFNSQVYDEEKWALNMKLLRAAGMFAGSILLM
Sbjct: 1   MADDSSSVKKVKNLLFSGTANSVETVKSFFNSQVYDEEKWALNMKLLRAAGMFAGSILLM 60

Query: 99  RNYGDLMTI 108
           RNYGDLMTI
Sbjct: 61  RNYGDLMTI 69

[Close]

BLAST of Cla97C04G078600 vs. ExPASy TrEMBL
Match: A0A1S3BQV4 (mitochondrial import receptor subunit TOM5 homolog OS=Cucumis melo OX=3656 GN=LOC103492520 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 5.2e-27
Identity = 67/69 (97.10%), Postives = 67/69 (97.10%), Query Frame = 0


Query: 39  MADAPSSVKKVKNLLFSGTANSVETVKSFFNSQVYDEEKWALNMKLLRAAGMFAGSILLM 98
           MAD  SSVKKVKNLLFSGTANSVETVKSFFNSQVYDEEKWALNMKLLRAAGMFAGSILLM
Sbjct: 1   MADDSSSVKKVKNLLFSGTANSVETVKSFFNSQVYDEEKWALNMKLLRAAGMFAGSILLM 60

Query: 99  RNYGDLMTI 108
           RNYGDLMTI
Sbjct: 61  RNYGDLMTI 69

[Close]

BLAST of Cla97C04G078600 vs. ExPASy TrEMBL
Match: A0A6J1KHR6 (mitochondrial import receptor subunit TOM5 homolog OS=Cucurbita maxima OX=3661 GN=LOC111495362 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 2.9e-25
Identity = 63/69 (91.30%), Postives = 65/69 (94.20%), Query Frame = 0


Query: 39  MADAPSSVKKVKNLLFSGTANSVETVKSFFNSQVYDEEKWALNMKLLRAAGMFAGSILLM 98
           M DA SSVKKVKN LFSGTANSVETVKSF+NSQV+DEEKWALNMKLLRAAGMFAGSILLM
Sbjct: 1   MVDASSSVKKVKNFLFSGTANSVETVKSFYNSQVHDEEKWALNMKLLRAAGMFAGSILLM 60

Query: 99  RNYGDLMTI 108
           RNYGDLM I
Sbjct: 61  RNYGDLMAI 69

[Close]

BLAST of Cla97C04G078600 vs. ExPASy TrEMBL
Match: A0A6J1EBN7 (mitochondrial import receptor subunit TOM5 homolog OS=Cucurbita moschata OX=3662 GN=LOC111431705 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 2.9e-25
Identity = 63/69 (91.30%), Postives = 65/69 (94.20%), Query Frame = 0


Query: 39  MADAPSSVKKVKNLLFSGTANSVETVKSFFNSQVYDEEKWALNMKLLRAAGMFAGSILLM 98
           M DA SSVKKVKN LFSGTANSVETVKSF+NSQV+DEEKWALNMKLLRAAGMFAGSILLM
Sbjct: 1   MVDASSSVKKVKNFLFSGTANSVETVKSFYNSQVHDEEKWALNMKLLRAAGMFAGSILLM 60

Query: 99  RNYGDLMTI 108
           RNYGDLM I
Sbjct: 61  RNYGDLMAI 69

[Close]

BLAST of Cla97C04G078600 vs. TAIR 10
Match: AT5G08040.1 (mitochondrial import receptor subunit TOM5 homolog )

HSP 1 Score: 70.9 bits (172), Expect = 7.2e-13
Identity = 30/48 (62.50%), Postives = 43/48 (89.58%), Query Frame = 0


Query: 60  SVETVKSFFNSQVYDEEKWALNMKLLRAAGMFAGSILLMRNYGDLMTI 108
           S+E +K+ ++S+V+DE+KWA+NMKLLRA GMFAG ++LMR+YGDLM +
Sbjct: 7   SIEKMKALWHSEVHDEQKWAVNMKLLRALGMFAGGVVLMRSYGDLMGV 54

The following BLAST results are available for this feature:

BLAST of Cla97C04G078600 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137442.1	1.1e-26	97.10	mitochondrial import receptor subunit TOM5 homolog [Cucumis sativus] >XP_0084511...	[more]
XP_038894051.1	2.4e-26	95.65	mitochondrial import receptor subunit TOM5 homolog [Benincasa hispida]	[more]
KAG6572899.1	4.5e-25	91.30	Mitochondrial import receptor subunit TOM5-like protein, partial [Cucurbita argy...	[more]
XP_022924183.1	5.9e-25	91.30	mitochondrial import receptor subunit TOM5 homolog [Cucurbita moschata] >XP_0230...	[more]
XP_022137624.1	9.4e-23	84.06	mitochondrial import receptor subunit TOM5 homolog [Momordica charantia]	[more]

BLAST of Cla97C04G078600 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SD80	1.0e-11	62.50	Mitochondrial import receptor subunit TOM5 homolog OS=Arabidopsis thaliana OX=37...	[more]

BLAST of Cla97C04G078600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BJP0	5.2e-27	97.10	Mitochondrial import receptor subunit TOM5-like protein OS=Cucumis melo var. mak...	[more]
A0A0A0LSV3	5.2e-27	97.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G039240 PE=4 SV=1	[more]
A0A1S3BQV4	5.2e-27	97.10	mitochondrial import receptor subunit TOM5 homolog OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A6J1KHR6	2.9e-25	91.30	mitochondrial import receptor subunit TOM5 homolog OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1EBN7	2.9e-25	91.30	mitochondrial import receptor subunit TOM5 homolog OS=Cucurbita moschata OX=3662...	[more]

BLAST of Cla97C04G078600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G08040.1	7.2e-13	62.50	mitochondrial import receptor subunit TOM5 homolog	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37251:SF1	MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM5 HOMOLOG	coord: 57..107
IPR034553	Mitochondrial import receptor subunit TOM5 homologue, viridiplantae	PANTHER	PTHR37251	MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM5 HOMOLOG	coord: 57..107

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C04G078600.1	Cla97C04G078600.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005742	mitochondrial outer membrane translocase complex