Cla97C04G069850 (gene) Watermelon (97103) v2.5

Overview
NameCla97C04G069850
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionSWIB domain-containing protein
LocationCla97Chr04: 7409153 .. 7415718 (+)
RNA-Seq ExpressionCla97C04G069850
SyntenyCla97C04G069850
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGATGGGCATTACAGATAACCCAAAGAAGCTTGCCAACTTGATTGATCTTGTTAACCTTCCTTCAACTCTCAGGGAGTTTGTGGGACAGTCCCAAGTTTCTCGTCTGGGATGTTTCAAGTGTGTGTGGTCGTATATCAAAACCAACAATCTTCAGGTTCTTTTTTGTCTTATTTTTATGGGTTTTTTTGTTATCTGCTTTAGATACATATTGATTATGCCGCTATCGACCTGACAGAGACCTCCCTTGTTTAATCTACTTTCAAAATATTTGATGTAGATTCTACGTTTTATGCTGGTGAAAGTATAGATTAAAATGGGGAACAGGGTAGGAGAAGAAAGCCCATAAGTTTAAAGACCCAGGATGAAAAAGAATCTCCTTAAGTGAAAGTTATGAGAAACTGATGGAGGGTCAAGGTCCAAGACAAAATACAGTTAATAAAACCATGTCTTTTCAACGAAATCGTATAGACTGAGAATGAGGTTACAAAGAGAGTCTGATAAAGCCCAACCAGAACTTGGAGGATATTGAAACGTAAAAGATAAACAGCTACAAAATAATTCTAAGTATTCGAGGTACAAGTACCTCCCTGCCTCGAGTATACGCACTCAAGCCTACACCATCTCAACAATTCTCTACTTTCATCCTTTAGCACTCACCCTATTTATGACATCCCCCAACAGTATGCTCTAATAATGTTCCCAACTACTCCCGTCACATTCCTATCCAAGAAGAGATGCTATTGACATTTCTTCAACCATAGGGTCACGTAAGCTTGATTGGCTTACTTTCTTTTTTTTTGTAATATCTGTGAGTGTCCGAGTCAACTTATGTACATCTTGACAAATCTCACTAGATAATCCGCTTGATCCTACAACATTTGGAGGTCAAGAAAACTCGTAGGATATTAAATTTTAAGTAGATGACCACTATGGATTGAACTCATCTCCTCTAAGCCTTTATCAAACTCAATGTCCTTTATTTACTGCTAGGTCAACCATGATGGTTGATTGGCTTACTACTAATACCAACTAACATATATTTTTTCTTATTAAATAAGACCAGAAATTCCTTCAAAAATCTATAAAGTCCTATTATGACTCCCAAAGGCATCTCCTTATGCATAAGGGGAAATAGTATTATAACCCATAAATGAGTTACATGGATGATCTTTGTCCGTCCCAGCAAGCAACCCTTCTACTAAGCCTTTATCCATGCCTCTCAAAATAAGTCTGTTAAGCACATCCACAACCACCCCAAAAGAGAATGATGCTTGATTTTACTTGTAAATTCAATAGCTTTTGGTCTTTGCACTAGTTTGCGGTACACTTTATGACTGTTCCAATGCTATATGATATTATCTTCGGAAGCTGAAAGTACTCGAAACTTTAATGAAGGAGCATTTTTTTTCTTTTCCAAGTGTTATAAATATGTTTCTGCAAACCCATAAGTGGCTTTCTTTATTCTGATAAAAGGTTATGGATGTGTATATTTCTTGCTTAGGATCCGACGAACAAGAATGTGGTCATTTGTGATGATAAGTTAAAGAGTATATTGCTAGGTAAGCCGAAGGTTGAGCTAGCTGAACTTCCTGCACTGATTAAATTACATTTTCCCAAAAACCCCAAGTGAGTTGTGCTTGCTGTTCAACCTCTGGCACCTCGACAATGGCGTCTTCATGTTGCCAATGTTCGGAATGTTTAGCTTCAATTTTGTGTAAGTGTCCTACTAGGTTTCTTCTCCATATATTATCAGAAAGTTATATGACTTCTGCATAGAACATTTATTCAGCAATAGTGTCGGTTTAACTCTCTTTTTGTGCCTCATGGCCTACTGTATATTATATTGGCTTCACTTGACATTGTATCGTTTTTTAATTTTCGTGCATTGTTCTCAATTAACATGGAGTTTATTGGAATTTTTGTACAAATATGATGGAACTTTAACAGAAGTTCAAACTTGATTCAAAACTTTTAGAATGGAAACAGAAGAGAGGCTACAAAGTGAGTGAGGCGAAACATAATGAAACAATGTTCATCTAATCTTTGCTTCCTATCCATCATATCGTTTCACTCATTTGCAGTCCCTTCGTTGTTCCCTCTCACTAGTTCTCTCTATTACATTTTGTTAGGAACCAAAGTAGTATGAGCTACCTTTGTCCCACATTGATAAGAATGGGATGACCAATGTGGTACTTGAGTGTCTTGACTCTCCCACCTCCATAGGTTGCTTTTGAGATGTAGTTCTCCAAGATGCTCAATTACCTAACACATTTCAACTGCCAAAATCAAATGGAATTGAACTTACCATATTTTAAAATTACTTTTGGTTTTGTTTTAGAAAACTAAGGAATGAGTTGATAGGTATGGTTCAAATCAATTAAATGAACACAATTTGTTCAACTTTTGCTACAAATAATGTTTGATACGATTGTGTTCTGCTATGTTGTCTTCATAAGGCAAGTTTTTTTTATATCTTTTTAAGTGGTCTTTTATCATTAGGAAGCCACCATATATCATCTTCTCTTGGCCATCAAATCCCATAGTCAAGAAAGATCCGATGTTCATCTTCAAATATTGTGATTCCAGGGGCCAATCTCCCAAGTTATGTTCTTGAATTTTCATGTTTTTGTGTAAATTTAATTAACACTGACGAAATTGCCAGTTTGTCATTGTACTATTGATTATAATTCAATGTTTACCTTGTTAGTTAAAACAGAGATGTGAGAAAGAGTCATAATGAGTAGAAGAGAAGTAAGAAAACTGGGAAGAGAGAGTTAAGCGAAGTGAGAGACATAGAGAGAGAGAGTGACGAGAGAAGGAATTAATATTAAATCAATATATTTTTCCTCTCATCAATACATAATCACCAATCTAACCCTCCATGTCATTTTTTTTCTTAGTCAACTTACAGTCTAAGTACCATTTAGAACTACTAGTTTGATACTATGTTCAGTGCATGTAAAGTTTAAAAATAGAACTTAACTATAATTTTTTATGATAAGCCTCTTAATTTTAAAGATTAAATTTAAATCAACATATTTTTCTAATTTTTTTCATTTATTTAGATTGGATAATTTGATTATTCTCTTAATTTTAGACTTTAATTACTTAATTTTAAACTTTAATTTAAACCAAGTATCGTTTTTTTTTTTTTGGTGATAATCTCATCTATATTATATGTTTTTTAAAATTAATGTGGGTGATGTGGTTATCCTTTTAATTTATAAAATAAAATATTATTTTTCTATTTTGTATAAAATTTCATAATAATTATTTCTCAGTATTTGATTATGTTCTAATTTCATTTTTTTTAAAATCCTAAACAAAAATATATATTTTTTTTATGTAAATAGAAACCTTAAAAACTTAATATATTTTGATTTGCAAACACTTCTTCTTGATTTTAAACTTTATTTCAAATTTTTCCAAAAAGTGAAAAGAGAACAAATGTACAAAATTATATAAAAATTAGTAAATATTATTATAAATCTCTAAACTCATTGGTGTATATTTGCATAAATTAAAAAGTGAAAACAAAACTACAAAAGTACAAAATAGTCTATCACTTTTCTATCACTTTGAAGATTTCTAACTTTAGGAAATTGCTATTTCTAACCTAAATTTTTTTTTTTATGGGACAAAACTAACCATTTTTTAAAAACTTCTTTTTTTTAACTTCTTTTTTCAAATTTTAAGAGTTTCAGAGGTGGGTCCCACATGGTGAAATGACGTTAATACTCAAAAACCATCTTTCTCAACACTCAAACCATCGTCTTCTTCCCTAACCCCTAAGACCATCTTCTTCCCTAGAGTTCATTTTTTTTTTTTTACAGTACTATCTAATTTCTGTCATTTGTGGTAAAATTTCATCCTATGCGACCTAATTTTTGGAAACAAACCCACAAAGAACATGTTTAAAACGGTGGAAGTAAATTTAGGTTTTTGAATAGTTGGCGGTAAAAAACAGAAAAGAAAATTAATTTTTCTAGTAGAGGAGGTTTAATATGTGTAGAAAATATTGAAATCGGATAGAAAAAGAATTTGGTATGCGTTTTTTGCTTGCTGTCATTTTTCTCGTAAGTTGAATGAGTTTACGGGAAAAGTGATAGAATGCCTAAATCTCATGAGTACACGCTAACTTTCGGGACATTTGAGCATTCTGTGACTGTTCCCGTAAGGTCTTGTTAGAAACCTTACCGGAAAAGTCACAGAATGTTCAAATTTCTCGAAAGGTTTGAACCTGTGACTATCGCATCTCGCTAGTCTCACTCTCTCTATCGTTGGTCTGCCTCTCGCTTGTTTCGCTCTCTCTGATGTCGACTCGATAGTCTTGCTCTCGCTAGTCTAAGTTTGTTTTTCCCGTAAGGTTTCTAACAGACCAGCGAGAGCGAGACTAGTGAAAGCAAGACTAATGAGACGATACCAAAGAGCGAGACGAGCGAGGGCAAGACTAGTGAGAGCGAGACTAGTGAGACGATAGTCACATGTTCAAACCTTTTAGGAAATTTGGGCATTCTGTGACTTTTCCCGTAAGTTTTTTTTCTCGTAAGGTTTCTAGCAATACCTTACGGGAAAAGTCATAGAATACCCAAATGTCCTGAAAGTTGGCGTGTACTCATGAGATTTGGGCATTCTATCACTTTTCCCGTAAACTCATTCAACTTATAGGAAAAATGAACTTACGGAAAAAATGACAACAAGCAAAAAACACATCAAATTCTTTTTCTATCCGATTTCAGATATTTCCTATACATATTAAACCTCTTCTACCAGAAAAACTAATTTTCTTTTCCGTTTTTTTACCACCAACTATTCTAAATTTCTTAAACCTCAAAAGTAAGGTCTTCGTATCCACCATATTCAATATTTGAGGCGTGTATAAAAAAACTACAAAAAGATTTAAAGAAAATATTAAATGAAAAAGTAAAAAAGTGAAAAAATGGGGGAAAAAACATACGTTAAATGAACAGAGAAAGGTGACATCTTCTTTAAGATCTAGAAGAGATAGGTGAAAAAAAATAAATAAAAAATAAGAAGAAGAAGAAAAGAGAAGAAGAAAAGAAACATTAAAAGGATTTGTTACTAACGAAATAAAAAGAATATATATATATACCAAATACAACAAAATTTCTAAAAAAAGAAAAAATAAATAAAAACAAAGAAGTTGGAAGAGTAAAAAAAAAAAAAGTAAAGGAGACGAGGCATCTGATGAAAAAATAGGTTGAAGTTAGTTATTTATTGATAATTAAGATTTCAAATCGTAATTTAATTTAATTTTTAATTAAATTATATTAACAGATGATAACATGATTTTTTTTTTTATAAAATGTGATTTTTTTTTCAGAAAAAACATAATTTCCTCTAGAAATTATATTCTAAAATGTTATTATTATTTTTTTTTTTTAAAGAAACTCACATTTTAATAAAAAGAACATAAAAATATGAAATTTTTTAGGATTTTAAAATCTAAAGGTTGTTTTTCATGTATATGAGTTTTTTTTTCAATTAAATCAAATCATGTTAATAATATCGAATCTCATGATATATTTTATATTTTTAAAAATCTTAAAAAATTGATGAGACAAAATGTGCCGAACTTTCTAAGACTTGAACTAGGCCGTTACTACATGTATGCATACAAATTGAACGACTCTTTTTATAAATTAACTAAAACCAAAAGAGTTCAATACAGTAAATAACTTTTATAAAATCTATATAACTAAAAATCTTTGATCGGGTACCCTAAAATCATATAAAAAAAAAATTAGAGATTTTTGTAAAATGTCTAATAGTGCAAAAACTAGAGTTCTGAATTTAAATATCAAGACAGTAATTAAAACATGAAAACTATGCTTAAGCTATTTCTGGTCTCATGGCTCTATCACAGATTTTTCTTGTCATGCGCCGGTGCATCTGCTACGTTAGGGATTTCAATCCTACATTTCCTATGTGTTCACTTGAAATTTGACCATTCTGAACTATTTCTTTCACAACTAGAAACTTTATTTCTACATGCTTTGACTTTGTATTGCTTTTGTTGTGGTTGGAATATATCACTATCGACTTATTGTCACCAAATAACTCTGCATTGAGGACAGTTATGTGTTGAAGTCGATGCGTCGAAGACAGACATGTGTGGAGTCACCCTACGTTGAAGACAGAATGGTCTTGACTCGACGAAAGTAGTATTGAATGACGGAAAGGTATGCGTAAAAAATTAGGAGGCGTTGAGGACAACAACATGCGTTGGGTGTGGTCAGTTGCTGGAGGCGTTGGAAGAGAGTTAACTTGAGTGCCTCGCGTTGAGATAAGAACCCTGTGCTAGTCTACGGGTGAAGGGTAAGTCGGCAACATAAGTCCTAGTGTTTGTAAAGGCTAAGTCGGTAGTATATATAGCTGGATTAATTAAATGTTTAATCATTTTTAAGACATTTCGAGAGCTTAAGTCGGTTCCATATTTCAGACAAACTTCAGAAGAAGATTGAAGAAGGTGTTCTTGCGGATTTTGGACGAAATTTGACTCATGTTGATGTTGAAAATGAAGCTGGAACAGAGGAATGA

mRNA sequence

ATGAAGATGGGCATTACAGATAACCCAAAGAAGCTTGCCAACTTGATTGATCTTGTTAACCTTCCTTCAACTCTCAGGGAGTTTGTGGGACAGTCCCAAGTTTCTCGTCTGGGATGTTTCAAGTGTGTGTGGTCGTATATCAAAACCAACAATCTTCAGGATCCGACGAACAAGAATGTGGTCATTTGTGATGATAAGTTAAAGAGTATATTGCTAGGTAAGCCGAAGGTTGAGCTAGCTGAACTTCCTGCACTGATTAAATTACATTTTCCCAAAAACCCCAAAATGCCTAAATCTCATGAGTACACGCTAACTTTCGGGACATTTGAGCATTCTGTGACTGTTCCCACCAGCGAGAGCGAGACTAGTGAAAGCAAGACTAATGAGACGATACCAAAGAGCGAGACGAGCGAGGGCAAGACTAGTGAGAGCGAGACTAACAAACTTCAGAAGAAGATTGAAGAAGGTGTTCTTGCGGATTTTGGACGAAATTTGACTCATGTTGATGTTGAAAATGAAGCTGGAACAGAGGAATGA

Coding sequence (CDS)

ATGAAGATGGGCATTACAGATAACCCAAAGAAGCTTGCCAACTTGATTGATCTTGTTAACCTTCCTTCAACTCTCAGGGAGTTTGTGGGACAGTCCCAAGTTTCTCGTCTGGGATGTTTCAAGTGTGTGTGGTCGTATATCAAAACCAACAATCTTCAGGATCCGACGAACAAGAATGTGGTCATTTGTGATGATAAGTTAAAGAGTATATTGCTAGGTAAGCCGAAGGTTGAGCTAGCTGAACTTCCTGCACTGATTAAATTACATTTTCCCAAAAACCCCAAAATGCCTAAATCTCATGAGTACACGCTAACTTTCGGGACATTTGAGCATTCTGTGACTGTTCCCACCAGCGAGAGCGAGACTAGTGAAAGCAAGACTAATGAGACGATACCAAAGAGCGAGACGAGCGAGGGCAAGACTAGTGAGAGCGAGACTAACAAACTTCAGAAGAAGATTGAAGAAGGTGTTCTTGCGGATTTTGGACGAAATTTGACTCATGTTGATGTTGAAAATGAAGCTGGAACAGAGGAATGA

Protein sequence

MKMGITDNPKKLANLIDLVNLPSTLREFVGQSQVSRLGCFKCVWSYIKTNNLQDPTNKNVVICDDKLKSILLGKPKVELAELPALIKLHFPKNPKMPKSHEYTLTFGTFEHSVTVPTSESETSESKTNETIPKSETSEGKTSESETNKLQKKIEEGVLADFGRNLTHVDVENEAGTEE
Homology
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BLAST of Cla97C04G069850 vs. NCBI nr
Match: XP_038882021.1 (upstream activation factor subunit spp27 [Benincasa hispida])

HSP 1 Score: 192.6 bits (488), Expect = 2.9e-45
Identity = 92/95 (96.84%), Postives = 94/95 (98.95%), Query Frame = 0 

Query: 1   MKMGITDNPKKLANLIDLVNLPSTLREFVGQSQVSRLGCFKCVWSYIKTNNLQDPTNKNV 60
           MKM ITDNPKKLANLIDLVNLPSTLREFVGQSQ+SRLGCFKCVWSYIKTNNLQDPTNKNV
Sbjct: 6   MKMAITDNPKKLANLIDLVNLPSTLREFVGQSQISRLGCFKCVWSYIKTNNLQDPTNKNV 65

Query: 61  VICDDKLKSILLGKPKVELAELPALIKLHFPKNPK 96
           VICD+KLKSILLGKPKVELAELPALIKLHFPKNPK
Sbjct: 66  VICDEKLKSILLGKPKVELAELPALIKLHFPKNPK 100

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BLAST of Cla97C04G069850 vs. NCBI nr
Match: XP_008449303.1 (PREDICTED: upstream activation factor subunit spp27 [Cucumis melo] >XP_008449304.1 PREDICTED: upstream activation factor subunit spp27 [Cucumis melo] >XP_008449305.1 PREDICTED: upstream activation factor subunit spp27 [Cucumis melo])

HSP 1 Score: 191.0 bits (484), Expect = 8.5e-45
Identity = 90/95 (94.74%), Postives = 94/95 (98.95%), Query Frame = 0 

Query: 1   MKMGITDNPKKLANLIDLVNLPSTLREFVGQSQVSRLGCFKCVWSYIKTNNLQDPTNKNV 60
           MKM +TDNPKKLANLIDLVNLPSTLREFVGQSQ+SRLGCFKCVWSYIKTNNLQDPTNKNV
Sbjct: 6   MKMAMTDNPKKLANLIDLVNLPSTLREFVGQSQISRLGCFKCVWSYIKTNNLQDPTNKNV 65

Query: 61  VICDDKLKSILLGKPKVELAELPALIKLHFPKNPK 96
           V+CD+KLKSILLGKPKVELAELPALIKLHFPKNPK
Sbjct: 66  VVCDEKLKSILLGKPKVELAELPALIKLHFPKNPK 100

[Close]
BLAST of Cla97C04G069850 vs. NCBI nr
Match: XP_031739586.1 (upstream activation factor subunit spp27 [Cucumis sativus] >XP_031739587.1 upstream activation factor subunit spp27 [Cucumis sativus] >XP_031739588.1 upstream activation factor subunit spp27 [Cucumis sativus])

HSP 1 Score: 187.6 bits (475), Expect = 9.5e-44
Identity = 90/95 (94.74%), Postives = 92/95 (96.84%), Query Frame = 0 

Query: 1   MKMGITDNPKKLANLIDLVNLPSTLREFVGQSQVSRLGCFKCVWSYIKTNNLQDPTNKNV 60
           MKM ITDNPKKLANLIDLVNLPSTLREFVG SQ+SRLGCFKCVWSYIKTNNLQDPTNKNV
Sbjct: 6   MKMAITDNPKKLANLIDLVNLPSTLREFVGHSQISRLGCFKCVWSYIKTNNLQDPTNKNV 65

Query: 61  VICDDKLKSILLGKPKVELAELPALIKLHFPKNPK 96
           VICD+KLKSILLGKPKVELAELPALIKLHFPKN K
Sbjct: 66  VICDEKLKSILLGKPKVELAELPALIKLHFPKNSK 100

[Close]
BLAST of Cla97C04G069850 vs. NCBI nr
Match: KGN55149.2 (hypothetical protein Csa_012337 [Cucumis sativus])

HSP 1 Score: 187.6 bits (475), Expect = 9.5e-44
Identity = 90/95 (94.74%), Postives = 92/95 (96.84%), Query Frame = 0 

Query: 1   MKMGITDNPKKLANLIDLVNLPSTLREFVGQSQVSRLGCFKCVWSYIKTNNLQDPTNKNV 60
           MKM ITDNPKKLANLIDLVNLPSTLREFVG SQ+SRLGCFKCVWSYIKTNNLQDPTNKNV
Sbjct: 95  MKMAITDNPKKLANLIDLVNLPSTLREFVGHSQISRLGCFKCVWSYIKTNNLQDPTNKNV 154

Query: 61  VICDDKLKSILLGKPKVELAELPALIKLHFPKNPK 96
           VICD+KLKSILLGKPKVELAELPALIKLHFPKN K
Sbjct: 155 VICDEKLKSILLGKPKVELAELPALIKLHFPKNSK 189

[Close]
BLAST of Cla97C04G069850 vs. NCBI nr
Match: XP_022928748.1 (upstream activation factor subunit UAF30 [Cucurbita moschata] >XP_022928749.1 upstream activation factor subunit UAF30 [Cucurbita moschata])

HSP 1 Score: 182.6 bits (462), Expect = 3.0e-42
Identity = 88/95 (92.63%), Postives = 91/95 (95.79%), Query Frame = 0 

Query: 1   MKMGITDNPKKLANLIDLVNLPSTLREFVGQSQVSRLGCFKCVWSYIKTNNLQDPTNKNV 60
           MK  ITDNPKKLANLIDLVNLPSTLREFVGQSQ+SRLGCFK VWSYIKTNNLQDPTNKNV
Sbjct: 6   MKTAITDNPKKLANLIDLVNLPSTLREFVGQSQISRLGCFKYVWSYIKTNNLQDPTNKNV 65

Query: 61  VICDDKLKSILLGKPKVELAELPALIKLHFPKNPK 96
           VICD+KLKSILLGK K+ELAELPALIKLHFPKNPK
Sbjct: 66  VICDEKLKSILLGKSKIELAELPALIKLHFPKNPK 100

[Close]
BLAST of Cla97C04G069850 vs. ExPASy Swiss-Prot
Match: O74503 (Upstream activation factor subunit spp27 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=spp27 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 8.7e-08
Identity = 25/52 (48.08%), Postives = 35/52 (67.31%), Query Frame = 0 

Query: 19  VNLPSTLREFVGQSQVSRLGCFKCVWSYIKTNNLQDPTNKNVVICDDKLKSI 71
           + L   L EF+G  Q+SR    K +W YIK ++LQDP +K  ++CDDKLKS+
Sbjct: 121 MKLSPKLAEFLGLEQLSRPQTVKKLWEYIKAHDLQDPNDKRTILCDDKLKSV 172

[Close]
BLAST of Cla97C04G069850 vs. ExPASy Swiss-Prot
Match: Q08747 (Upstream activation factor subunit UAF30 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=UAF30 PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.1e-06
Identity = 25/78 (32.05%), Postives = 48/78 (61.54%), Query Frame = 0 

Query: 19  VNLPSTLREFVGQSQVSRLGCFKCVWSYIKTNNLQDPTNKNVVICDDKLKSILLGKPKVE 78
           V L  +L   +G+ +++R    + +W+YIK +NLQ+P NK  ++CD+KL+ ++LGK    
Sbjct: 124 VTLSKSLASLLGEHELTRTEVVRRLWAYIKAHNLQNPNNKKEILCDEKLE-LILGK-STN 183

Query: 79  LAELPALIKLHFPKNPKM 97
           + E+  ++  H  +  K+
Sbjct: 184 MFEMHKILASHMTEPKKI 199

[Close]
BLAST of Cla97C04G069850 vs. ExPASy Swiss-Prot
Match: Q05024 (Protein TRI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TRI1 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.1e-05
Identity = 29/95 (30.53%), Postives = 53/95 (55.79%), Query Frame = 0 

Query: 7   DNPKKLANLIDLVNLPSTLREFVGQSQVSRLGCFKCVWSYIKTNNLQDPTNKNVVICDDK 66
           D+P   +  +  V L + L++F+G  ++ R    K +W YIK ++LQ+P ++  ++CD+K
Sbjct: 112 DSPDSNSISVRKVLLSAPLQKFLGSEELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEK 171

Query: 67  LKSILLGKPKVELAELPALIKLHFPKNPKMPKSHE 102
           ++ I  GK K+ +  +  L+  H   NP     HE
Sbjct: 172 MEPI-FGK-KMTMFSMNKLLTKHL-FNPDEIVKHE 203

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BLAST of Cla97C04G069850 vs. ExPASy TrEMBL
Match: A0A1S3BL41 (upstream activation factor subunit spp27 OS=Cucumis melo OX=3656 GN=LOC103491221 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 4.1e-45
Identity = 90/95 (94.74%), Postives = 94/95 (98.95%), Query Frame = 0 

Query: 1   MKMGITDNPKKLANLIDLVNLPSTLREFVGQSQVSRLGCFKCVWSYIKTNNLQDPTNKNV 60
           MKM +TDNPKKLANLIDLVNLPSTLREFVGQSQ+SRLGCFKCVWSYIKTNNLQDPTNKNV
Sbjct: 6   MKMAMTDNPKKLANLIDLVNLPSTLREFVGQSQISRLGCFKCVWSYIKTNNLQDPTNKNV 65

Query: 61  VICDDKLKSILLGKPKVELAELPALIKLHFPKNPK 96
           V+CD+KLKSILLGKPKVELAELPALIKLHFPKNPK
Sbjct: 66  VVCDEKLKSILLGKPKVELAELPALIKLHFPKNPK 100

[Close]
BLAST of Cla97C04G069850 vs. ExPASy TrEMBL
Match: A0A0A0L2E1 (SWIB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G493210 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 4.6e-44
Identity = 90/95 (94.74%), Postives = 92/95 (96.84%), Query Frame = 0 

Query: 1   MKMGITDNPKKLANLIDLVNLPSTLREFVGQSQVSRLGCFKCVWSYIKTNNLQDPTNKNV 60
           MKM ITDNPKKLANLIDLVNLPSTLREFVG SQ+SRLGCFKCVWSYIKTNNLQDPTNKNV
Sbjct: 98  MKMAITDNPKKLANLIDLVNLPSTLREFVGHSQISRLGCFKCVWSYIKTNNLQDPTNKNV 157

Query: 61  VICDDKLKSILLGKPKVELAELPALIKLHFPKNPK 96
           VICD+KLKSILLGKPKVELAELPALIKLHFPKN K
Sbjct: 158 VICDEKLKSILLGKPKVELAELPALIKLHFPKNSK 192

[Close]
BLAST of Cla97C04G069850 vs. ExPASy TrEMBL
Match: A0A6J1ELR1 (upstream activation factor subunit UAF30 OS=Cucurbita moschata OX=3662 GN=LOC111435564 PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 1.5e-42
Identity = 88/95 (92.63%), Postives = 91/95 (95.79%), Query Frame = 0 

Query: 1   MKMGITDNPKKLANLIDLVNLPSTLREFVGQSQVSRLGCFKCVWSYIKTNNLQDPTNKNV 60
           MK  ITDNPKKLANLIDLVNLPSTLREFVGQSQ+SRLGCFK VWSYIKTNNLQDPTNKNV
Sbjct: 6   MKTAITDNPKKLANLIDLVNLPSTLREFVGQSQISRLGCFKYVWSYIKTNNLQDPTNKNV 65

Query: 61  VICDDKLKSILLGKPKVELAELPALIKLHFPKNPK 96
           VICD+KLKSILLGK K+ELAELPALIKLHFPKNPK
Sbjct: 66  VICDEKLKSILLGKSKIELAELPALIKLHFPKNPK 100

[Close]
BLAST of Cla97C04G069850 vs. ExPASy TrEMBL
Match: A0A6J1HY33 (upstream activation factor subunit UAF30 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111467287 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.5e-42
Identity = 88/95 (92.63%), Postives = 91/95 (95.79%), Query Frame = 0 

Query: 1   MKMGITDNPKKLANLIDLVNLPSTLREFVGQSQVSRLGCFKCVWSYIKTNNLQDPTNKNV 60
           MK  ITDNPKKLANLIDLVNLPSTLREFVGQSQ+SRLGCFK VWSYIKTNNLQDPTNKNV
Sbjct: 6   MKTAITDNPKKLANLIDLVNLPSTLREFVGQSQISRLGCFKYVWSYIKTNNLQDPTNKNV 65

Query: 61  VICDDKLKSILLGKPKVELAELPALIKLHFPKNPK 96
           VICD+KL+SILLGK KVELAELPALIKLHFPKNPK
Sbjct: 66  VICDEKLRSILLGKSKVELAELPALIKLHFPKNPK 100

[Close]
BLAST of Cla97C04G069850 vs. ExPASy TrEMBL
Match: A0A6J1HWJ0 (protein TRI1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467287 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.5e-42
Identity = 88/95 (92.63%), Postives = 91/95 (95.79%), Query Frame = 0 

Query: 1   MKMGITDNPKKLANLIDLVNLPSTLREFVGQSQVSRLGCFKCVWSYIKTNNLQDPTNKNV 60
           MK  ITDNPKKLANLIDLVNLPSTLREFVGQSQ+SRLGCFK VWSYIKTNNLQDPTNKNV
Sbjct: 61  MKTAITDNPKKLANLIDLVNLPSTLREFVGQSQISRLGCFKYVWSYIKTNNLQDPTNKNV 120

Query: 61  VICDDKLKSILLGKPKVELAELPALIKLHFPKNPK 96
           VICD+KL+SILLGK KVELAELPALIKLHFPKNPK
Sbjct: 121 VICDEKLRSILLGKSKVELAELPALIKLHFPKNPK 155

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BLAST of Cla97C04G069850 vs. TAIR 10
Match: AT4G26810.1 (SWIB/MDM2 domain superfamily protein )

HSP 1 Score: 162.9 bits (411), Expect = 2.3e-40
Identity = 78/95 (82.11%), Postives = 84/95 (88.42%), Query Frame = 0 

Query: 1   MKMGITDNPKKLANLIDLVNLPSTLREFVGQSQVSRLGCFKCVWSYIKTNNLQDPTNKNV 60
           +K  ITDNPKKL NLIDLVNLPSTLR FVGQSQ+SRLGCF  VWSYIKTNNLQDP NKNV
Sbjct: 6   LKKAITDNPKKLGNLIDLVNLPSTLRNFVGQSQISRLGCFMRVWSYIKTNNLQDPKNKNV 65

Query: 61  VICDDKLKSILLGKPKVELAELPALIKLHFPKNPK 96
           VICD+KLKSILLGK +VEL +LP+LIKLHFPK  K
Sbjct: 66  VICDEKLKSILLGKQRVELVDLPSLIKLHFPKEQK 100

[Close]
BLAST of Cla97C04G069850 vs. TAIR 10
Match: AT4G26810.2 (SWIB/MDM2 domain superfamily protein )

HSP 1 Score: 162.9 bits (411), Expect = 2.3e-40
Identity = 78/95 (82.11%), Postives = 84/95 (88.42%), Query Frame = 0 

Query: 1   MKMGITDNPKKLANLIDLVNLPSTLREFVGQSQVSRLGCFKCVWSYIKTNNLQDPTNKNV 60
           +K  ITDNPKKL NLIDLVNLPSTLR FVGQSQ+SRLGCF  VWSYIKTNNLQDP NKNV
Sbjct: 6   LKKAITDNPKKLGNLIDLVNLPSTLRNFVGQSQISRLGCFMRVWSYIKTNNLQDPKNKNV 65

Query: 61  VICDDKLKSILLGKPKVELAELPALIKLHFPKNPK 96
           VICD+KLKSILLGK +VEL +LP+LIKLHFPK  K
Sbjct: 66  VICDEKLKSILLGKQRVELVDLPSLIKLHFPKEQK 100

[Close]
BLAST of Cla97C04G069850 vs. TAIR 10
Match: AT2G35605.1 (SWIB/MDM2 domain superfamily protein )

HSP 1 Score: 77.4 bits (189), Expect = 1.3e-14
Identity = 33/79 (41.77%), Postives = 51/79 (64.56%), Query Frame = 0 

Query: 15  LIDLVNLPSTLREFVGQSQVSRLGCFKCVWSYIKTNNLQDPTNKNVVICDDKLKSILLGK 74
           ++ +V +   L  F+G+++VSR    K +W YIK NNLQ+P NK  ++CD++LK+I  GK
Sbjct: 30  ILKVVPVSKPLANFIGENEVSRTTAVKKIWEYIKLNNLQNPVNKREILCDEQLKTIFSGK 89

Query: 75  PKVELAELPALIKLHFPKN 94
             V   E+  L+  HFPK+
Sbjct: 90  DTVGFLEISKLLSQHFPKS 108

[Close]
BLAST of Cla97C04G069850 vs. TAIR 10
Match: AT1G31760.1 (SWIB/MDM2 domain superfamily protein )

HSP 1 Score: 72.0 bits (175), Expect = 5.4e-13
Identity = 32/69 (46.38%), Postives = 45/69 (65.22%), Query Frame = 0 

Query: 25  LREFVGQSQVSRLGCFKCVWSYIKTNNLQDPTNKNVVICDDKLKSILLGKPKVELAELPA 84
           L  F G+ +++R    K VW Y+K +NLQ+P NK  + CDDKLK+I  GK KV + E+  
Sbjct: 43  LASFAGERELTRGSALKKVWEYVKLHNLQNPANKKEIHCDDKLKTIFDGKDKVGITEIMK 102

Query: 85  LIKLHFPKN 94
           L+  HFPK+
Sbjct: 103 LLSPHFPKS 111

[Close]
BLAST of Cla97C04G069850 vs. TAIR 10
Match: AT3G03590.1 (SWIB/MDM2 domain superfamily protein )

HSP 1 Score: 63.9 bits (154), Expect = 1.5e-10
Identity = 31/91 (34.07%), Postives = 50/91 (54.95%), Query Frame = 0 

Query: 6   TDNPKK----LANLIDLVNLPSTLREFVGQSQVSRLGCFKCVWSYIKTNNLQDPTNKNVV 65
           +D+P K       +  +  +   L +F+G  + SR    K +W+YIK+++LQ+P +K  +
Sbjct: 51  SDSPAKKTPRSTGIFKVTPVSPVLAQFLGTGETSRTDAIKGIWTYIKSHDLQNPADKREI 110

Query: 66  ICDDKLKSILLGKPKVELAELPALIKLHFPK 93
            CD+ LK I  GK KV   E+  L+  HF K
Sbjct: 111 FCDETLKLIFEGKDKVGFLEISKLLSPHFVK 141

The following BLAST results are available for this feature:
BLAST of Cla97C04G069850 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038882021.12.9e-4596.84upstream activation factor subunit spp27 [Benincasa hispida][more]
XP_008449303.18.5e-4594.74PREDICTED: upstream activation factor subunit spp27 [Cucumis melo] >XP_008449304... [more]
XP_031739586.19.5e-4494.74upstream activation factor subunit spp27 [Cucumis sativus] >XP_031739587.1 upstr... [more]
KGN55149.29.5e-4494.74hypothetical protein Csa_012337 [Cucumis sativus][more]
XP_022928748.13.0e-4292.63upstream activation factor subunit UAF30 [Cucurbita moschata] >XP_022928749.1 up... [more]
BLAST of Cla97C04G069850 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O745038.7e-0848.08Upstream activation factor subunit spp27 OS=Schizosaccharomyces pombe (strain 97... [more]
Q087472.1e-0632.05Upstream activation factor subunit UAF30 OS=Saccharomyces cerevisiae (strain ATC... [more]
Q050241.1e-0530.53Protein TRI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 ... [more]
BLAST of Cla97C04G069850 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BL414.1e-4594.74upstream activation factor subunit spp27 OS=Cucumis melo OX=3656 GN=LOC103491221... [more]
A0A0A0L2E14.6e-4494.74SWIB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G493210 PE=4 S... [more]
A0A6J1ELR11.5e-4292.63upstream activation factor subunit UAF30 OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
A0A6J1HY332.5e-4292.63upstream activation factor subunit UAF30 isoform X2 OS=Cucurbita maxima OX=3661 ... [more]
A0A6J1HWJ02.5e-4292.63protein TRI1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467287 PE=4 SV=1[more]
BLAST of Cla97C04G069850 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G26810.12.3e-4082.11SWIB/MDM2 domain superfamily protein [more]
AT4G26810.22.3e-4082.11SWIB/MDM2 domain superfamily protein [more]
AT2G35605.11.3e-1441.77SWIB/MDM2 domain superfamily protein [more]
AT1G31760.15.4e-1346.38SWIB/MDM2 domain superfamily protein [more]
AT3G03590.11.5e-1034.07SWIB/MDM2 domain superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019835SWIB domainSMARTSM00151swib_2coord: 15..95
e-value: 1.0E-11
score: 55.0
IPR036885SWIB/MDM2 domain superfamilyGENE3D1.10.245.10SWIB/MDM2 domaincoord: 13..100
e-value: 4.2E-21
score: 76.7
IPR036885SWIB/MDM2 domain superfamilySUPERFAMILY47592SWIB/MDM2 domaincoord: 8..96
IPR003121SWIB/MDM2 domainPFAMPF02201SWIBcoord: 19..90
e-value: 4.1E-22
score: 77.8
IPR003121SWIB/MDM2 domainPROSITEPS51925SWIB_MDM2coord: 14..92
score: 18.315004
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 113..153
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 126..153
NoneNo IPR availablePANTHERPTHR13844SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY Dcoord: 1..98
NoneNo IPR availablePANTHERPTHR13844:SF45OS09G0133000 PROTEINcoord: 1..98
NoneNo IPR availableCDDcd10567SWIB-MDM2_likecoord: 19..90
e-value: 5.9875E-23
score: 84.9025

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C04G069850.2Cla97C04G069850.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005634 nucleus