Cla97C03G067770 (gene) Watermelon (97103) v2.5

Overview
NameCla97C03G067770
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionER membrane protein complex subunit 6
LocationCla97Chr03: 31133913 .. 31135886 (+)
RNA-Seq ExpressionCla97C03G067770
SyntenyCla97C03G067770
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTTTAACACTTTAGTTCTTTCTCCTACACTGTTCTTTTTCTGGGTTCTCCCCTCTCCATTTATACCACTCCCGCACATCACCATCAACTCCCTTCTCCCTCTCCGTCGCTGCCATTATCGGTCGCCGGCTCTCTCCCATTTTCTGTTTCCTGGTATTTAACTTCAGATCATACGGCGGCTGAAGTTATGGCGGGATACTCCTCCGCTGTTTCTGAGAAGAAATCGTCTGATGCGGCCGACGATTTACCGATCTTCAATGCTGAAAATTTGCAAAACAACTTGAAGATAATATATTACAGGTTTTTCGATGCTTCAGCGAATTTTACTTGCTTGCTGATACCAATTATCTTTTATTTCCTTCTGTATCGAAAGTAGTAGAATCCTATAAATTTTCTTAAGAGTCGGAATCCTTCCGTGACAGACCTTTTCTTTTTCTAGTTCTATTCTCTTAATTACCTGCTTATGTAGCTGTAGATTTAATTGGTTGACCTAAAATTTTAATGGATCCCGAGCACTGTGCGACGGACAATGATACGATTCAATTTCTCGGGATTGTTTGCATTCAAATTGAGTCGCTACAAAATTGGACCCAAGATGATTTTTATTGATTATCATGATTTTTTTTTTCTTTTGAGTTTTGTGAATTTAGATCGTAAACTTCAATTATCTTTTGCAGCCGGACGTTTTTGTCTATAATTGGTGGAGTAATTGCTGGAATTTTGGGATTCACTGGCCTGACTGGATTTATATTTTATTTCCTAGTCATGGCAATTACTTCACTTGCACTTGCAACCAAGGCTGGATTTTCCTCTCATTCATATTTTGAAAGCTGGAACCAGATTCTACTCGATGGCTTTCTGAGTGGGCTTATGGTATGCAGCCTCTGCCCTTATTTTTTAGATTGGACAAAATTACAAGCATAATAGAGAGGAAATAGGAGAATTGAATTATTTTTTTTACTTGAAACTGACTTCTGTTGAGTTCTTTTGTATTAAAAAATAATTTGAATTTTCAGCTCTAATGCTTTGAGGGTTTATAAGTTACCAACCCTTTCTTGTTAATTGCATCCGTTTCTTCTGTATTTACTATTTAGAAGAAATTAGTAAGAACTGGTATTTTCACCCACTTCACTCTCCTGCTTCTACTCCTGGAATATATAAGTTTGGAATCAAAGGAGAAGGCAGGTCATAGTACTTCTTCAATATTATTGTGCTGGAGGCAAGTCGAGAAAAAGTGCGAGACGAGGGAAGGTGCAATTCTAAGTTGAATGTTCTTTTAACCACCTCGGGATCCCCTTTAGGATGATTTCTTATCCTCCTGGCTAGGCTTTCATACACTGTTGATTTTTATACAATCTTCACATCTCCTATTAAGGAAAATATAGGAAAATGCAATTCGAATGAGGGTTTACTGAGCATAAGAACTAATGTAGATTTTGAAGAAAGAAAGGATTGTAGTTTAAGGTTATTTTGAAAATTTTGTCCAAGTATGAGATATCTTGGACCATTGGTGATCGAAAATTTAAATCTAAATGGATAATTAAAATCGGATAACAATTTGAGTTCCTTTGTGATACCGATGGGGAAAGGGCATATAAAATAGACGAACAACTTGATTTTAGGAAATGGTCCATCTGAGATGTGGAAATATTAAGGGTTCACTGTACACTTGCAGCAGGATAGAGGTCTCTAGAGCCTTGGGATCAGATTGGTTTCCAATTCTCACAGTGAAACTTGAATGGCCTGAGGAACTGAGTTGGATAAAACTGGAAAAAAAGGGAATAAATCCCGTTCCTCCCATAATCCAATGGGCAACTTGGCTTTATTTCAAGATTGTGCTAATAAGCAATGATTTGATGAAGGTTTCAGGGAATTCTATGATAGGGGTGGTTTACAGGATGTATTCTGCTATTCAAATTTGCTTAATACCTAACAAGTATGGGGCTACGGAACTTTCAGAATTCAGAGTATAG

mRNA sequence

TTTTTTAACACTTTAGTTCTTTCTCCTACACTGTTCTTTTTCTGGGTTCTCCCCTCTCCATTTATACCACTCCCGCACATCACCATCAACTCCCTTCTCCCTCTCCGTCGCTGCCATTATCGGTCGCCGGCTCTCTCCCATTTTCTGTTTCCTGGTATTTAACTTCAGATCATACGGCGGCTGAAGTTATGGCGGGATACTCCTCCGCTGTTTCTGAGAAGAAATCGTCTGATGCGGCCGACGATTTACCGATCTTCAATGCTGAAAATTTGCAAAACAACTTGAAGATAATATATTACAGCCGGACGTTTTTGTCTATAATTGGTGGAGTAATTGCTGGAATTTTGGGATTCACTGGCCTGACTGGATTTATATTTTATTTCCTAGTCATGGCAATTACTTCACTTGCACTTGCAACCAAGGCTGGATTTTCCTCTCATTCATATTTTGAAAGCTGGAACCAGATTCTACTCGATGGCTTTCTGAGTGGGCTTATGGAAAATATAGGAAAATGCAATTCGAATGAGGGTTTACTGAGCATAAGAACTAATGTAGATTTTGAAGAAAGAAAGGATTGTAGTTTAAGCAGGATAGAGGTCTCTAGAGCCTTGGGATCAGATTGGTTTCCAATTCTCACAGTGAAACTTGAATGGCCTGAGGAACTGAGTTGGATAAAACTGGAAAAAAAGGGAATAAATCCCGTTCCTCCCATAATCCAATGGGCAACTTGGCTTTATTTCAAGATTGTGCTAATAAGCAATGATTTGATGAAGGTTTCAGGGAATTCTATGATAGGGGTGGTTTACAGGATGTATTCTGCTATTCAAATTTGCTTAATACCTAACAAGTATGGGGCTACGGAACTTTCAGAATTCAGAGTATAG

Coding sequence (CDS)

ATGGCGGGATACTCCTCCGCTGTTTCTGAGAAGAAATCGTCTGATGCGGCCGACGATTTACCGATCTTCAATGCTGAAAATTTGCAAAACAACTTGAAGATAATATATTACAGCCGGACGTTTTTGTCTATAATTGGTGGAGTAATTGCTGGAATTTTGGGATTCACTGGCCTGACTGGATTTATATTTTATTTCCTAGTCATGGCAATTACTTCACTTGCACTTGCAACCAAGGCTGGATTTTCCTCTCATTCATATTTTGAAAGCTGGAACCAGATTCTACTCGATGGCTTTCTGAGTGGGCTTATGGAAAATATAGGAAAATGCAATTCGAATGAGGGTTTACTGAGCATAAGAACTAATGTAGATTTTGAAGAAAGAAAGGATTGTAGTTTAAGCAGGATAGAGGTCTCTAGAGCCTTGGGATCAGATTGGTTTCCAATTCTCACAGTGAAACTTGAATGGCCTGAGGAACTGAGTTGGATAAAACTGGAAAAAAAGGGAATAAATCCCGTTCCTCCCATAATCCAATGGGCAACTTGGCTTTATTTCAAGATTGTGCTAATAAGCAATGATTTGATGAAGGTTTCAGGGAATTCTATGATAGGGGTGGTTTACAGGATGTATTCTGCTATTCAAATTTGCTTAATACCTAACAAGTATGGGGCTACGGAACTTTCAGAATTCAGAGTATAG

Protein sequence

MAGYSSAVSEKKSSDAADDLPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSLALATKAGFSSHSYFESWNQILLDGFLSGLMENIGKCNSNEGLLSIRTNVDFEERKDCSLSRIEVSRALGSDWFPILTVKLEWPEELSWIKLEKKGINPVPPIIQWATWLYFKIVLISNDLMKVSGNSMIGVVYRMYSAIQICLIPNKYGATELSEFRV
Homology
[Close]
BLAST of Cla97C03G067770 vs. NCBI nr
Match: XP_038880512.1 (ER membrane protein complex subunit 6 [Benincasa hispida])

HSP 1 Score: 183.7 bits (465), Expect = 1.8e-42
Identity = 96/102 (94.12%), Postives = 97/102 (95.10%), Query Frame = 0 

Query: 2   AGYSSAVSEKKSSDAADDLPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGF 61
           AGYSS  SEKKSSDAADDLPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGL GF
Sbjct: 91  AGYSSTTSEKKSSDAADDLPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLNGF 150

Query: 62  IFYFLVMAITSLALATKAGFSSHSYFESWNQILLDGFLSGLM 104
           IFYF+VMAITSLALATKAGFS  SYFESWNQILLDGFLSGLM
Sbjct: 151 IFYFIVMAITSLALATKAGFSFRSYFESWNQILLDGFLSGLM 192

[Close]
BLAST of Cla97C03G067770 vs. NCBI nr
Match: XP_022137968.1 (ER membrane protein complex subunit 6 [Momordica charantia] >XP_022137969.1 ER membrane protein complex subunit 6 [Momordica charantia])

HSP 1 Score: 183.3 bits (464), Expect = 2.3e-42
Identity = 95/103 (92.23%), Postives = 98/103 (95.15%), Query Frame = 0 

Query: 1   MAGYSSAVSEKKSSDAADDLPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG 60
           MAGYSSA SEKKS++AADD+PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG
Sbjct: 1   MAGYSSAASEKKSTEAADDVPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG 60

Query: 61  FIFYFLVMAITSLALATKAGFSSHSYFESWNQILLDGFLSGLM 104
           FI YFLVMAITSL LA KAGFS HSYFESWNQILLDGFLSGLM
Sbjct: 61  FILYFLVMAITSLGLAAKAGFSFHSYFESWNQILLDGFLSGLM 103

[Close]
BLAST of Cla97C03G067770 vs. NCBI nr
Match: XP_022972030.1 (ER membrane protein complex subunit 6 [Cucurbita maxima] >XP_022972031.1 ER membrane protein complex subunit 6 [Cucurbita maxima] >XP_023539991.1 ER membrane protein complex subunit 6 [Cucurbita pepo subsp. pepo] >XP_023539992.1 ER membrane protein complex subunit 6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 180.3 bits (456), Expect = 2.0e-41
Identity = 94/103 (91.26%), Postives = 95/103 (92.23%), Query Frame = 0 

Query: 1   MAGYSSAVSEKKSSDAADDLPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG 60
           MAGYSS  SEKKSSDA DDLPI NAENLQNNLKIIYYSRTFLSIIGGVIAGILGFT LTG
Sbjct: 1   MAGYSSNASEKKSSDAVDDLPILNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTSLTG 60

Query: 61  FIFYFLVMAITSLALATKAGFSSHSYFESWNQILLDGFLSGLM 104
           FIFYFLVMAITS+ LA KAGFS HSYFESWNQILLDGFLSGLM
Sbjct: 61  FIFYFLVMAITSIGLAAKAGFSFHSYFESWNQILLDGFLSGLM 103

[Close]
BLAST of Cla97C03G067770 vs. NCBI nr
Match: KAG6597582.1 (ER membrane protein complex subunit 6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 179.5 bits (454), Expect = 3.3e-41
Identity = 93/103 (90.29%), Postives = 95/103 (92.23%), Query Frame = 0 

Query: 1   MAGYSSAVSEKKSSDAADDLPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG 60
           MAGYSS  SEKKSSDA DD+PI NAENLQNNLKIIYYSRTFLSIIGGVIAGILGFT LTG
Sbjct: 49  MAGYSSNASEKKSSDAVDDIPILNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTSLTG 108

Query: 61  FIFYFLVMAITSLALATKAGFSSHSYFESWNQILLDGFLSGLM 104
           FIFYFLVMAITS+ LA KAGFS HSYFESWNQILLDGFLSGLM
Sbjct: 109 FIFYFLVMAITSIGLAAKAGFSFHSYFESWNQILLDGFLSGLM 151

[Close]
BLAST of Cla97C03G067770 vs. NCBI nr
Match: KAG7029026.1 (ER membrane protein complex subunit 6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 179.5 bits (454), Expect = 3.3e-41
Identity = 93/103 (90.29%), Postives = 95/103 (92.23%), Query Frame = 0 

Query: 1   MAGYSSAVSEKKSSDAADDLPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG 60
           MAGYSS  SEKKSSDA DD+PI NAENLQNNLKIIYYSRTFLSIIGGVIAGILGFT LTG
Sbjct: 58  MAGYSSNASEKKSSDAVDDIPILNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTSLTG 117

Query: 61  FIFYFLVMAITSLALATKAGFSSHSYFESWNQILLDGFLSGLM 104
           FIFYFLVMAITS+ LA KAGFS HSYFESWNQILLDGFLSGLM
Sbjct: 118 FIFYFLVMAITSIGLAAKAGFSFHSYFESWNQILLDGFLSGLM 160

[Close]
BLAST of Cla97C03G067770 vs. ExPASy Swiss-Prot
Match: Q9BV81 (ER membrane protein complex subunit 6 OS=Homo sapiens OX=9606 GN=EMC6 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.0e-08
Identity = 33/82 (40.24%), Postives = 45/82 (54.88%), Query Frame = 0 

Query: 21  PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSLALATKAG 80
           P  +   ++ N  ++ Y RT +S + G  AGILG TGL GFIFY L   + SL L  KAG
Sbjct: 12  PFISEAAVRGNAAVLDYCRTSVSALSGATAGILGLTGLYGFIFYLLASVLLSLLLILKAG 71

Query: 81  FSSHSYFESWNQILLDGFLSGL 103
              + YF+S   +   G + GL
Sbjct: 72  RRWNKYFKSRRPLFTGGLIGGL 93

[Close]
BLAST of Cla97C03G067770 vs. ExPASy Swiss-Prot
Match: Q9CQW0 (ER membrane protein complex subunit 6 OS=Mus musculus OX=10090 GN=Emc6 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.0e-08
Identity = 33/82 (40.24%), Postives = 45/82 (54.88%), Query Frame = 0 

Query: 21  PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSLALATKAG 80
           P  +   ++ N  ++ Y RT +S + G  AGILG TGL GFIFY L   + SL L  KAG
Sbjct: 12  PFISEAAVRGNAAVLDYCRTSVSALSGATAGILGLTGLYGFIFYLLASVLLSLLLILKAG 71

Query: 81  FSSHSYFESWNQILLDGFLSGL 103
              + YF+S   +   G + GL
Sbjct: 72  RRWNKYFKSRRPLFTGGLIGGL 93

[Close]
BLAST of Cla97C03G067770 vs. ExPASy Swiss-Prot
Match: Q6GLC5 (ER membrane protein complex subunit 6 OS=Xenopus tropicalis OX=8364 GN=emc6 PE=3 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.9e-07
Identity = 31/75 (41.33%), Postives = 43/75 (57.33%), Query Frame = 0 

Query: 28  LQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSLALATKAGFSSHSYF 87
           ++ N  ++ Y RT +S + G  AGILG T L GFIFYFL   + SL L  K+G   + YF
Sbjct: 19  VRGNAAVLDYCRTSVSALSGATAGILGLTALYGFIFYFLASFLLSLLLVLKSGRKWNKYF 78

Query: 88  ESWNQILLDGFLSGL 103
           +S   +   G + GL
Sbjct: 79  KSRKPLFTGGLIGGL 93

[Close]
BLAST of Cla97C03G067770 vs. ExPASy Swiss-Prot
Match: Q68EU8 (ER membrane protein complex subunit 6 OS=Xenopus laevis OX=8355 GN=emc6 PE=3 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.5e-07
Identity = 31/75 (41.33%), Postives = 43/75 (57.33%), Query Frame = 0 

Query: 28  LQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSLALATKAGFSSHSYF 87
           ++ N  ++ Y RT +S + G  AGILG T L GFIFYFL   + SL L  K+G   + YF
Sbjct: 19  VRGNAAVLDYCRTSVSALSGATAGILGLTSLYGFIFYFLASFLLSLLLVLKSGRKWNKYF 78

Query: 88  ESWNQILLDGFLSGL 103
           +S   +   G + GL
Sbjct: 79  KSRKPLFTGGLVGGL 93

[Close]
BLAST of Cla97C03G067770 vs. ExPASy Swiss-Prot
Match: Q3ZCG8 (ER membrane protein complex subunit 6 OS=Bos taurus OX=9913 GN=EMC6 PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 3.3e-07
Identity = 32/82 (39.02%), Postives = 44/82 (53.66%), Query Frame = 0 

Query: 21  PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSLALATKAG 80
           P  +   ++ N  ++ Y RT +S + G  AGILG TGL GFIFY L   + SL L  KA 
Sbjct: 12  PFISEAAVRGNAAVLDYCRTSVSALSGATAGILGLTGLYGFIFYLLASILLSLLLILKAR 71

Query: 81  FSSHSYFESWNQILLDGFLSGL 103
              + YF+S   +   G + GL
Sbjct: 72  RRWNKYFKSRRPLFTGGLIGGL 93

[Close]
BLAST of Cla97C03G067770 vs. ExPASy TrEMBL
Match: A0A6J1CBS9 (ER membrane protein complex subunit 6 OS=Momordica charantia OX=3673 GN=LOC111009251 PE=3 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 1.1e-42
Identity = 95/103 (92.23%), Postives = 98/103 (95.15%), Query Frame = 0 

Query: 1   MAGYSSAVSEKKSSDAADDLPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG 60
           MAGYSSA SEKKS++AADD+PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG
Sbjct: 1   MAGYSSAASEKKSTEAADDVPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG 60

Query: 61  FIFYFLVMAITSLALATKAGFSSHSYFESWNQILLDGFLSGLM 104
           FI YFLVMAITSL LA KAGFS HSYFESWNQILLDGFLSGLM
Sbjct: 61  FILYFLVMAITSLGLAAKAGFSFHSYFESWNQILLDGFLSGLM 103

[Close]
BLAST of Cla97C03G067770 vs. ExPASy TrEMBL
Match: A0A6J1I7D9 (ER membrane protein complex subunit 6 OS=Cucurbita maxima OX=3661 GN=LOC111470685 PE=3 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 9.5e-42
Identity = 94/103 (91.26%), Postives = 95/103 (92.23%), Query Frame = 0 

Query: 1   MAGYSSAVSEKKSSDAADDLPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG 60
           MAGYSS  SEKKSSDA DDLPI NAENLQNNLKIIYYSRTFLSIIGGVIAGILGFT LTG
Sbjct: 1   MAGYSSNASEKKSSDAVDDLPILNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTSLTG 60

Query: 61  FIFYFLVMAITSLALATKAGFSSHSYFESWNQILLDGFLSGLM 104
           FIFYFLVMAITS+ LA KAGFS HSYFESWNQILLDGFLSGLM
Sbjct: 61  FIFYFLVMAITSIGLAAKAGFSFHSYFESWNQILLDGFLSGLM 103

[Close]
BLAST of Cla97C03G067770 vs. ExPASy TrEMBL
Match: A0A6J1FFH8 (ER membrane protein complex subunit 6 OS=Cucurbita moschata OX=3662 GN=LOC111443473 PE=3 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 1.6e-41
Identity = 93/103 (90.29%), Postives = 95/103 (92.23%), Query Frame = 0 

Query: 1   MAGYSSAVSEKKSSDAADDLPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG 60
           MAGYSS  SEKKSSDA DD+PI NAENLQNNLKIIYYSRTFLSIIGGVIAGILGFT LTG
Sbjct: 1   MAGYSSNASEKKSSDAVDDIPILNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTSLTG 60

Query: 61  FIFYFLVMAITSLALATKAGFSSHSYFESWNQILLDGFLSGLM 104
           FIFYFLVMAITS+ LA KAGFS HSYFESWNQILLDGFLSGLM
Sbjct: 61  FIFYFLVMAITSIGLAAKAGFSFHSYFESWNQILLDGFLSGLM 103

[Close]
BLAST of Cla97C03G067770 vs. ExPASy TrEMBL
Match: A0A1S3BQB0 (ER membrane protein complex subunit 6 OS=Cucumis melo OX=3656 GN=LOC103492162 PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 2.8e-41
Identity = 93/103 (90.29%), Postives = 97/103 (94.17%), Query Frame = 0 

Query: 1   MAGYSSAVSEKKSSDAADDLPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG 60
           MAGYSS  S+KKSSD+ADD+PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG
Sbjct: 1   MAGYSSTASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG 60

Query: 61  FIFYFLVMAITSLALATKAGFSSHSYFESWNQILLDGFLSGLM 104
           FIFYFLVMAITS+ALA KAGFS HSYFES NQILLDGFL GLM
Sbjct: 61  FIFYFLVMAITSVALAAKAGFSFHSYFESCNQILLDGFLGGLM 103

[Close]
BLAST of Cla97C03G067770 vs. ExPASy TrEMBL
Match: A0A0A0LZ06 (ER membrane protein complex subunit 6 OS=Cucumis sativus OX=3659 GN=Csa_1G569390 PE=3 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 6.1e-41
Identity = 92/103 (89.32%), Postives = 96/103 (93.20%), Query Frame = 0 

Query: 1   MAGYSSAVSEKKSSDAADDLPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG 60
           MAGYSS  S+KKSSD ADD+PIFNAENLQNNLKIIYYSRTFLSIIGGVIAG+LGFTGLTG
Sbjct: 1   MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTG 60

Query: 61  FIFYFLVMAITSLALATKAGFSSHSYFESWNQILLDGFLSGLM 104
           FIFYFLVMAITS+ALA KAGFS HSYFES NQIL DGFLSGLM
Sbjct: 61  FIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLSGLM 103

[Close]
BLAST of Cla97C03G067770 vs. TAIR 10
Match: AT5G49540.1 (Rab5-interacting family protein )

HSP 1 Score: 131.0 bits (328), Expect = 1.3e-30
Identity = 64/95 (67.37%), Postives = 77/95 (81.05%), Query Frame = 0 

Query: 9   SEKKSSDAADDLPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVM 68
           SEK+S D   D+P F+AENLQNNLK+I  SRTFLSII GV+AGI+GF GL GF+FYF+VM
Sbjct: 4   SEKRSKDIMSDIPTFSAENLQNNLKVIQNSRTFLSIIAGVLAGIIGFNGLIGFVFYFVVM 63

Query: 69  AITSLALATKAGFSSHSYFESWNQILLDGFLSGLM 104
            ITS+ L  KAGFS+  YF+SWN++L DGFL GLM
Sbjct: 64  LITSVGLMAKAGFSADLYFDSWNRVLFDGFLGGLM 98

The following BLAST results are available for this feature:
BLAST of Cla97C03G067770 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038880512.11.8e-4294.12ER membrane protein complex subunit 6 [Benincasa hispida][more]
XP_022137968.12.3e-4292.23ER membrane protein complex subunit 6 [Momordica charantia] >XP_022137969.1 ER m... [more]
XP_022972030.12.0e-4191.26ER membrane protein complex subunit 6 [Cucurbita maxima] >XP_022972031.1 ER memb... [more]
KAG6597582.13.3e-4190.29ER membrane protein complex subunit 6, partial [Cucurbita argyrosperma subsp. so... [more]
KAG7029026.13.3e-4190.29ER membrane protein complex subunit 6, partial [Cucurbita argyrosperma subsp. ar... [more]
BLAST of Cla97C03G067770 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9BV813.0e-0840.24ER membrane protein complex subunit 6 OS=Homo sapiens OX=9606 GN=EMC6 PE=1 SV=1[more]
Q9CQW03.0e-0840.24ER membrane protein complex subunit 6 OS=Mus musculus OX=10090 GN=Emc6 PE=1 SV=1[more]
Q6GLC51.9e-0741.33ER membrane protein complex subunit 6 OS=Xenopus tropicalis OX=8364 GN=emc6 PE=3... [more]
Q68EU82.5e-0741.33ER membrane protein complex subunit 6 OS=Xenopus laevis OX=8355 GN=emc6 PE=3 SV=... [more]
Q3ZCG83.3e-0739.02ER membrane protein complex subunit 6 OS=Bos taurus OX=9913 GN=EMC6 PE=3 SV=1[more]
BLAST of Cla97C03G067770 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CBS91.1e-4292.23ER membrane protein complex subunit 6 OS=Momordica charantia OX=3673 GN=LOC11100... [more]
A0A6J1I7D99.5e-4291.26ER membrane protein complex subunit 6 OS=Cucurbita maxima OX=3661 GN=LOC11147068... [more]
A0A6J1FFH81.6e-4190.29ER membrane protein complex subunit 6 OS=Cucurbita moschata OX=3662 GN=LOC111443... [more]
A0A1S3BQB02.8e-4190.29ER membrane protein complex subunit 6 OS=Cucumis melo OX=3656 GN=LOC103492162 PE... [more]
A0A0A0LZ066.1e-4189.32ER membrane protein complex subunit 6 OS=Cucumis sativus OX=3659 GN=Csa_1G569390... [more]
BLAST of Cla97C03G067770 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G49540.11.3e-3067.37Rab5-interacting family protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029008Rab5-interacting protein familyPFAMPF07019Rab5ipcoord: 35..103
e-value: 2.4E-14
score: 53.6
IPR008504ER membrane protein complex subunit 6PANTHERPTHR20994UNCHARACTERIZEDcoord: 8..105

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C03G067770.2Cla97C03G067770.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000045 autophagosome assembly
cellular_component GO:0072546 EMC complex
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0016021 integral component of membrane