Cla97C03G063450 (gene) Watermelon (97103) v2.5

Overview
NameCla97C03G063450
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Descriptioncyclin-dependent protein kinase inhibitor SMR9-like
LocationCla97Chr03: 26064851 .. 26065231 (-)
RNA-Seq ExpressionCla97C03G063450
SyntenyCla97C03G063450
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCTAAAGGAGGAGAGGCAAGAAGAAGAGCAAGAAAAGCAGCAGCAGCAACAGCAACAACAACAACCCAATTGAAGAAAAAGAAGAAGAAGATCAAGAAAATCAAGTTAGAGGAAGAAGAAGAAATTGAAAAAGGTTCAAGCTCCACAGCCATGGCAGCAGCTGCCATTTTTGAAGATCAATCAGCTTCAAGCTCTGATTTTGAAGAGTGTTGTACTCCAAAAGCAGAGAGATTCAAAATCCCAGAAATCAAAATTTGCCCACCAGCTCCAAAAAAGCAAAGGCTTATTTCAAATTGTTCTTTACAAAGACCTTCTCCAATTGCTTTCTTTGCTTCACCAGACATAGAGCTTTTCTTCTTCTTCTCATCACAATGA

mRNA sequence

ATGGCTTCTAAAGGAGGAGAGGCAAGAAGAAGAGCAAGAAAAGCAGCAGCAGCAACAGCAACAACAACAACCCAATTGAAGAAAAAGAAGAAGAAGATCAAGAAAATCAAGTTAGAGGAAGAAGAAGAAATTGAAAAAGGTTCAAGCTCCACAGCCATGGCAGCAGCTGCCATTTTTGAAGATCAATCAGCTTCAAGCTCTGATTTTGAAGAGTGTTGTACTCCAAAAGCAGAGAGATTCAAAATCCCAGAAATCAAAATTTGCCCACCAGCTCCAAAAAAGCAAAGGCTTATTTCAAATTGTTCTTTACAAAGACCTTCTCCAATTGCTTTCTTTGCTTCACCAGACATAGAGCTTTTCTTCTTCTTCTCATCACAATGA

Coding sequence (CDS)

ATGGCTTCTAAAGGAGGAGAGGCAAGAAGAAGAGCAAGAAAAGCAGCAGCAGCAACAGCAACAACAACAACCCAATTGAAGAAAAAGAAGAAGAAGATCAAGAAAATCAAGTTAGAGGAAGAAGAAGAAATTGAAAAAGGTTCAAGCTCCACAGCCATGGCAGCAGCTGCCATTTTTGAAGATCAATCAGCTTCAAGCTCTGATTTTGAAGAGTGTTGTACTCCAAAAGCAGAGAGATTCAAAATCCCAGAAATCAAAATTTGCCCACCAGCTCCAAAAAAGCAAAGGCTTATTTCAAATTGTTCTTTACAAAGACCTTCTCCAATTGCTTTCTTTGCTTCACCAGACATAGAGCTTTTCTTCTTCTTCTCATCACAATGA

Protein sequence

MASKGGEARRRARKAAAATATTTTQLKKKKKKIKKIKLEEEEEIEKGSSSTAMAAAAIFEDQSASSSDFEECCTPKAERFKIPEIKICPPAPKKQRLISNCSLQRPSPIAFFASPDIELFFFFSSQ
Homology
BLAST of Cla97C03G063450 vs. NCBI nr
Match: KGN66487.1 (hypothetical protein Csa_006949 [Cucumis sativus])

HSP 1 Score: 137.5 bits (345), Expect = 7.9e-29
Identity = 99/143 (69.23%), Postives = 104/143 (72.73%), Query Frame = 0

Query: 1   MASKGGEARRRARKAAAATATTTTQLKKK--KKKIK--KIKLEEEEEIEKGSSSTAMAAA 60
           MASK GEARRRARK      TTTTQLK K  KK IK   IKL EEEEIEKG+SS   +  
Sbjct: 1   MASKRGEARRRARK------TTTTQLKNKKIKKNIKNNNIKL-EEEEIEKGTSS---STT 60

Query: 61  AIFEDQSAS--SSDFEE-------CCTPKAERFKIPEIKICPPAPKKQRLI----SNCSL 120
             FE++S S  S DFEE       C TPKAERFKIPEIKICPPAPKK+RL     SNCSL
Sbjct: 61  INFEEKSVSRRSCDFEEEEEEEECCSTPKAERFKIPEIKICPPAPKKRRLFSNSNSNCSL 120

Query: 121 QRPSPIAFFASPDIELFFFFSSQ 127
           QRPSPIAFFASPDIELFFFFSSQ
Sbjct: 121 QRPSPIAFFASPDIELFFFFSSQ 133

BLAST of Cla97C03G063450 vs. NCBI nr
Match: KAG6590203.1 (Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023854.1 Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 135.6 bits (340), Expect = 3.0e-28
Identity = 77/126 (61.11%), Postives = 93/126 (73.81%), Query Frame = 0

Query: 1   MASKGGEARRRARKAAAATATTTTQLKKKKKKIKKIKLEEEEEIEKGSSSTAMAAAAIFE 60
           MASKGG  R + +K A        ++KK K + K+I   +  E  + SSS AMAA A  E
Sbjct: 1   MASKGGGRRNKGKKTAKTQLKKNQKIKKMKDQSKRIVSTKRTEEIEVSSSIAMAAMAAME 60

Query: 61  DQSASSSDFEECCTPKAERFKIPEIKICPPAPKKQRLISNCSLQRPSPIAFFASPDIELF 120
           + ++SSSDFEEC TPKAERF+IPEIKICPPAPKKQR+ SNCS Q+PSPI+FFASPDIE+F
Sbjct: 61  ESASSSSDFEECSTPKAERFRIPEIKICPPAPKKQRITSNCSSQKPSPISFFASPDIEMF 120

Query: 121 FFFSSQ 127
           FF SSQ
Sbjct: 121 FFLSSQ 126

BLAST of Cla97C03G063450 vs. NCBI nr
Match: XP_023530358.1 (cyclin-dependent protein kinase inhibitor SMR9-like [Cucurbita pepo subsp. pepo] >KAG6588189.1 Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 123.6 bits (309), Expect = 1.2e-24
Identity = 80/139 (57.55%), Postives = 92/139 (66.19%), Query Frame = 0

Query: 1   MASKGGEARRRARKAAAATATTTTQLKKKKKKIKK---------------IKLEEEEEIE 60
           MASKGG  RR            T  LKK KKK+K                +  +  EEIE
Sbjct: 1   MASKGGRTRR--------GTNPTPPLKKTKKKLKNSTNNGGRRRRRRRIIMSSKIREEIE 60

Query: 61  KGSSSTAMAAAAIFEDQSASSSDFEECCTPKAERFKIPEIKICPPAPKKQRLISNCSLQR 120
           + ++S++ A AAI  D+ ASSSDFE C TPKA+RFKIPEI+ICPPAPKKQR ISNCSLQ+
Sbjct: 61  EAAASSSSAMAAI--DEQASSSDFEHCSTPKADRFKIPEIQICPPAPKKQRPISNCSLQK 120

Query: 121 PSPIAFFASPDIELFFFFS 125
            SPIAFFASPDIELFFFFS
Sbjct: 121 HSPIAFFASPDIELFFFFS 129

BLAST of Cla97C03G063450 vs. NCBI nr
Match: KAG7022087.1 (Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 121.3 bits (303), Expect = 5.9e-24
Identity = 77/132 (58.33%), Postives = 90/132 (68.18%), Query Frame = 0

Query: 1   MASKGGEARR--------RARKAAAATATTTTQLKKKKKKIKKIKLEEEEEIEKGSSSTA 60
           MASKGG  RR        +  K     +T     +++++ I   K+ EE E    SSS+A
Sbjct: 1   MASKGGRTRRGTNPTPPLKKTKKKLKNSTNNGGRRRRRRIIMSSKIREEIEEAAASSSSA 60

Query: 61  MAAAAIFEDQSASSSDFEECCTPKAERFKIPEIKICPPAPKKQRLISNCSLQRPSPIAFF 120
           MAA     D+ ASSSDFE C TPKA+RFKIPEI+ICPPAPKKQR ISNCSLQ+ SPIAFF
Sbjct: 61  MAAI----DEQASSSDFEHCSTPKADRFKIPEIQICPPAPKKQRPISNCSLQKHSPIAFF 120

Query: 121 ASPDIELFFFFS 125
           ASPDIELFFFFS
Sbjct: 121 ASPDIELFFFFS 128

BLAST of Cla97C03G063450 vs. NCBI nr
Match: XP_022154348.1 (cyclin-dependent protein kinase inhibitor SMR9-like [Momordica charantia])

HSP 1 Score: 119.4 bits (298), Expect = 2.2e-23
Identity = 76/131 (58.02%), Postives = 89/131 (67.94%), Query Frame = 0

Query: 1   MASKGGEARRRARKAAAATATTTTQLKKK-----KKKIKKIKLEEEEEIEKGSSSTAMAA 60
           MASKGG AR + + +      +  ++KK+         K  + E E  +E  SSS AMA 
Sbjct: 1   MASKGGIARTKMKMSKKIKKKSPQRMKKRNPPPPSPPPKNQETETETAVELASSSAAMA- 60

Query: 61  AAIFEDQSASSSDFEECCTPKAERFKIPEIKICPPAPKKQRLISNCS-LQRPSPIAFFAS 120
                +  + SSD EECCTPKAERF+IPEIKICPPAPKKQR+ SNCS LQRPSPIAFFAS
Sbjct: 61  -----ENESMSSDLEECCTPKAERFRIPEIKICPPAPKKQRIFSNCSNLQRPSPIAFFAS 120

Query: 121 PDIELFFFFSS 126
           PDIELFFFFSS
Sbjct: 121 PDIELFFFFSS 125

BLAST of Cla97C03G063450 vs. ExPASy Swiss-Prot
Match: F4IWB3 (Cyclin-dependent protein kinase inhibitor SMR13 OS=Arabidopsis thaliana OX=3702 GN=SMR13 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 3.5e-11
Identity = 32/50 (64.00%), Postives = 39/50 (78.00%), Query Frame = 0

Query: 72  CCTPKAERFKIPEIKICPPAPKKQRLISNCSLQRPSPIAFFASPDIELFF 122
           CCTPKA++ +IPE+  CPPAPKKQR+  NC L+R   I FFA P+IELFF
Sbjct: 54  CCTPKAKKSRIPEMLTCPPAPKKQRVSKNCVLRR-RQIVFFAPPEIELFF 102

BLAST of Cla97C03G063450 vs. ExPASy Swiss-Prot
Match: Q3ECS5 (Cyclin-dependent protein kinase inhibitor SMR9 OS=Arabidopsis thaliana OX=3702 GN=SMR9 PE=3 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.2e-08
Identity = 52/125 (41.60%), Postives = 68/125 (54.40%), Query Frame = 0

Query: 1   MASKGGEARRRARKAAAATATTTTQLKKKKKKIKKIKLEEEEEIEKGSS-STAMAAAAIF 60
           MASKG +  RR         TTT + K+   K          ++   SS ST+  + A  
Sbjct: 1   MASKGKKPLRR---------TTTRRRKRSHFKNPSPPCSINSDVTSTSSTSTSPTSTATP 60

Query: 61  EDQSASSSDFEECCTPKAERFKIPEIKICPPAPKKQRLISNCSLQRPSPIAFFASPDIEL 120
              SA S     CCTP  E+ +IPE+  CPPAPKKQ++  NC+L+R   IAFFA PD+EL
Sbjct: 61  SPVSAESG----CCTP--EKSRIPEMLTCPPAPKKQKVAQNCALRR-RQIAFFAPPDVEL 109

Query: 121 FFFFS 125
           FF F+
Sbjct: 121 FFVFA 109

BLAST of Cla97C03G063450 vs. ExPASy TrEMBL
Match: A0A0A0M041 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G613590 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 3.8e-29
Identity = 99/143 (69.23%), Postives = 104/143 (72.73%), Query Frame = 0

Query: 1   MASKGGEARRRARKAAAATATTTTQLKKK--KKKIK--KIKLEEEEEIEKGSSSTAMAAA 60
           MASK GEARRRARK      TTTTQLK K  KK IK   IKL EEEEIEKG+SS   +  
Sbjct: 1   MASKRGEARRRARK------TTTTQLKNKKIKKNIKNNNIKL-EEEEIEKGTSS---STT 60

Query: 61  AIFEDQSAS--SSDFEE-------CCTPKAERFKIPEIKICPPAPKKQRLI----SNCSL 120
             FE++S S  S DFEE       C TPKAERFKIPEIKICPPAPKK+RL     SNCSL
Sbjct: 61  INFEEKSVSRRSCDFEEEEEEEECCSTPKAERFKIPEIKICPPAPKKRRLFSNSNSNCSL 120

Query: 121 QRPSPIAFFASPDIELFFFFSSQ 127
           QRPSPIAFFASPDIELFFFFSSQ
Sbjct: 121 QRPSPIAFFASPDIELFFFFSSQ 133

BLAST of Cla97C03G063450 vs. ExPASy TrEMBL
Match: A0A6J1DK32 (cyclin-dependent protein kinase inhibitor SMR9-like OS=Momordica charantia OX=3673 GN=LOC111021634 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 1.1e-23
Identity = 76/131 (58.02%), Postives = 89/131 (67.94%), Query Frame = 0

Query: 1   MASKGGEARRRARKAAAATATTTTQLKKK-----KKKIKKIKLEEEEEIEKGSSSTAMAA 60
           MASKGG AR + + +      +  ++KK+         K  + E E  +E  SSS AMA 
Sbjct: 1   MASKGGIARTKMKMSKKIKKKSPQRMKKRNPPPPSPPPKNQETETETAVELASSSAAMA- 60

Query: 61  AAIFEDQSASSSDFEECCTPKAERFKIPEIKICPPAPKKQRLISNCS-LQRPSPIAFFAS 120
                +  + SSD EECCTPKAERF+IPEIKICPPAPKKQR+ SNCS LQRPSPIAFFAS
Sbjct: 61  -----ENESMSSDLEECCTPKAERFRIPEIKICPPAPKKQRIFSNCSNLQRPSPIAFFAS 120

Query: 121 PDIELFFFFSS 126
           PDIELFFFFSS
Sbjct: 121 PDIELFFFFSS 125

BLAST of Cla97C03G063450 vs. ExPASy TrEMBL
Match: A0A6A1UIU7 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR0G007916 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 2.4e-15
Identity = 53/100 (53.00%), Postives = 66/100 (66.00%), Query Frame = 0

Query: 34  KKIKLEEEEEIEKGSSSTAMAAAA---------IFEDQSASSSDFEECCTPKAERFKIPE 93
           K++   + +E  + S S + A ++          FED  A  S    C TPKA+RF+IPE
Sbjct: 23  KRLVASKNQETSRSSPSKSSAKSSNELSKNGEIDFEDVEAIPSSSSGCSTPKAQRFRIPE 82

Query: 94  IKICPPAPKKQRLISNCSLQRPSPIAFFASPDIELFFFFS 125
           I  CPPAPKKQR+ISNCSLQR SPIAFFA PD+ELFFFF+
Sbjct: 83  ISTCPPAPKKQRVISNCSLQR-SPIAFFAPPDLELFFFFA 121

BLAST of Cla97C03G063450 vs. ExPASy TrEMBL
Match: A0A660KN86 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_009775 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 2.4e-15
Identity = 56/110 (50.91%), Postives = 73/110 (66.36%), Query Frame = 0

Query: 17  AATATTTTQLKKK--KKKIKKIKLEEEEEIEKGSSSTAMAAAAIFEDQSASSSDFEECCT 76
           ++T  T  Q ++   KK++   K  +E  I +   S+  +   I +D    S+    CCT
Sbjct: 9   SSTRPTRRQPRRNPFKKRLPHSKTNQEAIISRNLPSSNSSTTTISDDIEIPSTG---CCT 68

Query: 77  PKAERFKIPEIKICPPAPKKQRLISNCSLQRPSPIAFFASPDIELFFFFS 125
           PKA+RF+IPEI  CPPAPKKQRL+SNCSLQR SPIAFFA PD+ELFFFF+
Sbjct: 69  PKAQRFRIPEISTCPPAPKKQRLVSNCSLQR-SPIAFFAPPDLELFFFFA 114

BLAST of Cla97C03G063450 vs. ExPASy TrEMBL
Match: B9GF02 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G257700 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 6.0e-14
Identity = 59/119 (49.58%), Postives = 72/119 (60.50%), Query Frame = 0

Query: 13  RKAAAATATTTTQLKKKKKKIKKIKLEEEEEIEKGSSSTAMAAAAIFEDQSASSSDFE-- 72
           RK   A  T  TQ KK+  K K IK  E   IE   S+++    +          DFE  
Sbjct: 6   RKRTRAKTTRRTQYKKRVMKPKSIK--EASIIEDLPSNSSTTTTSCNGCSKIDGLDFEGV 65

Query: 73  -----ECCTPKAERFKIPEIKICPPAPKKQRLISNCSLQRPSPIAFFASPDIELFFFFS 125
                 C TPKAERF+IPEI+ CPPAP+K+R+ISNCSLQR  PIAFFA PD+ELFFF++
Sbjct: 66  DISASACSTPKAERFRIPEIQTCPPAPRKERIISNCSLQR-RPIAFFAPPDLELFFFYA 121

BLAST of Cla97C03G063450 vs. TAIR 10
Match: AT3G20898.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G51355.1); Has 66 Blast hits to 66 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 69.3 bits (168), Expect = 2.5e-12
Identity = 32/50 (64.00%), Postives = 39/50 (78.00%), Query Frame = 0

Query: 72  CCTPKAERFKIPEIKICPPAPKKQRLISNCSLQRPSPIAFFASPDIELFF 122
           CCTPKA++ +IPE+  CPPAPKKQR+  NC L+R   I FFA P+IELFF
Sbjct: 54  CCTPKAKKSRIPEMLTCPPAPKKQRVSKNCVLRR-RQIVFFAPPEIELFF 102

BLAST of Cla97C03G063450 vs. TAIR 10
Match: AT1G51355.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G20898.1); Has 52 Blast hits to 52 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 60.8 bits (146), Expect = 8.8e-10
Identity = 52/125 (41.60%), Postives = 68/125 (54.40%), Query Frame = 0

Query: 1   MASKGGEARRRARKAAAATATTTTQLKKKKKKIKKIKLEEEEEIEKGSS-STAMAAAAIF 60
           MASKG +  RR         TTT + K+   K          ++   SS ST+  + A  
Sbjct: 1   MASKGKKPLRR---------TTTRRRKRSHFKNPSPPCSINSDVTSTSSTSTSPTSTATP 60

Query: 61  EDQSASSSDFEECCTPKAERFKIPEIKICPPAPKKQRLISNCSLQRPSPIAFFASPDIEL 120
              SA S     CCTP  E+ +IPE+  CPPAPKKQ++  NC+L+R   IAFFA PD+EL
Sbjct: 61  SPVSAESG----CCTP--EKSRIPEMLTCPPAPKKQKVAQNCALRR-RQIAFFAPPDVEL 109

Query: 121 FFFFS 125
           FF F+
Sbjct: 121 FFVFA 109

BLAST of Cla97C03G063450 vs. TAIR 10
Match: AT1G60783.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 43.1 bits (100), Expect = 1.9e-04
Identity = 24/63 (38.10%), Postives = 37/63 (58.73%), Query Frame = 0

Query: 63  SASSSDFEECC--TPKAERFKIPEIKICPPAPKKQRLISNCSLQRPSPIAFFASPDIELF 122
           + S+++ E+ C  TP A+  +IP +  CPPAPKK++L    S     P  FF+ PD+E  
Sbjct: 44  AVSNTEDEDLCPTTPTADSVRIPTVIPCPPAPKKRKLTLKVSY---GPREFFSPPDLETV 103

Query: 123 FFF 124
           F +
Sbjct: 104 FIY 103

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN66487.17.9e-2969.23hypothetical protein Csa_006949 [Cucumis sativus][more]
KAG6590203.13.0e-2861.11Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma... [more]
XP_023530358.11.2e-2457.55cyclin-dependent protein kinase inhibitor SMR9-like [Cucurbita pepo subsp. pepo]... [more]
KAG7022087.15.9e-2458.33Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma... [more]
XP_022154348.12.2e-2358.02cyclin-dependent protein kinase inhibitor SMR9-like [Momordica charantia][more]
Match NameE-valueIdentityDescription
F4IWB33.5e-1164.00Cyclin-dependent protein kinase inhibitor SMR13 OS=Arabidopsis thaliana OX=3702 ... [more]
Q3ECS51.2e-0841.60Cyclin-dependent protein kinase inhibitor SMR9 OS=Arabidopsis thaliana OX=3702 G... [more]
Match NameE-valueIdentityDescription
A0A0A0M0413.8e-2969.23Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G613590 PE=4 SV=1[more]
A0A6J1DK321.1e-2358.02cyclin-dependent protein kinase inhibitor SMR9-like OS=Momordica charantia OX=36... [more]
A0A6A1UIU72.4e-1553.00Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR0G007916 PE=4 SV=1[more]
A0A660KN862.4e-1550.91Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_009775 PE=4 SV=1[more]
B9GF026.0e-1449.58Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G257700 PE=4 ... [more]
Match NameE-valueIdentityDescription
AT3G20898.12.5e-1264.00unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G51355.18.8e-1041.60unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G60783.11.9e-0438.10unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 26..46
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availablePANTHERPTHR33142:SF28SUBFAMILY NOT NAMEDcoord: 24..125
IPR040389Cyclin-dependent protein kinase inhibitor SMRPANTHERPTHR33142CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR13coord: 24..125

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C03G063450.1Cla97C03G063450.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045839 negative regulation of mitotic nuclear division
biological_process GO:0032875 regulation of DNA endoreduplication
cellular_component GO:0005634 nucleus