Cla97C03G063208 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C03G063208
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	Transposon TX1 uncharacterized 149 kDa protein
Location	Cla97Chr03: 25596651 .. 25597646 (-)
RNA-Seq Expression	Cla97C03G063208
Synteny	Cla97C03G063208

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTGAAGATTGGTGGAAAAAACATCCTCTCATAGGCTGGCCAGGCTATGGCTTCATTCAAAAACTCAAAGGCCTGAAATTGGATCTAAAAGAATGGAAGCAGCAAACTTTTGGAATCATTGAATCACAGAAATCAGCGCAGAAGAAAACACCTTCAGCAAGGCAATGCATGACATGCGCAATTCCATCAAAGAAAATTTGCTCTTCCTGCCGGCTGCAGAAGAAATTAAATGGCCACAGAAATGCAAGGCATGTATCTAGAGGGTTATGAGAACATTACCTTCTTTCATAAATATGGCTGCAAAGCGAAGAAAAAACATCGTGGGGTTCTCAATGCCAAAACACAAGCCTGATAGGTGATTTAGAGATTGAGGCTGAATTTATCACCTTCCACAAGACAATTTTTTCTCGAAAACAAGGAAGGAGATTTCTCCCACACTCTATCTTTTGGTCCCTTCAATAGTGAAGAAAGTAGGTTCCTTGACGAGCCTCTCATAATAGGTGAGATTTGGTTAGTGGTTAAGGCTTTGGGCACCAACAAAACCTTGGGGCAATATGGTTACATTGCGGAATTCTTTAAAAAGTCATGGAACATTGAAAAGGATGACCTGGTTAGAGTATTCCAAGAATGCTTTGGCAATTTTGATGAAAAATACATTTTCCTCATCCCAAAAAGGATTGATGCTTGAAAAGTTGGTGACTTTCGTCCGATTAGTCTAAACACTTTGTTGTACAAGATCATTGCACAGGTCTCTCAAACCAACTTAAGAAAGTTCTACCAACCACCATTTCAAAATACCAATCTGCTTTTTTGCAAGGAAGACAAAATTTGGATCCTTCCCTTATTGCCAACAAAATAATTGAAGATTCGCATAGAAAGAAGACTGAAGGAGTGGCCATCAAATTCGAAGTGCAAAGAGCCTTTGACAAGGTGGGTTTGGATTACCTTGATGAAATGTTGAAGGTCAAGGGTTTTGGTGACAAATGGAGGTGA

mRNA sequence

ATGCCTGAAGATTGGTGGAAAAAACATCCTCTCATAGGCTGGCCAGGCTATGGCTTCATTCAAAAACTCAAAGGCCTGAAATTGGATCTAAAAGAATGGAAGCAGCAAACTTTTGGAATCATTGAATCACAGAAATCAGCGCAGAAGAAAACACCTTCAGCAAGGCAATGCATGACATGCGCAATTCCATCAAAGAAAATTTGCTCTTCCTGCCGGCTGCAGAAGAAATTAAATGGCCACAGAAATGCAAGGCATGAAGGAGATTTCTCCCACACTCTATCTTTTGGTCCCTTCAATAGTGAAGAAAGTAGGTTCCTTGACGAGCCTCTCATAATAGGTGAGATTTGGTTAGTGGTTAAGGCTTTGGGCACCAACAAAACCTTGGGGCAATATGGTTACATTGCGGAATTCTTTAAAAAGTCATGGAACATTGAAAAGGATGACCTGTCTAAACACTTTGTTGTACAAGATCATTGCACAGGTCTCTCAAACCAACTTAAGAAAGTTCTACCAACCACCATTTCAAAATACCAATCTGCTTTTTTGCAAGGAAGACAAAATTTGGATCCTTCCCTTATTGCCAACAAAATAATTGAAGATTCGCATAGAAAGAAGACTGAAGGAGTGGCCATCAAATTCGAAGTGCAAAGAGCCTTTGACAAGGTGGGTTTGGATTACCTTGATGAAATGTTGAAGGTCAAGGGTTTTGGTGACAAATGGAGGTGA

Coding sequence (CDS)

ATGCCTGAAGATTGGTGGAAAAAACATCCTCTCATAGGCTGGCCAGGCTATGGCTTCATTCAAAAACTCAAAGGCCTGAAATTGGATCTAAAAGAATGGAAGCAGCAAACTTTTGGAATCATTGAATCACAGAAATCAGCGCAGAAGAAAACACCTTCAGCAAGGCAATGCATGACATGCGCAATTCCATCAAAGAAAATTTGCTCTTCCTGCCGGCTGCAGAAGAAATTAAATGGCCACAGAAATGCAAGGCATGAAGGAGATTTCTCCCACACTCTATCTTTTGGTCCCTTCAATAGTGAAGAAAGTAGGTTCCTTGACGAGCCTCTCATAATAGGTGAGATTTGGTTAGTGGTTAAGGCTTTGGGCACCAACAAAACCTTGGGGCAATATGGTTACATTGCGGAATTCTTTAAAAAGTCATGGAACATTGAAAAGGATGACCTGTCTAAACACTTTGTTGTACAAGATCATTGCACAGGTCTCTCAAACCAACTTAAGAAAGTTCTACCAACCACCATTTCAAAATACCAATCTGCTTTTTTGCAAGGAAGACAAAATTTGGATCCTTCCCTTATTGCCAACAAAATAATTGAAGATTCGCATAGAAAGAAGACTGAAGGAGTGGCCATCAAATTCGAAGTGCAAAGAGCCTTTGACAAGGTGGGTTTGGATTACCTTGATGAAATGTTGAAGGTCAAGGGTTTTGGTGACAAATGGAGGTGA

Protein sequence

MPEDWWKKHPLIGWPGYGFIQKLKGLKLDLKEWKQQTFGIIESQKSAQKKTPSARQCMTCAIPSKKICSSCRLQKKLNGHRNARHEGDFSHTLSFGPFNSEESRFLDEPLIIGEIWLVVKALGTNKTLGQYGYIAEFFKKSWNIEKDDLSKHFVVQDHCTGLSNQLKKVLPTTISKYQSAFLQGRQNLDPSLIANKIIEDSHRKKTEGVAIKFEVQRAFDKVGLDYLDEMLKVKGFGDKWR

Homology

[Close]

BLAST of Cla97C03G063208 vs. NCBI nr
Match: RVW71406.1 (Uridylate kinase [Vitis vinifera])

HSP 1 Score: 126.7 bits (317), Expect = 2.7e-25
Identity = 76/240 (31.67%), Postives = 120/240 (50.00%), Query Frame = 0


Query: 4   DWWKKHPLIGWPGYGFIQKLKGLKLDLKEWKQQTFGIIESQKSAQKKTPSARQCMTCAIP 63
           DWW++  + GW  + F++KLK +K  LK+W +  FG +  +K+                 
Sbjct: 571 DWWQECMVEGWESHKFMRKLKFVKSKLKDWNKVAFGDLRERKNL---------------- 630

Query: 64  SKKICSSCRLQKKLNGHRNARHEGDFSHTLSFGPFNSEESRFLDEPLIIGEIWLVVKALG 123
              I S+     ++ G             L + P + E + +LD P I  E+ L V  L 
Sbjct: 631 ---ILSNLGASWRVEG-------------LDWVPISRESAAWLDRPFIEEEVRLTVFQLN 690

Query: 124 TNKTLGQYGYIAEFFKKSWNIEKDDLSKHFVVQDHCTGLSNQ--LKKVLPTTISKYQSAF 183
             K  G  G+    ++  WN+ K++L + F ++ H  G+ NQ  L+KVL  TI   Q AF
Sbjct: 691 KEKAPGPDGFTIAVYQDCWNVIKENLMRVF-LEFHTNGIINQRCLRKVLHETIFGSQGAF 750

Query: 184 LQGRQNLDPSLIANKIIEDSHRKKTEGVAIKFEVQRAFDKVGLDYLDEMLKVKGFGDKWR 242
           ++GR  LD  LIANK++++  R   EGV  K + ++A+D V   +LD +L+ K F  KWR
Sbjct: 751 VEGRHILDAVLIANKVVDEKRRSGEEGVVFKIDFEKAYDYVDWGFLDHVLERKEFSPKWR 777

[Close]

BLAST of Cla97C03G063208 vs. NCBI nr
Match: RVW90395.1 (hypothetical protein CK203_045762 [Vitis vinifera])

HSP 1 Score: 124.0 bits (310), Expect = 1.7e-24
Identity = 81/279 (29.03%), Postives = 129/279 (46.24%), Query Frame = 0


Query: 4   DWWKKHPLIGWPGYGFIQKLKGLKLDLKEWKQQTFGIIESQKSAQ------KKTPSARQC 63
           DWW      GW G+ F+++L+ +K  LKEW + +FG ++ +K  +      ++    RQ 
Sbjct: 109 DWWSGFQGNGWEGHKFMRRLQYVKAKLKEWNKFSFGELKEKKKRELEELILREEIHWRQK 168

Query: 64  MTCAIPSKKICSSCRLQKKLNGHRNARHEGDFSHT------------------------- 123
                  +  C+S    K  NG RN ++  +  +                          
Sbjct: 169 AKVKWVKEGDCNSKFYHKVANGRRNRKYIKELENERGLVLKNAESITEEILHYFEKLYTN 228

Query: 124 ----------LSFGPFNSEESRFLDEPLIIGEIWLVVKALGTNKTLGQYGYIAEFFKKSW 183
                     L + P + E +  LD P    EI   +  L  +K  G  G+    F++ W
Sbjct: 229 PTGESWGVEGLDWSPISEESALRLDSPFTEEEISKAIFQLDRDKAPGPDGFTIAVFQECW 288

Query: 184 NIEKDDLSKHFVVQDHCTGLSNQLKKVLPTTISKYQSAFLQGRQNLDPSLIANKIIEDSH 242
           ++ K+DLS    +QD+      +L+ VL  TI   Q AF+QGRQ LD  LIAN+I+++  
Sbjct: 289 DVIKEDLS----LQDNSQSALGRLRGVLHETIHYTQGAFVQGRQILDAVLIANEIVDERR 348

[Close]

BLAST of Cla97C03G063208 vs. NCBI nr
Match: RVW25440.1 (Preprotein translocase subunit SECY, chloroplastic [Vitis vinifera])

HSP 1 Score: 121.3 bits (303), Expect = 1.1e-23
Identity = 78/253 (30.83%), Postives = 128/253 (50.59%), Query Frame = 0


Query: 4   DWWKKHPLIGWPGYGFIQKLKGLKLDLKEWKQQTFGIIESQKSAQKKTPSARQCMTCAIP 63
           DWW++  + GW G+ F++KLK +K  LK+W +  FG +      ++KT S    M     
Sbjct: 535 DWWQECTVEGWEGHKFMRKLKFVKSKLKDWNKVAFGDLR-----EEKTHSFGLRMANGRR 594

Query: 64  SKKICSSCRLQK-----------KLNGHRNARHEGDFSHT--LSFGPFNSEESRFLDEPL 123
           ++K   S   ++            L G   ++ EG       + + P   E +  LD+P 
Sbjct: 595 NRKFIESLIFERGVTLSNIEEIVNLFGKLYSKPEGASWRVEGVDWVPIQGESAVCLDKPF 654

Query: 124 IIGEIWLVVKALGTNKTLGQYGYIAEFFKKSWNIEKDDLSKHFVVQDHCTGLSNQ--LKK 183
              E+ + V  L   KT G  G+    +++ W++ K+DL + F ++ H  G+ NQ  L+K
Sbjct: 655 FEEEVRMAVFHLNKEKTPGLNGFTIAVYQEYWDVIKEDLMRVF-LEFHTNGIINQRRLRK 714

Query: 184 VLPTTISKYQSAFLQGRQNLDPSLIANKIIEDSHRKKTEGVAIKFEVQRAFDKVGLDYLD 242
           V        Q AF++GR  LD  LIAN+++++  R   EGV  K + ++A+D V   +LD
Sbjct: 715 VFHEVFGS-QGAFVEGRHILDAMLIANEVVDEKRRSGEEGVVFKIDFKKAYDHVDWGFLD 774

[Close]

BLAST of Cla97C03G063208 vs. NCBI nr
Match: RVW38032.1 (LINE-1 retrotransposable element ORF2 protein [Vitis vinifera])

HSP 1 Score: 119.4 bits (298), Expect = 4.3e-23
Identity = 73/237 (30.80%), Postives = 117/237 (49.37%), Query Frame = 0


Query: 5   WWKKHPLIGWPGYGFIQKLKGLKLDLKEWKQQTFGIIESQKSAQKKTPSARQCMTCAIPS 64
           WW++    GW G+ F++KL+ +K  LK W + +FG ++S K                   
Sbjct: 276 WWREFQGNGWEGHKFMRKLQFVKAKLKVWNKASFGELKSIKE------------------ 335

Query: 65  KKICSSCRLQKKLNGHRNARHEGDFSHTLSFGPFNSEESRFLDEPLIIGEIWLVVKALGT 124
                  R  +KL  + +   E      L + P + E +  L+ P    EI+  +  +  
Sbjct: 336 ----EILRYFEKL--YTSPSGESWRVEGLDWSPISGESAFRLESPFTEEEIFKAIFQMDR 395

Query: 125 NKTLGQYGYIAEFFKKSWNIEKDDLSKHFVVQDHCTGLSNQLKKVLPTTISKYQSAFLQG 184
           +K  G  G+    F+  W + K+DL K          L+ +++ VL  TI   Q AF+QG
Sbjct: 396 DKAPGPDGFTIAVFQDCWEVIKEDLVKII-----AKVLAGRIRGVLHETIHSTQGAFVQG 455

Query: 185 RQNLDPSLIANKIIEDSHRKKTEGVAIKFEVQRAFDKVGLDYLDEMLKVKGFGDKWR 242
           RQ LD  LIAN+I+++  R   EGV  K + ++A+D V  D+LD +L++KGFG +WR
Sbjct: 456 RQILDAVLIANEIVDEKRRSGEEGVVFKIDFEKAYDHVSWDFLDHVLEMKGFGIRWR 483

[Close]

BLAST of Cla97C03G063208 vs. NCBI nr
Match: RVW55658.1 (Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera])

HSP 1 Score: 119.0 bits (297), Expect = 5.6e-23
Identity = 87/325 (26.77%), Postives = 138/325 (42.46%), Query Frame = 0


Query: 3   EDWWKKHPLIGWPGYGFIQKLKGLKLDLKEWKQQTFGIIESQKSA------------QKK 62
           + WW      GW G+ F+ KL+ +K +LKEW + +FG++  +K +            Q  
Sbjct: 243 KSWWSGFQGTGWEGHKFMMKLQFVKANLKEWNKVSFGVLNERKKSILKDIANLDVIEQGG 302

Query: 63  TPSARQCMTCAIPSKKI------------------------CSSCRLQKKLNGHRNAR-- 122
             S+   +  A+  +++                        C+S    K  NG RN +  
Sbjct: 303 GLSSELIIQRALRKEELEELILREEIHWRQKARVKWVKEGDCNSKFFHKVANGRRNRKFI 362

Query: 123 -------------------------------HEGD--FSHTLSFGPFNSEESRFLDEPLI 182
                                          H G+      L + P + E +  LD P I
Sbjct: 363 KVLENESGVVLNDSESIIEEILHYFEKLYSGHIGEPWRVEGLDWSPISEESASKLDSPFI 422

Query: 183 IGEIWLVVKALGTNKTLGQYGYIAEFFKKSWNIEKDDLSKHFVVQDHCTGLSNQ------ 242
             EI   +  L  +K LG  G+    F+  W++ K+DL +  + + H  G+ NQ      
Sbjct: 423 EEEIHKAISQLDWDKALGPDGFTIAVFQDCWDVIKEDLVR-VIAEFHSRGIINQSTNASF 482

[Close]

BLAST of Cla97C03G063208 vs. ExPASy TrEMBL
Match: A0A438GGS3 (Uridylate kinase OS=Vitis vinifera OX=29760 GN=pyrH_0 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.3e-25
Identity = 76/240 (31.67%), Postives = 120/240 (50.00%), Query Frame = 0


Query: 4   DWWKKHPLIGWPGYGFIQKLKGLKLDLKEWKQQTFGIIESQKSAQKKTPSARQCMTCAIP 63
           DWW++  + GW  + F++KLK +K  LK+W +  FG +  +K+                 
Sbjct: 571 DWWQECMVEGWESHKFMRKLKFVKSKLKDWNKVAFGDLRERKNL---------------- 630

Query: 64  SKKICSSCRLQKKLNGHRNARHEGDFSHTLSFGPFNSEESRFLDEPLIIGEIWLVVKALG 123
              I S+     ++ G             L + P + E + +LD P I  E+ L V  L 
Sbjct: 631 ---ILSNLGASWRVEG-------------LDWVPISRESAAWLDRPFIEEEVRLTVFQLN 690

Query: 124 TNKTLGQYGYIAEFFKKSWNIEKDDLSKHFVVQDHCTGLSNQ--LKKVLPTTISKYQSAF 183
             K  G  G+    ++  WN+ K++L + F ++ H  G+ NQ  L+KVL  TI   Q AF
Sbjct: 691 KEKAPGPDGFTIAVYQDCWNVIKENLMRVF-LEFHTNGIINQRCLRKVLHETIFGSQGAF 750

Query: 184 LQGRQNLDPSLIANKIIEDSHRKKTEGVAIKFEVQRAFDKVGLDYLDEMLKVKGFGDKWR 242
           ++GR  LD  LIANK++++  R   EGV  K + ++A+D V   +LD +L+ K F  KWR
Sbjct: 751 VEGRHILDAVLIANKVVDEKRRSGEEGVVFKIDFEKAYDYVDWGFLDHVLERKEFSPKWR 777

[Close]

BLAST of Cla97C03G063208 vs. ExPASy TrEMBL
Match: A0A438I108 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_045762 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 8.4e-25
Identity = 81/279 (29.03%), Postives = 129/279 (46.24%), Query Frame = 0


Query: 4   DWWKKHPLIGWPGYGFIQKLKGLKLDLKEWKQQTFGIIESQKSAQ------KKTPSARQC 63
           DWW      GW G+ F+++L+ +K  LKEW + +FG ++ +K  +      ++    RQ 
Sbjct: 109 DWWSGFQGNGWEGHKFMRRLQYVKAKLKEWNKFSFGELKEKKKRELEELILREEIHWRQK 168

Query: 64  MTCAIPSKKICSSCRLQKKLNGHRNARHEGDFSHT------------------------- 123
                  +  C+S    K  NG RN ++  +  +                          
Sbjct: 169 AKVKWVKEGDCNSKFYHKVANGRRNRKYIKELENERGLVLKNAESITEEILHYFEKLYTN 228

Query: 124 ----------LSFGPFNSEESRFLDEPLIIGEIWLVVKALGTNKTLGQYGYIAEFFKKSW 183
                     L + P + E +  LD P    EI   +  L  +K  G  G+    F++ W
Sbjct: 229 PTGESWGVEGLDWSPISEESALRLDSPFTEEEISKAIFQLDRDKAPGPDGFTIAVFQECW 288

Query: 184 NIEKDDLSKHFVVQDHCTGLSNQLKKVLPTTISKYQSAFLQGRQNLDPSLIANKIIEDSH 242
           ++ K+DLS    +QD+      +L+ VL  TI   Q AF+QGRQ LD  LIAN+I+++  
Sbjct: 289 DVIKEDLS----LQDNSQSALGRLRGVLHETIHYTQGAFVQGRQILDAVLIANEIVDERR 348

[Close]

BLAST of Cla97C03G063208 vs. ExPASy TrEMBL
Match: A0A438CQF2 (Preprotein translocase subunit SECY, chloroplastic OS=Vitis vinifera OX=29760 GN=SECY_1 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 5.5e-24
Identity = 78/253 (30.83%), Postives = 128/253 (50.59%), Query Frame = 0


Query: 4   DWWKKHPLIGWPGYGFIQKLKGLKLDLKEWKQQTFGIIESQKSAQKKTPSARQCMTCAIP 63
           DWW++  + GW G+ F++KLK +K  LK+W +  FG +      ++KT S    M     
Sbjct: 535 DWWQECTVEGWEGHKFMRKLKFVKSKLKDWNKVAFGDLR-----EEKTHSFGLRMANGRR 594

Query: 64  SKKICSSCRLQK-----------KLNGHRNARHEGDFSHT--LSFGPFNSEESRFLDEPL 123
           ++K   S   ++            L G   ++ EG       + + P   E +  LD+P 
Sbjct: 595 NRKFIESLIFERGVTLSNIEEIVNLFGKLYSKPEGASWRVEGVDWVPIQGESAVCLDKPF 654

Query: 124 IIGEIWLVVKALGTNKTLGQYGYIAEFFKKSWNIEKDDLSKHFVVQDHCTGLSNQ--LKK 183
              E+ + V  L   KT G  G+    +++ W++ K+DL + F ++ H  G+ NQ  L+K
Sbjct: 655 FEEEVRMAVFHLNKEKTPGLNGFTIAVYQEYWDVIKEDLMRVF-LEFHTNGIINQRRLRK 714

Query: 184 VLPTTISKYQSAFLQGRQNLDPSLIANKIIEDSHRKKTEGVAIKFEVQRAFDKVGLDYLD 242
           V        Q AF++GR  LD  LIAN+++++  R   EGV  K + ++A+D V   +LD
Sbjct: 715 VFHEVFGS-QGAFVEGRHILDAMLIANEVVDEKRRSGEEGVVFKIDFKKAYDHVDWGFLD 774

[Close]

BLAST of Cla97C03G063208 vs. ExPASy TrEMBL
Match: A0A438DRE2 (LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=Pol_11 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 2.1e-23
Identity = 73/237 (30.80%), Postives = 117/237 (49.37%), Query Frame = 0


Query: 5   WWKKHPLIGWPGYGFIQKLKGLKLDLKEWKQQTFGIIESQKSAQKKTPSARQCMTCAIPS 64
           WW++    GW G+ F++KL+ +K  LK W + +FG ++S K                   
Sbjct: 276 WWREFQGNGWEGHKFMRKLQFVKAKLKVWNKASFGELKSIKE------------------ 335

Query: 65  KKICSSCRLQKKLNGHRNARHEGDFSHTLSFGPFNSEESRFLDEPLIIGEIWLVVKALGT 124
                  R  +KL  + +   E      L + P + E +  L+ P    EI+  +  +  
Sbjct: 336 ----EILRYFEKL--YTSPSGESWRVEGLDWSPISGESAFRLESPFTEEEIFKAIFQMDR 395

Query: 125 NKTLGQYGYIAEFFKKSWNIEKDDLSKHFVVQDHCTGLSNQLKKVLPTTISKYQSAFLQG 184
           +K  G  G+    F+  W + K+DL K          L+ +++ VL  TI   Q AF+QG
Sbjct: 396 DKAPGPDGFTIAVFQDCWEVIKEDLVKII-----AKVLAGRIRGVLHETIHSTQGAFVQG 455

Query: 185 RQNLDPSLIANKIIEDSHRKKTEGVAIKFEVQRAFDKVGLDYLDEMLKVKGFGDKWR 242
           RQ LD  LIAN+I+++  R   EGV  K + ++A+D V  D+LD +L++KGFG +WR
Sbjct: 456 RQILDAVLIANEIVDEKRRSGEEGVVFKIDFEKAYDHVSWDFLDHVLEMKGFGIRWR 483

[Close]

BLAST of Cla97C03G063208 vs. ExPASy TrEMBL
Match: A0A438F6L0 (Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX2_23 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 2.7e-23
Identity = 87/325 (26.77%), Postives = 138/325 (42.46%), Query Frame = 0


Query: 3   EDWWKKHPLIGWPGYGFIQKLKGLKLDLKEWKQQTFGIIESQKSA------------QKK 62
           + WW      GW G+ F+ KL+ +K +LKEW + +FG++  +K +            Q  
Sbjct: 243 KSWWSGFQGTGWEGHKFMMKLQFVKANLKEWNKVSFGVLNERKKSILKDIANLDVIEQGG 302

Query: 63  TPSARQCMTCAIPSKKI------------------------CSSCRLQKKLNGHRNAR-- 122
             S+   +  A+  +++                        C+S    K  NG RN +  
Sbjct: 303 GLSSELIIQRALRKEELEELILREEIHWRQKARVKWVKEGDCNSKFFHKVANGRRNRKFI 362

Query: 123 -------------------------------HEGD--FSHTLSFGPFNSEESRFLDEPLI 182
                                          H G+      L + P + E +  LD P I
Sbjct: 363 KVLENESGVVLNDSESIIEEILHYFEKLYSGHIGEPWRVEGLDWSPISEESASKLDSPFI 422

Query: 183 IGEIWLVVKALGTNKTLGQYGYIAEFFKKSWNIEKDDLSKHFVVQDHCTGLSNQ------ 242
             EI   +  L  +K LG  G+    F+  W++ K+DL +  + + H  G+ NQ      
Sbjct: 423 EEEIHKAISQLDWDKALGPDGFTIAVFQDCWDVIKEDLVR-VIAEFHSRGIINQSTNASF 482

[Close]

BLAST of Cla97C03G063208 vs. TAIR 10
Match: AT4G20520.1 (RNA binding;RNA-directed DNA polymerases )

HSP 1 Score: 45.4 bits (106), Expect = 7.3e-05
Identity = 22/78 (28.21%), Postives = 45/78 (57.69%), Query Frame = 0


Query: 165 QLKKVLPTTISKYQSAFLQGRQNLDPSLIANKIIEDSHRKK-TEG-VAIKFEVQRAFDKV 224
           +LK ++   I   Q++F+ GR + D  +   + +    RKK  +G + +K ++++A+D++
Sbjct: 4   RLKPLMTNLIGPAQASFIPGRVSTDNIVFVQEAVHSMRRKKGVKGWMLLKLDLEKAYDRI 63

Query: 225 GLDYLDEMLKVKGFGDKW 241
             DYL++ L   GF + W
Sbjct: 64  RWDYLEDTLISAGFPEVW 81

The following BLAST results are available for this feature:

BLAST of Cla97C03G063208 vs. NCBI nr


Match Name	E-value	Identity	Description
RVW71406.1	2.7e-25	31.67	Uridylate kinase [Vitis vinifera]	[more]
RVW90395.1	1.7e-24	29.03	hypothetical protein CK203_045762 [Vitis vinifera]	[more]
RVW25440.1	1.1e-23	30.83	Preprotein translocase subunit SECY, chloroplastic [Vitis vinifera]	[more]
RVW38032.1	4.3e-23	30.80	LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]	[more]
RVW55658.1	5.6e-23	26.77	Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]	[more]

BLAST of Cla97C03G063208 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cla97C03G063208 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A438GGS3	1.3e-25	31.67	Uridylate kinase OS=Vitis vinifera OX=29760 GN=pyrH_0 PE=4 SV=1	[more]
A0A438I108	8.4e-25	29.03	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_045762 PE=4 SV=1	[more]
A0A438CQF2	5.5e-24	30.83	Preprotein translocase subunit SECY, chloroplastic OS=Vitis vinifera OX=29760 GN...	[more]
A0A438DRE2	2.1e-23	30.80	LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=Pol_...	[more]
A0A438F6L0	2.7e-23	26.77	Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX...	[more]

BLAST of Cla97C03G063208 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G20520.1	7.3e-05	28.21	RNA binding;RNA-directed DNA polymerases	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C03G063208.1	Cla97C03G063208.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044237	cellular metabolic process