Cla97C03G062770 (gene) Watermelon (97103) v2.5

Overview
NameCla97C03G062770
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionUnknown protein
LocationCla97Chr03: 24204192 .. 24204575 (-)
RNA-Seq ExpressionCla97C03G062770
SyntenyCla97C03G062770
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAACTTTTATTATCTTTTCATTATTCCGAAAGTCTTTGAAATCGCATGAGCCATGGGGAACCCAAAATTGGGGTTGGAGTCCTTTTCGGTCTGAGAACATGTTGTTAAAGCACCCTTCTTTTAAGGCTAATAGTTCCTCATGGTGGAATGTCAAGGTTCCAGGTAAGTGGGAAGATTATCGTTTTACTATCTTCGTCCTGCTTTTTCTAGAGAGGCTTCTGTGGACTTGGTCTTTTGTATTCCCTTGTAGGCTTTTGCAGGCCAACCTCCAAATGTGTCAAGTGTCATTGTGGGAAAGGAATAAATTACGACTCAGTGAAGAACAAGTTCTAGCTGACAGATTTTCTTCTGACGAGTTAGTAAGCTGTGAAATTATATAA

mRNA sequence

ATGAAAACTTTTATTATCTTTTCATTATTCCGAAAGTCTTTGAAATCGCATGAGCCATGGGGAACCCAAAATTGGGGTTGGAGTCCTTTTCGGTCTGAGAACATGTTGTTAAAGCACCCTTCTTTTAAGGCTAATAGTTCCTCATGGTGGAATGTCAAGGTTCCAGGTAAGTGGGAAGATTATCGTTTTACTATCTTCGTCCTGCTTTTTCTAGAGAGGCTTCTGTGGACTTGGTCTTTTGTATTCCCTTGTAGGCTTTTGCAGGCCAACCTCCAAATGTGTCAAGTGTCATTGTGGGAAAGGAATAAATTACGACTCAGTGAAGAACAAGTTCTAGCTGACAGATTTTCTTCTGACGAGTTAGTAAGCTGTGAAATTATATAA

Coding sequence (CDS)

ATGAAAACTTTTATTATCTTTTCATTATTCCGAAAGTCTTTGAAATCGCATGAGCCATGGGGAACCCAAAATTGGGGTTGGAGTCCTTTTCGGTCTGAGAACATGTTGTTAAAGCACCCTTCTTTTAAGGCTAATAGTTCCTCATGGTGGAATGTCAAGGTTCCAGGTAAGTGGGAAGATTATCGTTTTACTATCTTCGTCCTGCTTTTTCTAGAGAGGCTTCTGTGGACTTGGTCTTTTGTATTCCCTTGTAGGCTTTTGCAGGCCAACCTCCAAATGTGTCAAGTGTCATTGTGGGAAAGGAATAAATTACGACTCAGTGAAGAACAAGTTCTAGCTGACAGATTTTCTTCTGACGAGTTAGTAAGCTGTGAAATTATATAA

Protein sequence

MKTFIIFSLFRKSLKSHEPWGTQNWGWSPFRSENMLLKHPSFKANSSSWWNVKVPGKWEDYRFTIFVLLFLERLLWTWSFVFPCRLLQANLQMCQVSLWERNKLRLSEEQVLADRFSSDELVSCEII
Homology
[Close]
BLAST of Cla97C03G062770 vs. NCBI nr
Match: KAA0031794.1 (hypothetical protein E6C27_scaffold848G00350 [Cucumis melo var. makuwa])

HSP 1 Score: 56.2 bits (134), Expect = 2.3e-04
Identity = 32/78 (41.03%), Postives = 41/78 (52.56%), Query Frame = 0 

Query: 28  SPFRSENMLLKHPSFKANSSSWWNVKVPGKWEDYRFTIFVLLFLERLLWTWSFVFPCRLL 87
           SPF  ENM L+HPSF AN S WW+  V G+WE +RF      F+E+L          R L
Sbjct: 189 SPFCFENMWLEHPSFNANLSFWWSTMVQGRWEGFRFR-----FMEKL----------RAL 246

Query: 88  QANLQMCQVSLWERNKLR 106
           + NL+     +W R   R
Sbjct: 249 KGNLK-----VWSREAFR 246

[Close]
BLAST of Cla97C03G062770 vs. ExPASy TrEMBL
Match: A0A5A7SKV1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold848G00350 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.1e-04
Identity = 32/78 (41.03%), Postives = 41/78 (52.56%), Query Frame = 0 

Query: 28  SPFRSENMLLKHPSFKANSSSWWNVKVPGKWEDYRFTIFVLLFLERLLWTWSFVFPCRLL 87
           SPF  ENM L+HPSF AN S WW+  V G+WE +RF      F+E+L          R L
Sbjct: 189 SPFCFENMWLEHPSFNANLSFWWSTMVQGRWEGFRFR-----FMEKL----------RAL 246

Query: 88  QANLQMCQVSLWERNKLR 106
           + NL+     +W R   R
Sbjct: 249 KGNLK-----VWSREAFR 246

The following BLAST results are available for this feature:
BLAST of Cla97C03G062770 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0031794.12.3e-0441.03hypothetical protein E6C27_scaffold848G00350 [Cucumis melo var. makuwa][more]
BLAST of Cla97C03G062770 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cla97C03G062770 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7SKV11.1e-0441.03Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
BLAST of Cla97C03G062770 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C03G062770.1Cla97C03G062770.1mRNA