Cla97C03G061390 (gene) Watermelon (97103) v2.5

Overview
NameCla97C03G061390
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionUnknown protein
LocationCla97Chr03: 18688782 .. 18689404 (+)
RNA-Seq ExpressionCla97C03G061390
SyntenyCla97C03G061390
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGAGGCTGAAAATGGTATAACTGTTGGAAGAAGCGGTCCGAAGGTGAGGGTAAAGGGAATGACCACGCTTTATGAGACGCGTGAGAGACATTCGCTTGGGTCATCCACCCACTTTGTTCTTACAGATTCACTTCTCTTTGCACTTCCACCACTGAAAAAGAAAAAGGCTAAAATGTTAGCAGGAATCTGATGAACGTGGCGGAACCAAAGAGAGAGTTAGCTTCAATTCCTGTAATCGCGAGAGTCTTCAAATCTTCGTCGTCCGTTTTACCTCTCCAAAAATCGTCAGCAACAATGGAGGGACGGATGTTTTGGTTGGTTTCGTTACTCTTTTCTCTCTCTTTTTAGTTTTTTTGTGTGGAGAGGAGAAGACAACGCCCCTTTCTCTCTTTCTTTCTCTATCTCTCTCTCTCTAGAAAAAATAACCCACTTACACAATCCTCAATCAATCCCATATACATAAACTTTTCCTTTCCCTTTCTCTGTTTTTCCCCCTTTTTTTTTGTGTGTGTTTTGGTTTTTGGAAAGGAATTTGGATGGTGGGTTTTTGATTTGATCCAAATTGCTGCTCTGCAACTGGTGGGTTGTGGTGGAAATGGGGATTTGGGTGGTGGGTTTTGA

mRNA sequence

AAAGAGGCTGAAAATGGTATAACTGTTGGAAGAAGCGGTCCGAAGGAATCTGATGAACGTGGCGGAACCAAAGAGAGAGTTAGCTTCAATTCCTGTAATCGCGAGAGTCTTCAAATCTTCGTCGTCCGTTTTACCTCTCCAAAAATCGTCAGCAACAATGGAGGGACGGATGTTTTGGAATTTGGATGGTGGGTTTTTGATTTGATCCAAATTGCTGCTCTGCAACTGGTGGGTTGTGGTGGAAATGGGGATTTGGGTGGTGGGTTTTGA

Coding sequence (CDS)

AAAGAGGCTGAAAATGGTATAACTGTTGGAAGAAGCGGTCCGAAGGAATCTGATGAACGTGGCGGAACCAAAGAGAGAGTTAGCTTCAATTCCTGTAATCGCGAGAGTCTTCAAATCTTCGTCGTCCGTTTTACCTCTCCAAAAATCGTCAGCAACAATGGAGGGACGGATGTTTTGGAATTTGGATGGTGGGTTTTTGATTTGATCCAAATTGCTGCTCTGCAACTGGTGGGTTGTGGTGGAAATGGGGATTTGGGTGGTGGGTTTTGA

Protein sequence

KEAENGITVGRSGPKESDERGGTKERVSFNSCNRESLQIFVVRFTSPKIVSNNGGTDVLEFGWWVFDLIQIAALQLVGCGGNGDLGGGF
Homology
[Close]
BLAST of Cla97C03G061390 vs. NCBI nr
Match: KAG7022202.1 (hypothetical protein SDJN02_15932, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 100.9 bits (250), Expect = 5.8e-18
Identity = 55/76 (72.37%), Postives = 59/76 (77.63%), Query Frame = 0 

Query: 15  KESDERGGTKERVSFNSCNRESLQIFVVRFTSPKIVSNNGGTDVL-EFGWWVFDLIQIAA 74
           +ES ERGGTK RV   S NRESL IFVVRF+SP IVSNNGG DVL E   WVFDLI I A
Sbjct: 114 EESVERGGTKARVITKSFNRESLLIFVVRFSSPIIVSNNGGMDVLKEIRLWVFDLIGIGA 173

Query: 75  LQLVGCGGNGDLGGGF 90
           L++V CGGNGDL GGF
Sbjct: 174 LEVVDCGGNGDLVGGF 189

[Close]
BLAST of Cla97C03G061390 vs. NCBI nr
Match: XP_038880401.1 (uncharacterized protein LOC120072050 [Benincasa hispida])

HSP 1 Score: 66.2 bits (160), Expect = 1.6e-07
Identity = 29/31 (93.55%), Postives = 30/31 (96.77%), Query Frame = 0 

Query: 58  VLEFGWWVFDLIQIAALQLVGCGGNGDLGGG 89
           VL FGWWVFDLIQIAALQL+GCGGNGDLGGG
Sbjct: 161 VLVFGWWVFDLIQIAALQLLGCGGNGDLGGG 191

The following BLAST results are available for this feature:
BLAST of Cla97C03G061390 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7022202.15.8e-1872.37hypothetical protein SDJN02_15932, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_038880401.11.6e-0793.55uncharacterized protein LOC120072050 [Benincasa hispida][more]
BLAST of Cla97C03G061390 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cla97C03G061390 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cla97C03G061390 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C03G061390.1Cla97C03G061390.1mRNA