Cla97C03G058330 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C03G058330
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	60S ribosomal protein L18a-like protein
Location	Cla97Chr03: 7691083 .. 7695621 (+)
RNA-Seq Expression	Cla97C03G058330
Synteny	Cla97C03G058330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCGTGAGAAACGAAATGGGGCTCCAATTCCGCCGCCCGGGTTGAGTACAAACTGCCAGCTGTACAACTTCAATTCACCAAAGTCAGAAAATCACCGCCTTATTAGAAACCGGAGACACTCATTCTCTTTCCGCCAAGCTCCGTCGCTTCCAAATTTCCCGGCGAAATCGCAGACGAAGAAGAGAAAAGCGACGACGACACCCTCGCCGTCGCCTTGGTATTCAAGAAACCTTCTCTAATTCTTCTTCTGCAGATAATATGACTGGCGACGGGAAAAGCAGCGCGGTATTTGGCGATCCACAGACTCAATACCATTACGGTACGTTTCAAGGTGTCGCAAACTATTATTCTTCTGCCCCACAACCGCAGCCCCAATCTGTCGTCGGTTTCCCTCAGCCGGTTGCACCGCCCGCAGTTTCTGGCCACCATCCATGTTACCATGGACATTTGGGTTACCAAGCCGTTCCTGGTAAATAACTCCATTCGTCGATGTTCTTTTTATCATGTTCTTCAATTTGGAGGATTTTGTTATGGTATGATTTCTGGTAGATTGATGACGAATTCAGAATCTAAAGATCAATATCGTGGTTCTTCCTAGGAGTTTGTGCAGATTTTGCGTTTAAATATTAGTTTGAAGGGCGGATACGAATTGTTTACTTTATTTAGGGATTGACGGTGTTTCGTATGGTCTTTGCTAATGATCATGACGGTTTTGCTTTGTTATTGGTATCCGTTGGTTTGATAAGTATTAAATGAGTCTATGATGCTCATTGTGGTTTATAATTGATTTGCTTTATCTGATGTTCCGGGCCTCAGATGGGTTATTGATTCACTGATATGAATGTATGAATAATATCTCAATGTTTAGATTGAATATCGCCCTTAGTAATGTCTAGCGTCGTGAGAAATAAGGTTAAAAGTTATGTTCAGGATTAATAGGGAGTCGGGGACTGCTTTCTAGCTTATGACAATTTATTTGGGAACAAGGAACATTTTCTAAATGCATGAGGATTTGCAAGAGAGAAAGGAGGAGAGAGATTGAGTTTGCTACCCTCTTTGTCAATGGTGATTACAAAGTTCTGATCGACTTGAATTTTATTAGAAGAACAATTGCAGAACTCTCTGCTTTGAAATTACCTGTACCATCTAGCTTCCAAAACTAGAGTGCTCCCTTAAAAATTTAACACATCTTCGAACTTAATTGTTCTAATGGTCCCTTTCATTCCACATCTCAATTCTTCCATATTTAGCATGGAATTCTCCCGAAGATTATGGAGAAGGGTGGTCTCTTGAGCGTGCATAATCACTTATTTTCTGCATCTAAGGCATCTAGGGAAATATCCTAGTAGAGAGAGAAGAGTCTAAGGAGATATCTGAAGAAGGCCTGTCCTTGGATGGTGGCTAATCTAACTAATTGGAAGACAGTGTCTCTTCAGCTGGAGGATGGTCTGGATGTTACTAGAGCCATTTAATGGGATGTATTGTTAGAGAGAACGGAAGAGTCTTTTCAATTGAGGAAAAGATTGTTGGAAAACTGTGTTTTTGTTTCCTTCTCATGTAGAGCCTTGCACGAGGTCTTCTCGAATTATTCTCTTTACATGGTTGGTGCCAATGGGGGAGTTCCTCTTGTTCTTTCCCCTATTTTCCCTTTCCAACTCTTTTTGCTTGTAGGCACTTGCCTTATAATGATGGTCCAAAAGCAGCTGGATCATCAAATCTCATTTATTATTTAGGGAGGGCCCGTTGGAAATTAAAAGAACTTGAGTAGTTCCATTACCACTTTTTGGAAGGCCCACACATCATGGATTCATGATGACCTGTATCCTGAGCTTCATTACTGTTCTTGCATCACATGTAATGATGCACCAAGTATCGTAAATACTCATATTCCCCCCCCACCCCCGGGATTGCTTAGAATGTGTTTATCAAGAAAGAAATGGACTGTAGTTGCTCAATGCTCCCAATTTAAACAGCGTATAAATTTCCTCCTTCAATTTTATTTTTGGTAGAACTGACTATTGAGATTAAATCACAAAAGTGAAAGGGGTATCACTTGCCAGATATTTCTATCAACATGTCTTCCTAGTGAGATGTATCACCCAGCATCTTGCCCATTGCAAGTATTCTCCAAATCAGTGACAATAAGATTCTGTAATTCAGTTGCTTAATATTATTGAGGTTAATTAAAGATGGACGTTGAAATTTCAATGCCTTGTTCTTAGATTATATTGCAAGATTATCAATCATGTCATCTGAGGTAAAATGAGCAGCATATAGATTCCATTTGAAGAGTGTCACTGTCAGTTATGGACCGTGGTTTGGCATGTCAATTAGGTAGGATGTCTGCACGACAATCTATTTCTCATGCTTCTAGGAAAAGCCTTACAACACATGTCTATCGTGTCACCTAATGATTTGGTTGGTTCATGTAAATTCTATGCAAGTGTCCATTTTTAACCGGTTGGCTAATTTCGTTTGTAGAGTGACAGTTACGGACAGTGTTATGAACTTTGGAATATGGTTTTGGCATGCCAATTAGACAGGATGTCTGCTAAATAATCTATTTCTCATGGTTCCAGGAAGCGATGTTCACCTCATGATTTGGTTCGTTCATGTTAAACCTATGCAAGCATCTAATCTATTTTTAATTTTCTAATGAAATAACTTCTGAAAAAACTCAAAAGTTTAATTCGGTCAACCATGCACGTGTTTATTTATGGGCGCATATGCATATGAATTTACATCTTTATGCAGTCATGCTCAATGGTACGGATGCCTTTATCCATCATCCGCCTTAATGCTTTTATTGGTTGTGGTTCAAGGTTATGCCATTCTTGAGGGAAGACCTTTTCAAGAAGCCCGTCTTCCTTGCTGTGGCATTGGCATGGGTTGGTTCTTGTAAGTTAATATTGTGACATCCCACTTCTCTACACTCATTCCCAACATGTTGATAATTAAGAAAAATCATTGTTTTGCCAGGTTTATGATTGGCTTCTTTCTTGGTGGCATTCCCTGGTATGTTGGAGCTTTTATCGTACTCTTTGTTCGGGTGGATTACCGAGAAAAACCTGGATATGTTGCATGTGCAATTGCTGTAAGTAACCATTATACAAATATGATTTATCATTAACTATCCTCAAAAATATGATTTCTCACCTATCTTCAATAATAATTATACTATTACTCCAAGTAGTACTCAAAATGATGAAGATTTGGGACGTTTTGAGACGTTCTCTAGTCTTGGGTTCAAGGAAAATTTATTAATTATTAACTGCTTTTAAAGCTGACCCAAGAATTTATGGAGGTGGGAAATGAGCATATACTAATATACTGATATGAGTGAGGAGTTGAGCATCCAACAATTTGCTTCAAATTAAATAAGGGCAAATATCAATTTGTACCCCTAAACTTTTGGAGTTATATCAATTGGAACTTTGAACTAACAATTGTATTAATTTAAACTCCGAACTTTTGTAACTGTATCCATTTACACCTCCATTATGTTTCATTTGGAAAAACTTTATGTGAAACTTAATTGTATTAATTAAACCCCTACCCTTTCATCAATGAATCAATTTAGACCCTTAGACAGAATTTCCTTTGAAAATCGTCGTGCATGCATTACACTCCGATTTGTTAAAGGGACATATGAAGAAGTCTGCACATTTGAGAATTAATGCATGGATGGTTTTCAAATGTAATCATAATGGAAGGTTTAAATTAGTTGACTTAGGAAAATTTTGGAATTTAATTGACTCAAGTTATAAGTTTCACACGATATTAGCCAAACGTGGTGGAGAGTGTAAATTGATTCACTTAACAAAGTTTAGGGTTTAAAATGAGACAATTATTAGTTCAAGGTTTAAATTAATACAACTCCTAAAGTTTAGGAGATAAGTTGATATTTGCCTAATTAATAATTATGAAAAACCTGAAAATTGACCCTAATTTTATCCTCAGCTGGAAGTTTTAGGCCCCCATTCTGCCTGCTGTTCCCTTTTCTTGGACTTGATTGTGTGCTGCTAGGATGTTACGATTTCCATCTACTGATTTTGAAATTGTGCTTCATTTTTGCTTGCTCAGTCAGTTCTTGCCGTCGTTGCTATTACGTTTGGGATCACCAAAGGAGTTGACCCCTGGTGAATGAGACATATGCAGAATGGTCTGGCTTGCCGTGTCACCCCCCTGCATCGACGAAAACAACGGTTGGGATACTGTAATTAGCTTTGAAATTGTTATTCTGTCAGCTTCTATTTATCAACTTATTGGCTTCCTTTACCATATACCGACATCTTCCTGACTTGCCAAATATGGAATGAAATGTTAATAGATCGAAGTCAAAATTATTAGCTTTATTGGAAGGTTTTTTCTCTTTTCTTTTTAGTTTTAAATAGCTATAAGTGTCAGGATCAGTTTGTACATGTCTCAGTCATTCTTATAAGACAATCACTCGATTCTATTATATTTGGTTGTCAAATAGACCTATGTTTTGAACCTATTTCCTCTAAATGAGGGCCAGTAGGCTTTATTCGGCCA

mRNA sequence

ATGTCCAAAATCACCGCCTTATTAGAAACCGGAGACACTCATTCTCTTTCCGCCAAGCTCCGTCGCTTCCAAATTTCCCGGCGAAATCGCAGACGAAGAAGAGAAAAGCGACGACGACACCCTCGCCGTCGCCTTGGTATTCAAGAAACCTTCTCTAATTCTTCTTCTGCAGATAATATGACTGGCGACGGGAAAAGCAGCGCGGTATTTGGCGATCCACAGACTCAATACCATTACGGTACGTTTCAAGGTGTCGCAAACTATTATTCTTCTGCCCCACAACCGCAGCCCCAATCTGTCGTCGGTTTCCCTCAGCCGGTTGCACCGCCCGCAGTTTCTGGCCACCATCCATGTTACCATGGACATTTGGGTTACCAAGCCGTTCCTGGGATTGACGGTGTTTCAGCCTTGCACGAGGTCTTCTCGAATTATTCTCTTTACATGGTTGGTGCCAATGGGGGAGTTCCTCTTGTTCTTTCCCCTATTTTCCCTTTCCAACTCTTTTTGCTTATATTTCTATCAACATGTCTTCCTAGTGAGATGTATCACCCAGCATCTTGCCCATTGCAAATTATATTGCAAGATTATCAATCATGTCATCTGAGTCATGCTCAATGGTACGGATGCCTTTATCCATCATCCGCCTTAATGCTTTTATTGGTTGTGGTTCAAGGTTATGCCATTCTTGAGGGAAGACCTTTTCAAGAAGCCCGTCTTCCTTGCTGTGGCATTGGCATGGGTTGGTTCTTGTTTATGATTGGCTTCTTTCTTGGTGGCATTCCCTGGTATGTTGGAGCTTTTATCGTACTCTTTGTTCGGGTGGATTACCGAGAAAAACCTGGATATGTTGCATGTGCAATTGCTTCAGTTCTTGCCGTCGTTGCTATTACGTTTGGGATCACCAAAGGAGTTGACCCCTGGTGAATGAGACATATGCAGAATGGTCTGGCTTGCCGTGTCACCCCCCTGCATCGACGAAAACAACGGTTGGGATACTGTAATTAGCTTTGAAATTGTTATTCTGTCAGCTTCTATTTATCAACTTATTGGCTTCCTTTACCATATACCGACATCTTCCTGACTTGCCAAATATGGAATGAAATGTTAATAGATCGAAGTCAAAATTATTAGCTTTATTGGAAGGTTTTTTCTCTTTTCTTTTTAGTTTTAAATAGCTATAAGTGTCAGGATCAGTTTGTACATGTCTCAGTCATTCTTATAAGACAATCACTCGATTCTATTATATTTGGTTGTCAAATAGACCTATGTTTTGAACCTATTTCCTCTAAATGAGGGCCAGTAGGCTTTATTCGGCCA

Coding sequence (CDS)

ATGTCCAAAATCACCGCCTTATTAGAAACCGGAGACACTCATTCTCTTTCCGCCAAGCTCCGTCGCTTCCAAATTTCCCGGCGAAATCGCAGACGAAGAAGAGAAAAGCGACGACGACACCCTCGCCGTCGCCTTGGTATTCAAGAAACCTTCTCTAATTCTTCTTCTGCAGATAATATGACTGGCGACGGGAAAAGCAGCGCGGTATTTGGCGATCCACAGACTCAATACCATTACGGTACGTTTCAAGGTGTCGCAAACTATTATTCTTCTGCCCCACAACCGCAGCCCCAATCTGTCGTCGGTTTCCCTCAGCCGGTTGCACCGCCCGCAGTTTCTGGCCACCATCCATGTTACCATGGACATTTGGGTTACCAAGCCGTTCCTGGGATTGACGGTGTTTCAGCCTTGCACGAGGTCTTCTCGAATTATTCTCTTTACATGGTTGGTGCCAATGGGGGAGTTCCTCTTGTTCTTTCCCCTATTTTCCCTTTCCAACTCTTTTTGCTTATATTTCTATCAACATGTCTTCCTAGTGAGATGTATCACCCAGCATCTTGCCCATTGCAAATTATATTGCAAGATTATCAATCATGTCATCTGAGTCATGCTCAATGGTACGGATGCCTTTATCCATCATCCGCCTTAATGCTTTTATTGGTTGTGGTTCAAGGTTATGCCATTCTTGAGGGAAGACCTTTTCAAGAAGCCCGTCTTCCTTGCTGTGGCATTGGCATGGGTTGGTTCTTGTTTATGATTGGCTTCTTTCTTGGTGGCATTCCCTGGTATGTTGGAGCTTTTATCGTACTCTTTGTTCGGGTGGATTACCGAGAAAAACCTGGATATGTTGCATGTGCAATTGCTTCAGTTCTTGCCGTCGTTGCTATTACGTTTGGGATCACCAAAGGAGTTGACCCCTGGTGA

Protein sequence

MSKITALLETGDTHSLSAKLRRFQISRRNRRRRREKRRRHPRRRLGIQETFSNSSSADNMTGDGKSSAVFGDPQTQYHYGTFQGVANYYSSAPQPQPQSVVGFPQPVAPPAVSGHHPCYHGHLGYQAVPGIDGVSALHEVFSNYSLYMVGANGGVPLVLSPIFPFQLFLLIFLSTCLPSEMYHPASCPLQIILQDYQSCHLSHAQWYGCLYPSSALMLLLVVVQGYAILEGRPFQEARLPCCGIGMGWFLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVVAITFGITKGVDPW

Homology

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BLAST of Cla97C03G058330 vs. NCBI nr
Match: XP_038895475.1 (60S ribosomal protein L18a-like protein [Benincasa hispida])

HSP 1 Score: 264.6 bits (675), Expect = 1.0e-66
Identity = 142/248 (57.26%), Postives = 148/248 (59.68%), Query Frame = 0


Query: 60  MTGDGKSSAVFGDPQTQYHYGTFQGVANYYSSAPQPQPQSVVGFPQPVAPPAVSGHHPCY 119
           M+GDGKSSAVFGDPQ+QYHYGTFQGVANYYSSAPQ QPQS VGFPQPV P  VSGHHPCY
Sbjct: 1   MSGDGKSSAVFGDPQSQYHYGTFQGVANYYSSAPQAQPQSFVGFPQPVTPSGVSGHHPCY 60

Query: 120 HGHLGYQAVPGIDGVSALHEVFSNYSLYMVGANGGVPLVLSPIFPFQLFLLIFLSTCLPS 179
           HGHLGYQAVP                                                  
Sbjct: 61  HGHLGYQAVP-------------------------------------------------- 120

Query: 180 EMYHPASCPLQIILQDYQSCHLSHAQWYGCLYPSSALMLLLVVVQGYAILEGRPFQEARL 239
                                                      VQGYAI+E RPF+EARL
Sbjct: 121 -------------------------------------------VQGYAIIERRPFEEARL 155

Query: 240 PCCGIGMGWFLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVVAITFG 299
           PCCGIGMGWFLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAV+AITFG
Sbjct: 181 PCCGIGMGWFLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFG 155

Query: 300 ITKGVDPW 308
           IT GV+PW
Sbjct: 241 ITNGVEPW 155

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BLAST of Cla97C03G058330 vs. NCBI nr
Match: XP_008444018.1 (PREDICTED: 60S ribosomal protein L18a-like protein [Cucumis melo])

HSP 1 Score: 263.8 bits (673), Expect = 1.8e-66
Identity = 144/252 (57.14%), Postives = 149/252 (59.13%), Query Frame = 0


Query: 60  MTGDGKSSAVFGDPQTQYHYGTFQGVANYYSS----APQPQPQSVVGFPQPVAPPAVSGH 119
           M+GDGKSS VFGDP +QYHYGTFQGVANYY+S     PQPQPQSVVGFPQPVAPP VSGH
Sbjct: 1   MSGDGKSSVVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAPPVVSGH 60

Query: 120 HPCYHGHLGYQAVPGIDGVSALHEVFSNYSLYMVGANGGVPLVLSPIFPFQLFLLIFLST 179
            PCYHGHLGYQAVP                                              
Sbjct: 61  QPCYHGHLGYQAVP---------------------------------------------- 120

Query: 180 CLPSEMYHPASCPLQIILQDYQSCHLSHAQWYGCLYPSSALMLLLVVVQGYAILEGRPFQ 239
                                                          VQGYAILEGRPFQ
Sbjct: 121 -----------------------------------------------VQGYAILEGRPFQ 159

Query: 240 EARLPCCGIGMGWFLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVVA 299
           EARLPCCGIGMGWFLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAV+A
Sbjct: 181 EARLPCCGIGMGWFLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIA 159

Query: 300 ITFGITKGVDPW 308
           ITFGIT GV+PW
Sbjct: 241 ITFGITNGVEPW 159

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BLAST of Cla97C03G058330 vs. NCBI nr
Match: XP_004147407.1 (60S ribosomal protein L18a-like protein [Cucumis sativus] >KGN65566.1 hypothetical protein Csa_019751 [Cucumis sativus])

HSP 1 Score: 259.6 bits (662), Expect = 3.4e-65
Identity = 142/252 (56.35%), Postives = 148/252 (58.73%), Query Frame = 0


Query: 60  MTGDGKSSAVFGDPQTQYHYGTFQGVANYYSS----APQPQPQSVVGFPQPVAPPAVSGH 119
           M+GDGKS+ VFGDP +QYHYGTFQGVANYY+S     PQPQPQSVVGFPQPVA P VSGH
Sbjct: 1   MSGDGKSNVVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAQPVVSGH 60

Query: 120 HPCYHGHLGYQAVPGIDGVSALHEVFSNYSLYMVGANGGVPLVLSPIFPFQLFLLIFLST 179
            PCYHGHLGYQAVP                                              
Sbjct: 61  QPCYHGHLGYQAVP---------------------------------------------- 120

Query: 180 CLPSEMYHPASCPLQIILQDYQSCHLSHAQWYGCLYPSSALMLLLVVVQGYAILEGRPFQ 239
                                                          VQGYAILEGRPFQ
Sbjct: 121 -----------------------------------------------VQGYAILEGRPFQ 159

Query: 240 EARLPCCGIGMGWFLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVVA 299
           EARLPCCGIGMGWFLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAV+A
Sbjct: 181 EARLPCCGIGMGWFLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIA 159

Query: 300 ITFGITKGVDPW 308
           ITFGIT GV+PW
Sbjct: 241 ITFGITNGVEPW 159

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BLAST of Cla97C03G058330 vs. NCBI nr
Match: KAG7019534.1 (60S ribosomal protein L18a-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 254.2 bits (648), Expect = 1.4e-63
Identity = 142/252 (56.35%), Postives = 161/252 (63.89%), Query Frame = 0


Query: 60  MTGDGKSSAVFGDPQTQYHYGTFQGVANYYSSAPQPQ----PQSVVGFPQPVAPPAVSGH 119
           M+GDGKSSAVFGDPQ+QYHYGTFQGVANYYSSAP+PQ    PQSVVGFP  VAPP     
Sbjct: 1   MSGDGKSSAVFGDPQSQYHYGTFQGVANYYSSAPEPQPQPHPQSVVGFPPQVAPP----R 60

Query: 120 HPCYHGHLGYQAVPGIDGVSALHEVFSNYSLYMVGANGGVPLVLSPIFPFQLFLLIFLST 179
           HPCYHGHL YQAVPG                                             
Sbjct: 61  HPCYHGHLDYQAVPG--------------------------------------------- 120

Query: 180 CLPSEMYHPASCPLQIILQDYQSCHLSHAQWYGCLYPSSALMLLLVVVQGYAILEGRPFQ 239
           CL   ++        ++L +    H+S       + P+     L+   QGYAI+EGRPF 
Sbjct: 121 CLLDNLF--------LVLPENALQHMS------IVSPND----LVSSFQGYAIIEGRPFH 180

Query: 240 EARLPCCGIGMGWFLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVVA 299
           EARLPCCGIGMGWFLFMIGFFLGGIPWYVGAF+VLFVRVDYREKPGY+ACAIASVLAV+A
Sbjct: 181 EARLPCCGIGMGWFLFMIGFFLGGIPWYVGAFVVLFVRVDYREKPGYIACAIASVLAVMA 185

Query: 300 ITFGITKGVDPW 308
           ITFG++KGV+ W
Sbjct: 241 ITFGVSKGVEIW 185

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BLAST of Cla97C03G058330 vs. NCBI nr
Match: XP_022140257.1 (60S ribosomal protein L18a-like protein [Momordica charantia])

HSP 1 Score: 248.8 bits (634), Expect = 6.0e-62
Identity = 137/252 (54.37%), Postives = 146/252 (57.94%), Query Frame = 0


Query: 60  MTGDGKSSAVFGDPQTQYHYGTFQGVANYYSSA----PQPQPQSVVGFPQPVAPPAVSGH 119
           M+GDGK+SAV GDPQ+QYHYGTFQGVANYY SA    PQPQP SVVGFPQPVAPP VSG 
Sbjct: 1   MSGDGKNSAVLGDPQSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGP 60

Query: 120 HPCYHGHLGYQAVPGIDGVSALHEVFSNYSLYMVGANGGVPLVLSPIFPFQLFLLIFLST 179
           HP YHGHLGYQAVP                                              
Sbjct: 61  HPYYHGHLGYQAVP---------------------------------------------- 120

Query: 180 CLPSEMYHPASCPLQIILQDYQSCHLSHAQWYGCLYPSSALMLLLVVVQGYAILEGRPFQ 239
                                                          VQGYAI+EGRP+Q
Sbjct: 121 -----------------------------------------------VQGYAIIEGRPYQ 159

Query: 240 EARLPCCGIGMGWFLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVVA 299
           EARLPCCGIGMGWFLF+IGFFLGGIPWYVGAFIVLFVRVDYREKPGYVAC IASVLA+VA
Sbjct: 181 EARLPCCGIGMGWFLFVIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVA 159

Query: 300 ITFGITKGVDPW 308
           ITFG+TKG + W
Sbjct: 241 ITFGVTKGAESW 159

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BLAST of Cla97C03G058330 vs. ExPASy Swiss-Prot
Match: Q8L9S1 (60S ribosomal protein L18a-like protein OS=Arabidopsis thaliana OX=3702 GN=At1g29970 PE=2 SV=2)

HSP 1 Score: 118.2 bits (295), Expect = 1.6e-25
Identity = 52/87 (59.77%), Postives = 67/87 (77.01%), Query Frame = 0


Query: 221 VVVQGYAILEGRPFQEARLPCCGIGMGWFLFMIGFFLGGIPWYVGAFIVLFVRVDYREKP 280
           VVV  Y ++E RP  E  LPCCG+GMGWFLF++GF  GGIPWY+GAFIVL   VD+REK 
Sbjct: 72  VVVPDYTVVEVRPMIEHELPCCGLGMGWFLFIMGFLFGGIPWYLGAFIVLVTSVDHREKA 131

Query: 281 GYVACAIASVLAVVAITFGITKGVDPW 308
           GYVAC+IASV+ ++A+  G+T  ++ W
Sbjct: 132 GYVACSIASVVYLIAVMLGMTGDINIW 158

[Close]

BLAST of Cla97C03G058330 vs. ExPASy TrEMBL
Match: A0A1S3B9D9 (60S ribosomal protein L18a-like protein OS=Cucumis melo OX=3656 GN=LOC103487462 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 8.7e-67
Identity = 144/252 (57.14%), Postives = 149/252 (59.13%), Query Frame = 0


Query: 60  MTGDGKSSAVFGDPQTQYHYGTFQGVANYYSS----APQPQPQSVVGFPQPVAPPAVSGH 119
           M+GDGKSS VFGDP +QYHYGTFQGVANYY+S     PQPQPQSVVGFPQPVAPP VSGH
Sbjct: 1   MSGDGKSSVVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAPPVVSGH 60

Query: 120 HPCYHGHLGYQAVPGIDGVSALHEVFSNYSLYMVGANGGVPLVLSPIFPFQLFLLIFLST 179
            PCYHGHLGYQAVP                                              
Sbjct: 61  QPCYHGHLGYQAVP---------------------------------------------- 120

Query: 180 CLPSEMYHPASCPLQIILQDYQSCHLSHAQWYGCLYPSSALMLLLVVVQGYAILEGRPFQ 239
                                                          VQGYAILEGRPFQ
Sbjct: 121 -----------------------------------------------VQGYAILEGRPFQ 159

Query: 240 EARLPCCGIGMGWFLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVVA 299
           EARLPCCGIGMGWFLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAV+A
Sbjct: 181 EARLPCCGIGMGWFLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIA 159

Query: 300 ITFGITKGVDPW 308
           ITFGIT GV+PW
Sbjct: 241 ITFGITNGVEPW 159

[Close]

BLAST of Cla97C03G058330 vs. ExPASy TrEMBL
Match: A0A0A0M051 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G448970 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 1.6e-65
Identity = 142/252 (56.35%), Postives = 148/252 (58.73%), Query Frame = 0


Query: 60  MTGDGKSSAVFGDPQTQYHYGTFQGVANYYSS----APQPQPQSVVGFPQPVAPPAVSGH 119
           M+GDGKS+ VFGDP +QYHYGTFQGVANYY+S     PQPQPQSVVGFPQPVA P VSGH
Sbjct: 1   MSGDGKSNVVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAQPVVSGH 60

Query: 120 HPCYHGHLGYQAVPGIDGVSALHEVFSNYSLYMVGANGGVPLVLSPIFPFQLFLLIFLST 179
            PCYHGHLGYQAVP                                              
Sbjct: 61  QPCYHGHLGYQAVP---------------------------------------------- 120

Query: 180 CLPSEMYHPASCPLQIILQDYQSCHLSHAQWYGCLYPSSALMLLLVVVQGYAILEGRPFQ 239
                                                          VQGYAILEGRPFQ
Sbjct: 121 -----------------------------------------------VQGYAILEGRPFQ 159

Query: 240 EARLPCCGIGMGWFLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVVA 299
           EARLPCCGIGMGWFLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAV+A
Sbjct: 181 EARLPCCGIGMGWFLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIA 159

Query: 300 ITFGITKGVDPW 308
           ITFGIT GV+PW
Sbjct: 241 ITFGITNGVEPW 159

[Close]

BLAST of Cla97C03G058330 vs. ExPASy TrEMBL
Match: A0A6J1CGC1 (60S ribosomal protein L18a-like protein OS=Momordica charantia OX=3673 GN=LOC111010965 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 2.9e-62
Identity = 137/252 (54.37%), Postives = 146/252 (57.94%), Query Frame = 0


Query: 60  MTGDGKSSAVFGDPQTQYHYGTFQGVANYYSSA----PQPQPQSVVGFPQPVAPPAVSGH 119
           M+GDGK+SAV GDPQ+QYHYGTFQGVANYY SA    PQPQP SVVGFPQPVAPP VSG 
Sbjct: 1   MSGDGKNSAVLGDPQSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGP 60

Query: 120 HPCYHGHLGYQAVPGIDGVSALHEVFSNYSLYMVGANGGVPLVLSPIFPFQLFLLIFLST 179
           HP YHGHLGYQAVP                                              
Sbjct: 61  HPYYHGHLGYQAVP---------------------------------------------- 120

Query: 180 CLPSEMYHPASCPLQIILQDYQSCHLSHAQWYGCLYPSSALMLLLVVVQGYAILEGRPFQ 239
                                                          VQGYAI+EGRP+Q
Sbjct: 121 -----------------------------------------------VQGYAIIEGRPYQ 159

Query: 240 EARLPCCGIGMGWFLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVVA 299
           EARLPCCGIGMGWFLF+IGFFLGGIPWYVGAFIVLFVRVDYREKPGYVAC IASVLA+VA
Sbjct: 181 EARLPCCGIGMGWFLFVIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVA 159

Query: 300 ITFGITKGVDPW 308
           ITFG+TKG + W
Sbjct: 241 ITFGVTKGAESW 159

[Close]

BLAST of Cla97C03G058330 vs. ExPASy TrEMBL
Match: A0A6J1EHH7 (60S ribosomal protein L18a-like protein OS=Cucurbita moschata OX=3662 GN=LOC111434348 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 3.5e-60
Identity = 135/252 (53.57%), Postives = 145/252 (57.54%), Query Frame = 0


Query: 60  MTGDGKSSAVFGDPQTQYHYGTFQGVANYYSSAPQPQ----PQSVVGFPQPVAPPAVSGH 119
           M+GDGKSSAVFGDPQ+QYHYGTFQGVANYYSSAP+PQ    PQSVVGFP  VAPP     
Sbjct: 1   MSGDGKSSAVFGDPQSQYHYGTFQGVANYYSSAPEPQPQPHPQSVVGFPPQVAPP----R 60

Query: 120 HPCYHGHLGYQAVPGIDGVSALHEVFSNYSLYMVGANGGVPLVLSPIFPFQLFLLIFLST 179
           HPCYHGHL YQAVP                                              
Sbjct: 61  HPCYHGHLDYQAVP---------------------------------------------- 120

Query: 180 CLPSEMYHPASCPLQIILQDYQSCHLSHAQWYGCLYPSSALMLLLVVVQGYAILEGRPFQ 239
                                                          VQGYAI+EGRPF 
Sbjct: 121 -----------------------------------------------VQGYAIIEGRPFH 155

Query: 240 EARLPCCGIGMGWFLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVVA 299
           EARLPCCGIGMGWFLFMIGFFLGGIPWYVGAF+VLFVRVDYREKPGY+ACAIASVLAV+A
Sbjct: 181 EARLPCCGIGMGWFLFMIGFFLGGIPWYVGAFVVLFVRVDYREKPGYIACAIASVLAVMA 155

Query: 300 ITFGITKGVDPW 308
           ITFG++KGV+ W
Sbjct: 241 ITFGVSKGVEIW 155

[Close]

BLAST of Cla97C03G058330 vs. ExPASy TrEMBL
Match: A0A6J1KIR0 (60S ribosomal protein L18a-like protein OS=Cucurbita maxima OX=3661 GN=LOC111495603 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 1.7e-59
Identity = 135/252 (53.57%), Postives = 144/252 (57.14%), Query Frame = 0


Query: 60  MTGDGKSSAVFGDPQTQYHYGTFQGVANYYSSAPQPQ----PQSVVGFPQPVAPPAVSGH 119
           M+ DGKSSAVFGDPQ+QYHYGTFQGVANYYSSAPQPQ    PQSVVGFP  VAPP     
Sbjct: 1   MSCDGKSSAVFGDPQSQYHYGTFQGVANYYSSAPQPQPQPHPQSVVGFPPQVAPP----R 60

Query: 120 HPCYHGHLGYQAVPGIDGVSALHEVFSNYSLYMVGANGGVPLVLSPIFPFQLFLLIFLST 179
           HPCYHGHL YQAVP                                              
Sbjct: 61  HPCYHGHLDYQAVP---------------------------------------------- 120

Query: 180 CLPSEMYHPASCPLQIILQDYQSCHLSHAQWYGCLYPSSALMLLLVVVQGYAILEGRPFQ 239
                                                          VQGYAI+EGRPF 
Sbjct: 121 -----------------------------------------------VQGYAIIEGRPFH 155

Query: 240 EARLPCCGIGMGWFLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVVA 299
           EARLPCCGIGMGWFLFMIGFFLGGIPWYVGAF+VLFVRVDYREKPGY+ACAIASVLAV+A
Sbjct: 181 EARLPCCGIGMGWFLFMIGFFLGGIPWYVGAFVVLFVRVDYREKPGYIACAIASVLAVMA 155

Query: 300 ITFGITKGVDPW 308
           ITFG++KGV+ W
Sbjct: 241 ITFGVSKGVEIW 155

[Close]

BLAST of Cla97C03G058330 vs. TAIR 10
Match: AT1G17080.1 (Ribosomal protein L18ae family )

HSP 1 Score: 126.7 bits (317), Expect = 3.2e-29
Identity = 52/81 (64.20%), Postives = 68/81 (83.95%), Query Frame = 0


Query: 228 ILEGRPFQEARLPCCGIGMGWFLFMIGFFLGGIPWYVGAFIVLF-VRVDYREKPGYVACA 287
           + EGRP ++ RLPCCGIG+GWFLF++GFFLG IPWYVG FI++F  R+DYREKPGY+AC 
Sbjct: 74  VAEGRPVRQRRLPCCGIGLGWFLFIVGFFLGAIPWYVGLFIMMFGRRIDYREKPGYIACT 133

Query: 288 IASVLAVVAITFGITKGVDPW 308
           IA++LA +A+  G++KG D W
Sbjct: 134 IAAILATIAVILGVSKGADDW 154

[Close]

BLAST of Cla97C03G058330 vs. TAIR 10
Match: AT1G53560.1 (Ribosomal protein L18ae family )

HSP 1 Score: 119.8 bits (299), Expect = 3.9e-27
Identity = 51/85 (60.00%), Postives = 65/85 (76.47%), Query Frame = 0


Query: 223 VQGYAILEGRPFQEARLPCCGIGMGWFLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGY 282
           V GY + +GRP ++ RLPCCG+G+GWFLF+IGF LG IPWYVG FI++  R+D REKPGY
Sbjct: 68  VAGYPVSQGRPARQNRLPCCGLGLGWFLFIIGFLLGAIPWYVGVFILVCARIDPREKPGY 127

Query: 283 VACAIASVLAVVAITFGITKGVDPW 308
           VAC IA+V+A + I FG+  G   W
Sbjct: 128 VACTIAAVVATITIVFGVMGGRGVW 152

[Close]

BLAST of Cla97C03G058330 vs. TAIR 10
Match: AT1G29970.1 (60S ribosomal protein L18A-1 )

HSP 1 Score: 118.2 bits (295), Expect = 1.1e-26
Identity = 52/87 (59.77%), Postives = 67/87 (77.01%), Query Frame = 0


Query: 221 VVVQGYAILEGRPFQEARLPCCGIGMGWFLFMIGFFLGGIPWYVGAFIVLFVRVDYREKP 280
           VVV  Y ++E RP  E  LPCCG+GMGWFLF++GF  GGIPWY+GAFIVL   VD+REK 
Sbjct: 72  VVVPDYTVVEVRPMIEHELPCCGLGMGWFLFIMGFLFGGIPWYLGAFIVLVTSVDHREKA 131

Query: 281 GYVACAIASVLAVVAITFGITKGVDPW 308
           GYVAC+IASV+ ++A+  G+T  ++ W
Sbjct: 132 GYVACSIASVVYLIAVMLGMTGDINIW 158

[Close]

BLAST of Cla97C03G058330 vs. TAIR 10
Match: AT1G29970.2 (60S ribosomal protein L18A-1 )

HSP 1 Score: 103.6 bits (257), Expect = 2.9e-22
Identity = 46/68 (67.65%), Postives = 54/68 (79.41%), Query Frame = 0


Query: 221 VVVQGYAILEGRPFQEARLPCCGIGMGWFLFMIGFFLGGIPWYVGAFIVLFVRVDYREKP 280
           VVV  Y ++E RP  E  LPCCG+GMGWFLF++GF  GGIPWY+GAFIVL   VD+REK 
Sbjct: 72  VVVPDYTVVEVRPMIEHELPCCGLGMGWFLFIMGFLFGGIPWYLGAFIVLVTSVDHREKA 131

Query: 281 GYVACAIA 289
           GYVAC+IA
Sbjct: 132 GYVACSIA 139

[Close]

BLAST of Cla97C03G058330 vs. TAIR 10
Match: AT1G29970.3 (60S ribosomal protein L18A-1 )

HSP 1 Score: 97.8 bits (242), Expect = 1.6e-20
Identity = 52/129 (40.31%), Postives = 67/129 (51.94%), Query Frame = 0


Query: 221 VVVQGYAILEGRPFQEARLPCCGIGMGWFL------------------------------ 280
           VVV  Y ++E RP  E  LPCCG+GMGWFL                              
Sbjct: 72  VVVPDYTVVEVRPMIEHELPCCGLGMGWFLSKLQKLRFMVVGNSSLLSWNLFVSSEILDE 131

Query: 281 ------------FMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVVAITF 308
                       F++GF  GGIPWY+GAFIVL   VD+REK GYVAC+IASV+ ++A+  
Sbjct: 132 LIASWNQYKKSVFIMGFLFGGIPWYLGAFIVLVTSVDHREKAGYVACSIASVVYLIAVML 191

The following BLAST results are available for this feature:

BLAST of Cla97C03G058330 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895475.1	1.0e-66	57.26	60S ribosomal protein L18a-like protein [Benincasa hispida]	[more]
XP_008444018.1	1.8e-66	57.14	PREDICTED: 60S ribosomal protein L18a-like protein [Cucumis melo]	[more]
XP_004147407.1	3.4e-65	56.35	60S ribosomal protein L18a-like protein [Cucumis sativus] >KGN65566.1 hypothetic...	[more]
KAG7019534.1	1.4e-63	56.35	60S ribosomal protein L18a-like protein [Cucurbita argyrosperma subsp. argyrospe...	[more]
XP_022140257.1	6.0e-62	54.37	60S ribosomal protein L18a-like protein [Momordica charantia]	[more]

BLAST of Cla97C03G058330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9S1	1.6e-25	59.77	60S ribosomal protein L18a-like protein OS=Arabidopsis thaliana OX=3702 GN=At1g2...	[more]

BLAST of Cla97C03G058330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B9D9	8.7e-67	57.14	60S ribosomal protein L18a-like protein OS=Cucumis melo OX=3656 GN=LOC103487462 ...	[more]
A0A0A0M051	1.6e-65	56.35	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G448970 PE=4 SV=1	[more]
A0A6J1CGC1	2.9e-62	54.37	60S ribosomal protein L18a-like protein OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1EHH7	3.5e-60	53.57	60S ribosomal protein L18a-like protein OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1KIR0	1.7e-59	53.57	60S ribosomal protein L18a-like protein OS=Cucurbita maxima OX=3661 GN=LOC111495...	[more]

BLAST of Cla97C03G058330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G17080.1	3.2e-29	64.20	Ribosomal protein L18ae family	[more]
AT1G53560.1	3.9e-27	60.00	Ribosomal protein L18ae family	[more]
AT1G29970.1	1.1e-26	59.77	60S ribosomal protein L18A-1	[more]
AT1G29970.2	2.9e-22	67.65	60S ribosomal protein L18A-1	[more]
AT1G29970.3	1.6e-20	40.31	60S ribosomal protein L18A-1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..70
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..70
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..44
None	No IPR available	PANTHER	PTHR46631:SF20	60S RIBOSOMAL PROTEIN L18A-LIKE PROTEIN	coord: 60..132 coord: 222..307
IPR044804	AT1G29970-like	PANTHER	PTHR46631	60S RIBOSOMAL PROTEIN L18A-LIKE	coord: 60..132 coord: 222..307

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C03G058330.2	Cla97C03G058330.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005840	ribosome