Cla97C03G058240 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C03G058240
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	agamous-like MADS-box protein AGL29
Location	Cla97Chr03: 7557180 .. 7557710 (+)
RNA-Seq Expression	Cla97C03G058240
Synteny	Cla97C03G058240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAGGCGAAAAATCGAGATGAAAATGGTGAAGGATAGAGGTTCCAGACAAGTTACCTTTTCGAAGCGCCGAAACGGTCTGTTTAAGAAAGCGAACGATCTCGCTACTCTGTGCGGTTTAGAGATCGCGATTGTCGTCTTCTCTCCCGGCGGTAAGGCGTTCTCATTCGGCAATCCGAATGTTGAGGACGTCGTCGATCGATACCTAAATCGCGAATCGGAGGCGATTCAGATTCCGGCGGTGAGGGAGGGCGGAATTTTGGGGAAGGAGAATGAGGAACTGATCGATCTGGTTAAACAATTGCAAATGGAGAAGAAGAAGGGAGAGATGATGGAGAAGGAGATGAAATCGAGAGGAGAATTGATGAAAATTGAGGATCTGGATTTGGATGAGCTTTTGAAATTGAAGGAATCGTTGGAAAGGCTAAGAAAGAATGTGAAGATTGAAGAGAGCGAGTTGGAGGCGTCGTCTTCATTGCTGCTGCTTGCTAATGAACCCGTCGTGGAGGCGGATGAGTCCAATTCCTAA

mRNA sequence

ATGGGAAGGCGAAAAATCGAGATGAAAATGGTGAAGGATAGAGGTTCCAGACAAGTTACCTTTTCGAAGCGCCGAAACGGTCTGTTTAAGAAAGCGAACGATCTCGCTACTCTGTGCGGTTTAGAGATCGCGATTGTCGTCTTCTCTCCCGGCGGTAAGGCGTTCTCATTCGGCAATCCGAATGTTGAGGACGTCGTCGATCGATACCTAAATCGCGAATCGGAGGCGATTCAGATTCCGGCGGTGAGGGAGGGCGGAATTTTGGGGAAGGAGAATGAGGAACTGATCGATCTGGTTAAACAATTGCAAATGGAGAAGAAGAAGGGAGAGATGATGGAGAAGGAGATGAAATCGAGAGGAGAATTGATGAAAATTGAGGATCTGGATTTGGATGAGCTTTTGAAATTGAAGGAATCGTTGGAAAGGCTAAGAAAGAATGTGAAGATTGAAGAGAGCGAGTTGGAGGCGTCGTCTTCATTGCTGCTGCTTGCTAATGAACCCGTCGTGGAGGCGGATGAGTCCAATTCCTAA

Coding sequence (CDS)

ATGGGAAGGCGAAAAATCGAGATGAAAATGGTGAAGGATAGAGGTTCCAGACAAGTTACCTTTTCGAAGCGCCGAAACGGTCTGTTTAAGAAAGCGAACGATCTCGCTACTCTGTGCGGTTTAGAGATCGCGATTGTCGTCTTCTCTCCCGGCGGTAAGGCGTTCTCATTCGGCAATCCGAATGTTGAGGACGTCGTCGATCGATACCTAAATCGCGAATCGGAGGCGATTCAGATTCCGGCGGTGAGGGAGGGCGGAATTTTGGGGAAGGAGAATGAGGAACTGATCGATCTGGTTAAACAATTGCAAATGGAGAAGAAGAAGGGAGAGATGATGGAGAAGGAGATGAAATCGAGAGGAGAATTGATGAAAATTGAGGATCTGGATTTGGATGAGCTTTTGAAATTGAAGGAATCGTTGGAAAGGCTAAGAAAGAATGTGAAGATTGAAGAGAGCGAGTTGGAGGCGTCGTCTTCATTGCTGCTGCTTGCTAATGAACCCGTCGTGGAGGCGGATGAGTCCAATTCCTAA

Protein sequence

MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEIAIVVFSPGGKAFSFGNPNVEDVVDRYLNRESEAIQIPAVREGGILGKENEELIDLVKQLQMEKKKGEMMEKEMKSRGELMKIEDLDLDELLKLKESLERLRKNVKIEESELEASSSLLLLANEPVVEADESNS

Homology

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BLAST of Cla97C03G058240 vs. NCBI nr
Match: XP_038893813.1 (agamous-like MADS-box protein AGL29 [Benincasa hispida])

HSP 1 Score: 298.1 bits (762), Expect = 4.9e-77
Identity = 161/176 (91.48%), Postives = 169/176 (96.02%), Query Frame = 0


Query: 1   MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEIAIVVFSPGGKAFSFGNP 60
           MGRRKI+MKMVKDRG RQVTFSKRRNGLFKKANDLATLCGLEIAIVVFSPGGKAFSFGNP
Sbjct: 1   MGRRKIDMKMVKDRGCRQVTFSKRRNGLFKKANDLATLCGLEIAIVVFSPGGKAFSFGNP 60

Query: 61  NVEDVVDRYLNRESEAIQIPAVREGGILGKENEELIDLVKQLQMEKKKGEMMEKEMKSRG 120
           NVEDV+DRYLNRE EAI+IPAVRE G+  K+NEELIDLVKQLQMEKKKGEMMEKEMKSRG
Sbjct: 61  NVEDVIDRYLNREPEAIRIPAVRENGMTKKKNEELIDLVKQLQMEKKKGEMMEKEMKSRG 120

Query: 121 ELMKIEDLDLDELLKLKESLERLRKNVKIEESELEASSSLLLLANEPVVEADESNS 177
           ELMKIEDLDLDELLKLKESLE+LRKNVKIEESE+EA SSLLLLA EPV+EADESNS
Sbjct: 121 ELMKIEDLDLDELLKLKESLEKLRKNVKIEESEVEALSSLLLLAKEPVMEADESNS 176

[Close]

BLAST of Cla97C03G058240 vs. NCBI nr
Match: XP_023001476.1 (agamous-like MADS-box protein AGL29 [Cucurbita maxima])

HSP 1 Score: 275.4 bits (703), Expect = 3.4e-70
Identity = 154/176 (87.50%), Postives = 164/176 (93.18%), Query Frame = 0


Query: 1   MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEIAIVVFSPGGKAFSFGNP 60
           MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEIAI+VFSPGGKAFSFGNP
Sbjct: 1   MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEIAIIVFSPGGKAFSFGNP 60

Query: 61  NVEDVVDRYLNRESEAIQIPAVREGGILGKENEELIDLVKQLQMEKKKGEMMEKEMKSRG 120
           NVE+VVDRYLNR+SE   IP   E G+  KENEELIDLVKQLQ+EKKKGEM+EKEMKSRG
Sbjct: 61  NVEEVVDRYLNRKSE--PIPPASE-GMFEKENEELIDLVKQLQLEKKKGEMLEKEMKSRG 120

Query: 121 ELMKIEDLDLDELLKLKESLERLRKNVKIEESELEASSSLLLLANEPVVEADESNS 177
           E +KIEDLDLDELLKLKESLERLRKNV+++ESELEASSSLLLLANEPVVEAD S S
Sbjct: 121 ESIKIEDLDLDELLKLKESLERLRKNVRMKESELEASSSLLLLANEPVVEADASAS 173

[Close]

BLAST of Cla97C03G058240 vs. NCBI nr
Match: KAG6583909.1 (Agamous-like MADS-box protein AGL29, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 275.4 bits (703), Expect = 3.4e-70
Identity = 154/176 (87.50%), Postives = 164/176 (93.18%), Query Frame = 0


Query: 1   MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEIAIVVFSPGGKAFSFGNP 60
           MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEIAI+VFSPGGKAFSFGNP
Sbjct: 1   MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEIAIIVFSPGGKAFSFGNP 60

Query: 61  NVEDVVDRYLNRESEAIQIPAVREGGILGKENEELIDLVKQLQMEKKKGEMMEKEMKSRG 120
           NVEDVVDRYLNR+SE   IP   E G+  KENEELIDLVKQLQ+EKKKGEM+EKEMKSRG
Sbjct: 61  NVEDVVDRYLNRKSE--PIPPASE-GMFEKENEELIDLVKQLQLEKKKGEMLEKEMKSRG 120

Query: 121 ELMKIEDLDLDELLKLKESLERLRKNVKIEESELEASSSLLLLANEPVVEADESNS 177
           E +KIEDLDLDELLKLKESLERLR+NV+++ESELEASSSLLLLANEPVVEAD S S
Sbjct: 121 ESIKIEDLDLDELLKLKESLERLRQNVRMKESELEASSSLLLLANEPVVEADASAS 173

[Close]

BLAST of Cla97C03G058240 vs. NCBI nr
Match: XP_022927257.1 (agamous-like MADS-box protein AGL29 [Cucurbita moschata])

HSP 1 Score: 274.6 bits (701), Expect = 5.8e-70
Identity = 154/176 (87.50%), Postives = 163/176 (92.61%), Query Frame = 0


Query: 1   MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEIAIVVFSPGGKAFSFGNP 60
           MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEIAI+VFSPGGKAFSFGNP
Sbjct: 1   MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEIAIIVFSPGGKAFSFGNP 60

Query: 61  NVEDVVDRYLNRESEAIQIPAVREGGILGKENEELIDLVKQLQMEKKKGEMMEKEMKSRG 120
           NVEDVVDRYLNR+SE   IP   E G+  KENEELIDLVKQLQ+EKKKGEM+EKEMKSRG
Sbjct: 61  NVEDVVDRYLNRKSE--PIPPASE-GMFEKENEELIDLVKQLQLEKKKGEMLEKEMKSRG 120

Query: 121 ELMKIEDLDLDELLKLKESLERLRKNVKIEESELEASSSLLLLANEPVVEADESNS 177
           E +KIEDLDLDELLKLKESLERLR+NV ++ESELEASSSLLLLANEPVVEAD S S
Sbjct: 121 ESIKIEDLDLDELLKLKESLERLRQNVSMKESELEASSSLLLLANEPVVEADASAS 173

[Close]

BLAST of Cla97C03G058240 vs. NCBI nr
Match: XP_023519112.1 (agamous-like MADS-box protein AGL29 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 273.1 bits (697), Expect = 1.7e-69
Identity = 153/176 (86.93%), Postives = 163/176 (92.61%), Query Frame = 0


Query: 1   MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEIAIVVFSPGGKAFSFGNP 60
           MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEIAI+VFSPGGKAFSFGNP
Sbjct: 1   MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEIAIIVFSPGGKAFSFGNP 60

Query: 61  NVEDVVDRYLNRESEAIQIPAVREGGILGKENEELIDLVKQLQMEKKKGEMMEKEMKSRG 120
           NVEDVVDRYLNR+SE   IP   E G+  KENEELIDLVKQLQ+EKKKGEM+EKEMKSRG
Sbjct: 61  NVEDVVDRYLNRKSE--PIPPASE-GMFEKENEELIDLVKQLQLEKKKGEMLEKEMKSRG 120

Query: 121 ELMKIEDLDLDELLKLKESLERLRKNVKIEESELEASSSLLLLANEPVVEADESNS 177
           E +KIEDLDLDELLKLKESLE LR+NV+++ESELEASSSLLLLANEPVVEAD S S
Sbjct: 121 ESIKIEDLDLDELLKLKESLESLRQNVRMKESELEASSSLLLLANEPVVEADASAS 173

[Close]

BLAST of Cla97C03G058240 vs. ExPASy Swiss-Prot
Match: O64703 (Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana OX=3702 GN=AGL29 PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.3e-27
Identity = 74/172 (43.02%), Postives = 116/172 (67.44%), Query Frame = 0


Query: 1   MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEIAIVVFSPGGKAFSFGNP 60
           MGRRKI+M+MV+D  +RQVTFSKRR GLFKKA++LATLC  E+ IVVFSPGGK FS+G P
Sbjct: 1   MGRRKIKMEMVQDMNTRQVTFSKRRTGLFKKASELATLCNAELGIVVFSPGGKPFSYGKP 60

Query: 61  NVEDVVDRYLNRESEAIQIPAVREGGI---LGKENEELIDLVKQLQMEKKKGEMMEKEMK 120
           N++ V +R++    ++      + G     L + +E L  L ++++ EK++GE  +++++
Sbjct: 61  NLDSVAERFMREYDDSDSGDEEKSGNYRPKLKRLSERLDLLNQEVEAEKERGEKSQEKLE 120

Query: 121 SRGE---LMKIEDLDLDELLKLKESLERLRKNVKIEESELEASSSLLLLANE 167
           S G+      IE L LDEL + K+ L+ +   ++ + + L+ASS L+LL+ +
Sbjct: 121 SAGDERFKESIETLTLDELNEYKDRLQTVHGRIEGQVNHLQASSCLMLLSRK 172

[Close]

BLAST of Cla97C03G058240 vs. ExPASy Swiss-Prot
Match: Q9FKK2 (Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana OX=3702 GN=AGL62 PE=1 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 5.4e-26
Identity = 73/162 (45.06%), Postives = 105/162 (64.81%), Query Frame = 0


Query: 2   GRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEIAIVVFSPGGKAFSFGNPN 61
           GR+KIEM  +K+  + QVTFSKRR+GLFKKA++L TLCG E+AIVVFSPG K FSFG+PN
Sbjct: 7   GRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFSFGHPN 66

Query: 62  VEDVVDRYLN------RESEAIQIPAVREGGILGKENEELIDLVKQLQMEKKKGEMMEK- 121
           V+ V+DR++N       +   +Q+   R   I+   N  L  ++ QL+ EKKK + ++K 
Sbjct: 67  VDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYDELKKI 126

Query: 122 --EMKSRGELMK--IEDLDLDELLKLKESLERLRKNVKIEES 153
             + K+ G   +  +E+L L +L   K +LE L+K V +E S
Sbjct: 127 REKTKALGNWWEDPVEELALSQLEGFKGNLENLKKVVTVEAS 168

[Close]

BLAST of Cla97C03G058240 vs. ExPASy Swiss-Prot
Match: Q4PSU4 (Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=1 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.5e-23
Identity = 68/156 (43.59%), Postives = 101/156 (64.74%), Query Frame = 0


Query: 1   MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEIAIVVFSPGGKAFSFGNP 60
           +GR+KI M  +K    RQVTFSKRR GLFKKA++L TLCG EI I+VFSP  K FSFG+P
Sbjct: 62  IGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSFGHP 121

Query: 61  NVEDVVDRYLNRESEAIQIPAVREGGILG--KENEELIDLVKQLQMEKKKGEMME---KE 120
           +VE V+DRY++R + ++      +G      + N +L  ++ +++ EKKKG+ ME   KE
Sbjct: 122 SVESVLDRYVSRNNMSLAQSQQLQGSPAASCELNMQLTHILSEVEEEKKKGQAMEEMRKE 181

Query: 121 MKSRGEL----MKIEDLDLDELLKLKESLERLRKNV 148
              R  +      +E++++ +L ++K +LE LRK V
Sbjct: 182 SVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTV 217

[Close]

BLAST of Cla97C03G058240 vs. ExPASy Swiss-Prot
Match: O64645 (MADS-box protein SOC1 OS=Arabidopsis thaliana OX=3702 GN=SOC1 PE=1 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 2.9e-16
Identity = 52/156 (33.33%), Postives = 91/156 (58.33%), Query Frame = 0


Query: 1   MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEIAIVVFSPGGKAFSFGNP 60
           M R K +MK +++  SRQVTFSKRRNGL KKA +L+ LC  E+++++FSP GK + F + 
Sbjct: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASS 60

Query: 61  NVEDVVDRYLNRESEAIQIPAVREGGI--LGKENEELIDLVKQLQMEKKKGEMMEKEMKS 120
           N++D +DRYL    + +    V E  +  L  E   ++  ++QL+  K+K       +  
Sbjct: 61  NMQDTIDRYLRHTKDRVSTKPVSEENMQHLKYEAANMMKKIEQLEASKRK-------LLG 120

Query: 121 RGELMKIEDLDLDELLKLKESLERLRKNVKIEESEL 155
            G    I    ++EL ++++ LE+  K ++  ++++
Sbjct: 121 EG----IGTCSIEELQQIEQQLEKSVKCIRARKTQV 145

[Close]

BLAST of Cla97C03G058240 vs. ExPASy Swiss-Prot
Match: Q9LMM8 (Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana OX=3702 GN=AGL28 PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 8.6e-16
Identity = 60/161 (37.27%), Postives = 94/161 (58.39%), Query Frame = 0


Query: 1   MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEIAIVVFSPGGKAFSFGNP 60
           +GRRKIE+  + +  + QVTFSKRR+GLFKK ++L TLC  EIAI+VFSP GKA+SFG+P
Sbjct: 6   LGRRKIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSFGHP 65

Query: 61  NVEDVVDRYLNR--ESEAIQIPAVREGGILGKENEELIDLVKQLQMEKKKGEMM---EKE 120
           NV  ++D  L R            R    +   NE L +++ + + E++  + +   E+E
Sbjct: 66  NVNKLLDHSLGRVIRHNNTNFAESRTKLRIQMLNESLTEVMAEKEKEQETKQSIVQNERE 125

Query: 121 MKSRGELMKIE--DLDLDELLKLKESLERLRKNVKIEESEL 155
            K   +  +    +L+L +   +K  LE L+K V  + ++L
Sbjct: 126 NKDAEKWWRNSPTELNLAQSTSMKCDLEALKKEVDEKVAQL 166

[Close]

BLAST of Cla97C03G058240 vs. ExPASy TrEMBL
Match: A0A6J1KIQ5 (agamous-like MADS-box protein AGL29 OS=Cucurbita maxima OX=3661 GN=LOC111495601 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.6e-70
Identity = 154/176 (87.50%), Postives = 164/176 (93.18%), Query Frame = 0


Query: 1   MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEIAIVVFSPGGKAFSFGNP 60
           MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEIAI+VFSPGGKAFSFGNP
Sbjct: 1   MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEIAIIVFSPGGKAFSFGNP 60

Query: 61  NVEDVVDRYLNRESEAIQIPAVREGGILGKENEELIDLVKQLQMEKKKGEMMEKEMKSRG 120
           NVE+VVDRYLNR+SE   IP   E G+  KENEELIDLVKQLQ+EKKKGEM+EKEMKSRG
Sbjct: 61  NVEEVVDRYLNRKSE--PIPPASE-GMFEKENEELIDLVKQLQLEKKKGEMLEKEMKSRG 120

Query: 121 ELMKIEDLDLDELLKLKESLERLRKNVKIEESELEASSSLLLLANEPVVEADESNS 177
           E +KIEDLDLDELLKLKESLERLRKNV+++ESELEASSSLLLLANEPVVEAD S S
Sbjct: 121 ESIKIEDLDLDELLKLKESLERLRKNVRMKESELEASSSLLLLANEPVVEADASAS 173

[Close]

BLAST of Cla97C03G058240 vs. ExPASy TrEMBL
Match: A0A6J1EGN3 (agamous-like MADS-box protein AGL29 OS=Cucurbita moschata OX=3662 GN=LOC111434156 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 2.8e-70
Identity = 154/176 (87.50%), Postives = 163/176 (92.61%), Query Frame = 0


Query: 1   MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEIAIVVFSPGGKAFSFGNP 60
           MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEIAI+VFSPGGKAFSFGNP
Sbjct: 1   MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEIAIIVFSPGGKAFSFGNP 60

Query: 61  NVEDVVDRYLNRESEAIQIPAVREGGILGKENEELIDLVKQLQMEKKKGEMMEKEMKSRG 120
           NVEDVVDRYLNR+SE   IP   E G+  KENEELIDLVKQLQ+EKKKGEM+EKEMKSRG
Sbjct: 61  NVEDVVDRYLNRKSE--PIPPASE-GMFEKENEELIDLVKQLQLEKKKGEMLEKEMKSRG 120

Query: 121 ELMKIEDLDLDELLKLKESLERLRKNVKIEESELEASSSLLLLANEPVVEADESNS 177
           E +KIEDLDLDELLKLKESLERLR+NV ++ESELEASSSLLLLANEPVVEAD S S
Sbjct: 121 ESIKIEDLDLDELLKLKESLERLRQNVSMKESELEASSSLLLLANEPVVEADASAS 173

[Close]

BLAST of Cla97C03G058240 vs. ExPASy TrEMBL
Match: A0A5A7UFJ7 (Agamous-like MADS-box protein AGL29 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G00320 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 2.6e-68
Identity = 149/172 (86.63%), Postives = 158/172 (91.86%), Query Frame = 0


Query: 1   MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEIAIVVFSPGGKAFSFGNP 60
           MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKA DLATLCGLEIAIVVFSPGGKAFSFGNP
Sbjct: 1   MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKATDLATLCGLEIAIVVFSPGGKAFSFGNP 60

Query: 61  NVEDVVDRYLNRESEAIQIPAVREGGILGKENEELIDLVKQLQMEKKKGEMMEKEMKSRG 120
           NVE+VVDRYL+ E +  +  AVRE G+L KENEEL+DLVKQLQMEKKKGE+MEKEMKSRG
Sbjct: 61  NVEEVVDRYLSCEWKVNRNTAVRERGMLEKENEELLDLVKQLQMEKKKGEVMEKEMKSRG 120

Query: 121 ELMKIEDLDLDELLKLKESLERLRKNVKIEESELEASSSLLLLANEPVVEAD 173
           ELMKIEDLDL+ELLKLKESLE+LRKNVKIEESELEAS SLLLLANE  V  D
Sbjct: 121 ELMKIEDLDLNELLKLKESLEKLRKNVKIEESELEASFSLLLLANEKPVRGD 172

[Close]

BLAST of Cla97C03G058240 vs. ExPASy TrEMBL
Match: A0A1S3B9N7 (agamous-like MADS-box protein AGL29 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487550 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 2.6e-68
Identity = 149/172 (86.63%), Postives = 158/172 (91.86%), Query Frame = 0


Query: 1   MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEIAIVVFSPGGKAFSFGNP 60
           MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKA DLATLCGLEIAIVVFSPGGKAFSFGNP
Sbjct: 1   MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKATDLATLCGLEIAIVVFSPGGKAFSFGNP 60

Query: 61  NVEDVVDRYLNRESEAIQIPAVREGGILGKENEELIDLVKQLQMEKKKGEMMEKEMKSRG 120
           NVE+VVDRYL+ E +  +  AVRE G+L KENEEL+DLVKQLQMEKKKGE+MEKEMKSRG
Sbjct: 61  NVEEVVDRYLSCEWKVNRNTAVRERGMLEKENEELLDLVKQLQMEKKKGEVMEKEMKSRG 120

Query: 121 ELMKIEDLDLDELLKLKESLERLRKNVKIEESELEASSSLLLLANEPVVEAD 173
           ELMKIEDLDL+ELLKLKESLE+LRKNVKIEESELEAS SLLLLANE  V  D
Sbjct: 121 ELMKIEDLDLNELLKLKESLEKLRKNVKIEESELEASFSLLLLANEKPVRGD 172

[Close]

BLAST of Cla97C03G058240 vs. ExPASy TrEMBL
Match: A0A6J1CEW1 (agamous-like MADS-box protein AGL29 OS=Momordica charantia OX=3673 GN=LOC111010863 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 5.0e-67
Identity = 142/176 (80.68%), Postives = 162/176 (92.05%), Query Frame = 0


Query: 1   MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEIAIVVFSPGGKAFSFGNP 60
           MGRRKIEMKMVKDR SRQVTFSKRRNGLFKKANDLATLCGLEIAIVVFSPGGKAFSFG+P
Sbjct: 1   MGRRKIEMKMVKDRSSRQVTFSKRRNGLFKKANDLATLCGLEIAIVVFSPGGKAFSFGHP 60

Query: 61  NVEDVVDRYLNRESEAIQIPAVREGGILGKENEELIDLVKQLQMEKKKGEMMEKEMKSRG 120
           NVEDV+DRYLN ESE   IP  RE G++ KENEEL+DL+KQLQ+EK++GE++EKEMKS+ 
Sbjct: 61  NVEDVIDRYLNHESE--PIPPAREAGMIEKENEELLDLIKQLQLEKRRGEILEKEMKSKE 120

Query: 121 ELMKIEDLDLDELLKLKESLERLRKNVKIEESELEASSSLLLLANEPVVEADESNS 177
           E +KIEDL+ DELLKLKESLE+LR+NVKI+ SELEASSSLLLLANEPV+EAD S++
Sbjct: 121 ESIKIEDLNFDELLKLKESLEKLRENVKIKASELEASSSLLLLANEPVMEADRSDT 174

[Close]

BLAST of Cla97C03G058240 vs. TAIR 10
Match: AT2G34440.1 (AGAMOUS-like 29 )

HSP 1 Score: 124.4 bits (311), Expect = 9.0e-29
Identity = 74/172 (43.02%), Postives = 116/172 (67.44%), Query Frame = 0


Query: 1   MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEIAIVVFSPGGKAFSFGNP 60
           MGRRKI+M+MV+D  +RQVTFSKRR GLFKKA++LATLC  E+ IVVFSPGGK FS+G P
Sbjct: 1   MGRRKIKMEMVQDMNTRQVTFSKRRTGLFKKASELATLCNAELGIVVFSPGGKPFSYGKP 60

Query: 61  NVEDVVDRYLNRESEAIQIPAVREGGI---LGKENEELIDLVKQLQMEKKKGEMMEKEMK 120
           N++ V +R++    ++      + G     L + +E L  L ++++ EK++GE  +++++
Sbjct: 61  NLDSVAERFMREYDDSDSGDEEKSGNYRPKLKRLSERLDLLNQEVEAEKERGEKSQEKLE 120

Query: 121 SRGE---LMKIEDLDLDELLKLKESLERLRKNVKIEESELEASSSLLLLANE 167
           S G+      IE L LDEL + K+ L+ +   ++ + + L+ASS L+LL+ +
Sbjct: 121 SAGDERFKESIETLTLDELNEYKDRLQTVHGRIEGQVNHLQASSCLMLLSRK 172

[Close]

BLAST of Cla97C03G058240 vs. TAIR 10
Match: AT5G60440.1 (AGAMOUS-like 62 )

HSP 1 Score: 119.0 bits (297), Expect = 3.8e-27
Identity = 73/162 (45.06%), Postives = 105/162 (64.81%), Query Frame = 0


Query: 2   GRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEIAIVVFSPGGKAFSFGNPN 61
           GR+KIEM  +K+  + QVTFSKRR+GLFKKA++L TLCG E+AIVVFSPG K FSFG+PN
Sbjct: 7   GRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFSFGHPN 66

Query: 62  VEDVVDRYLN------RESEAIQIPAVREGGILGKENEELIDLVKQLQMEKKKGEMMEK- 121
           V+ V+DR++N       +   +Q+   R   I+   N  L  ++ QL+ EKKK + ++K 
Sbjct: 67  VDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYDELKKI 126

Query: 122 --EMKSRGELMK--IEDLDLDELLKLKESLERLRKNVKIEES 153
             + K+ G   +  +E+L L +L   K +LE L+K V +E S
Sbjct: 127 REKTKALGNWWEDPVEELALSQLEGFKGNLENLKKVVTVEAS 168

[Close]

BLAST of Cla97C03G058240 vs. TAIR 10
Match: AT3G66656.1 (AGAMOUS-like 91 )

HSP 1 Score: 111.7 bits (278), Expect = 6.1e-25
Identity = 69/177 (38.98%), Postives = 110/177 (62.15%), Query Frame = 0


Query: 1   MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEIAIVVFSPGGKAFSFGNP 60
           MGRRKI+M+ V+D  ++QVTFSKRR GLFKKA++LATLC  E+ IVVFSPG K +SFG P
Sbjct: 1   MGRRKIKMEKVQDTNTKQVTFSKRRLGLFKKASELATLCNAEVGIVVFSPGNKPYSFGKP 60

Query: 61  NVEDVVDRYLN-----RESEAIQIPAVREGGILGKEN---EELIDLVKQLQMEKKKGEMM 120
           N + + +R+ N      E ++ +      G    +E    + L  + ++ + EKK GE +
Sbjct: 61  NFDVIAERFKNEFEEEEEGDSCETSGYSRGNRARQEKKICKRLNSITEEAEAEKKHGEDL 120

Query: 121 EKEMKSRGE---LMKIEDLDLDELLKLKESLERLRKNVKIEESELEASSSLLLLANE 167
            K ++S  +      IE+L L+EL + +  ++++   ++   S ++ASSSL+ L+N+
Sbjct: 121 HKWLESAEQDKFNKPIEELTLEELKEFEAKIKKISCGIQSNISHMQASSSLMFLSND 177

[Close]

BLAST of Cla97C03G058240 vs. TAIR 10
Match: AT2G24840.1 (AGAMOUS-like 61 )

HSP 1 Score: 110.9 bits (276), Expect = 1.0e-24
Identity = 68/156 (43.59%), Postives = 101/156 (64.74%), Query Frame = 0


Query: 1   MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEIAIVVFSPGGKAFSFGNP 60
           +GR+KI M  +K    RQVTFSKRR GLFKKA++L TLCG EI I+VFSP  K FSFG+P
Sbjct: 62  IGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSFGHP 121

Query: 61  NVEDVVDRYLNRESEAIQIPAVREGGILG--KENEELIDLVKQLQMEKKKGEMME---KE 120
           +VE V+DRY++R + ++      +G      + N +L  ++ +++ EKKKG+ ME   KE
Sbjct: 122 SVESVLDRYVSRNNMSLAQSQQLQGSPAASCELNMQLTHILSEVEEEKKKGQAMEEMRKE 181

Query: 121 MKSRGEL----MKIEDLDLDELLKLKESLERLRKNV 148
              R  +      +E++++ +L ++K +LE LRK V
Sbjct: 182 SVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTV 217

[Close]

BLAST of Cla97C03G058240 vs. TAIR 10
Match: AT4G36590.1 (MADS-box transcription factor family protein )

HSP 1 Score: 95.1 bits (235), Expect = 5.9e-20
Identity = 60/166 (36.14%), Postives = 103/166 (62.05%), Query Frame = 0


Query: 2   GRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEIAIVVFSPGGKAFSFGNPN 61
           GR+KIEMK +++  + QVTFSKRR GLFKKA++L TL G EI ++VFSPGGK FSFG+P+
Sbjct: 7   GRQKIEMKKMENESNLQVTFSKRRFGLFKKASELCTLSGAEILLIVFSPGGKVFSFGHPS 66

Query: 62  VEDVVDRYLN---------RESEAIQIPAVREGGILGKENEELIDLVKQLQMEKKKGEMM 121
           V++++ R+ N          ++  +Q+   R    +   N  L +++   + EK+K  ++
Sbjct: 67  VQELIHRFSNPNHNSAIVHHQNNNLQLVETRPDRNIQYLNNILTEVLANQEKEKQKRMVL 126

Query: 122 EKEMKSRGEL-----MKIEDLDLDELLKLKESLERLRKNVKIEESE 154
           +   +SR ++       ++DLD++E  +L  +L+ ++K +  E S+
Sbjct: 127 DLLKESREQVGNWYEKDVKDLDMNETNQLISALQDVKKKLVREMSQ 172

The following BLAST results are available for this feature:

BLAST of Cla97C03G058240 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893813.1	4.9e-77	91.48	agamous-like MADS-box protein AGL29 [Benincasa hispida]	[more]
XP_023001476.1	3.4e-70	87.50	agamous-like MADS-box protein AGL29 [Cucurbita maxima]	[more]
KAG6583909.1	3.4e-70	87.50	Agamous-like MADS-box protein AGL29, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_022927257.1	5.8e-70	87.50	agamous-like MADS-box protein AGL29 [Cucurbita moschata]	[more]
XP_023519112.1	1.7e-69	86.93	agamous-like MADS-box protein AGL29 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cla97C03G058240 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64703	1.3e-27	43.02	Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana OX=3702 GN=AGL29 PE=...	[more]
Q9FKK2	5.4e-26	45.06	Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana OX=3702 GN=AGL62 PE=...	[more]
Q4PSU4	1.5e-23	43.59	Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=...	[more]
O64645	2.9e-16	33.33	MADS-box protein SOC1 OS=Arabidopsis thaliana OX=3702 GN=SOC1 PE=1 SV=1	[more]
Q9LMM8	8.6e-16	37.27	Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana OX=3702 GN=AGL28 PE=...	[more]

BLAST of Cla97C03G058240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KIQ5	1.6e-70	87.50	agamous-like MADS-box protein AGL29 OS=Cucurbita maxima OX=3661 GN=LOC111495601 ...	[more]
A0A6J1EGN3	2.8e-70	87.50	agamous-like MADS-box protein AGL29 OS=Cucurbita moschata OX=3662 GN=LOC11143415...	[more]
A0A5A7UFJ7	2.6e-68	86.63	Agamous-like MADS-box protein AGL29 isoform X1 OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3B9N7	2.6e-68	86.63	agamous-like MADS-box protein AGL29 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A6J1CEW1	5.0e-67	80.68	agamous-like MADS-box protein AGL29 OS=Momordica charantia OX=3673 GN=LOC1110108...	[more]

BLAST of Cla97C03G058240 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34440.1	9.0e-29	43.02	AGAMOUS-like 29	[more]
AT5G60440.1	3.8e-27	45.06	AGAMOUS-like 62	[more]
AT3G66656.1	6.1e-25	38.98	AGAMOUS-like 91	[more]
AT2G24840.1	1.0e-24	43.59	AGAMOUS-like 61	[more]
AT4G36590.1	5.9e-20	36.14	MADS-box transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 130..160
None	No IPR available	PANTHER	PTHR11945:SF229	AGAMOUS-LIKE MADS-BOX PROTEIN AGL29	coord: 2..173
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 2..173
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 3..23 score: 48.83 coord: 38..59 score: 38.96 coord: 23..38 score: 64.15
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 e-value: 5.2E-32 score: 122.3
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 12..57 e-value: 7.7E-23 score: 79.8
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 1..61 score: 26.225971
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 14..81 e-value: 1.7E-26 score: 93.8
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 1..73
IPR033896	MADS MEF2-like	CDD	cd00265	MADS_MEF2_like	coord: 2..71 e-value: 6.34126E-32 score: 108.023

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C03G058240.1	Cla97C03G058240.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding