Cla97C03G057800 (gene) Watermelon (97103) v2.5

Overview
NameCla97C03G057800
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Descriptiontranscription termination factor MTEF1, chloroplastic
LocationCla97Chr03: 6968492 .. 6969403 (-)
RNA-Seq ExpressionCla97C03G057800
SyntenyCla97C03G057800
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGTTCTTCAACTGCAACTGCTTTTCATTCTTCATTCTGCTTCTCTTCTCATAAACTTTCTGCTTCTTCCTCAAATTCCCATCAACCAAATCCTTTCTTATCAGCCAAACCCAAAACCCTTTTCCATAAGCATCCTCTCTATACACCGCTTCATTCCACTCTCTCTTCCCAAATCAAAGAGAAAATCCTCTGCCTTGAAATCATGGGTGTTGATGCTGGCAAGGCTCTTTCTCAGAATCCTTCTCTTCACTCTGTTACTCTTGAATCCATTCACTCTGTCATTTCTTTTCTCCAATCTAAAGGCATTCATCAAAAAGACTTTGCTAAAATCTTTGGAATGTGTCCCAAAATCCTCACCTCAGATGTTAAAACTGACCTAATCCCAGTTTTCAACTTCCTTTCTGAAGACCTTAAAATCCCAGATCAGAACTTTAGAAGGGCTATCAACAAGTGCCCAAGATTGCTTGCTTCAAGTGCCAAAGACCAGCTCAAACCAGCTTTGTTTTACCTTCAAAGACTTGGGTTGAAGGATTTGGAGGCTTTGGCTTATCATGATTCTGTTTTGCTGGTTTCAAGTGTGGAGAAGACCTTGATTCCCAAACTTAAGTATTTGGAGAGTTTGGGATTCTCAAGAAGTGAAACTGTGGGGATGGTTTTAAGGTGTCCAGCACTGCTCACTTTCAGCATTGAAAACAACTTCAAGCCAAAGTTTGAGTACTTCTCTGTGGAGATGCATAGAAAACTGGAGGAGCTCAAGGATTTTCCTCAGTATTTTGCCTTTAGCTTGGAAAAGAGGATAAAGCCAAGGTATGTGGAGACAGTCCAGAGTGGAAAGAAAGTGCCTTTGCCACTTATGCTCAAGACCACAGATGATGAGTTTAGAGAGTTGTTAACAGAAGGGGGTGGTTGA

mRNA sequence

ATGCGTTCTTCAACTGCAACTGCTTTTCATTCTTCATTCTGCTTCTCTTCTCATAAACTTTCTGCTTCTTCCTCAAATTCCCATCAACCAAATCCTTTCTTATCAGCCAAACCCAAAACCCTTTTCCATAAGCATCCTCTCTATACACCGCTTCATTCCACTCTCTCTTCCCAAATCAAAGAGAAAATCCTCTGCCTTGAAATCATGGGTGTTGATGCTGGCAAGGCTCTTTCTCAGAATCCTTCTCTTCACTCTGTTACTCTTGAATCCATTCACTCTGTCATTTCTTTTCTCCAATCTAAAGGCATTCATCAAAAAGACTTTGCTAAAATCTTTGGAATGTGTCCCAAAATCCTCACCTCAGATGTTAAAACTGACCTAATCCCAGTTTTCAACTTCCTTTCTGAAGACCTTAAAATCCCAGATCAGAACTTTAGAAGGGCTATCAACAAGTGCCCAAGATTGCTTGCTTCAAGTGCCAAAGACCAGCTCAAACCAGCTTTGTTTTACCTTCAAAGACTTGGGTTGAAGGATTTGGAGGCTTTGGCTTATCATGATTCTGTTTTGCTGGTTTCAAGTGTGGAGAAGACCTTGATTCCCAAACTTAAGTATTTGGAGAGTTTGGGATTCTCAAGAAGTGAAACTGTGGGGATGGTTTTAAGGTGTCCAGCACTGCTCACTTTCAGCATTGAAAACAACTTCAAGCCAAAGTTTGAGTACTTCTCTGTGGAGATGCATAGAAAACTGGAGGAGCTCAAGGATTTTCCTCAGTATTTTGCCTTTAGCTTGGAAAAGAGGATAAAGCCAAGGTATGTGGAGACAGTCCAGAGTGGAAAGAAAGTGCCTTTGCCACTTATGCTCAAGACCACAGATGATGAGTTTAGAGAGTTGTTAACAGAAGGGGGTGGTTGA

Coding sequence (CDS)

ATGCGTTCTTCAACTGCAACTGCTTTTCATTCTTCATTCTGCTTCTCTTCTCATAAACTTTCTGCTTCTTCCTCAAATTCCCATCAACCAAATCCTTTCTTATCAGCCAAACCCAAAACCCTTTTCCATAAGCATCCTCTCTATACACCGCTTCATTCCACTCTCTCTTCCCAAATCAAAGAGAAAATCCTCTGCCTTGAAATCATGGGTGTTGATGCTGGCAAGGCTCTTTCTCAGAATCCTTCTCTTCACTCTGTTACTCTTGAATCCATTCACTCTGTCATTTCTTTTCTCCAATCTAAAGGCATTCATCAAAAAGACTTTGCTAAAATCTTTGGAATGTGTCCCAAAATCCTCACCTCAGATGTTAAAACTGACCTAATCCCAGTTTTCAACTTCCTTTCTGAAGACCTTAAAATCCCAGATCAGAACTTTAGAAGGGCTATCAACAAGTGCCCAAGATTGCTTGCTTCAAGTGCCAAAGACCAGCTCAAACCAGCTTTGTTTTACCTTCAAAGACTTGGGTTGAAGGATTTGGAGGCTTTGGCTTATCATGATTCTGTTTTGCTGGTTTCAAGTGTGGAGAAGACCTTGATTCCCAAACTTAAGTATTTGGAGAGTTTGGGATTCTCAAGAAGTGAAACTGTGGGGATGGTTTTAAGGTGTCCAGCACTGCTCACTTTCAGCATTGAAAACAACTTCAAGCCAAAGTTTGAGTACTTCTCTGTGGAGATGCATAGAAAACTGGAGGAGCTCAAGGATTTTCCTCAGTATTTTGCCTTTAGCTTGGAAAAGAGGATAAAGCCAAGGTATGTGGAGACAGTCCAGAGTGGAAAGAAAGTGCCTTTGCCACTTATGCTCAAGACCACAGATGATGAGTTTAGAGAGTTGTTAACAGAAGGGGGTGGTTGA

Protein sequence

MRSSTATAFHSSFCFSSHKLSASSSNSHQPNPFLSAKPKTLFHKHPLYTPLHSTLSSQIKEKILCLEIMGVDAGKALSQNPSLHSVTLESIHSVISFLQSKGIHQKDFAKIFGMCPKILTSDVKTDLIPVFNFLSEDLKIPDQNFRRAINKCPRLLASSAKDQLKPALFYLQRLGLKDLEALAYHDSVLLVSSVEKTLIPKLKYLESLGFSRSETVGMVLRCPALLTFSIENNFKPKFEYFSVEMHRKLEELKDFPQYFAFSLEKRIKPRYVETVQSGKKVPLPLMLKTTDDEFRELLTEGGG
Homology
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BLAST of Cla97C03G057800 vs. NCBI nr
Match: XP_038895185.1 (transcription termination factor MTEF1, chloroplastic [Benincasa hispida])

HSP 1 Score: 570.1 bits (1468), Expect = 1.2e-158
Identity = 292/303 (96.37%), Postives = 297/303 (98.02%), Query Frame = 0 

Query: 1   MRSSTATAFHSSFCFSSHKLSASSSNSHQPNPFLSAKPKTLFHKHPLYTPLHSTLSSQIK 60
           M SSTATAFHSSFCFSSHKLS+SSS+SHQPN FLSAKPKTLFHKHPLYTPLHSTLSSQIK
Sbjct: 1   MPSSTATAFHSSFCFSSHKLSSSSSSSHQPNTFLSAKPKTLFHKHPLYTPLHSTLSSQIK 60

Query: 61  EKILCLEIMGVDAGKALSQNPSLHSVTLESIHSVISFLQSKGIHQKDFAKIFGMCPKILT 120
           EKILCLEIMGVDAGKALSQNPSLHSVTLESIHSVISFLQSKGIHQKDFAKIFGMCPKILT
Sbjct: 61  EKILCLEIMGVDAGKALSQNPSLHSVTLESIHSVISFLQSKGIHQKDFAKIFGMCPKILT 120

Query: 121 SDVKTDLIPVFNFLSEDLKIPDQNFRRAINKCPRLLASSAKDQLKPALFYLQRLGLKDLE 180
           SDVKTDLIPVFNFLSEDLKIPDQNFRRAINKCPRLLASS KDQLKPALFYLQRLGLKDLE
Sbjct: 121 SDVKTDLIPVFNFLSEDLKIPDQNFRRAINKCPRLLASSPKDQLKPALFYLQRLGLKDLE 180

Query: 181 ALAYHDSVLLVSSVEKTLIPKLKYLESLGFSRSETVGMVLRCPALLTFSIENNFKPKFEY 240
           ALAY DSVLLVSSVEKTLIPKLKYLESLG SRSETVGMVLRCPALLTFSIENNFKPKFEY
Sbjct: 181 ALAYRDSVLLVSSVEKTLIPKLKYLESLGLSRSETVGMVLRCPALLTFSIENNFKPKFEY 240

Query: 241 FSVEMHRKLEELKDFPQYFAFSLEKRIKPRYVETVQSGKKVPLPLMLKTTDDEFRELLTE 300
           FSVEMHRKLEELKDFPQYFAFSLEKRIKPRYVETV+SGKKVPLPLMLKTTDDEFR+LLT+
Sbjct: 241 FSVEMHRKLEELKDFPQYFAFSLEKRIKPRYVETVRSGKKVPLPLMLKTTDDEFRQLLTQ 300

Query: 301 GGG 304
           G G
Sbjct: 301 GDG 303

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BLAST of Cla97C03G057800 vs. NCBI nr
Match: XP_008444692.1 (PREDICTED: transcription termination factor MTEF1, chloroplastic [Cucumis melo] >KAA0054024.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa] >TYK20710.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa])

HSP 1 Score: 550.4 bits (1417), Expect = 9.4e-153
Identity = 284/304 (93.42%), Postives = 292/304 (96.05%), Query Frame = 0 

Query: 1   MRSSTATAFHSSFCFSSH-KLSASSSNSHQPNPFLSAKPKTLFHKHPLYTPLHSTLSSQI 60
           M SS+ATAFHSSFCFSSH KLS+S SNSHQPN  LS KPKTL HKHPLYTPLHSTLSSQ 
Sbjct: 1   MSSSSATAFHSSFCFSSHNKLSSSPSNSHQPNTSLSPKPKTLLHKHPLYTPLHSTLSSQT 60

Query: 61  KEKILCLEIMGVDAGKALSQNPSLHSVTLESIHSVISFLQSKGIHQKDFAKIFGMCPKIL 120
           KEKILCLEIMGVD+GKALSQNPSLH VTLESIHSVISFLQSKGIHQKDFAKIFGMCPKIL
Sbjct: 61  KEKILCLEIMGVDSGKALSQNPSLHCVTLESIHSVISFLQSKGIHQKDFAKIFGMCPKIL 120

Query: 121 TSDVKTDLIPVFNFLSEDLKIPDQNFRRAINKCPRLLASSAKDQLKPALFYLQRLGLKDL 180
           TSDVKTDLIPVFNFLSEDLKIPDQNFR+AINKCPRLLASSA+DQLKPALFYLQRLGLKDL
Sbjct: 121 TSDVKTDLIPVFNFLSEDLKIPDQNFRKAINKCPRLLASSAEDQLKPALFYLQRLGLKDL 180

Query: 181 EALAYHDSVLLVSSVEKTLIPKLKYLESLGFSRSETVGMVLRCPALLTFSIENNFKPKFE 240
           EALAYHDSVLLVSSVEKTLIPKLKYLESLGF+RSETVGMVLRCPALLTFSIENNFKPKFE
Sbjct: 181 EALAYHDSVLLVSSVEKTLIPKLKYLESLGFTRSETVGMVLRCPALLTFSIENNFKPKFE 240

Query: 241 YFSVEMHRKLEELKDFPQYFAFSLEKRIKPRYVETVQSGKKVPLPLMLKTTDDEFRELLT 300
           YFSVEMHRKLEELKDFPQYFAFSLEKRIKPR+VETV+SGKKVPL LMLKTTD EFRELL 
Sbjct: 241 YFSVEMHRKLEELKDFPQYFAFSLEKRIKPRHVETVESGKKVPLSLMLKTTDVEFRELLA 300

Query: 301 EGGG 304
           EGGG
Sbjct: 301 EGGG 304

[Close]
BLAST of Cla97C03G057800 vs. NCBI nr
Match: XP_004154376.1 (transcription termination factor MTEF1, chloroplastic [Cucumis sativus] >KGN65875.1 hypothetical protein Csa_023269 [Cucumis sativus])

HSP 1 Score: 549.3 bits (1414), Expect = 2.1e-152
Identity = 282/304 (92.76%), Postives = 292/304 (96.05%), Query Frame = 0 

Query: 1   MRSSTATAFHSSFCFSSH-KLSASSSNSHQPNPFLSAKPKTLFHKHPLYTPLHSTLSSQI 60
           M SS+ATAFHSSFCFSSH KLS+S SNSHQPN  LS KPKTL HKHPLYTPLHST+SSQ 
Sbjct: 1   MSSSSATAFHSSFCFSSHNKLSSSPSNSHQPNTSLSPKPKTLLHKHPLYTPLHSTVSSQT 60

Query: 61  KEKILCLEIMGVDAGKALSQNPSLHSVTLESIHSVISFLQSKGIHQKDFAKIFGMCPKIL 120
           KEKILCLEIMGVD+GKALSQNPSLHSVTLESIHSVISFLQSKGIHQKDFAKIFGMCPKIL
Sbjct: 61  KEKILCLEIMGVDSGKALSQNPSLHSVTLESIHSVISFLQSKGIHQKDFAKIFGMCPKIL 120

Query: 121 TSDVKTDLIPVFNFLSEDLKIPDQNFRRAINKCPRLLASSAKDQLKPALFYLQRLGLKDL 180
           TSDVKTDL+PVFNFLSEDLKIPDQNFR+AINKCPRLLASSA+DQLKPALFYLQRLGLKDL
Sbjct: 121 TSDVKTDLVPVFNFLSEDLKIPDQNFRKAINKCPRLLASSAEDQLKPALFYLQRLGLKDL 180

Query: 181 EALAYHDSVLLVSSVEKTLIPKLKYLESLGFSRSETVGMVLRCPALLTFSIENNFKPKFE 240
           EALAYHDSVLLVSSVEKTLIPKLKYLESLGF+RSE VGMVLRCPALLTFSIENNFKPKFE
Sbjct: 181 EALAYHDSVLLVSSVEKTLIPKLKYLESLGFTRSEIVGMVLRCPALLTFSIENNFKPKFE 240

Query: 241 YFSVEMHRKLEELKDFPQYFAFSLEKRIKPRYVETVQSGKKVPLPLMLKTTDDEFRELLT 300
           YFSVEMH+KLEELKDFPQYFAFSLEKRIKPRYVETV+SGKKVPL LMLKTTD EFRELL 
Sbjct: 241 YFSVEMHKKLEELKDFPQYFAFSLEKRIKPRYVETVESGKKVPLSLMLKTTDVEFRELLA 300

Query: 301 EGGG 304
           EGGG
Sbjct: 301 EGGG 304

[Close]
BLAST of Cla97C03G057800 vs. NCBI nr
Match: XP_022139889.1 (transcription termination factor MTEF1, chloroplastic [Momordica charantia])

HSP 1 Score: 548.5 bits (1412), Expect = 3.6e-152
Identity = 283/307 (92.18%), Postives = 292/307 (95.11%), Query Frame = 0 

Query: 1   MRSSTATAFHSSFCFSSHKLSA----SSSNSHQPNPFLSAKPKTLFHKHPLYTPLHSTLS 60
           M ++TATAFHSSFCFSSHKLS+    S SNSHQPN  L+AKPKTLFHKHPLYTPLHSTLS
Sbjct: 1   MPAATATAFHSSFCFSSHKLSSSPSNSHSNSHQPNTLLAAKPKTLFHKHPLYTPLHSTLS 60

Query: 61  SQIKEKILCLEIMGVDAGKALSQNPSLHSVTLESIHSVISFLQSKGIHQKDFAKIFGMCP 120
           SQ+KEKILCLEIMGVDAGKALS NPSLHSVTLESIHSVISFLQSKGIHQKDFAKIFGMCP
Sbjct: 61  SQVKEKILCLEIMGVDAGKALSLNPSLHSVTLESIHSVISFLQSKGIHQKDFAKIFGMCP 120

Query: 121 KILTSDVKTDLIPVFNFLSEDLKIPDQNFRRAINKCPRLLASSAKDQLKPALFYLQRLGL 180
           KILTSDVKTDLIPVFNFLSEDLKIPDQ+FRR INKCPRLLASSAKDQLKPALFYLQRLGL
Sbjct: 121 KILTSDVKTDLIPVFNFLSEDLKIPDQSFRRTINKCPRLLASSAKDQLKPALFYLQRLGL 180

Query: 181 KDLEALAYHDSVLLVSSVEKTLIPKLKYLESLGFSRSETVGMVLRCPALLTFSIENNFKP 240
           +DLEALAYHDSVLLVSSVE+TLIPKLKYLESLGFSRSETVGMVLRCPALLTFSIENNFKP
Sbjct: 181 RDLEALAYHDSVLLVSSVERTLIPKLKYLESLGFSRSETVGMVLRCPALLTFSIENNFKP 240

Query: 241 KFEYFSVEMHRKLEELKDFPQYFAFSLEKRIKPRYVETVQSGKKVPLPLMLKTTDDEFRE 300
           KFEYFS EMH KLEELKDFPQYFAFSLEKRIKPRY+ETVQSGKKVPL LMLKTTDDEFRE
Sbjct: 241 KFEYFSGEMHGKLEELKDFPQYFAFSLEKRIKPRYLETVQSGKKVPLSLMLKTTDDEFRE 300

Query: 301 LLTEGGG 304
           LL EG G
Sbjct: 301 LLREGQG 307

[Close]
BLAST of Cla97C03G057800 vs. NCBI nr
Match: XP_022927002.1 (transcription termination factor MTEF1, chloroplastic-like [Cucurbita moschata] >XP_023519150.1 transcription termination factor MTEF1, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 530.0 bits (1364), Expect = 1.3e-146
Identity = 272/298 (91.28%), Postives = 279/298 (93.62%), Query Frame = 0 

Query: 6   ATAFHSSFCFSSHKLSASSSNSHQPNPFLSAKPKTLFHKHPLYTPLHSTLSSQIKEKILC 65
           A AF SSFCFSSH+LSAS SNS QPN FL+AKPK+LFHKHPLYTPLHSTLSSQIKEKILC
Sbjct: 3   AAAFPSSFCFSSHELSASPSNSQQPNTFLAAKPKSLFHKHPLYTPLHSTLSSQIKEKILC 62

Query: 66  LEIMGVDAGKALSQNPSLHSVTLESIHSVISFLQSKGIHQKDFAKIFGMCPKILTSDVKT 125
           LEIMGVDAGKALSQNPSLHSVTLESIHSVISFLQSKGIHQKDFAKIFGMCPKILTSDVK 
Sbjct: 63  LEIMGVDAGKALSQNPSLHSVTLESIHSVISFLQSKGIHQKDFAKIFGMCPKILTSDVKA 122

Query: 126 DLIPVFNFLSEDLKIPDQNFRRAINKCPRLLASSAKDQLKPALFYLQRLGLKDLEALAYH 185
           DLIPVF+FLSEDLKIPDQNFRR INKCPRLLASSAKDQLKPALFYLQRLG KDLEALAY 
Sbjct: 123 DLIPVFSFLSEDLKIPDQNFRRVINKCPRLLASSAKDQLKPALFYLQRLGFKDLEALAYQ 182

Query: 186 DSVLLVSSVEKTLIPKLKYLESLGFSRSETVGMVLRCPALLTFSIENNFKPKFEYFSVEM 245
           DS LLVSSVEKTLIPKLKYL+SLGFSRSETVGMVLRCPALLTFSIENN KPKFEYFS EM
Sbjct: 183 DSALLVSSVEKTLIPKLKYLQSLGFSRSETVGMVLRCPALLTFSIENNLKPKFEYFSGEM 242

Query: 246 HRKLEELKDFPQYFAFSLEKRIKPRYVETVQSGKKVPLPLMLKTTDDEFRELLTEGGG 304
            RK+EELKDFPQYF FSLEKRIKPRYVETVQSGK V LPLMLK TDDEF+ELL E GG
Sbjct: 243 QRKVEELKDFPQYFGFSLEKRIKPRYVETVQSGKNVALPLMLKATDDEFKELLREEGG 300

[Close]
BLAST of Cla97C03G057800 vs. ExPASy Swiss-Prot
Match: Q84X53 (Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF1 PE=2 SV=2)

HSP 1 Score: 214.9 bits (546), Expect = 1.2e-54
Identity = 112/242 (46.28%), Postives = 164/242 (67.77%), Query Frame = 0 

Query: 60  KEKILCLEIMGVDAGKALSQNPSLHSVTLESIHSVISFLQSKGIHQKDFAKIFGMCPKIL 119
           +EK++ L+ + VD  KAL  NPSL S  + S+ SV + L S G+ +    +I  M P +L
Sbjct: 34  REKLIYLQDLNVDPHKALRVNPSLRSAPISSVVSVETLLSSTGLSRPAVGRILDMFPDLL 93

Query: 120 TSDVKTDLIPVFNFLSEDLKIPDQNFRRAINKCPRLLASSAKDQLKPALFYLQRLGLKDL 179
           TSD +++++PV  FLS ++ I +Q+  ++I++CPRLL SS   QL+PAL +L+ LG    
Sbjct: 94  TSDPESEILPVLRFLSNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLGFVGR 153

Query: 180 EALAYHDSVLLVSSVEKTLIPKLKYL-ESLGFSRSETVGMVLRCPALLTFSIENNFKPKF 239
           + +   ++VLLVS+VE+TLIPK++YL E LGF+R E   MV+R PALLT+S++NN  PK 
Sbjct: 154 DTITSRNTVLLVSNVERTLIPKIEYLEEGLGFTREEVAKMVVRSPALLTYSVDNNLVPKV 213

Query: 240 EYFSVEMHRKLEELKDFPQYFAFSLEKRIKPRYVETVQSGKKVPLPLMLKTTDDEFRELL 299
           E+F  EM   ++ELK FPQYF+FSLE++IKPR+    + G  +PL  MLK +D +F   L
Sbjct: 214 EFFIEEMRGDVKELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSDGQFNHWL 273

Query: 300 TE 301
            E
Sbjct: 274 LE 275

[Close]
BLAST of Cla97C03G057800 vs. ExPASy Swiss-Prot
Match: F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 1.1e-23
Identity = 82/264 (31.06%), Postives = 139/264 (52.65%), Query Frame = 0 

Query: 39  KTLFHKHPLYTPLHSTLSSQIK---EKILCLEIMGVDAGKALSQNPSLHSVTL-ESIHSV 98
           KT+  K   + P +S L  +IK   E +L L I   D    L + P +  ++L +++   
Sbjct: 214 KTITRKFAAF-PYYS-LDGKIKPVVEFLLDLGIPKSDIPTILCKRPQICGISLTDNLKPT 273

Query: 99  ISFLQSKGIHQKDFAKIFGMCPKILTSDVKTDLIPVFNFLSEDLKIPDQNFRRAINKCPR 158
           ++FL++ GI +  +AKI    P ILT   +  L     FLS+   + ++   R + +CP 
Sbjct: 274 MAFLETLGIDKNQWAKIISRFPAILTYS-RQKLTSTVEFLSQ-TGLTEEQIGRILTRCPN 333

Query: 159 LLASSAKDQLKPALFYLQRLGLKDLEALAYHDSVLLVSSVEKTLIPKLKYLESLGFSRSE 218
           +++ S +D+L+P + Y + L + D+  L +        S+E  L P  ++    GF   E
Sbjct: 334 IMSYSVEDKLRPTMEYFRSLNV-DVAVLLHRCPQTFGLSIESNLKPVTEFFLEKGFGLDE 393

Query: 219 TVGMVLRCPALLTFSIENNFKPKFEYFSVEMHRKLEELKDFPQYFAFSLEKRIKPRYVET 278
              M+ R  AL TFS++ N  PK++YF    + K  EL  FPQ+F +SL++RIKPRY   
Sbjct: 394 IGIMISRYGALYTFSLKENVMPKWDYFQTMDYPK-SELVKFPQFFGYSLQERIKPRYELV 453

Query: 279 VQSGKKVPLPLMLKTTDDEFRELL 299
            +SG ++ L  +L  +  EF +++
Sbjct: 454 QRSGVRLLLNQVLSLSGIEFEKVV 471

[Close]
BLAST of Cla97C03G057800 vs. ExPASy Swiss-Prot
Match: F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 6.8e-21
Identity = 76/255 (29.80%), Postives = 131/255 (51.37%), Query Frame = 0 

Query: 48  YTPLHSTLSSQIKE-KILCLEIMGV---DAGKALSQNPSLHSVTLES-IHSVISFLQSKG 107
           Y  +    S Q+ E KI  L+  G+   + G+ L+  P L   ++E     ++ +    G
Sbjct: 340 YPKIIGFFSFQVMEKKINYLKEFGLSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFYYLG 399

Query: 108 IHQKDFAKIFGMCPKILTSDVKTDLIPVFNFLSEDLKIPDQNFRRAINKCPRLLASSAKD 167
           I ++   +I  + P +   D++  + P   FL E + IP++     + K P LL +S   
Sbjct: 400 IPKEGMKRILVVKPILYCIDLEKTIAPKVRFLQE-MGIPNEAIGNMLVKFPSLLTNSLYK 459

Query: 168 QLKP-ALFYLQRLGL--KDLEALAYHDSVLLVSSVEKTLIPKLKYLESLGFSRSETVGMV 227
           +++P  +F L R G+  KD+  +   D  LL  S+   L P ++Y  SLG    +   M+
Sbjct: 460 KIRPVVIFLLTRAGVTQKDIGKVIAMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGEMI 519

Query: 228 LRCPALLTFSIENNFKPKFEYFSVEMHRKLEELKDFPQYFAFSLEKRIKPRYVETVQSGK 287
              P LL ++++ N +PK+ Y    M R L++L +FP++F++SLE+RI PR+   V++  
Sbjct: 520 ADFPMLLRYNVD-NLRPKYRYLRRTMIRPLQDLIEFPRFFSYSLERRIIPRHTIMVENRV 579

Query: 288 KVPLPLMLKTTDDEF 295
              L  ML  TD+EF
Sbjct: 580 NFKLRYMLACTDEEF 592

[Close]
BLAST of Cla97C03G057800 vs. ExPASy Swiss-Prot
Match: Q9ZT96 (Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF4 PE=1 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 9.2e-18
Identity = 71/273 (26.01%), Postives = 120/273 (43.96%), Query Frame = 0 

Query: 66  LEIMGVDAGKALSQNPSLHSVTLESIHSV-ISFLQSKGIHQKDFAKIFGMCPKILTSDVK 125
           L+I   D  + L + P +    LE   S  +++L   G+ +++   I    P+IL   V 
Sbjct: 225 LDIKPSDVPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGILTRYPEILGMRVA 284

Query: 126 TDLIPVFNFLSEDLKIPDQNFRRAINKCPRLLASSAKDQLKPALFYLQRLGLKDL---EA 185
             + P+  +L E L IP     R I K P +L     D +KP +  LQ   +++      
Sbjct: 285 RIIKPLVEYL-EVLGIPRLAAARLIEKRPHILGFELDDTVKPNVQILQDFNVRETSLPSI 344

Query: 186 LAYHDSVL-----------------------------------LVSSVEKTLIPKLKYLE 245
           +A +  ++                                    VS  E  ++  + +L 
Sbjct: 345 IAQYPEIIGIDLKPKLDTQRKLLCSAIHLNPEDLGSLIERMPQFVSLSESPMLKHIDFLT 404

Query: 246 SLGFSRSETVGMVLRCPALLTFSIENNFKPKFEYFSVEMHRKLEELKDFPQYFAFSLEKR 300
             GFS  +T  MV+ CP +L  ++    K  FEYF  EM R L++L DFP +F + LE  
Sbjct: 405 KCGFSIDQTREMVIGCPQVLALNL-GIMKLSFEYFQKEMKRPLQDLVDFPAFFTYGLEST 464

[Close]
BLAST of Cla97C03G057800 vs. ExPASy Swiss-Prot
Match: Q9FM80 (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF9 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 7.8e-17
Identity = 61/265 (23.02%), Postives = 125/265 (47.17%), Query Frame = 0 

Query: 41  LFHKHPLYTPLHSTLSSQIKEKILCLEIMGVDAGKALSQNPSLHSVTLE-SIHSVISFLQ 100
           ++ +H     ++   + +  + +L + +   D  + L + P +   T+E ++ + ISFL 
Sbjct: 204 MYERHMPSLQINVFSAQERLDYLLSVGVKHRDIKRMLLRQPQILQYTVENNLKAHISFLM 263

Query: 101 SKGIHQKDFAKIFGMCPKILTSDVKTDLIPVFNFLSEDLKIPDQNFRRAINKCPRLLASS 160
             GI      +I    P + +  V+  L P   +L E++ I + +  + +   P++L   
Sbjct: 264 GLGIPNSKIGQIVAATPSLFSYSVENSLRPTIRYLIEEVGIKETDVGKVVQLSPQILVQR 323

Query: 161 AKDQLKPALFYLQRLGLKDLEALAYHDSV---------LLVSSVEKTLIPKLKYLESLGF 220
                     +L +      E  A  DSV         LL  S++   +P++ +L S+G 
Sbjct: 324 LDITWNTRYMFLSK------ELGAPRDSVVKMVKKHPQLLHYSIDDGFLPRINFLRSIGM 383

Query: 221 SRSETVGMVLRCPALLTFSIENNFKPKFEYFSVEMHRKLEELKDFPQYFAFSLEKRIKP- 280
             S+ + ++     +L+ S+E+N KPK+ Y   E++ ++  L  +P Y + SL++RI+P 
Sbjct: 384 CNSDILKVLTSLTQVLSLSLEDNLKPKYMYLVNELNNEVHILTKYPMYLSLSLDQRIRPR 443

Query: 281 -RYVETVQSGKKVPLPLMLKTTDDE 294
            R++  ++  +K P PL     +DE
Sbjct: 444 HRFLVELKKVRKGPFPLSSLVPNDE 462

[Close]
BLAST of Cla97C03G057800 vs. ExPASy TrEMBL
Match: A0A5D3DB89 (Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G001070 PE=3 SV=1)

HSP 1 Score: 550.4 bits (1417), Expect = 4.6e-153
Identity = 284/304 (93.42%), Postives = 292/304 (96.05%), Query Frame = 0 

Query: 1   MRSSTATAFHSSFCFSSH-KLSASSSNSHQPNPFLSAKPKTLFHKHPLYTPLHSTLSSQI 60
           M SS+ATAFHSSFCFSSH KLS+S SNSHQPN  LS KPKTL HKHPLYTPLHSTLSSQ 
Sbjct: 1   MSSSSATAFHSSFCFSSHNKLSSSPSNSHQPNTSLSPKPKTLLHKHPLYTPLHSTLSSQT 60

Query: 61  KEKILCLEIMGVDAGKALSQNPSLHSVTLESIHSVISFLQSKGIHQKDFAKIFGMCPKIL 120
           KEKILCLEIMGVD+GKALSQNPSLH VTLESIHSVISFLQSKGIHQKDFAKIFGMCPKIL
Sbjct: 61  KEKILCLEIMGVDSGKALSQNPSLHCVTLESIHSVISFLQSKGIHQKDFAKIFGMCPKIL 120

Query: 121 TSDVKTDLIPVFNFLSEDLKIPDQNFRRAINKCPRLLASSAKDQLKPALFYLQRLGLKDL 180
           TSDVKTDLIPVFNFLSEDLKIPDQNFR+AINKCPRLLASSA+DQLKPALFYLQRLGLKDL
Sbjct: 121 TSDVKTDLIPVFNFLSEDLKIPDQNFRKAINKCPRLLASSAEDQLKPALFYLQRLGLKDL 180

Query: 181 EALAYHDSVLLVSSVEKTLIPKLKYLESLGFSRSETVGMVLRCPALLTFSIENNFKPKFE 240
           EALAYHDSVLLVSSVEKTLIPKLKYLESLGF+RSETVGMVLRCPALLTFSIENNFKPKFE
Sbjct: 181 EALAYHDSVLLVSSVEKTLIPKLKYLESLGFTRSETVGMVLRCPALLTFSIENNFKPKFE 240

Query: 241 YFSVEMHRKLEELKDFPQYFAFSLEKRIKPRYVETVQSGKKVPLPLMLKTTDDEFRELLT 300
           YFSVEMHRKLEELKDFPQYFAFSLEKRIKPR+VETV+SGKKVPL LMLKTTD EFRELL 
Sbjct: 241 YFSVEMHRKLEELKDFPQYFAFSLEKRIKPRHVETVESGKKVPLSLMLKTTDVEFRELLA 300

Query: 301 EGGG 304
           EGGG
Sbjct: 301 EGGG 304

[Close]
BLAST of Cla97C03G057800 vs. ExPASy TrEMBL
Match: A0A1S3BBS5 (transcription termination factor MTEF1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487950 PE=3 SV=1)

HSP 1 Score: 550.4 bits (1417), Expect = 4.6e-153
Identity = 284/304 (93.42%), Postives = 292/304 (96.05%), Query Frame = 0 

Query: 1   MRSSTATAFHSSFCFSSH-KLSASSSNSHQPNPFLSAKPKTLFHKHPLYTPLHSTLSSQI 60
           M SS+ATAFHSSFCFSSH KLS+S SNSHQPN  LS KPKTL HKHPLYTPLHSTLSSQ 
Sbjct: 1   MSSSSATAFHSSFCFSSHNKLSSSPSNSHQPNTSLSPKPKTLLHKHPLYTPLHSTLSSQT 60

Query: 61  KEKILCLEIMGVDAGKALSQNPSLHSVTLESIHSVISFLQSKGIHQKDFAKIFGMCPKIL 120
           KEKILCLEIMGVD+GKALSQNPSLH VTLESIHSVISFLQSKGIHQKDFAKIFGMCPKIL
Sbjct: 61  KEKILCLEIMGVDSGKALSQNPSLHCVTLESIHSVISFLQSKGIHQKDFAKIFGMCPKIL 120

Query: 121 TSDVKTDLIPVFNFLSEDLKIPDQNFRRAINKCPRLLASSAKDQLKPALFYLQRLGLKDL 180
           TSDVKTDLIPVFNFLSEDLKIPDQNFR+AINKCPRLLASSA+DQLKPALFYLQRLGLKDL
Sbjct: 121 TSDVKTDLIPVFNFLSEDLKIPDQNFRKAINKCPRLLASSAEDQLKPALFYLQRLGLKDL 180

Query: 181 EALAYHDSVLLVSSVEKTLIPKLKYLESLGFSRSETVGMVLRCPALLTFSIENNFKPKFE 240
           EALAYHDSVLLVSSVEKTLIPKLKYLESLGF+RSETVGMVLRCPALLTFSIENNFKPKFE
Sbjct: 181 EALAYHDSVLLVSSVEKTLIPKLKYLESLGFTRSETVGMVLRCPALLTFSIENNFKPKFE 240

Query: 241 YFSVEMHRKLEELKDFPQYFAFSLEKRIKPRYVETVQSGKKVPLPLMLKTTDDEFRELLT 300
           YFSVEMHRKLEELKDFPQYFAFSLEKRIKPR+VETV+SGKKVPL LMLKTTD EFRELL 
Sbjct: 241 YFSVEMHRKLEELKDFPQYFAFSLEKRIKPRHVETVESGKKVPLSLMLKTTDVEFRELLA 300

Query: 301 EGGG 304
           EGGG
Sbjct: 301 EGGG 304

[Close]
BLAST of Cla97C03G057800 vs. ExPASy TrEMBL
Match: A0A0A0LVD4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G535790 PE=3 SV=1)

HSP 1 Score: 549.3 bits (1414), Expect = 1.0e-152
Identity = 282/304 (92.76%), Postives = 292/304 (96.05%), Query Frame = 0 

Query: 1   MRSSTATAFHSSFCFSSH-KLSASSSNSHQPNPFLSAKPKTLFHKHPLYTPLHSTLSSQI 60
           M SS+ATAFHSSFCFSSH KLS+S SNSHQPN  LS KPKTL HKHPLYTPLHST+SSQ 
Sbjct: 1   MSSSSATAFHSSFCFSSHNKLSSSPSNSHQPNTSLSPKPKTLLHKHPLYTPLHSTVSSQT 60

Query: 61  KEKILCLEIMGVDAGKALSQNPSLHSVTLESIHSVISFLQSKGIHQKDFAKIFGMCPKIL 120
           KEKILCLEIMGVD+GKALSQNPSLHSVTLESIHSVISFLQSKGIHQKDFAKIFGMCPKIL
Sbjct: 61  KEKILCLEIMGVDSGKALSQNPSLHSVTLESIHSVISFLQSKGIHQKDFAKIFGMCPKIL 120

Query: 121 TSDVKTDLIPVFNFLSEDLKIPDQNFRRAINKCPRLLASSAKDQLKPALFYLQRLGLKDL 180
           TSDVKTDL+PVFNFLSEDLKIPDQNFR+AINKCPRLLASSA+DQLKPALFYLQRLGLKDL
Sbjct: 121 TSDVKTDLVPVFNFLSEDLKIPDQNFRKAINKCPRLLASSAEDQLKPALFYLQRLGLKDL 180

Query: 181 EALAYHDSVLLVSSVEKTLIPKLKYLESLGFSRSETVGMVLRCPALLTFSIENNFKPKFE 240
           EALAYHDSVLLVSSVEKTLIPKLKYLESLGF+RSE VGMVLRCPALLTFSIENNFKPKFE
Sbjct: 181 EALAYHDSVLLVSSVEKTLIPKLKYLESLGFTRSEIVGMVLRCPALLTFSIENNFKPKFE 240

Query: 241 YFSVEMHRKLEELKDFPQYFAFSLEKRIKPRYVETVQSGKKVPLPLMLKTTDDEFRELLT 300
           YFSVEMH+KLEELKDFPQYFAFSLEKRIKPRYVETV+SGKKVPL LMLKTTD EFRELL 
Sbjct: 241 YFSVEMHKKLEELKDFPQYFAFSLEKRIKPRYVETVESGKKVPLSLMLKTTDVEFRELLA 300

Query: 301 EGGG 304
           EGGG
Sbjct: 301 EGGG 304

[Close]
BLAST of Cla97C03G057800 vs. ExPASy TrEMBL
Match: A0A6J1CE81 (transcription termination factor MTEF1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111010694 PE=3 SV=1)

HSP 1 Score: 548.5 bits (1412), Expect = 1.7e-152
Identity = 283/307 (92.18%), Postives = 292/307 (95.11%), Query Frame = 0 

Query: 1   MRSSTATAFHSSFCFSSHKLSA----SSSNSHQPNPFLSAKPKTLFHKHPLYTPLHSTLS 60
           M ++TATAFHSSFCFSSHKLS+    S SNSHQPN  L+AKPKTLFHKHPLYTPLHSTLS
Sbjct: 1   MPAATATAFHSSFCFSSHKLSSSPSNSHSNSHQPNTLLAAKPKTLFHKHPLYTPLHSTLS 60

Query: 61  SQIKEKILCLEIMGVDAGKALSQNPSLHSVTLESIHSVISFLQSKGIHQKDFAKIFGMCP 120
           SQ+KEKILCLEIMGVDAGKALS NPSLHSVTLESIHSVISFLQSKGIHQKDFAKIFGMCP
Sbjct: 61  SQVKEKILCLEIMGVDAGKALSLNPSLHSVTLESIHSVISFLQSKGIHQKDFAKIFGMCP 120

Query: 121 KILTSDVKTDLIPVFNFLSEDLKIPDQNFRRAINKCPRLLASSAKDQLKPALFYLQRLGL 180
           KILTSDVKTDLIPVFNFLSEDLKIPDQ+FRR INKCPRLLASSAKDQLKPALFYLQRLGL
Sbjct: 121 KILTSDVKTDLIPVFNFLSEDLKIPDQSFRRTINKCPRLLASSAKDQLKPALFYLQRLGL 180

Query: 181 KDLEALAYHDSVLLVSSVEKTLIPKLKYLESLGFSRSETVGMVLRCPALLTFSIENNFKP 240
           +DLEALAYHDSVLLVSSVE+TLIPKLKYLESLGFSRSETVGMVLRCPALLTFSIENNFKP
Sbjct: 181 RDLEALAYHDSVLLVSSVERTLIPKLKYLESLGFSRSETVGMVLRCPALLTFSIENNFKP 240

Query: 241 KFEYFSVEMHRKLEELKDFPQYFAFSLEKRIKPRYVETVQSGKKVPLPLMLKTTDDEFRE 300
           KFEYFS EMH KLEELKDFPQYFAFSLEKRIKPRY+ETVQSGKKVPL LMLKTTDDEFRE
Sbjct: 241 KFEYFSGEMHGKLEELKDFPQYFAFSLEKRIKPRYLETVQSGKKVPLSLMLKTTDDEFRE 300

Query: 301 LLTEGGG 304
           LL EG G
Sbjct: 301 LLREGQG 307

[Close]
BLAST of Cla97C03G057800 vs. ExPASy TrEMBL
Match: A0A6J1EFX2 (transcription termination factor MTEF1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111433963 PE=3 SV=1)

HSP 1 Score: 530.0 bits (1364), Expect = 6.4e-147
Identity = 272/298 (91.28%), Postives = 279/298 (93.62%), Query Frame = 0 

Query: 6   ATAFHSSFCFSSHKLSASSSNSHQPNPFLSAKPKTLFHKHPLYTPLHSTLSSQIKEKILC 65
           A AF SSFCFSSH+LSAS SNS QPN FL+AKPK+LFHKHPLYTPLHSTLSSQIKEKILC
Sbjct: 3   AAAFPSSFCFSSHELSASPSNSQQPNTFLAAKPKSLFHKHPLYTPLHSTLSSQIKEKILC 62

Query: 66  LEIMGVDAGKALSQNPSLHSVTLESIHSVISFLQSKGIHQKDFAKIFGMCPKILTSDVKT 125
           LEIMGVDAGKALSQNPSLHSVTLESIHSVISFLQSKGIHQKDFAKIFGMCPKILTSDVK 
Sbjct: 63  LEIMGVDAGKALSQNPSLHSVTLESIHSVISFLQSKGIHQKDFAKIFGMCPKILTSDVKA 122

Query: 126 DLIPVFNFLSEDLKIPDQNFRRAINKCPRLLASSAKDQLKPALFYLQRLGLKDLEALAYH 185
           DLIPVF+FLSEDLKIPDQNFRR INKCPRLLASSAKDQLKPALFYLQRLG KDLEALAY 
Sbjct: 123 DLIPVFSFLSEDLKIPDQNFRRVINKCPRLLASSAKDQLKPALFYLQRLGFKDLEALAYQ 182

Query: 186 DSVLLVSSVEKTLIPKLKYLESLGFSRSETVGMVLRCPALLTFSIENNFKPKFEYFSVEM 245
           DS LLVSSVEKTLIPKLKYL+SLGFSRSETVGMVLRCPALLTFSIENN KPKFEYFS EM
Sbjct: 183 DSALLVSSVEKTLIPKLKYLQSLGFSRSETVGMVLRCPALLTFSIENNLKPKFEYFSGEM 242

Query: 246 HRKLEELKDFPQYFAFSLEKRIKPRYVETVQSGKKVPLPLMLKTTDDEFRELLTEGGG 304
            RK+EELKDFPQYF FSLEKRIKPRYVETVQSGK V LPLMLK TDDEF+ELL E GG
Sbjct: 243 QRKVEELKDFPQYFGFSLEKRIKPRYVETVQSGKNVALPLMLKATDDEFKELLREEGG 300

[Close]
BLAST of Cla97C03G057800 vs. TAIR 10
Match: AT2G34620.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 367.1 bits (941), Expect = 1.4e-101
Identity = 191/297 (64.31%), Postives = 229/297 (77.10%), Query Frame = 0 

Query: 6   ATAFHSSFCFSSHKLSASSSNSHQPNPFLSAKP---KTLFHKHPLYTPLHSTLSSQIKEK 65
           + A  SS   S  K S    +    + FLS KP   KT  H HPL+T    T++ Q+KEK
Sbjct: 2   SAALSSSLYISPKKPSCPQQSQ---STFLSTKPTTIKTNLHSHPLFTVADQTVTLQMKEK 61

Query: 66  ILCLEIMGVDAGKALSQNPSLHSVTLESIHSVISFLQSKGIHQKDFAKIFGMCPKILTSD 125
           ILCLE+MG+D+GKALS NP L S  L+SI SV+ FLQSKGI+  D  +I GMCPKILTSD
Sbjct: 62  ILCLELMGIDSGKALSLNPCLCSAPLDSIQSVLHFLQSKGIYPNDLPRILGMCPKILTSD 121

Query: 126 VKTDLIPVFNFLSEDLKIPDQNFRRAINKCPRLLASSAKDQLKPALFYLQRLGLKDLEAL 185
           V+T+L PVF FLS DL +P+  FRR I KCPRLL SS +DQLKPALFYLQRLGLKDLEAL
Sbjct: 122 VRTELYPVFMFLSNDLHVPENAFRRVIKKCPRLLISSVEDQLKPALFYLQRLGLKDLEAL 181

Query: 186 AYHDSVLLVSSVEKTLIPKLKYLESLGFSRSETVGMVLRCPALLTFSIENNFKPKFEYFS 245
           AY D +LLVSSVE TLIPKL++LES+GFSR E +GM+LRCPAL TFSIENNFKPK +YF 
Sbjct: 182 AYQDPILLVSSVEHTLIPKLRFLESIGFSRPEAIGMILRCPALFTFSIENNFKPKLDYFM 241

Query: 246 VEMHRKLEELKDFPQYFAFSLEKRIKPRYVETVQSGKKVPLPLMLKTTDDEFRELLT 300
            E+  KLE LK+FPQYFAFSLEKRIKPR++E+++ G ++PL LMLK+TD+EF +LLT
Sbjct: 242 SEIKGKLENLKEFPQYFAFSLEKRIKPRHLESMERGLELPLSLMLKSTDEEFEQLLT 295

[Close]
BLAST of Cla97C03G057800 vs. TAIR 10
Match: AT2G03050.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 214.9 bits (546), Expect = 8.8e-56
Identity = 112/242 (46.28%), Postives = 164/242 (67.77%), Query Frame = 0 

Query: 60  KEKILCLEIMGVDAGKALSQNPSLHSVTLESIHSVISFLQSKGIHQKDFAKIFGMCPKIL 119
           +EK++ L+ + VD  KAL  NPSL S  + S+ SV + L S G+ +    +I  M P +L
Sbjct: 33  REKLIYLQDLNVDPHKALRVNPSLRSAPISSVVSVETLLSSTGLSRPAVGRILDMFPDLL 92

Query: 120 TSDVKTDLIPVFNFLSEDLKIPDQNFRRAINKCPRLLASSAKDQLKPALFYLQRLGLKDL 179
           TSD +++++PV  FLS ++ I +Q+  ++I++CPRLL SS   QL+PAL +L+ LG    
Sbjct: 93  TSDPESEILPVLRFLSNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLGFVGR 152

Query: 180 EALAYHDSVLLVSSVEKTLIPKLKYL-ESLGFSRSETVGMVLRCPALLTFSIENNFKPKF 239
           + +   ++VLLVS+VE+TLIPK++YL E LGF+R E   MV+R PALLT+S++NN  PK 
Sbjct: 153 DTITSRNTVLLVSNVERTLIPKIEYLEEGLGFTREEVAKMVVRSPALLTYSVDNNLVPKV 212

Query: 240 EYFSVEMHRKLEELKDFPQYFAFSLEKRIKPRYVETVQSGKKVPLPLMLKTTDDEFRELL 299
           E+F  EM   ++ELK FPQYF+FSLE++IKPR+    + G  +PL  MLK +D +F   L
Sbjct: 213 EFFIEEMRGDVKELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSDGQFNHWL 272

Query: 300 TE 301
            E
Sbjct: 273 LE 274

[Close]
BLAST of Cla97C03G057800 vs. TAIR 10
Match: AT2G36000.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 186.0 bits (471), Expect = 4.4e-47
Identity = 120/311 (38.59%), Postives = 173/311 (55.63%), Query Frame = 0 

Query: 6   ATAFHSSFCFSSHKLSASSSNSHQPN-PFLSAKPKT-----LFHKHPLYTPLHS------ 65
           A +F SS   S H    S S     N P LS KP T      F K P    L S      
Sbjct: 5   ALSFLSSSLPSLHHNFPSLSRLRFNNFPALSFKPNTSSSSSSFFKSPDIPSLSSTTTTTT 64

Query: 66  ---TLSSQIKEKILCLEIMGVDAGKALSQNPSLHSVTLESIHSVISFLQSKGIH--QKDF 125
              TL S I EK++ L+ +G+D    ++++P L S  L ++ SV+ ++ +  I+   +DF
Sbjct: 65  TTETLESSIHEKLIYLDSLGIDFLTLINRHPPLLSTALSAVESVVDYMTTPPINFTLQDF 124

Query: 126 AKIFGMCPKILTSDVKTDLIPVFNFLSEDLKIPD-QNFRRAINKCPRLLASSAKDQLKPA 185
            ++  MCP++LTS + +  IPV  FL  ++ +    + R+A+ + PRLLA S   QL+P 
Sbjct: 125 RRLVSMCPELLTSPLTSHTIPVITFLLREVGVDSIFDLRQALRRRPRLLACSVDHQLRPT 184

Query: 186 LFYLQRLGLKDLEALAYHDSVLLVSSVEKTLIPKLKYLESLGFSRSETVGMVLRCPALLT 245
           L++LQR+G+ D     Y    LL  SV+  L+P++ Y E LGFSR     M  R P L  
Sbjct: 185 LYFLQRIGILDPHKHTY----LLSCSVDNKLVPRIDYFEKLGFSRRSATAMFKRFPQLFN 244

Query: 246 FSIENNFKPKFEYFSVEMHRKLEELKDFPQYFAFSLEKRIKPRYVETVQSGKKVPLPLML 299
           +SI  N++PK +Y  VEM R + E+ +FPQYF+FSLE RIKPR+      G + PLP+ML
Sbjct: 245 YSIAENYEPKLKYLMVEMGRDVREVLEFPQYFSFSLENRIKPRHEACAAKGVRFPLPVML 304

[Close]
BLAST of Cla97C03G057800 vs. TAIR 10
Match: AT2G36000.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 186.0 bits (471), Expect = 4.4e-47
Identity = 120/311 (38.59%), Postives = 173/311 (55.63%), Query Frame = 0 

Query: 6   ATAFHSSFCFSSHKLSASSSNSHQPN-PFLSAKPKT-----LFHKHPLYTPLHS------ 65
           A +F SS   S H    S S     N P LS KP T      F K P    L S      
Sbjct: 5   ALSFLSSSLPSLHHNFPSLSRLRFNNFPALSFKPNTSSSSSSFFKSPDIPSLSSTTTTTT 64

Query: 66  ---TLSSQIKEKILCLEIMGVDAGKALSQNPSLHSVTLESIHSVISFLQSKGIH--QKDF 125
              TL S I EK++ L+ +G+D    ++++P L S  L ++ SV+ ++ +  I+   +DF
Sbjct: 65  TTETLESSIHEKLIYLDSLGIDFLTLINRHPPLLSTALSAVESVVDYMTTPPINFTLQDF 124

Query: 126 AKIFGMCPKILTSDVKTDLIPVFNFLSEDLKIPD-QNFRRAINKCPRLLASSAKDQLKPA 185
            ++  MCP++LTS + +  IPV  FL  ++ +    + R+A+ + PRLLA S   QL+P 
Sbjct: 125 RRLVSMCPELLTSPLTSHTIPVITFLLREVGVDSIFDLRQALRRRPRLLACSVDHQLRPT 184

Query: 186 LFYLQRLGLKDLEALAYHDSVLLVSSVEKTLIPKLKYLESLGFSRSETVGMVLRCPALLT 245
           L++LQR+G+ D     Y    LL  SV+  L+P++ Y E LGFSR     M  R P L  
Sbjct: 185 LYFLQRIGILDPHKHTY----LLSCSVDNKLVPRIDYFEKLGFSRRSATAMFKRFPQLFN 244

Query: 246 FSIENNFKPKFEYFSVEMHRKLEELKDFPQYFAFSLEKRIKPRYVETVQSGKKVPLPLML 299
           +SI  N++PK +Y  VEM R + E+ +FPQYF+FSLE RIKPR+      G + PLP+ML
Sbjct: 245 YSIAENYEPKLKYLMVEMGRDVREVLEFPQYFSFSLENRIKPRHEACAAKGVRFPLPVML 304

[Close]
BLAST of Cla97C03G057800 vs. TAIR 10
Match: AT3G18870.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 150.2 bits (378), Expect = 2.7e-36
Identity = 101/283 (35.69%), Postives = 156/283 (55.12%), Query Frame = 0 

Query: 16  SSHKLSASSSNSHQPNPFLSAKPKTLFHKHPLYTPLHSTLSSQIKEKILCLEIMGVDAGK 75
           S H L   SS S  P+P  S              PL+    +  +E +  L  +G+    
Sbjct: 6   SLHHLQPLSSFSSPPSPSSS-------------KPLYLKFQTSHRENLRHLSSLGI---- 65

Query: 76  ALSQNPSL--HSVTLESIHSVISFLQSKGIHQKDFAKIFGMCPKIL--TSDVKTDLIPVF 135
            + QNP L   +  L  I S ++ L+SKGI  +DF ++  +CP++   T D+ + L PVF
Sbjct: 66  -VPQNPRLAPPANDLSVILSAVNLLKSKGISDEDFPRLVFLCPQLFSPTFDI-SKLDPVF 125

Query: 136 NFLSEDLKIPDQNFRRAINKCPRLLASSAKDQLKPALFYLQRLGLKDLEALAYHDSVLLV 195
           +FL+ +L    +  R  I  CP +L S  +  L+P L YL+ LG+++L   +  ++ +L 
Sbjct: 126 DFLTGELGASAEESRGLIVNCPNILFSDVEYCLRPTLVYLKELGVRNLNRASKTNAHVLN 185

Query: 196 SSVEKTLIPKLKYLESLGFSRSETVGMVLRCPALLTFSIENNFKPKFEYFSVEMHRKLEE 255
           + VEK L  K+++L+S+GF   E   +  R PA+  +S+E+N +PKFE+   +M R+LEE
Sbjct: 186 TRVEK-LRAKMRFLKSIGFEHEEAARVCGRIPAIFGYSVEDNLRPKFEFLVYDMERELEE 245

Query: 256 LKDFPQYFAFSLEKRIKPRYVETVQSGKKVPLPLMLKTTDDEF 295
           LK FPQYFAFSL KRI+PR+    +   +V L  ML   D +F
Sbjct: 246 LKKFPQYFAFSLGKRIRPRHWHLKKKNVRVSLSRMLMWGDQKF 268

The following BLAST results are available for this feature:
BLAST of Cla97C03G057800 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038895185.11.2e-15896.37transcription termination factor MTEF1, chloroplastic [Benincasa hispida][more]
XP_008444692.19.4e-15393.42PREDICTED: transcription termination factor MTEF1, chloroplastic [Cucumis melo] ... [more]
XP_004154376.12.1e-15292.76transcription termination factor MTEF1, chloroplastic [Cucumis sativus] >KGN6587... [more]
XP_022139889.13.6e-15292.18transcription termination factor MTEF1, chloroplastic [Momordica charantia][more]
XP_022927002.11.3e-14691.28transcription termination factor MTEF1, chloroplastic-like [Cucurbita moschata] ... [more]
BLAST of Cla97C03G057800 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q84X531.2e-5446.28Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX... [more]
F4JVI31.1e-2331.06Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O... [more]
F4IHL36.8e-2129.80Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O... [more]
Q9ZT969.2e-1826.01Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana O... [more]
Q9FM807.8e-1723.02Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana O... [more]
BLAST of Cla97C03G057800 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DB894.6e-15393.42Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A1S3BBS54.6e-15393.42transcription termination factor MTEF1, chloroplastic OS=Cucumis melo OX=3656 GN... [more]
A0A0A0LVD41.0e-15292.76Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G535790 PE=3 SV=1[more]
A0A6J1CE811.7e-15292.18transcription termination factor MTEF1, chloroplastic OS=Momordica charantia OX=... [more]
A0A6J1EFX26.4e-14791.28transcription termination factor MTEF1, chloroplastic-like OS=Cucurbita moschata... [more]
BLAST of Cla97C03G057800 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G34620.11.4e-10164.31Mitochondrial transcription termination factor family protein [more]
AT2G03050.18.8e-5646.28Mitochondrial transcription termination factor family protein [more]
AT2G36000.14.4e-4738.59Mitochondrial transcription termination factor family protein [more]
AT2G36000.24.4e-4738.59Mitochondrial transcription termination factor family protein [more]
AT3G18870.12.7e-3635.69Mitochondrial transcription termination factor family protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 216..248
e-value: 2.3E-4
score: 30.5
coord: 74..104
e-value: 7.1
score: 15.6
coord: 249..282
e-value: 0.36
score: 19.9
coord: 146..177
e-value: 0.0021
score: 27.3
coord: 39..72
e-value: 2400.0
score: 1.0
coord: 109..141
e-value: 0.01
score: 25.0
coord: 180..211
e-value: 0.2
score: 20.8
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 51..178
e-value: 1.6E-11
score: 43.7
coord: 189..294
e-value: 4.2E-27
score: 94.9
IPR003690Transcription termination factor, mitochondrial/chloroplasticPANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 11..300
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3D1.25.70.10Transcription termination factor 3, mitochondrialcoord: 148..300
e-value: 6.7E-30
score: 106.1
NoneNo IPR availablePANTHERPTHR13068:SF78MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEINcoord: 11..300

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C03G057800.1Cla97C03G057800.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0071472 cellular response to salt stress
biological_process GO:0009658 chloroplast organization
biological_process GO:0032502 developmental process
biological_process GO:0006353 DNA-templated transcription, termination
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0009507 chloroplast
cellular_component GO:0042646 plastid nucleoid
molecular_function GO:0003690 double-stranded DNA binding
molecular_function GO:0003729 mRNA binding