Cla97C03G056780 (gene) Watermelon (97103) v2.5

Overview
NameCla97C03G056780
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionWound-responsive family protein
LocationCla97Chr03: 5446110 .. 5449500 (+)
RNA-Seq ExpressionCla97C03G056780
SyntenyCla97C03G056780
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCCGTAGATTTTACAAGGGCGAGATCAACGGGATGAAAGATCCAACGGTGAAGCGTGAGCTGATGTTGAAGGGGCTGAGAGATCATCAATATTCGGGATCATCTTCGAATCAGGCAGCGGCAGTGGCGGCCAAGGCGGAGCAACTTAAACGGGCGGAGGAGTCTCTCAGAACGGTTATGTATTTGAGCTGTTGGGGCCCTAACTAAACGTCGTCCTCTTTATTTCCACACAGTCGAGCATATCTCTCAACGTCAAAGCTACGGTTTTCTCAGATTAGATTAGTGACCCTCTGAAATGTGAATAATCATTAATCCACCTACTTCATTTGCAACAAAACGGTAGAGCGACGTCGTTTTGAATGTATAAATGTAAATATGCGCTAGATGTTTTGTTTCCCCAGTTTCCTACCTTTGGGAGCTGTTCAATCAATAAAACTTCTCTTGTATAGTTGCTGTCATATGTCAAATATATGAATGTTTTTATTTTCTCGAACAGATTTAGGTATGTTCATTTTTGGTTGACCTGATCGCAATTACTTTGTTAAAACTCTCTTAAGAAAATTTAATGCCAAATTTTGATTGTTTTAATCATTTACAAATACAAAGGCTTTAACATCCGTTGGGCATTTGTACACGTTATGGGTTAATTTAGGCCAAGGGACAAAGAACAACGTAAAAGAAACAACGGAAGAAGCTTTGGGCTAGAAGATAAGGTCTGGGAGAGAGAGAAGTGGCATGGGCTGAAGCACATGTCACAAGGCTCGACATTAATGGCCCAAGCTGAGGCTAACGTAGAAACATGGCCACAAAGGGTGCCACGCAGGAGGTCCAGCCCAAGGAAAAGATTTAGGTCAAACAACACTAACAACACTAAACCTTGTAAGAAACATAAAATTTCTCTACTTCCTATGTTGTTTCTCCTGCTAAGTCTATGTGGCAAGTACCAATGTTTGTAAAGGAAAAGTTCTCGGGTCCTTTTCTTTTTGGTGGTTCTTTAATTTGGTCCCAAAATTCAAGTTTGTGCGAGCCCATGTTGAATTTCGTGTCACTAATAAATTGTATTTGATACATTCTTAAAATTGCAAAAATCAATTTTTATGTCTACCTAAACAAATGGGTGTATCCAAAGTTTTAGTAATTATCTTAGAGAAGATGACGTGGAATTAACTTTTAAAAAATTATTTTATTTTATAAAATTTTTAAAATAAGGCCTACCTTTTTCATTTTGTTTCTCTTTCCTTCTCCGTCTTCTTCTTCCTCTTCAATTCTGGTTGATGATGTCAAACTTTTTTCTCCTTTCTTTTTTCTTTTTCCTTCCCGTGCTTAAAACAACACACTAGAATTAGGAAGATCTCGTTCCAATAAGGAGCACCTGCTACAACCATATTAAAAAAAGAGTAAGTTGTGATTCTATTAATACACATACTATAGTCGTGACATATAAGTGCCACTTGTTAGGCAAAGTTGATTGTCGAAGGAAGTGTCATGATGTGATTAAAGAGGATGATAAATCTTCTATTAGATTAAAATAAGAGTGGTCATGAAAGTCTCACAGATAAGATTAGAAATGATAGTATCATTGATGTTGTAAGTGACATGTTTAGTGGAGACTAAACGGTGCCTTAACCACAACTTTGAAAGTGCAGGATGCATCGAGTAGTTTCAACAAGTGACTTTAAAGTTAGATGCATATTGATGTGATATGTGTAACCATGTAAAATTTCATAATAGAAGATTAGGTAGTGCTCTTAGAGTGACTCTTCCCACTTGCCATGTGCAAGAGAGACATAAAAATAGCTCAAAATGTATTGTAGGAGAAAACCATGGTATAAGCTCTCCACTAACATTAGGCCTCAATGACCTAAGTTAGCTACCCTCAGCGAGCATCGCAAAACAAGTGTTCTTAGTTGTTTTCTGTTGATAATGTGAACTCATGGATAGTGTCAACATTGAACCCCATGGGTCAAAAATTTCGGTACAGCCTTGAGCTAGAGCTTGGTATGTATAAATGACTTGGCATGGATTATCAAACTATATAGTACAAGAAAAATGGTTTTTGCCCACGCCACAAAAGAATTCGGAGAAAGGTCCTAATGTCGATACCTACTATGGCGTCGACATAGCTTAGAAACCATGACACCACATTTAGGTGGTGTTGAGATAGTTAGCCTATTCTGATGTCAAAAACGTGGCGTCGGGTTAGGTGCACGTAATATTAATTTATGTTATATAAATAAATTATCTTTAAACTAAGAAATAAGAGGGAAAAAGCTAAAATTAAAAAAATATATATATATAAGGAATGAAAAACGAACTAGTTATCAAATAAGTTTATAAGTTTATGTTTTTATTTGTTTTTTTTAAAAAAATAAAAAATAAAATAATTAACAAATATATTTTTATTTTAAATTATTAAAAAACAAGAAACAAGAAATGAGAATATTATAAAATGAGACTTAGATTTTCACGAGGATGAGAACACACATGTTCAAATCGATGAATGCACAATCTCAATTCTTCATAGTATTATACATGGTAGTTTTGTTTGTCATTTTTTCAAAGTTTTGTTGGCCTTCTTCTAGTATGTTGTCTAAACATATAATAATAAATAATTTAAAGATAGAGTTAAGTTTGAAGAACTAAATTTGGGATTCAGTGTGAGAAATAAAAAATAAAACCAAAATACCCGGGTAGTAAAATTCCATAATATAGCACAAAAAATATTGTTATATAAATAAATTAATAAAAGAAAAGATAAAATTATTGTTATATTGTAATATGTTAACATGGGTTAAAATATAACACAAGGGGTTGGTGCAGGGTATCTGACCTGCATTTCAGACAAATGCTTCCCCCTTCTGCCATTAATCCAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAGCCAATGGTAATAGATACAAAACCAGGGATTTTAAAGAATGGTATATTATTAATTCTTCGATAATCCCAAAACCAGTCTTCCTATCCTTAAACTGAACTCATTTGTGTTTATATAGGTCAGAAAGCAAAGGAAGCTGGAAAAGAAACAGAATTCCCCTTATCCACAGTTTAACAAGTTGATGCTGTGAGAGATGAGTTGAGAATGGAGGGAAAAATGAGCTATTTGAGGCGAGCTTGGATGGGTGCGGCGGGTGTGAGTGTGCTTGAAACTGCCCACGCCAATGATCAATTCTCCAAATGGAATTCTTCAGAGACTGTTTTTCAGTCGAAGCTGCGGCGGTTTCAGAATGAGGAGACGGCGGCGGAAGTTGGCGGTGATGGAAAAGAAGATAGGGGAAAGGAGATGAAGACTGAAGATTCTCTTCATAAAGTCATATACTTGAATTGTTGGACACAAAGCTGA

mRNA sequence

ATGAGCCGTAGATTTTACAAGGGCGAGATCAACGGGATGAAAGATCCAACGGTGAAGCGTGAGCTGATGTTGAAGGGGCTGAGAGATCATCAATATTCGGGATCATCTTCGAATCAGGCAGCGGCAGTGGCGGCCAAGGCGGAGCAACTTAAACGGGCGGAGGAGTCTCTCAGAACGGTTATGCCAAGGGACAAAGAACAACGTAAAAGAAACAACGGAAGAAGCTTTGGGCTAGAAGATAAGGTCTGGGAGAGAGAGAAGTGGCATGGGCTGAAGCACATGTCACAAGGCTCGACATTAATGGCCCAAGCTGAGGCTAACGTAGAAACATGGCCACAAAGGGTGCCACGCAGGAGGTCCAGCCCAAGGAAAAGATTTAGGTCAAACAACACTAACAACACTAAACCTTTTGATGCTGTGAGAGATGAGTTGAGAATGGAGGGAAAAATGAGCTATTTGAGGCGAGCTTGGATGGGTGCGGCGGGTGTGAGTGTGCTTGAAACTGCCCACGCCAATGATCAATTCTCCAAATGGAATTCTTCAGAGACTGTTTTTCAGTCGAAGCTGCGGCGGTTTCAGAATGAGGAGACGGCGGCGGAAGTTGGCGGTGATGGAAAAGAAGATAGGGGAAAGGAGATGAAGACTGAAGATTCTCTTCATAAAGTCATATACTTGAATTGTTGGACACAAAGCTGA

Coding sequence (CDS)

ATGAGCCGTAGATTTTACAAGGGCGAGATCAACGGGATGAAAGATCCAACGGTGAAGCGTGAGCTGATGTTGAAGGGGCTGAGAGATCATCAATATTCGGGATCATCTTCGAATCAGGCAGCGGCAGTGGCGGCCAAGGCGGAGCAACTTAAACGGGCGGAGGAGTCTCTCAGAACGGTTATGCCAAGGGACAAAGAACAACGTAAAAGAAACAACGGAAGAAGCTTTGGGCTAGAAGATAAGGTCTGGGAGAGAGAGAAGTGGCATGGGCTGAAGCACATGTCACAAGGCTCGACATTAATGGCCCAAGCTGAGGCTAACGTAGAAACATGGCCACAAAGGGTGCCACGCAGGAGGTCCAGCCCAAGGAAAAGATTTAGGTCAAACAACACTAACAACACTAAACCTTTTGATGCTGTGAGAGATGAGTTGAGAATGGAGGGAAAAATGAGCTATTTGAGGCGAGCTTGGATGGGTGCGGCGGGTGTGAGTGTGCTTGAAACTGCCCACGCCAATGATCAATTCTCCAAATGGAATTCTTCAGAGACTGTTTTTCAGTCGAAGCTGCGGCGGTTTCAGAATGAGGAGACGGCGGCGGAAGTTGGCGGTGATGGAAAAGAAGATAGGGGAAAGGAGATGAAGACTGAAGATTCTCTTCATAAAGTCATATACTTGAATTGTTGGACACAAAGCTGA

Protein sequence

MSRRFYKGEINGMKDPTVKRELMLKGLRDHQYSGSSSNQAAAVAAKAEQLKRAEESLRTVMPRDKEQRKRNNGRSFGLEDKVWEREKWHGLKHMSQGSTLMAQAEANVETWPQRVPRRRSSPRKRFRSNNTNNTKPFDAVRDELRMEGKMSYLRRAWMGAAGVSVLETAHANDQFSKWNSSETVFQSKLRRFQNEETAAEVGGDGKEDRGKEMKTEDSLHKVIYLNCWTQS
Homology
[Close]
BLAST of Cla97C03G056780 vs. NCBI nr
Match: KAG6584036.1 (hypothetical protein SDJN03_19968, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 146.4 bits (368), Expect = 3.1e-31
Identity = 116/246 (47.15%), Postives = 134/246 (54.47%), Query Frame = 0 

Query: 1   MSRRFYKGEINGMKDPTVKRELMLKGLRDHQYSGSSSNQ-----------AAAVAAKAEQ 60
           MSRRFYKGEI+GMKDPT KRE MLK +RDH  SGSSSNQ           +AA+AAKAE+
Sbjct: 1   MSRRFYKGEISGMKDPTAKREAMLKAVRDH--SGSSSNQGARGFYSGMDSSAAMAAKAEK 60

Query: 61  LKRAEESLRTVMPRDKEQRKRNNGRSFGLEDKVWEREKWHGLKHMSQGSTLMAQAEANVE 120
           LKRAEESLR  +       ++  GRS     K  ER    G                 VE
Sbjct: 61  LKRAEESLRKFI-------RKMVGRS----KKRIERRGHKG-----------------VE 120

Query: 121 TWPQRVPRRRSSPRKRFRSNNTNNTKPFDAVRDELRMEGKMSYLRRAWMGAAGVSVLETA 180
            W  R              N     K             KMSYL RA M AA V+V+E  
Sbjct: 121 DWQNR--------------NQEEGRK-------------KMSYLSRACMAAASVAVVEGG 180

Query: 181 HANDQFSKWNSSETVFQSKLRRFQNEETAAEVGGDGKEDRGKE----MKTEDSLHKVIYL 232
           HA D FSKWN SET+F+SK RRFQNE+TA++  G G    GK+    +K EDSLHKV+YL
Sbjct: 181 HA-DHFSKWN-SETLFRSK-RRFQNEDTASQELGAGSTGIGKDGEKVVKAEDSLHKVMYL 186

[Close]
BLAST of Cla97C03G056780 vs. NCBI nr
Match: KAG7019648.1 (hypothetical protein SDJN02_18611, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 93.2 bits (230), Expect = 3.1e-15
Identity = 54/86 (62.79%), Postives = 64/86 (74.42%), Query Frame = 0 

Query: 150 MSYLRRAWMGAAGVSVLETAHANDQFSKWNSSETVFQSKLRRFQNEETAAEVGGDGKEDR 209
           MSYL RA M AA V+V+E  HA D FSKWN SET+F+SK RRFQNE+TA++  G G    
Sbjct: 1   MSYLSRACMAAASVAVVEGGHA-DHFSKWN-SETLFRSK-RRFQNEDTASQELGAGSTGI 60

Query: 210 GKE----MKTEDSLHKVIYLNCWTQS 232
           GK+    +K EDSLHKV+YLNCWTQS
Sbjct: 61  GKDGEKVVKAEDSLHKVMYLNCWTQS 83

[Close]
BLAST of Cla97C03G056780 vs. NCBI nr
Match: KAG7019649.1 (hypothetical protein SDJN02_18612, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 87.0 bits (214), Expect = 2.3e-13
Identity = 51/72 (70.83%), Postives = 56/72 (77.78%), Query Frame = 0 

Query: 1  MSRRFYKGEINGMKDPTVKRELMLKGLRDHQYSGSSSNQ-----------AAAVAAKAEQ 60
          MSRRFYKGEI+GMKDPT KRE MLK +RDH  SGSSSNQ           +AA+AAKAE+
Sbjct: 1  MSRRFYKGEISGMKDPTAKREAMLKAVRDH--SGSSSNQGARGFYSGMDSSAAMAAKAEK 60

Query: 61 LKRAEESLRTVM 62
          LKRAEESLRTVM
Sbjct: 61 LKRAEESLRTVM 70

[Close]
BLAST of Cla97C03G056780 vs. NCBI nr
Match: KAA0056938.1 (hypothetical protein E6C27_scaffold96G001150 [Cucumis melo var. makuwa])

HSP 1 Score: 68.6 bits (166), Expect = 8.3e-08
Identity = 46/102 (45.10%), Postives = 59/102 (57.84%), Query Frame = 0 

Query: 158 MGAAGVSVLETAHANDQ---FSKWNS---SETVFQSKLRRFQ--NEETAAEV-------- 217
           MGAA V V+E++HAN+    FSKWN+    ++VFQSKL  FQ  +E  AA+         
Sbjct: 1   MGAASVGVMESSHANNDQYFFSKWNNYFDDQSVFQSKLLSFQQNDEGKAAQKLGARSSSH 60

Query: 218 -----------GGDGKEDRGKEM-KTEDSLHKVIYLNCWTQS 232
                      GG G    GK++ + EDSLHKV+YLNCWTQS
Sbjct: 61  KYGKDGGGGGGGGGGGGGGGKDIDRAEDSLHKVMYLNCWTQS 102

[Close]
BLAST of Cla97C03G056780 vs. NCBI nr
Match: KGN64622.1 (hypothetical protein Csa_013237 [Cucumis sativus])

HSP 1 Score: 55.8 bits (133), Expect = 5.6e-04
Identity = 38/60 (63.33%), Postives = 43/60 (71.67%), Query Frame = 0 

Query: 13 MKDPTVKRELMLKG-LRDH--------QYSGSSSNQAA--AVAAKAEQLKRAEESLRTVM 62
          MKDPT+K+E ML+G LRDH         +S SSSNQ A   V +KAEQLKRAEESLRTVM
Sbjct: 1  MKDPTLKQEPMLEGPLRDHHHHHHRRRHHSESSSNQTAVPVVLSKAEQLKRAEESLRTVM 60

[Close]
BLAST of Cla97C03G056780 vs. ExPASy TrEMBL
Match: A0A0A0LS84 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G071860 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 7.8e-12
Identity = 52/97 (53.61%), Postives = 64/97 (65.98%), Query Frame = 0 

Query: 150 MSYLRRAWMGAAGVSVLETAHA-NDQFSKWNSSETVFQSKLRRFQNE---ETAAEVG--- 209
           MSYLRRAWMGAA V V+E+++A NDQ+        VFQSKL++FQ     + A E+G   
Sbjct: 1   MSYLRRAWMGAASVGVMESSYASNDQY-------FVFQSKLQQFQQNGEGKAAQELGARS 60

Query: 210 -----GDGKED--RGKEM-KTEDSLHKVIYLNCWTQS 232
                G G E   RGKE+ + EDSLHKV+YLNCWTQS
Sbjct: 61  SFHKYGKGGEGGRRGKEIHRAEDSLHKVMYLNCWTQS 90

[Close]
BLAST of Cla97C03G056780 vs. ExPASy TrEMBL
Match: A0A5A7UPA3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G001150 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 4.0e-08
Identity = 46/102 (45.10%), Postives = 59/102 (57.84%), Query Frame = 0 

Query: 158 MGAAGVSVLETAHANDQ---FSKWNS---SETVFQSKLRRFQ--NEETAAEV-------- 217
           MGAA V V+E++HAN+    FSKWN+    ++VFQSKL  FQ  +E  AA+         
Sbjct: 1   MGAASVGVMESSHANNDQYFFSKWNNYFDDQSVFQSKLLSFQQNDEGKAAQKLGARSSSH 60

Query: 218 -----------GGDGKEDRGKEM-KTEDSLHKVIYLNCWTQS 232
                      GG G    GK++ + EDSLHKV+YLNCWTQS
Sbjct: 61  KYGKDGGGGGGGGGGGGGGGKDIDRAEDSLHKVMYLNCWTQS 102

[Close]
BLAST of Cla97C03G056780 vs. ExPASy TrEMBL
Match: A0A0A0LV05 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G071850 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 2.7e-04
Identity = 38/60 (63.33%), Postives = 43/60 (71.67%), Query Frame = 0 

Query: 13 MKDPTVKRELMLKG-LRDH--------QYSGSSSNQAA--AVAAKAEQLKRAEESLRTVM 62
          MKDPT+K+E ML+G LRDH         +S SSSNQ A   V +KAEQLKRAEESLRTVM
Sbjct: 1  MKDPTLKQEPMLEGPLRDHHHHHHRRRHHSESSSNQTAVPVVLSKAEQLKRAEESLRTVM 60

[Close]
BLAST of Cla97C03G056780 vs. TAIR 10
Match: AT4G28240.1 (Wound-responsive family protein )

HSP 1 Score: 43.1 bits (100), Expect = 3.5e-04
Identity = 28/85 (32.94%), Postives = 43/85 (50.59%), Query Frame = 0 

Query: 150 MSYLRRAWMGAAGVSVLETAHANDQFSKWNSSETVFQSKLRRFQNEETAAEVGGDG--KE 209
           MSYL + WM A+ V+V   A    +     +S    Q +L        AA++ GD    E
Sbjct: 1   MSYLNKVWMAASFVAVQGNADHGVKLKSGLTSAHRLQRRLSSDLRPLAAADLTGDSLPSE 60

Query: 210 DRGKEMKT--EDSLHKVIYLNCWTQ 231
           +R +   +  ++SL +V+YLNCW Q
Sbjct: 61  ERRRTSSSTPDESLRQVMYLNCWAQ 85

The following BLAST results are available for this feature:
BLAST of Cla97C03G056780 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6584036.13.1e-3147.15hypothetical protein SDJN03_19968, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7019648.13.1e-1562.79hypothetical protein SDJN02_18611, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG7019649.12.3e-1370.83hypothetical protein SDJN02_18612, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAA0056938.18.3e-0845.10hypothetical protein E6C27_scaffold96G001150 [Cucumis melo var. makuwa][more]
KGN64622.15.6e-0463.33hypothetical protein Csa_013237 [Cucumis sativus][more]
BLAST of Cla97C03G056780 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cla97C03G056780 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LS847.8e-1253.61Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G071860 PE=4 SV=1[more]
A0A5A7UPA34.0e-0845.10Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0LV052.7e-0463.33Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G071850 PE=4 SV=1[more]
BLAST of Cla97C03G056780 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G28240.13.5e-0432.94Wound-responsive family protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022251Protein of unknown function wound-inducedPFAMPF12609DUF3774coord: 168..230
e-value: 1.2E-6
score: 29.4
IPR022251Protein of unknown function wound-inducedPANTHERPTHR33090DUF3774 DOMAIN PROTEIN-RELATEDcoord: 150..231
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 195..214
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 106..136
NoneNo IPR availablePANTHERPTHR33090:SF38DUF3774 DOMAIN PROTEINcoord: 150..231

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C03G056780.2Cla97C03G056780.2mRNA