Cla97C03G055650 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C03G055650
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	Natterin-3 like
Location	Cla97Chr03: 4616834 .. 4617981 (+)
RNA-Seq Expression	Cla97C03G055650
Synteny	Cla97C03G055650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGATGGCAGTCAGACTGCACAAAAGATAGGTGATGCCTGCTTGCACCTAAGTTTTTCCCAACTTATATATATACACACGAAATCCATCAATTTAGTGGATCCACTCTGCACATAGTTATTCTATCAATGTTTGTCACATGTCAATCTTGAATTTTTTTATATAATGATCTAGTCTCTATATTTTCAATTTTGGATCAATTTAGTCCATGTACTTTCAATTTTGGATCAATTTAGTCCTTAAACTTTACTATTTAACAACTTAGTCCTTGTACTTTGACCGTTGTAATGATGTAGTCCCTATTGTAGAAATTAGTGTTAAAGTTTAATGAGATTTCTTGCATAAATACGCATAAACTAACTAAAGACTCAATAAATTTACAAAATACAAAGTCTACATCATAAAATAATAAAAATTGACATATAATTTTAATGATTTTTTATTTTTTTATGTTAAGGACTAAATTGTTACAAATTTGAAGTGCAATTACTAAATTGTTAGATACTAAAGTTCAAAGACTAAATTGTTAAAAAATTAAAAGTATAGGGACCAAATCATTTACAAACTAAATTACAGATACTAATTGTTATTTTCATAAAAGTTTAGGACTATAGTTTCTTTTAACAATTTTTTTTTTTACTATGATTAAAAGGGATGCATGAAGAGCAATGCAATCAATTATTACTCAAATAACATCACAGTTCGATTGTGGTGTAGGTTGCAGCAACCTGCTGTGATTGATGTGAAACTTTCGTACTACGACACAAGGGTAAGCTCTTGGAACTCTACTGTTTCGATGAAGCTAGATGTGGAAACAAGCATTATCAAATCGGGTGTTCCTACAATTTTTGAAGATAAGCTTGCGATTGGATCAGAGTTTTCAAGAGAATATGAATGGGGAGAAGCAAAGAACTTGACGGAGAAGGTGGATGTTGTGCACAGGGTTCTAGTGCAGCCATTGAGGAAGGTTAAAGTGAATTTGGTGGCCACACAAGCTTCATACGATGTGCCATTCTCTTACACACAGAACGATACTCTCATCAATGGCCAAAACATTACACTGAACATGGAAGATGGCATTTACAATGGAGTCAATATTTACAACTTTAAGTTTGATCAAGAATCGTCGCAGTTGTGCGAATGTTGA

mRNA sequence

ATGGGATGGCAGTCAGACTGCACAAAAGATAGGTTGCAGCAACCTGCTGTGATTGATGTGAAACTTTCGTACTACGACACAAGGGTAAGCTCTTGGAACTCTACTGTTTCGATGAAGCTAGATGTGGAAACAAGCATTATCAAATCGGGTGTTCCTACAATTTTTGAAGATAAGCTTGCGATTGGATCAGAGTTTTCAAGAGAATATGAATGGGGAGAAGCAAAGAACTTGACGGAGAAGGTGGATGTTGTGCACAGGGTTCTAGTGCAGCCATTGAGGAAGGTTAAAGTGAATTTGGTGGCCACACAAGCTTCATACGATGTGCCATTCTCTTACACACAGAACGATACTCTCATCAATGGCCAAAACATTACACTGAACATGGAAGATGGCATTTACAATGGAGTCAATATTTACAACTTTAAGTTTGATCAAGAATCGTCGCAGTTGTGCGAATGTTGA

Coding sequence (CDS)

ATGGGATGGCAGTCAGACTGCACAAAAGATAGGTTGCAGCAACCTGCTGTGATTGATGTGAAACTTTCGTACTACGACACAAGGGTAAGCTCTTGGAACTCTACTGTTTCGATGAAGCTAGATGTGGAAACAAGCATTATCAAATCGGGTGTTCCTACAATTTTTGAAGATAAGCTTGCGATTGGATCAGAGTTTTCAAGAGAATATGAATGGGGAGAAGCAAAGAACTTGACGGAGAAGGTGGATGTTGTGCACAGGGTTCTAGTGCAGCCATTGAGGAAGGTTAAAGTGAATTTGGTGGCCACACAAGCTTCATACGATGTGCCATTCTCTTACACACAGAACGATACTCTCATCAATGGCCAAAACATTACACTGAACATGGAAGATGGCATTTACAATGGAGTCAATATTTACAACTTTAAGTTTGATCAAGAATCGTCGCAGTTGTGCGAATGTTGA

Protein sequence

MGWQSDCTKDRLQQPAVIDVKLSYYDTRVSSWNSTVSMKLDVETSIIKSGVPTIFEDKLAIGSEFSREYEWGEAKNLTEKVDVVHRVLVQPLRKVKVNLVATQASYDVPFSYTQNDTLINGQNITLNMEDGIYNGVNIYNFKFDQESSQLCEC

Homology

[Close]

BLAST of Cla97C03G055650 vs. NCBI nr
Match: XP_004140685.1 (uncharacterized protein LOC101213433 [Cucumis sativus] >KGN46323.1 hypothetical protein Csa_005199 [Cucumis sativus])

HSP 1 Score: 206.5 bits (524), Expect = 1.7e-49
Identity = 104/139 (74.82%), Postives = 120/139 (86.33%), Query Frame = 0


Query: 9   KDRLQQPAVIDVKLSYYDTRVSSWNSTVSMKLDVETSIIKSGVPTIFEDKLAIGSE-FSR 68
           ++R +Q AVIDVKLSY DTRVS+W+STVS KLDVETS+IKS VP IFE+ LAIG E FS 
Sbjct: 333 ENRTKQLAVIDVKLSYNDTRVSAWSSTVSAKLDVETSVIKSSVPIIFEETLAIGPELFSG 392

Query: 69  EYEWGEAKNLTEKVDVVHRVLVQPLRKVKVNLVATQASYDVPFSYTQNDTLINGQNITLN 128
           EY+WGE  NLT+KVD VH+VLVQP   V+VNLVATQASYDVPFSYTQNDTLI+G+ I+LN
Sbjct: 393 EYDWGEDTNLTKKVDTVHKVLVQPCSNVRVNLVATQASYDVPFSYTQNDTLISGEKISLN 452

Query: 129 MEDGIYNGVNIYNFKFDQE 147
           MEDGIY GVN+YNFKF+ E
Sbjct: 453 MEDGIYKGVNLYNFKFETE 471

[Close]

BLAST of Cla97C03G055650 vs. NCBI nr
Match: KAA0039927.1 (uncharacterized protein E6C27_scaffold122G002070 [Cucumis melo var. makuwa] >TYK24574.1 uncharacterized protein E5676_scaffold266G001190 [Cucumis melo var. makuwa])

HSP 1 Score: 189.1 bits (479), Expect = 2.8e-44
Identity = 99/147 (67.35%), Postives = 118/147 (80.27%), Query Frame = 0


Query: 9   KDRLQQPAVIDVKLSYYDTRVSSWNSTVSMKLDVETSIIKSGVPTIFEDKLAIGSE-FSR 68
           ++R  QP VI VKLSY +TRVS+W+STVS+KL+VET +I+S +P IFE+ LAIG E FS 
Sbjct: 334 ENRSDQPDVIAVKLSYNNTRVSAWSSTVSVKLNVETCVIESSIPIIFEETLAIGPESFSG 393

Query: 69  EYEWGEAKNLTEKVDVVHRVLVQPLRKVKVNLVATQASYDVPFSYTQNDTLINGQNI-TL 128
           EY+WGE KNLT+KV+ VH+VLVQP  KV+VNLVATQASYDVPFSYTQNDTLI+   I T 
Sbjct: 394 EYDWGEDKNLTKKVETVHKVLVQPCSKVRVNLVATQASYDVPFSYTQNDTLISSNLITTY 453

Query: 129 NMEDGIYNGVNIYNFKFDQESSQLCEC 154
            MEDGIY GVNIYNFKF++     C C
Sbjct: 454 KMEDGIYKGVNIYNFKFEETD---CGC 477

[Close]

BLAST of Cla97C03G055650 vs. NCBI nr
Match: XP_008460024.1 (PREDICTED: uncharacterized protein LOC103498962 [Cucumis melo])

HSP 1 Score: 188.3 bits (477), Expect = 4.8e-44
Identity = 98/147 (66.67%), Postives = 118/147 (80.27%), Query Frame = 0


Query: 9   KDRLQQPAVIDVKLSYYDTRVSSWNSTVSMKLDVETSIIKSGVPTIFEDKLAIGSE-FSR 68
           ++R  QP VI VKLSY +TRVS+W+STVS+KL+VET +I+S +P IFE+ LAIG E FS 
Sbjct: 334 ENRSDQPDVIAVKLSYNNTRVSAWSSTVSVKLNVETCVIESSIPIIFEETLAIGPESFSG 393

Query: 69  EYEWGEAKNLTEKVDVVHRVLVQPLRKVKVNLVATQASYDVPFSYTQNDTLINGQNI-TL 128
           EY+WGE KNLT+KV+ VH+VLVQP  KV+VNLVATQASYDVPFSYTQNDTLI+   I T 
Sbjct: 394 EYDWGEDKNLTKKVETVHKVLVQPCSKVRVNLVATQASYDVPFSYTQNDTLISSNLITTY 453

Query: 129 NMEDGIYNGVNIYNFKFDQESSQLCEC 154
            MEDGIY GVN+YNFKF++     C C
Sbjct: 454 KMEDGIYKGVNLYNFKFEETD---CGC 477

[Close]

BLAST of Cla97C03G055650 vs. NCBI nr
Match: GFY94439.1 (hypothetical protein Acr_09g0008850 [Actinidia rufa])

HSP 1 Score: 152.1 bits (383), Expect = 3.8e-33
Identity = 71/141 (50.35%), Postives = 106/141 (75.18%), Query Frame = 0


Query: 10  DRLQQPAVIDVKLSYYDTRVSSWNSTVSMKLDVETSIIKSGVPTIFEDKLAIGSEFSREY 69
           +R Q+P  ID+KLSY DTR S+WN+ +S+KL V+TS +++G+P I E K+ I +EFS  Y
Sbjct: 295 NRSQEPNTIDMKLSYTDTRSSTWNANISLKLGVKTS-VQTGIPLIAEGKVEISAEFSGAY 354

Query: 70  EWGEAKNLTEKVDVVHRVLVQPLRKVKVNLVATQASYDVPFSYTQNDTLINGQNITLNME 129
           +WGE ++ T  ++ V++V V P+  VKV+L+AT+ S DVPFSY+Q DTLINGQ  T +M+
Sbjct: 355 QWGETQSSTTVMETVYKVTVPPMTMVKVSLLATKGSCDVPFSYSQRDTLINGQQTTHHMD 414

Query: 130 DGIYNGVNIYNFKFDQESSQL 151
           DG+Y G+N +NFK++ +  +L
Sbjct: 415 DGVYTGMNCFNFKYETKQEKL 434

[Close]

BLAST of Cla97C03G055650 vs. NCBI nr
Match: XP_028088021.1 (uncharacterized protein LOC114288663 [Camellia sinensis])

HSP 1 Score: 151.4 bits (381), Expect = 6.5e-33
Identity = 71/138 (51.45%), Postives = 101/138 (73.19%), Query Frame = 0


Query: 13  QQPAVIDVKLSYYDTRVSSWNSTVSMKLDVETSIIKSGVPTIFEDKLAIGSEFSREYEWG 72
           Q+P  ID+KLSY DTR S+WN++VS+KL V+T+  ++GVP I E K+ + +E +  YEWG
Sbjct: 335 QEPNTIDMKLSYTDTRTSTWNASVSVKLGVKTT-FQTGVPFIAEGKIEVSAEINSAYEWG 394

Query: 73  EAKNLTEKVDVVHRVLVQPLRKVKVNLVATQASYDVPFSYTQNDTLINGQNITLNMEDGI 132
           E    T  V+ V++V V P+ +VKV+L+AT+ S DVPFSYTQ DTL NG+ IT NM+DG+
Sbjct: 395 ETITSTSVVETVYKVTVPPMTRVKVSLLATRGSCDVPFSYTQQDTLTNGKQITYNMDDGV 454

Query: 133 YNGVNIYNFKFDQESSQL 151
           Y G+N +NFK++    +L
Sbjct: 455 YTGINCFNFKYETRQEKL 471

[Close]

BLAST of Cla97C03G055650 vs. ExPASy Swiss-Prot
Match: Q66S17 (Natterin-3 OS=Thalassophryne nattereri OX=289382 PE=1 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 8.5e-04
Identity = 35/116 (30.17%), Postives = 55/116 (47.41%), Query Frame = 0


Query: 31  SWNSTVSMKLDVETSIIKSGVPTIFEDKLAIGSEFSREYEWGE--AKNLTEKVDVVHRVL 90
           SW+ T ++   VE+S I +G+P I    +++  E S     G    K  T  V V+  V 
Sbjct: 240 SWDVTSTVTFGVESS-ITAGIPDIASATVSVSVETSLSVSLGSTTTKTTTHTVSVI--VT 299

Query: 91  VQPLRKVKVNLVATQASYDVPFSYTQNDTLINGQNITLNMEDGIYNGVNIYNFKFD 145
           V P     V +VAT+ + D+PF+     T  NGQ  T ++  G Y  + +   + D
Sbjct: 300 VPPNHYCPVTMVATKYTADIPFTGKMTRTYRNGQKRTTSI-TGTYRAIQVGEIRAD 351

[Close]

BLAST of Cla97C03G055650 vs. ExPASy TrEMBL
Match: A0A0A0KA14 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G084570 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 8.2e-50
Identity = 104/139 (74.82%), Postives = 120/139 (86.33%), Query Frame = 0


Query: 9   KDRLQQPAVIDVKLSYYDTRVSSWNSTVSMKLDVETSIIKSGVPTIFEDKLAIGSE-FSR 68
           ++R +Q AVIDVKLSY DTRVS+W+STVS KLDVETS+IKS VP IFE+ LAIG E FS 
Sbjct: 333 ENRTKQLAVIDVKLSYNDTRVSAWSSTVSAKLDVETSVIKSSVPIIFEETLAIGPELFSG 392

Query: 69  EYEWGEAKNLTEKVDVVHRVLVQPLRKVKVNLVATQASYDVPFSYTQNDTLINGQNITLN 128
           EY+WGE  NLT+KVD VH+VLVQP   V+VNLVATQASYDVPFSYTQNDTLI+G+ I+LN
Sbjct: 393 EYDWGEDTNLTKKVDTVHKVLVQPCSNVRVNLVATQASYDVPFSYTQNDTLISGEKISLN 452

Query: 129 MEDGIYNGVNIYNFKFDQE 147
           MEDGIY GVN+YNFKF+ E
Sbjct: 453 MEDGIYKGVNLYNFKFETE 471

[Close]

BLAST of Cla97C03G055650 vs. ExPASy TrEMBL
Match: A0A5D3DLV2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001190 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 1.4e-44
Identity = 99/147 (67.35%), Postives = 118/147 (80.27%), Query Frame = 0


Query: 9   KDRLQQPAVIDVKLSYYDTRVSSWNSTVSMKLDVETSIIKSGVPTIFEDKLAIGSE-FSR 68
           ++R  QP VI VKLSY +TRVS+W+STVS+KL+VET +I+S +P IFE+ LAIG E FS 
Sbjct: 334 ENRSDQPDVIAVKLSYNNTRVSAWSSTVSVKLNVETCVIESSIPIIFEETLAIGPESFSG 393

Query: 69  EYEWGEAKNLTEKVDVVHRVLVQPLRKVKVNLVATQASYDVPFSYTQNDTLINGQNI-TL 128
           EY+WGE KNLT+KV+ VH+VLVQP  KV+VNLVATQASYDVPFSYTQNDTLI+   I T 
Sbjct: 394 EYDWGEDKNLTKKVETVHKVLVQPCSKVRVNLVATQASYDVPFSYTQNDTLISSNLITTY 453

Query: 129 NMEDGIYNGVNIYNFKFDQESSQLCEC 154
            MEDGIY GVNIYNFKF++     C C
Sbjct: 454 KMEDGIYKGVNIYNFKFEETD---CGC 477

[Close]

BLAST of Cla97C03G055650 vs. ExPASy TrEMBL
Match: A0A1S3CB39 (uncharacterized protein LOC103498962 OS=Cucumis melo OX=3656 GN=LOC103498962 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 2.3e-44
Identity = 98/147 (66.67%), Postives = 118/147 (80.27%), Query Frame = 0


Query: 9   KDRLQQPAVIDVKLSYYDTRVSSWNSTVSMKLDVETSIIKSGVPTIFEDKLAIGSE-FSR 68
           ++R  QP VI VKLSY +TRVS+W+STVS+KL+VET +I+S +P IFE+ LAIG E FS 
Sbjct: 334 ENRSDQPDVIAVKLSYNNTRVSAWSSTVSVKLNVETCVIESSIPIIFEETLAIGPESFSG 393

Query: 69  EYEWGEAKNLTEKVDVVHRVLVQPLRKVKVNLVATQASYDVPFSYTQNDTLINGQNI-TL 128
           EY+WGE KNLT+KV+ VH+VLVQP  KV+VNLVATQASYDVPFSYTQNDTLI+   I T 
Sbjct: 394 EYDWGEDKNLTKKVETVHKVLVQPCSKVRVNLVATQASYDVPFSYTQNDTLISSNLITTY 453

Query: 129 NMEDGIYNGVNIYNFKFDQESSQLCEC 154
            MEDGIY GVN+YNFKF++     C C
Sbjct: 454 KMEDGIYKGVNLYNFKFEETD---CGC 477

[Close]

BLAST of Cla97C03G055650 vs. ExPASy TrEMBL
Match: A0A7J0F8B5 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_09g0008850 PE=3 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 1.8e-33
Identity = 71/141 (50.35%), Postives = 106/141 (75.18%), Query Frame = 0


Query: 10  DRLQQPAVIDVKLSYYDTRVSSWNSTVSMKLDVETSIIKSGVPTIFEDKLAIGSEFSREY 69
           +R Q+P  ID+KLSY DTR S+WN+ +S+KL V+TS +++G+P I E K+ I +EFS  Y
Sbjct: 295 NRSQEPNTIDMKLSYTDTRSSTWNANISLKLGVKTS-VQTGIPLIAEGKVEISAEFSGAY 354

Query: 70  EWGEAKNLTEKVDVVHRVLVQPLRKVKVNLVATQASYDVPFSYTQNDTLINGQNITLNME 129
           +WGE ++ T  ++ V++V V P+  VKV+L+AT+ S DVPFSY+Q DTLINGQ  T +M+
Sbjct: 355 QWGETQSSTTVMETVYKVTVPPMTMVKVSLLATKGSCDVPFSYSQRDTLINGQQTTHHMD 414

Query: 130 DGIYNGVNIYNFKFDQESSQL 151
           DG+Y G+N +NFK++ +  +L
Sbjct: 415 DGVYTGMNCFNFKYETKQEKL 434

[Close]

BLAST of Cla97C03G055650 vs. ExPASy TrEMBL
Match: A0A2R6R6R8 (Natterin-3 like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc10740 PE=3 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 3.1e-33
Identity = 72/141 (51.06%), Postives = 105/141 (74.47%), Query Frame = 0


Query: 10  DRLQQPAVIDVKLSYYDTRVSSWNSTVSMKLDVETSIIKSGVPTIFEDKLAIGSEFSREY 69
           +R Q+P  ID+KLSY DTR S+WN+ VS+KL V+TS  ++G+P I E K+ I +EFS  Y
Sbjct: 326 NRSQEPNTIDMKLSYTDTRSSTWNTNVSLKLGVKTS-FQTGIPLIAEGKVEISAEFSGAY 385

Query: 70  EWGEAKNLTEKVDVVHRVLVQPLRKVKVNLVATQASYDVPFSYTQNDTLINGQNITLNME 129
           +WGE ++ T  ++ V++V V P+  VKV+L+AT+ S DVPFSY+Q DTLINGQ  T +M+
Sbjct: 386 QWGETQSSTTVMETVYKVTVPPMTMVKVSLLATKGSCDVPFSYSQRDTLINGQQTTHHMD 445

Query: 130 DGIYNGVNIYNFKFDQESSQL 151
           DG+Y G+N +NFK++ +  +L
Sbjct: 446 DGVYTGMNCFNFKYETKQEKL 465

The following BLAST results are available for this feature:

BLAST of Cla97C03G055650 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140685.1	1.7e-49	74.82	uncharacterized protein LOC101213433 [Cucumis sativus] >KGN46323.1 hypothetical ...	[more]
KAA0039927.1	2.8e-44	67.35	uncharacterized protein E6C27_scaffold122G002070 [Cucumis melo var. makuwa] >TYK...	[more]
XP_008460024.1	4.8e-44	66.67	PREDICTED: uncharacterized protein LOC103498962 [Cucumis melo]	[more]
GFY94439.1	3.8e-33	50.35	hypothetical protein Acr_09g0008850 [Actinidia rufa]	[more]
XP_028088021.1	6.5e-33	51.45	uncharacterized protein LOC114288663 [Camellia sinensis]	[more]

BLAST of Cla97C03G055650 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q66S17	8.5e-04	30.17	Natterin-3 OS=Thalassophryne nattereri OX=289382 PE=1 SV=1	[more]

BLAST of Cla97C03G055650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KA14	8.2e-50	74.82	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G084570 PE=4 SV=1	[more]
A0A5D3DLV2	1.4e-44	67.35	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CB39	2.3e-44	66.67	uncharacterized protein LOC103498962 OS=Cucumis melo OX=3656 GN=LOC103498962 PE=...	[more]
A0A7J0F8B5	1.8e-33	50.35	Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_09g0008850 PE=3 SV=1	[more]
A0A2R6R6R8	3.1e-33	51.06	Natterin-3 like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc107...	[more]

BLAST of Cla97C03G055650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.170.15.10	Proaerolysin, chain A, domain 3	coord: 4..147 e-value: 8.8E-30 score: 105.5
None	No IPR available	PANTHER	PTHR39244	NATTERIN-4	coord: 8..149
None	No IPR available	CDD	cd20216	PFM_HFR-2-like	coord: 13..146 e-value: 2.9644E-60 score: 181.247
None	No IPR available	SUPERFAMILY	56973	Aerolisin/ETX pore-forming domain	coord: 26..146

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C03G055650.2	Cla97C03G055650.2	mRNA