Cla97C03G053420 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C03G053420
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	PsbP domain-containing protein 6
Location	Cla97Chr03: 2626760 .. 2630378 (+)
RNA-Seq Expression	Cla97C03G053420
Synteny	Cla97C03G053420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CGATTTCTTCTTCCTCCGAACTCTCTCAAATGGCGTCAGCTTCTGCATTTACAATTTCCCCATCATTCCCAACCTCAAGCTGCCACAAATCTAAGAGGAATCCTATTTCCTCAGTGATTTTCTGTCAAAAGGGTTCCCAATTCGGTCTCCGAAGGGAGATTTTGAAAGGATTCACTCTCCTTCCTCTTTCCCTCCCTCTTTTCGAACCCATAATTCCACTTCCTTCTGTATCCAAAGAGATCGAAGTTGGCTCATATCTCCCTCCCTCACAGTCTGACCCTTCTTTCGTGTTCTTCAAAGCTTCCCCCAGTGATACCCCGGCTCTTCGTGCAGGTATTATGACTTTTTTCTGTATTTTTCTTTATCATAATTCGGATGAATGTAGCTAAGTTGTATAGTTCTTTTGACTAGGAAAATTTTCATTTTAACAAATGGGGTTTACGTTTTATTGGTTGGAAACCTTTTTAGAATGTTGTTGTGTTTCCCTGATTGATTCTTTGGCTTGCCTTAAGTATTCAAAATTAGAATTATGTACCAAATGAGTTTGAGGTTTTTGTTATTTTGGTCGTGAGTCGTGAGAATCAAGTACTTTTTGGTTGGTTGTTTTGGATAACTGCTGAACTTAGTTGGAAAACTATATGCGAGTATTGGTTGCTGATCAGTTAACCTTCTATAATTGTGAGGTGGTACTGGATTTCATAAGAGGAAGAAGGATAGGAGAAAGCAAGAACAAAAGCAACAAAAGAAAGCCAAGTGGTAGAAGTGCATTGAAGAATGGAAACAATGTTTTACAAAATTTGCTATATTTGAAAAGGAACTGCCCAAAATAGATAAGTTTTATTATGTGTGAGACAGCTTTGAAAGTTTTTACTTTTTTCTTCCTAAGAAAAGGCTACAGTGAGTGCTTTGGTTGGATGTAACGGTAGGTTTCATTTAAAAAAATTTCTCCGACCAATTTGATTTTGCTAGCCCTAACAAACTTAGGATGGCACAAGAAGGAAATTATTTTTGGTAGATTATTTGTTGTCCATGTAGAAGTACAGAACGTTCTGATAAGGTACCGATTTTTTTAAGAAAAAAATTCATGAGAAACATTCAATCAAAATTTCATTGATGTATAAAATTACAAAAGGGCACCATGTGCTGTATTAAAGATTTCTATGATCCTGAATGATGCAGTACTAAAGATTGAGGATTCTTTGATATCGAATACCGTAGAGGCTGTGACATGGCTCATAGGAGTAAATTTGGAAAACATAAAATAACATCAAAAGTTCAAGATTGGAGTAGGTCCTAGCTTTGTTGCCAATCTCTTGGATCATTAAGAAATGATTGAAAATAATTTTGCAGGCTTCTCATTCTCCGTGGAAGAGTTCTTTCTAAGTTTTTGAAGTCTTCTCATCTCATCTATTGGCGCCAATGAGAAGTTTTCTCCATGTTGATCTTTCTAGACATGCCTTTTGATTAGTCTTTAGATGAATGTTGGACACTTGGAGATTATTGATTGTTCTTTGGTTTATATGAGAACTAAGGACTCAAAAGAGTACCAAACATCATTCGTTTCACTTTCTAAATTTCCTTGGGATTCTGGATAGCAGGCTGATTGTGAACTAGATATGCCAATTACCTGCTGCTGTGCCACCTAATCTTCAGTTTCATTGTGTAGGAAACTTGCCAATGCTAATAGGTTCTAGATTTTTACCATAGGTATGGCACAAATAGTTCAGATGACGGTAAGGAAGGATCAATGGAAAGTGATTGAAAATTGTGAGAGGTTGTCTCTAGTTTTTCTGTTATTTTTTTATTGTCAGAGATATTGCATCCAGTTATACGTTTTTGACCTGGGTTGTTATAGTCTCCATTTTTGCTTCTGAAAATTATGAAGTATATCCTATCTAGGACGGATGCACAAAGCTCATTATTAGTTATAATTTTCTTTCTTGTCACTCTCTTCTAAGTTGTTAAATGATTTATATGCTAATGGTACTTGAGATTTAGTTCTTTGCAGGAAATGTGCAACCATACCAGTTCGTTCTGCCCCCAACTTGGAAACAAACGCGTGTAGCAAACATTTTATCTGGTAATTACTGTCAACCCAAGTGTGCAGAGCCTTGGGTGGAGGTGAAATTTGAAGATGACAAACAAGGGAAAATCCAGGTTGTGGCTTCCCCTTTGATACGTCTGACTAATAAGCCTAATGCTACAATTGAAGACATAGGTAGTCCTGAGAAGGTAATTGCTTCTCTTGGCCCTTTTGTTACTGGAAGTACATACGATCCCGAAGAGCTCCTCGAATCATCAGTCGAGAAACTTGGTGATCAAACGGTATAATCCTCCTGTGTCTTTTAGATCATTTTTTTTCTTCTTATAATCTTTCTTATCCCTATGAGATTTGCTTATCCTCACTGCAGTAAATTGTTTTTTTTTTTTAAAGAAACTTATAGTTCAGTCCTAGATTCAATTTAGACTTTATTCTTTTAAAAGCTCATTTTCTTAGCCAGACCTTTTATTAAAACTTACCAAATGTACCTACCAGTCACCATTAGAAAGAAATAACAAAAATCCTATGTGATTAGTGTTTGTGGCTGAAGTAGCAGTTATTACCATACATTGTAACATCCATTAATAATTTTAGGGAAAACTACCTTCAGATCTCTAGGTTTTTTAATTTAGTTTCTAATTGGTCCCTAGGTTTTAAAATGTTTCACATTTAGTCCTTAGGTTTTAAGTTTGGTTTCAATTTAGTCTTTGTGTTTCAAAATGTTACAATTTTACCCAAGAGATCTAAATTTTGTTTCAAACCTCAATTTTTCACTAAATAATCACCTTCTATCTTTAGTGGTTCATGTCTATTAATTAGTTTAAGAAAATTATAATTAATTAAGTTTTACTATTTTTCATCATTATTAAAATTAAATCTAAATTTTTACCTCATAATTATTTTAAATTATTTAATAGACACTATTGCTAATATTGAGAGTGAGTATTTAATGAAAAATTCAGGTAAAAAGTGTAAATCTTGAAATTTAGGGACCAAATTGAAACAAAATTCAAATATCAAAAAACTGTAATATTTTGAAACCTAGGGATTTAATTGAAACCAAATTCAAAACTTAAGTACTAAAATTGTAACATTATGAAACCTAAAAATCAAATAAAAACTACACTGAAAACCTAGTGACTGAAAAGGTATTTTTCCTATAACTTTACTAAGTCGGATTTCTTCTACTCTATTATTAAACATAACATGGGATGATAATGAAACTTTGAAAAGCATAGAGACTAAGAAGTACTACAATTGTTAGAAGTTTAGAGCAGTTTCTCCTGAGATTAGATTTTGACTTACATGCTTAGTTCTTAGGTACATCCTCAATCTAGATCAAGTTCATTTCAACTCTACTTTGATGATGAATATTCATTAGAAGCTTGTTTTATCTTGTTTAAGCAGTATTACAAATACACACTGGAGACACCTTATGCTCTGACGGGTACGCACAATCTGGCTAAGGCAACAGCGAAAGGAAGCACCGTTGTGTTATTTGTGGCTAGTGCCAATGATAGACAATGGCAGACGTCTGAGAAAGTTTTGAGAACCATGCTTGATTCTTTTAAGCTGTAA

mRNA sequence

CGATTTCTTCTTCCTCCGAACTCTCTCAAATGGCGTCAGCTTCTGCATTTACAATTTCCCCATCATTCCCAACCTCAAGCTGCCACAAATCTAAGAGGAATCCTATTTCCTCAGTGATTTTCTGTCAAAAGGGTTCCCAATTCGGTCTCCGAAGGGAGATTTTGAAAGGATTCACTCTCCTTCCTCTTTCCCTCCCTCTTTTCGAACCCATAATTCCACTTCCTTCTGTATCCAAAGAGATCGAAGTTGGCTCATATCTCCCTCCCTCACAGTCTGACCCTTCTTTCGTGTTCTTCAAAGCTTCCCCCAGTGATACCCCGGCTCTTCGTGCAGGAAATGTGCAACCATACCAGTTCGTTCTGCCCCCAACTTGGAAACAAACGCGTGTAGCAAACATTTTATCTGGTAATTACTGTCAACCCAAGTGTGCAGAGCCTTGGGTGGAGGTGAAATTTGAAGATGACAAACAAGGGAAAATCCAGGTTGTGGCTTCCCCTTTGATACGTCTGACTAATAAGCCTAATGCTACAATTGAAGACATAGGTAGTCCTGAGAAGGTAATTGCTTCTCTTGGCCCTTTTGTTACTGGAAGTACATACGATCCCGAAGAGCTCCTCGAATCATCAGTCGAGAAACTTGGTGATCAAACGGTACATCCTCAATCTAGATCAAGTTCATTTCAACTCTACTTTGATGATGAATATTCATTAGAAGCTTGTTTTATCTTGTTTAAGCAGTATTACAAATACACACTGGAGACACCTTATGCTCTGACGGGTACGCACAATCTGGCTAAGGCAACAGCGAAAGGAAGCACCGTTGTGTTATTTGTGGCTAGTGCCAATGATAGACAATGGCAGACGTCTGAGAAAGTTTTGAGAACCATGCTTGATTCTTTTAAGCTGTAA

Coding sequence (CDS)

ATGGCGTCAGCTTCTGCATTTACAATTTCCCCATCATTCCCAACCTCAAGCTGCCACAAATCTAAGAGGAATCCTATTTCCTCAGTGATTTTCTGTCAAAAGGGTTCCCAATTCGGTCTCCGAAGGGAGATTTTGAAAGGATTCACTCTCCTTCCTCTTTCCCTCCCTCTTTTCGAACCCATAATTCCACTTCCTTCTGTATCCAAAGAGATCGAAGTTGGCTCATATCTCCCTCCCTCACAGTCTGACCCTTCTTTCGTGTTCTTCAAAGCTTCCCCCAGTGATACCCCGGCTCTTCGTGCAGGAAATGTGCAACCATACCAGTTCGTTCTGCCCCCAACTTGGAAACAAACGCGTGTAGCAAACATTTTATCTGGTAATTACTGTCAACCCAAGTGTGCAGAGCCTTGGGTGGAGGTGAAATTTGAAGATGACAAACAAGGGAAAATCCAGGTTGTGGCTTCCCCTTTGATACGTCTGACTAATAAGCCTAATGCTACAATTGAAGACATAGGTAGTCCTGAGAAGGTAATTGCTTCTCTTGGCCCTTTTGTTACTGGAAGTACATACGATCCCGAAGAGCTCCTCGAATCATCAGTCGAGAAACTTGGTGATCAAACGGTACATCCTCAATCTAGATCAAGTTCATTTCAACTCTACTTTGATGATGAATATTCATTAGAAGCTTGTTTTATCTTGTTTAAGCAGTATTACAAATACACACTGGAGACACCTTATGCTCTGACGGGTACGCACAATCTGGCTAAGGCAACAGCGAAAGGAAGCACCGTTGTGTTATTTGTGGCTAGTGCCAATGATAGACAATGGCAGACGTCTGAGAAAGTTTTGAGAACCATGCTTGATTCTTTTAAGCTGTAA

Protein sequence

MASASAFTISPSFPTSSCHKSKRNPISSVIFCQKGSQFGLRREILKGFTLLPLSLPLFEPIIPLPSVSKEIEVGSYLPPSQSDPSFVFFKASPSDTPALRAGNVQPYQFVLPPTWKQTRVANILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDIGSPEKVIASLGPFVTGSTYDPEELLESSVEKLGDQTVHPQSRSSSFQLYFDDEYSLEACFILFKQYYKYTLETPYALTGTHNLAKATAKGSTVVLFVASANDRQWQTSEKVLRTMLDSFKL

Homology

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BLAST of Cla97C03G053420 vs. NCBI nr
Match: XP_038895408.1 (psbP domain-containing protein 6, chloroplastic [Benincasa hispida])

HSP 1 Score: 464.9 bits (1195), Expect = 5.0e-127
Identity = 247/293 (84.30%), Postives = 252/293 (86.01%), Query Frame = 0


Query: 1   MASASAFTISPSFPTSSCHKSKRNPI-SSVIFCQKGSQFGLRREILKGFTLLPLSLPLFE 60
           MASASAFTISPSFPTSSCHK KR  + SS IFCQKGSQ  LRREILKGFTLLPLSLPL  
Sbjct: 39  MASASAFTISPSFPTSSCHKPKRKQMSSSAIFCQKGSQ--LRREILKGFTLLPLSLPLLN 98

Query: 61  PIIPLPSVSKEIEVGSYLPPSQSDPSFVFFKASPSDTPALRAGNVQPYQFVLPPTWKQTR 120
              PLPSVSKEIEVGSYLPPSQSDPSFVFFKASPSDTPALRAGNVQPYQF+LPPTWKQTR
Sbjct: 99  ---PLPSVSKEIEVGSYLPPSQSDPSFVFFKASPSDTPALRAGNVQPYQFILPPTWKQTR 158

Query: 121 VANILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDIGSPEKVIA 180
           VANILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDIGSPEKVIA
Sbjct: 159 VANILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDIGSPEKVIA 218

Query: 181 SLGPFVTGSTYDPEELLESSVEKLGDQTVHPQSRSSSFQLYFDDEYSLEACFILFKQYYK 240
           SLGPFVTGSTYDPEELLESSVEKLGDQT                             YYK
Sbjct: 219 SLGPFVTGSTYDPEELLESSVEKLGDQT-----------------------------YYK 278

Query: 241 YTLETPYALTGTHNLAKATAKGSTVVLFVASANDRQWQTSEKVLRTMLDSFKL 293
           YTLETPYALTGTHNLAKATAKGSTVVLFVASAND+QWQ+SEKVLRTMLDSF+L
Sbjct: 279 YTLETPYALTGTHNLAKATAKGSTVVLFVASANDKQWQSSEKVLRTMLDSFQL 297

[Close]

BLAST of Cla97C03G053420 vs. NCBI nr
Match: XP_008463519.1 (PREDICTED: psbP domain-containing protein 6, chloroplastic [Cucumis melo] >KAA0051923.1 psbP domain-containing protein 6 [Cucumis melo var. makuwa] >TYK12239.1 psbP domain-containing protein 6 [Cucumis melo var. makuwa])

HSP 1 Score: 463.4 bits (1191), Expect = 1.5e-126
Identity = 240/292 (82.19%), Postives = 249/292 (85.27%), Query Frame = 0


Query: 1   MASASAFTISPSFPTSSCHKSKRNPISSVIFCQKGSQFGLRREILKGFTLLPLSLPLFEP 60
           MAS SAFTISPSFP S+ HK K+ PISS IF QKGSQF  RREILKGFTLLPLS PLF+ 
Sbjct: 1   MASVSAFTISPSFPFSTSHKPKKKPISSSIFSQKGSQFVPRREILKGFTLLPLSFPLFQS 60

Query: 61  IIPLPSVSKEIEVGSYLPPSQSDPSFVFFKASPSDTPALRAGNVQPYQFVLPPTWKQTRV 120
           + PLPS+SKEIEVGSYLPPS SDPSFVFFKASPSDTPALRAGNVQPYQF+LPPTWKQTRV
Sbjct: 61  LNPLPSLSKEIEVGSYLPPSPSDPSFVFFKASPSDTPALRAGNVQPYQFILPPTWKQTRV 120

Query: 121 ANILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDIGSPEKVIAS 180
           ANILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDIGSPEKVIAS
Sbjct: 121 ANILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDIGSPEKVIAS 180

Query: 181 LGPFVTGSTYDPEELLESSVEKLGDQTVHPQSRSSSFQLYFDDEYSLEACFILFKQYYKY 240
           LGPFVTGSTYDP+ELLESSVEKLGDQT                             YYKY
Sbjct: 181 LGPFVTGSTYDPDELLESSVEKLGDQT-----------------------------YYKY 240

Query: 241 TLETPYALTGTHNLAKATAKGSTVVLFVASANDRQWQTSEKVLRTMLDSFKL 293
           TLETPYALTGTHNLAKATAKGSTVVLFVASAND+QWQ SEKVLRTMLDSF+L
Sbjct: 241 TLETPYALTGTHNLAKATAKGSTVVLFVASANDKQWQASEKVLRTMLDSFRL 263

[Close]

BLAST of Cla97C03G053420 vs. NCBI nr
Match: XP_022948517.1 (psbP domain-containing protein 6, chloroplastic [Cucurbita moschata] >KAG6607176.1 PsbP domain-containing protein 6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 462.2 bits (1188), Expect = 3.3e-126
Identity = 238/291 (81.79%), Postives = 247/291 (84.88%), Query Frame = 0


Query: 2   ASASAFTISPSFPTSSCHKSKRNPISSVIFCQKGSQFGLRREILKGFTLLPLSLPLFEPI 61
           ++ASAF ISPS PT+SC K KR PIS  IFCQ+GSQFG RREILKG TLLPLSLPLFE +
Sbjct: 3   SAASAFAISPSLPTASCRKPKRKPISPAIFCQRGSQFGHRREILKGLTLLPLSLPLFESV 62

Query: 62  IPLPSVSKEIEVGSYLPPSQSDPSFVFFKASPSDTPALRAGNVQPYQFVLPPTWKQTRVA 121
            PL S SKEIEVGSYLPPSQSDPSFVFFKASP DTPALRAGNVQPYQF+LPPTWKQTRVA
Sbjct: 63  HPLSSESKEIEVGSYLPPSQSDPSFVFFKASPRDTPALRAGNVQPYQFILPPTWKQTRVA 122

Query: 122 NILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDIGSPEKVIASL 181
           NILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDIGSPEKVIASL
Sbjct: 123 NILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDIGSPEKVIASL 182

Query: 182 GPFVTGSTYDPEELLESSVEKLGDQTVHPQSRSSSFQLYFDDEYSLEACFILFKQYYKYT 241
           GPFVTG+TYDPEELLESSVEKLGDQT                             YYKYT
Sbjct: 183 GPFVTGNTYDPEELLESSVEKLGDQT-----------------------------YYKYT 242

Query: 242 LETPYALTGTHNLAKATAKGSTVVLFVASANDRQWQTSEKVLRTMLDSFKL 293
           LETPYALTGTHNLAKATAKGSTVVLFVASAND+QWQ SEKVLRTMLDSF+L
Sbjct: 243 LETPYALTGTHNLAKATAKGSTVVLFVASANDKQWQASEKVLRTMLDSFQL 264

[Close]

BLAST of Cla97C03G053420 vs. NCBI nr
Match: XP_023521520.1 (psbP domain-containing protein 6, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 461.5 bits (1186), Expect = 5.6e-126
Identity = 237/291 (81.44%), Postives = 247/291 (84.88%), Query Frame = 0


Query: 2   ASASAFTISPSFPTSSCHKSKRNPISSVIFCQKGSQFGLRREILKGFTLLPLSLPLFEPI 61
           ++ASAF ISPS PT+SC K KR PIS  +FCQ+GSQF  RREILKG TLLPLSLPLFE +
Sbjct: 3   SAASAFAISPSLPTASCRKPKRKPISPAVFCQRGSQFVHRREILKGLTLLPLSLPLFESV 62

Query: 62  IPLPSVSKEIEVGSYLPPSQSDPSFVFFKASPSDTPALRAGNVQPYQFVLPPTWKQTRVA 121
            PLPS SKEIEVGSYLPPSQSDPSFVFFKASP DTPALRAGNVQPYQF+LPPTWKQTRVA
Sbjct: 63  HPLPSQSKEIEVGSYLPPSQSDPSFVFFKASPRDTPALRAGNVQPYQFILPPTWKQTRVA 122

Query: 122 NILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDIGSPEKVIASL 181
           NILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDIGSPEKVIASL
Sbjct: 123 NILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDIGSPEKVIASL 182

Query: 182 GPFVTGSTYDPEELLESSVEKLGDQTVHPQSRSSSFQLYFDDEYSLEACFILFKQYYKYT 241
           GPFVTG+TYDPEELLESSVEKLGDQT                             YYKYT
Sbjct: 183 GPFVTGNTYDPEELLESSVEKLGDQT-----------------------------YYKYT 242

Query: 242 LETPYALTGTHNLAKATAKGSTVVLFVASANDRQWQTSEKVLRTMLDSFKL 293
           LETPYALTGTHNLAKATAKGSTVVLFVASAND+QWQ SEKVLRTMLDSF+L
Sbjct: 243 LETPYALTGTHNLAKATAKGSTVVLFVASANDKQWQASEKVLRTMLDSFQL 264

[Close]

BLAST of Cla97C03G053420 vs. NCBI nr
Match: XP_022152863.1 (psbP domain-containing protein 6, chloroplastic [Momordica charantia])

HSP 1 Score: 461.1 bits (1185), Expect = 7.3e-126
Identity = 235/292 (80.48%), Postives = 248/292 (84.93%), Query Frame = 0


Query: 1   MASASAFTISPSFPTSSCHKSKRNPISSVIFCQKGSQFGLRREILKGFTLLPLSLPLFEP 60
           MASASAFT  PSFP+S+C K KR  IS  IFC++ SQFGLRREILKG +L PLSLPLFE 
Sbjct: 1   MASASAFTFPPSFPSSTCRKPKRKAISPAIFCRRSSQFGLRREILKGLSLFPLSLPLFES 60

Query: 61  IIPLPSVSKEIEVGSYLPPSQSDPSFVFFKASPSDTPALRAGNVQPYQFVLPPTWKQTRV 120
           IIPLPS SKE+EVGSYLPPSQSDPSFVFFKASPSDTPALRAGNVQPYQF+LPPTWKQTRV
Sbjct: 61  IIPLPSESKEVEVGSYLPPSQSDPSFVFFKASPSDTPALRAGNVQPYQFILPPTWKQTRV 120

Query: 121 ANILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDIGSPEKVIAS 180
           ANILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDIGSPEKVIAS
Sbjct: 121 ANILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDIGSPEKVIAS 180

Query: 181 LGPFVTGSTYDPEELLESSVEKLGDQTVHPQSRSSSFQLYFDDEYSLEACFILFKQYYKY 240
           LGPFVTG++YDPEELLE+SVEKLGDQT                             YYKY
Sbjct: 181 LGPFVTGNSYDPEELLEASVEKLGDQT-----------------------------YYKY 240

Query: 241 TLETPYALTGTHNLAKATAKGSTVVLFVASANDRQWQTSEKVLRTMLDSFKL 293
           TLETPYALTGTHNLAKATAKGSTVVLFVASAND+QW  SEK+LRTMLDSF+L
Sbjct: 241 TLETPYALTGTHNLAKATAKGSTVVLFVASANDKQWPASEKILRTMLDSFQL 263

[Close]

BLAST of Cla97C03G053420 vs. ExPASy Swiss-Prot
Match: Q9LXX5 (PsbP domain-containing protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPD6 PE=1 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 1.1e-89
Identity = 181/296 (61.15%), Postives = 212/296 (71.62%), Query Frame = 0


Query: 1   MASASAFTISPSF---PTSSCHKSKRNPISSVIFCQKGSQFGLRRE-ILKGFTLLPLSLP 60
           MA+AS    S  F   P SS     R+ +  V+   +  Q   RRE +LK    +P  L 
Sbjct: 1   MATASLVPTSKIFSVSPKSSASIKARSRV--VVASSQQQQQPRRRELLLKSAVAIPAILQ 60

Query: 61  LFEPIIPLPSVSKEIEVGSYLPPSQSDPSFVFFKASPSDTPALRAGNVQPYQFVLPPTWK 120
           L E  I   S ++E+EVGSYLP S SDPSFV FKA PSDTPALRAGNVQPYQFVLPP WK
Sbjct: 61  LKEAPI---SAAREVEVGSYLPLSPSDPSFVLFKAKPSDTPALRAGNVQPYQFVLPPNWK 120

Query: 121 QTRVANILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDIGSPEK 180
           Q R+ANILSGNYCQPKCAEPW+EVKFE++KQGK+QVVASPLIRLTNKPNATIED+G PEK
Sbjct: 121 QLRIANILSGNYCQPKCAEPWIEVKFENEKQGKVQVVASPLIRLTNKPNATIEDLGEPEK 180

Query: 181 VIASLGPFVTGSTYDPEELLESSVEKLGDQTVHPQSRSSSFQLYFDDEYSLEACFILFKQ 240
           VIASLGPFVTG++YD +ELL++S+EK+GDQT                             
Sbjct: 181 VIASLGPFVTGNSYDSDELLKTSIEKIGDQT----------------------------- 240

Query: 241 YYKYTLETPYALTGTHNLAKATAKGSTVVLFVASANDRQWQTSEKVLRTMLDSFKL 293
           YYKY LETP+ALTG+HNLAKATAKGSTVVLFV SA ++QWQ+S+K L  +LDSF+L
Sbjct: 241 YYKYVLETPFALTGSHNLAKATAKGSTVVLFVVSATEKQWQSSQKTLEAILDSFQL 262

[Close]

BLAST of Cla97C03G053420 vs. ExPASy TrEMBL
Match: A0A5A7U7M4 (PsbP domain-containing protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold769G00470 PE=4 SV=1)

HSP 1 Score: 463.4 bits (1191), Expect = 7.1e-127
Identity = 240/292 (82.19%), Postives = 249/292 (85.27%), Query Frame = 0


Query: 1   MASASAFTISPSFPTSSCHKSKRNPISSVIFCQKGSQFGLRREILKGFTLLPLSLPLFEP 60
           MAS SAFTISPSFP S+ HK K+ PISS IF QKGSQF  RREILKGFTLLPLS PLF+ 
Sbjct: 1   MASVSAFTISPSFPFSTSHKPKKKPISSSIFSQKGSQFVPRREILKGFTLLPLSFPLFQS 60

Query: 61  IIPLPSVSKEIEVGSYLPPSQSDPSFVFFKASPSDTPALRAGNVQPYQFVLPPTWKQTRV 120
           + PLPS+SKEIEVGSYLPPS SDPSFVFFKASPSDTPALRAGNVQPYQF+LPPTWKQTRV
Sbjct: 61  LNPLPSLSKEIEVGSYLPPSPSDPSFVFFKASPSDTPALRAGNVQPYQFILPPTWKQTRV 120

Query: 121 ANILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDIGSPEKVIAS 180
           ANILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDIGSPEKVIAS
Sbjct: 121 ANILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDIGSPEKVIAS 180

Query: 181 LGPFVTGSTYDPEELLESSVEKLGDQTVHPQSRSSSFQLYFDDEYSLEACFILFKQYYKY 240
           LGPFVTGSTYDP+ELLESSVEKLGDQT                             YYKY
Sbjct: 181 LGPFVTGSTYDPDELLESSVEKLGDQT-----------------------------YYKY 240

Query: 241 TLETPYALTGTHNLAKATAKGSTVVLFVASANDRQWQTSEKVLRTMLDSFKL 293
           TLETPYALTGTHNLAKATAKGSTVVLFVASAND+QWQ SEKVLRTMLDSF+L
Sbjct: 241 TLETPYALTGTHNLAKATAKGSTVVLFVASANDKQWQASEKVLRTMLDSFRL 263

[Close]

BLAST of Cla97C03G053420 vs. ExPASy TrEMBL
Match: A0A1S3CJG7 (psbP domain-containing protein 6, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501655 PE=4 SV=1)

HSP 1 Score: 463.4 bits (1191), Expect = 7.1e-127
Identity = 240/292 (82.19%), Postives = 249/292 (85.27%), Query Frame = 0


Query: 1   MASASAFTISPSFPTSSCHKSKRNPISSVIFCQKGSQFGLRREILKGFTLLPLSLPLFEP 60
           MAS SAFTISPSFP S+ HK K+ PISS IF QKGSQF  RREILKGFTLLPLS PLF+ 
Sbjct: 1   MASVSAFTISPSFPFSTSHKPKKKPISSSIFSQKGSQFVPRREILKGFTLLPLSFPLFQS 60

Query: 61  IIPLPSVSKEIEVGSYLPPSQSDPSFVFFKASPSDTPALRAGNVQPYQFVLPPTWKQTRV 120
           + PLPS+SKEIEVGSYLPPS SDPSFVFFKASPSDTPALRAGNVQPYQF+LPPTWKQTRV
Sbjct: 61  LNPLPSLSKEIEVGSYLPPSPSDPSFVFFKASPSDTPALRAGNVQPYQFILPPTWKQTRV 120

Query: 121 ANILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDIGSPEKVIAS 180
           ANILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDIGSPEKVIAS
Sbjct: 121 ANILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDIGSPEKVIAS 180

Query: 181 LGPFVTGSTYDPEELLESSVEKLGDQTVHPQSRSSSFQLYFDDEYSLEACFILFKQYYKY 240
           LGPFVTGSTYDP+ELLESSVEKLGDQT                             YYKY
Sbjct: 181 LGPFVTGSTYDPDELLESSVEKLGDQT-----------------------------YYKY 240

Query: 241 TLETPYALTGTHNLAKATAKGSTVVLFVASANDRQWQTSEKVLRTMLDSFKL 293
           TLETPYALTGTHNLAKATAKGSTVVLFVASAND+QWQ SEKVLRTMLDSF+L
Sbjct: 241 TLETPYALTGTHNLAKATAKGSTVVLFVASANDKQWQASEKVLRTMLDSFRL 263

[Close]

BLAST of Cla97C03G053420 vs. ExPASy TrEMBL
Match: A0A6J1G9G7 (psbP domain-containing protein 6, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111452175 PE=4 SV=1)

HSP 1 Score: 462.2 bits (1188), Expect = 1.6e-126
Identity = 238/291 (81.79%), Postives = 247/291 (84.88%), Query Frame = 0


Query: 2   ASASAFTISPSFPTSSCHKSKRNPISSVIFCQKGSQFGLRREILKGFTLLPLSLPLFEPI 61
           ++ASAF ISPS PT+SC K KR PIS  IFCQ+GSQFG RREILKG TLLPLSLPLFE +
Sbjct: 3   SAASAFAISPSLPTASCRKPKRKPISPAIFCQRGSQFGHRREILKGLTLLPLSLPLFESV 62

Query: 62  IPLPSVSKEIEVGSYLPPSQSDPSFVFFKASPSDTPALRAGNVQPYQFVLPPTWKQTRVA 121
            PL S SKEIEVGSYLPPSQSDPSFVFFKASP DTPALRAGNVQPYQF+LPPTWKQTRVA
Sbjct: 63  HPLSSESKEIEVGSYLPPSQSDPSFVFFKASPRDTPALRAGNVQPYQFILPPTWKQTRVA 122

Query: 122 NILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDIGSPEKVIASL 181
           NILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDIGSPEKVIASL
Sbjct: 123 NILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDIGSPEKVIASL 182

Query: 182 GPFVTGSTYDPEELLESSVEKLGDQTVHPQSRSSSFQLYFDDEYSLEACFILFKQYYKYT 241
           GPFVTG+TYDPEELLESSVEKLGDQT                             YYKYT
Sbjct: 183 GPFVTGNTYDPEELLESSVEKLGDQT-----------------------------YYKYT 242

Query: 242 LETPYALTGTHNLAKATAKGSTVVLFVASANDRQWQTSEKVLRTMLDSFKL 293
           LETPYALTGTHNLAKATAKGSTVVLFVASAND+QWQ SEKVLRTMLDSF+L
Sbjct: 243 LETPYALTGTHNLAKATAKGSTVVLFVASANDKQWQASEKVLRTMLDSFQL 264

[Close]

BLAST of Cla97C03G053420 vs. ExPASy TrEMBL
Match: A0A6J1DG13 (psbP domain-containing protein 6, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111020489 PE=4 SV=1)

HSP 1 Score: 461.1 bits (1185), Expect = 3.5e-126
Identity = 235/292 (80.48%), Postives = 248/292 (84.93%), Query Frame = 0


Query: 1   MASASAFTISPSFPTSSCHKSKRNPISSVIFCQKGSQFGLRREILKGFTLLPLSLPLFEP 60
           MASASAFT  PSFP+S+C K KR  IS  IFC++ SQFGLRREILKG +L PLSLPLFE 
Sbjct: 1   MASASAFTFPPSFPSSTCRKPKRKAISPAIFCRRSSQFGLRREILKGLSLFPLSLPLFES 60

Query: 61  IIPLPSVSKEIEVGSYLPPSQSDPSFVFFKASPSDTPALRAGNVQPYQFVLPPTWKQTRV 120
           IIPLPS SKE+EVGSYLPPSQSDPSFVFFKASPSDTPALRAGNVQPYQF+LPPTWKQTRV
Sbjct: 61  IIPLPSESKEVEVGSYLPPSQSDPSFVFFKASPSDTPALRAGNVQPYQFILPPTWKQTRV 120

Query: 121 ANILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDIGSPEKVIAS 180
           ANILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDIGSPEKVIAS
Sbjct: 121 ANILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDIGSPEKVIAS 180

Query: 181 LGPFVTGSTYDPEELLESSVEKLGDQTVHPQSRSSSFQLYFDDEYSLEACFILFKQYYKY 240
           LGPFVTG++YDPEELLE+SVEKLGDQT                             YYKY
Sbjct: 181 LGPFVTGNSYDPEELLEASVEKLGDQT-----------------------------YYKY 240

Query: 241 TLETPYALTGTHNLAKATAKGSTVVLFVASANDRQWQTSEKVLRTMLDSFKL 293
           TLETPYALTGTHNLAKATAKGSTVVLFVASAND+QW  SEK+LRTMLDSF+L
Sbjct: 241 TLETPYALTGTHNLAKATAKGSTVVLFVASANDKQWPASEKILRTMLDSFQL 263

[Close]

BLAST of Cla97C03G053420 vs. ExPASy TrEMBL
Match: A0A6J1KBG9 (psbP domain-containing protein 6, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111493415 PE=4 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 2.8e-123
Identity = 237/293 (80.89%), Postives = 245/293 (83.62%), Query Frame = 0


Query: 1   MAS-ASAFTISPSFPTSSCHKSKRNPISSVIFCQKGSQFGLRREILKGFTLLPLSLPLFE 60
           MAS ASA  ISPS PT+SC    R PI   IFCQ+GSQFG RREILKG TLLPLSLPLFE
Sbjct: 1   MASVASAIAISPSLPTASC----RKPIYPAIFCQRGSQFGHRREILKGLTLLPLSLPLFE 60

Query: 61  PIIPLPSVSKEIEVGSYLPPSQSDPSFVFFKASPSDTPALRAGNVQPYQFVLPPTWKQTR 120
            + P+PS SKEIEVGSYLPPSQSDPSFVFFKASP DTPALRAGNVQPYQF+LPPTWKQTR
Sbjct: 61  SVYPIPSESKEIEVGSYLPPSQSDPSFVFFKASPRDTPALRAGNVQPYQFILPPTWKQTR 120

Query: 121 VANILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDIGSPEKVIA 180
           VANILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDIGSPEKVIA
Sbjct: 121 VANILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDIGSPEKVIA 180

Query: 181 SLGPFVTGSTYDPEELLESSVEKLGDQTVHPQSRSSSFQLYFDDEYSLEACFILFKQYYK 240
           SLGPFVTG+TYDPEELLESSVEKLGDQT                             YYK
Sbjct: 181 SLGPFVTGNTYDPEELLESSVEKLGDQT-----------------------------YYK 240

Query: 241 YTLETPYALTGTHNLAKATAKGSTVVLFVASANDRQWQTSEKVLRTMLDSFKL 293
           YTLETPYALTGTHNLAKATAKGSTVVLFVASAND+QWQ SEKVLRTMLDSF+L
Sbjct: 241 YTLETPYALTGTHNLAKATAKGSTVVLFVASANDKQWQASEKVLRTMLDSFQL 260

[Close]

BLAST of Cla97C03G053420 vs. TAIR 10
Match: AT3G56650.1 (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein )

HSP 1 Score: 331.3 bits (848), Expect = 8.1e-91
Identity = 181/296 (61.15%), Postives = 212/296 (71.62%), Query Frame = 0


Query: 1   MASASAFTISPSF---PTSSCHKSKRNPISSVIFCQKGSQFGLRRE-ILKGFTLLPLSLP 60
           MA+AS    S  F   P SS     R+ +  V+   +  Q   RRE +LK    +P  L 
Sbjct: 1   MATASLVPTSKIFSVSPKSSASIKARSRV--VVASSQQQQQPRRRELLLKSAVAIPAILQ 60

Query: 61  LFEPIIPLPSVSKEIEVGSYLPPSQSDPSFVFFKASPSDTPALRAGNVQPYQFVLPPTWK 120
           L E  I   S ++E+EVGSYLP S SDPSFV FKA PSDTPALRAGNVQPYQFVLPP WK
Sbjct: 61  LKEAPI---SAAREVEVGSYLPLSPSDPSFVLFKAKPSDTPALRAGNVQPYQFVLPPNWK 120

Query: 121 QTRVANILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDIGSPEK 180
           Q R+ANILSGNYCQPKCAEPW+EVKFE++KQGK+QVVASPLIRLTNKPNATIED+G PEK
Sbjct: 121 QLRIANILSGNYCQPKCAEPWIEVKFENEKQGKVQVVASPLIRLTNKPNATIEDLGEPEK 180

Query: 181 VIASLGPFVTGSTYDPEELLESSVEKLGDQTVHPQSRSSSFQLYFDDEYSLEACFILFKQ 240
           VIASLGPFVTG++YD +ELL++S+EK+GDQT                             
Sbjct: 181 VIASLGPFVTGNSYDSDELLKTSIEKIGDQT----------------------------- 240

Query: 241 YYKYTLETPYALTGTHNLAKATAKGSTVVLFVASANDRQWQTSEKVLRTMLDSFKL 293
           YYKY LETP+ALTG+HNLAKATAKGSTVVLFV SA ++QWQ+S+K L  +LDSF+L
Sbjct: 241 YYKYVLETPFALTGSHNLAKATAKGSTVVLFVVSATEKQWQSSQKTLEAILDSFQL 262

The following BLAST results are available for this feature:

BLAST of Cla97C03G053420 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895408.1	5.0e-127	84.30	psbP domain-containing protein 6, chloroplastic [Benincasa hispida]	[more]
XP_008463519.1	1.5e-126	82.19	PREDICTED: psbP domain-containing protein 6, chloroplastic [Cucumis melo] >KAA00...	[more]
XP_022948517.1	3.3e-126	81.79	psbP domain-containing protein 6, chloroplastic [Cucurbita moschata] >KAG6607176...	[more]
XP_023521520.1	5.6e-126	81.44	psbP domain-containing protein 6, chloroplastic-like [Cucurbita pepo subsp. pepo...	[more]
XP_022152863.1	7.3e-126	80.48	psbP domain-containing protein 6, chloroplastic [Momordica charantia]	[more]

BLAST of Cla97C03G053420 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LXX5	1.1e-89	61.15	PsbP domain-containing protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Cla97C03G053420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U7M4	7.1e-127	82.19	PsbP domain-containing protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3CJG7	7.1e-127	82.19	psbP domain-containing protein 6, chloroplastic OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1G9G7	1.6e-126	81.79	psbP domain-containing protein 6, chloroplastic OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1DG13	3.5e-126	80.48	psbP domain-containing protein 6, chloroplastic OS=Momordica charantia OX=3673 G...	[more]
A0A6J1KBG9	2.8e-123	80.89	psbP domain-containing protein 6, chloroplastic OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Cla97C03G053420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G56650.1	8.1e-91	61.15	Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.1000.10	Mog1/PsbP, alpha/beta/alpha sandwich	coord: 82..292 e-value: 1.2E-27 score: 98.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR31407:SF18	PSBP DOMAIN-CONTAINING PROTEIN 6, CHLOROPLASTIC	coord: 236..291
None	No IPR available	PANTHER	PTHR31407:SF18	PSBP DOMAIN-CONTAINING PROTEIN 6, CHLOROPLASTIC	coord: 37..208
None	No IPR available	PANTHER	PTHR31407	FAMILY NOT NAMED	coord: 37..208
None	No IPR available	PANTHER	PTHR31407	FAMILY NOT NAMED	coord: 236..291
IPR002683	PsbP, C-terminal	PFAM	PF01789	PsbP	coord: 106..291 e-value: 2.0E-9 score: 37.7
IPR016123	Mog1/PsbP, alpha/beta/alpha sandwich	SUPERFAMILY	55724	Mog1p/PsbP-like	coord: 235..292
IPR016123	Mog1/PsbP, alpha/beta/alpha sandwich	SUPERFAMILY	55724	Mog1p/PsbP-like	coord: 102..208

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C03G053420.2	Cla97C03G053420.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0019898	extrinsic component of membrane
cellular_component	GO:0009654	photosystem II oxygen evolving complex
cellular_component	GO:0009523	photosystem II
molecular_function	GO:0005509	calcium ion binding