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Cla97C03G052460 (gene) Watermelon (97103) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGATTCCTGTTGGTAGGCGTCATTATTCTCGTCGTATTTTTATTCATCTTCCTTTTTCATTACTACCAATACCAACTTAGGCTGTACCAAACAAGAACCCTAGACATCGAGCAACGACTCCATGAAAATCATGCAGCACGACTCTTTGCTCGGCTTCAAGCCGAAATTATACGGCAACAGCAGGCAGCGCAACCAAACGCAGCGGAGCATGAAGAAACCTCCTCGGCTACCATGACGGTCGCTTACAAAGACGTGATCGAGACGTCGGACAAAGCCGATTGCTGTGCCATTTGCATTGAAGGGTTTGAGGAGGAAGAGATTTGTGGAGTTGTTGAGAGTTGTGCCCATTGTTTTCATAAGGATTGTATAGACCAATGGCTGAGGATTGAGAGACGTTGCCCATTGTGCCGCTGTATGGTTCATGTTGTATCTCAGAATAATAACTCCCAAGAAAATCAAGCTTAG ATGGGATTCCTGTTGGTAGGCGTCATTATTCTCGTCGTATTTTTATTCATCTTCCTTTTTCATTACTACCAATACCAACTTAGGCTGTACCAAACAAGAACCCTAGACATCGAGCAACGACTCCATGAAAATCATGCAGCACGACTCTTTGCTCGGCTTCAAGCCGAAATTATACGGCAACAGCAGGCAGCGCAACCAAACGCAGCGGAGCATGAAGAAACCTCCTCGGCTACCATGACGGTCGCTTACAAAGACGTGATCGAGACGTCGGACAAAGCCGATTGCTGTGCCATTTGCATTGAAGGGTTTGAGGAGGAAGAGATTTGTGGAGTTGTTGAGAGTTGTGCCCATTGTTTTCATAAGGATTGTATAGACCAATGGCTGAGGATTGAGAGACGTTGCCCATTGTGCCGCTGTATGGTTCATGTTGTATCTCAGAATAATAACTCCCAAGAAAATCAAGCTTAG ATGGGATTCCTGTTGGTAGGCGTCATTATTCTCGTCGTATTTTTATTCATCTTCCTTTTTCATTACTACCAATACCAACTTAGGCTGTACCAAACAAGAACCCTAGACATCGAGCAACGACTCCATGAAAATCATGCAGCACGACTCTTTGCTCGGCTTCAAGCCGAAATTATACGGCAACAGCAGGCAGCGCAACCAAACGCAGCGGAGCATGAAGAAACCTCCTCGGCTACCATGACGGTCGCTTACAAAGACGTGATCGAGACGTCGGACAAAGCCGATTGCTGTGCCATTTGCATTGAAGGGTTTGAGGAGGAAGAGATTTGTGGAGTTGTTGAGAGTTGTGCCCATTGTTTTCATAAGGATTGTATAGACCAATGGCTGAGGATTGAGAGACGTTGCCCATTGTGCCGCTGTATGGTTCATGTTGTATCTCAGAATAATAACTCCCAAGAAAATCAAGCTTAG MGFLLVGVIILVVFLFIFLFHYYQYQLRLYQTRTLDIEQRLHENHAARLFARLQAEIIRQQQAAQPNAAEHEETSSATMTVAYKDVIETSDKADCCAICIEGFEEEEICGVVESCAHCFHKDCIDQWLRIERRCPLCRCMVHVVSQNNNSQENQA Homology
BLAST of Cla97C03G052460 vs. NCBI nr
Match: KAA0067736.1 (RING-H2 finger protein ATL52-like [Cucumis melo var. makuwa]) HSP 1 Score: 176.8 bits (447), Expect = 1.5e-40 Identity = 98/149 (65.77%), Postives = 111/149 (74.50%), Query Frame = 0
BLAST of Cla97C03G052460 vs. NCBI nr
Match: TYJ97407.1 (RING-H2 finger protein ATL52-like [Cucumis melo var. makuwa]) HSP 1 Score: 174.5 bits (441), Expect = 7.2e-40 Identity = 97/149 (65.10%), Postives = 110/149 (73.83%), Query Frame = 0
BLAST of Cla97C03G052460 vs. NCBI nr
Match: XP_022970384.1 (RING-H2 finger protein ATL64-like [Cucurbita maxima]) HSP 1 Score: 168.3 bits (425), Expect = 5.2e-38 Identity = 93/157 (59.24%), Postives = 114/157 (72.61%), Query Frame = 0
BLAST of Cla97C03G052460 vs. NCBI nr
Match: KAG6583431.1 (RING-H2 finger protein ATL5, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 165.2 bits (417), Expect = 4.4e-37 Identity = 92/157 (58.60%), Postives = 111/157 (70.70%), Query Frame = 0
BLAST of Cla97C03G052460 vs. NCBI nr
Match: KAG7019192.1 (E3 ubiquitin-protein ligase ATL42, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 163.7 bits (413), Expect = 1.3e-36 Identity = 91/157 (57.96%), Postives = 110/157 (70.06%), Query Frame = 0
BLAST of Cla97C03G052460 vs. ExPASy Swiss-Prot
Match: Q9SRM0 (RING-H2 finger protein ATL66 OS=Arabidopsis thaliana OX=3702 GN=ATL66 PE=2 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 8.1e-10 Identity = 34/107 (31.78%), Postives = 55/107 (51.40%), Query Frame = 0
BLAST of Cla97C03G052460 vs. ExPASy Swiss-Prot
Match: P87237 (Uncharacterized RING finger protein C4G3.12c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCC4G3.12c PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 9.9e-08 Identity = 31/76 (40.79%), Postives = 41/76 (53.95%), Query Frame = 0
BLAST of Cla97C03G052460 vs. ExPASy Swiss-Prot
Match: Q9FL42 (Putative RING-H2 finger protein ATL69 OS=Arabidopsis thaliana OX=3702 GN=ATL69 PE=3 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 1.3e-07 Identity = 21/43 (48.84%), Postives = 27/43 (62.79%), Query Frame = 0
BLAST of Cla97C03G052460 vs. ExPASy Swiss-Prot
Match: Q9LSW9 (RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.7e-07 Identity = 22/54 (40.74%), Postives = 34/54 (62.96%), Query Frame = 0
BLAST of Cla97C03G052460 vs. ExPASy Swiss-Prot
Match: Q14B02 (E3 ubiquitin-protein ligase RNF133 OS=Mus musculus OX=10090 GN=Rnf133 PE=1 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 3.8e-07 Identity = 22/52 (42.31%), Postives = 32/52 (61.54%), Query Frame = 0
BLAST of Cla97C03G052460 vs. ExPASy TrEMBL
Match: A0A5A7VMH1 (RING-H2 finger protein ATL52-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold352G00560 PE=4 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 7.0e-41 Identity = 98/149 (65.77%), Postives = 111/149 (74.50%), Query Frame = 0
BLAST of Cla97C03G052460 vs. ExPASy TrEMBL
Match: A0A5D3BE50 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G002270 PE=3 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 3.5e-40 Identity = 97/149 (65.10%), Postives = 110/149 (73.83%), Query Frame = 0
BLAST of Cla97C03G052460 vs. ExPASy TrEMBL
Match: A0A6J1I5C3 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111469386 PE=3 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 2.5e-38 Identity = 93/157 (59.24%), Postives = 114/157 (72.61%), Query Frame = 0
BLAST of Cla97C03G052460 vs. ExPASy TrEMBL
Match: A0A6J1HJU0 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111464742 PE=3 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 1.5e-35 Identity = 92/157 (58.60%), Postives = 111/157 (70.70%), Query Frame = 0
BLAST of Cla97C03G052460 vs. ExPASy TrEMBL
Match: A0A1S4E1K2 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC107991538 PE=3 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 1.7e-26 Identity = 67/102 (65.69%), Postives = 75/102 (73.53%), Query Frame = 0
BLAST of Cla97C03G052460 vs. TAIR 10
Match: AT3G11110.1 (RING/U-box superfamily protein ) HSP 1 Score: 65.1 bits (157), Expect = 5.7e-11 Identity = 34/107 (31.78%), Postives = 55/107 (51.40%), Query Frame = 0
BLAST of Cla97C03G052460 vs. TAIR 10
Match: AT5G53110.1 (RING/U-box superfamily protein ) HSP 1 Score: 60.8 bits (146), Expect = 1.1e-09 Identity = 21/43 (48.84%), Postives = 29/43 (67.44%), Query Frame = 0
BLAST of Cla97C03G052460 vs. TAIR 10
Match: AT2G44581.1 (RING/U-box superfamily protein ) HSP 1 Score: 58.2 bits (139), Expect = 7.0e-09 Identity = 26/65 (40.00%), Postives = 33/65 (50.77%), Query Frame = 0
BLAST of Cla97C03G052460 vs. TAIR 10
Match: AT4G33565.1 (RING/U-box superfamily protein ) HSP 1 Score: 57.8 bits (138), Expect = 9.2e-09 Identity = 25/56 (44.64%), Postives = 33/56 (58.93%), Query Frame = 0
BLAST of Cla97C03G052460 vs. TAIR 10
Match: AT5G07040.1 (RING/U-box superfamily protein ) HSP 1 Score: 57.8 bits (138), Expect = 9.2e-09 Identity = 21/43 (48.84%), Postives = 27/43 (62.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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