Cla97C02G049080 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C02G049080
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	Unknown protein
Location	Cla97Chr02: 36578629 .. 36579137 (+)
RNA-Seq Expression	Cla97C02G049080
Synteny	Cla97C02G049080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATGACCTAAATTCCTCATCTCTCGCTTATTCTGTCCCTCGATCCACTGCCCATCGCCTTTCATCAAAAGAAAAAAGAAAAACCGCAAAAAAAAAATTCAATCTTGGCTCCGGTCAGTTTCATTTCGGTTCCCTGTTTTCATTGCCTTCATCCTTCAGTTTTGTTAATTATTCGAAAAATTCAAAGGTGACGGTCGCTTGATTTCGTTACTTCTGTAGATCCAAGGGAGCAAGATTCCGATCCGATCTACACAAGCGTATGTAATTGTATAACTATGAACATTTATGTTTTTCATGATCGAGATGTTCTGGTTCCGCTGCTTAGAATTGATGATTTTATTTTCTATCTTCTAGAGCATCTTTGTTTTCCAACGTAATCATCCTGAAAATATTCCGGCACTTGTTTTCTTAAAGGCTGGGGGCTCTTTCCTTTTTGCCTTCCTCGTCTGTCTATTCCTCAACTTGATGATGCAGGGAAAGGAAGGGGTTGATCGTAGTGAATTGTGA

mRNA sequence

ATGCATGACCTAAATTCCTCATCTCTCGCTTATTCTGTCCCTCGATCCACTGCCCATCGCCTTTCATCAAAAGAAAAAAGAAAAACCGCAAAAAAAAAATTCAATCTTGGCTCCGATCCAAGGGAGCAAGATTCCGATCCGATCTACACAAGCAGCATCTTTGTTTTCCAACGTAATCATCCTGAAAATATTCCGGCACTTGTTTTCTTAAAGGCTGGGGGCTCTTTCCTTTTTGCCTTCCTCGTCTGTCTATTCCTCAACTTGATGATGCAGGGAAAGGAAGGGGTTGATCGTAGTGAATTGTGA

Coding sequence (CDS)

ATGCATGACCTAAATTCCTCATCTCTCGCTTATTCTGTCCCTCGATCCACTGCCCATCGCCTTTCATCAAAAGAAAAAAGAAAAACCGCAAAAAAAAAATTCAATCTTGGCTCCGATCCAAGGGAGCAAGATTCCGATCCGATCTACACAAGCAGCATCTTTGTTTTCCAACGTAATCATCCTGAAAATATTCCGGCACTTGTTTTCTTAAAGGCTGGGGGCTCTTTCCTTTTTGCCTTCCTCGTCTGTCTATTCCTCAACTTGATGATGCAGGGAAAGGAAGGGGTTGATCGTAGTGAATTGTGA

Protein sequence

MHDLNSSSLAYSVPRSTAHRLSSKEKRKTAKKKFNLGSDPREQDSDPIYTSSIFVFQRNHPENIPALVFLKAGGSFLFAFLVCLFLNLMMQGKEGVDRSEL

Homology

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BLAST of Cla97C02G049080 vs. NCBI nr
Match: XP_004140204.2 (calcium-dependent mitochondrial ATP-magnesium/phosphate carrier protein 2 isoform X1 [Cucumis sativus])

HSP 1 Score: 73.2 bits (178), Expect = 1.5e-09
Identity = 40/49 (81.63%), Postives = 41/49 (83.67%), Query Frame = 0


Query: 1  MHDLNSSSLAYSVPRSTAHRLSSKEKRKTAKKKFNLGSDPREQDSDPIY 50
          MHDLNSS LAYSVPRS AHRLSSK  RKTA  K NLGSDPR QDSDPI+
Sbjct: 1  MHDLNSSPLAYSVPRSFAHRLSSKPNRKTA-NKINLGSDPRGQDSDPIF 48

The following BLAST results are available for this feature:

BLAST of Cla97C02G049080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140204.2	1.5e-09	81.63	calcium-dependent mitochondrial ATP-magnesium/phosphate carrier protein 2 isofor...	[more]

BLAST of Cla97C02G049080 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cla97C02G049080 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cla97C02G049080 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..46

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C02G049080.1	Cla97C02G049080.1	mRNA