Cla97C02G048850 (gene) Watermelon (97103) v2.5

Overview
NameCla97C02G048850
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionUnknown protein
LocationCla97Chr02: 36388879 .. 36391328 (-)
RNA-Seq ExpressionCla97C02G048850
SyntenyCla97C02G048850
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACAAACCCAACCTTAAGATTTTCATATACTTGAACTCAACTCAGACGAAACAGTATAGGGTGGGTTAGATTATCGGATTTTTCGGGTCTCAAATTTTTTTACCACCTTTATCCATGAGGTGTCAAAACGTACACTCTCGTCGCCTAGCTTGCAAAATGATTCTAAATGGTCATTGACTTAACTTTAAACTAACATAATGTTGATTGGACTATTAAATGTCTATATGAATCATGAATGAAGTGAGCGGCATTTTGTTGATTTAAAATTAAACTAGAAATTATTTAGAATCACTTTACAAATTTTGAGGGTTCAATAAAAAAAAAATTAATATTAAATAAATAACATTAACAACTTTAGGTTACTTGAAAAACCGGATAGGATAATGTATCTCTAGTTTCTTTTAAAAAATAGTTTTAAAATTATAGCTTGAAATTTAAAAACATTAAAACAGACAAATTTATAAATAAGAGGGAGTAGTATAAAAACTAAAGGTTATCAAATATACCTAAATAATAATCAAACGGATGCTAAGTGTTTTGTTTAGTAGGTTATTCAAATTTTGTAGTACTTATAAATATACTATTAAACAAGTTTTTTTAACTATTGTTTAAATTGAAATTTAGTTTATGGACTCACTATCAAATATATATCTCAAAATAGGTATGTAATTTTCTTTTTTTAAAGATCGTGAGATTTTTAATCGAGGTTGAAAATATCAATGTCGATGAAAATATCAAAGTTTTAATTTTACAAAAATTTTGATAGAAACATCGATTAAAATGTCGATTTCGACGGATATTTCTGAAAAAATTATTTTTTAAAAAAGAATAAAATAGTAAATAAATATTTTATATTTTAAAACAAGTTTATATGTCTATTATTTATATTATATTTACACTGGTGATATTTTGTTGCTTATTTTTCTATATTTCGTGATTTTTTTTACAATATAACAAAAATTTTGATTCACTTCTCTTGTCAATATTGAACCCATGAAAACATTAAGATATTGATGGAAATACCAACAAGTTAACGTAAATTTAATACAAGGTCTCAACTTTGATAGAAAAATATTTGAATGCATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAGAATATACTTGGATGCATCAACCCATCAAGTGTTATAATCATAAAGTTGTCATGTGACAAAATTTTAAATTTTAAAATATAAAAATTTCAAATCCCATTTTGTAACCATTTCGTTTTTTTGTTTTTGTTTTTGAAAATTAAGTCTATTAATATTACTTATGCCTTCAAATTTATTTATTTGTTATCTATTTTTTTACCAATGGTTTAAAAAACTAAGCTAAATTTTGAAAACTAAAACAACTTTTAAAAGCTTACTTTTGTTTTTGGATTTTGACAAAGAATTCAACTATTGTCAAGAGAGATGTAAATCAATATAATAAATGAGGAGGACATAAACTTAATTTTAAAAAACAAAAACAAAAAACTAAATAATTACCAAACGGGATCTTAATAATTTATTTTCTTTGTGATGAAATGATATACAAAGATAGGTGCATCAAAGGCTGCCACAAAACATTATTGTGCTTTCTCAGAAAAAAAAAAAGTCATAATGATTGAATTTTTGTTAGATATTTATTCAAATAAGGTTAAAATATCAATATCGAAGAACTTAATTTTAAGATGAAATTATAGATAAAATGTTAATTTCTACCAATATTTTTTTTAAATATTATAAAAATAAAAATTTAAATTAGTAAATAAACATTATATAATTTTATAGGATTAAATCGGTTAATAGTTCTGTTATTTATATTTTATTTTACATATTGATACTTATTTTTTGTTTTTCGTAAATTTTTTTATCATAAAAATATCGATTTATTCATCCAATGGAAACATAAAAGAAATTTAATGCTACGAAAAGAAAAGAGAGAATAAAAAATTAGAAACAAACTCTCTTCGCCTCCCCTCTTCCTGTTTTCACCTTCCCTCTCCTCCCGTTTATAGCCGCCAGTCATTCTTCTTCAGTCCGGCGATCCTCAAGCAATAGACCCACGCTACCCTCCGGCGCCAGAAGTCAACAGCGCGACTCCGACCAGAAACCGGCGCCGCACTTACACCATTGACGACAGTTTGCTCCTCGTCTACAGCAGCGACTTGTTGCAGCACACCAGACCCGCGGCGCTTGACGTCTTCTTAACCCTTGCAGACTTCGACGACGGCGCAAGACGGCGCAACATCCTCCAGCACCCAAACCACGAGCTCTACATTTGGAATTCTTCTGTTGATAGTTTCGGACTAATCGAACAAGATTTAACGGCGAAATTGGGGTAAGAACTAGTTGGCAACCCTCCTGATTATCTTGTGGTTAGGCTAACGACCTTGAGTTCAGTCAGCATCAGTTTTAGTTAATTTTCAAATCTAATTAGCAAACGTCTCTAGGTAG

mRNA sequence

ATGAACAAACCCAACCTTAAGATTTTCATATACTTGAACTCAACTCAGACGAAACAGTATAGGCCGCCAGTCATTCTTCTTCAGTCCGGCGATCCTCAAGCAATAGACCCACGCTACCCTCCGGCGCCAGAAGTCAACAGCGCGACTCCGACCAGAAACCGGCGCCGCACTTACACCATTGACGACAGTTTGCTCCTCGTCTACAGCAGCGACTTGTTGCAGCACACCAGACCCGCGGCGCTTGACGTCTTCTTAACCCTTGCAGACTTCGACGACGGCGCAAGACGGCGCAACATCCTCCAGCACCCAAACCACGAGCTCTACATTTGGAATTCTTCTGTTGATAGTTTCGGACTAATCGAACAAGATTTAACGGCGAAATTGGGGTAG

Coding sequence (CDS)

ATGAACAAACCCAACCTTAAGATTTTCATATACTTGAACTCAACTCAGACGAAACAGTATAGGCCGCCAGTCATTCTTCTTCAGTCCGGCGATCCTCAAGCAATAGACCCACGCTACCCTCCGGCGCCAGAAGTCAACAGCGCGACTCCGACCAGAAACCGGCGCCGCACTTACACCATTGACGACAGTTTGCTCCTCGTCTACAGCAGCGACTTGTTGCAGCACACCAGACCCGCGGCGCTTGACGTCTTCTTAACCCTTGCAGACTTCGACGACGGCGCAAGACGGCGCAACATCCTCCAGCACCCAAACCACGAGCTCTACATTTGGAATTCTTCTGTTGATAGTTTCGGACTAATCGAACAAGATTTAACGGCGAAATTGGGGTAG

Protein sequence

MNKPNLKIFIYLNSTQTKQYRPPVILLQSGDPQAIDPRYPPAPEVNSATPTRNRRRTYTIDDSLLLVYSSDLLQHTRPAALDVFLTLADFDDGARRRNILQHPNHELYIWNSSVDSFGLIEQDLTAKLG
Homology
[Close]
BLAST of Cla97C02G048850 vs. NCBI nr
Match: KAG6570426.1 (hypothetical protein SDJN03_29341, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 72.4 bits (176), Expect = 3.2e-09
Identity = 47/87 (54.02%), Postives = 49/87 (56.32%), Query Frame = 0 

Query: 30  GDPQAIDPRYPPAPEVNSATPTRNRRRTYTIDDSLLLVYSSDLLQHTRPAALDVFLTLAD 89
           GDP A DPRY  AP VNSATPTRNRR TYTI+     V SS   Q               
Sbjct: 53  GDPPATDPRYSLAPTVNSATPTRNRRLTYTIE----TVCSSSPSQTATHC---------- 112

Query: 90  FDDGARRRNILQHPNHE-LYIWNSSVD 116
               ARRRNILQH  HE L+IWNSS D
Sbjct: 113 ----ARRRNILQHRQHELLHIWNSSED 121

[Close]
BLAST of Cla97C02G048850 vs. ExPASy TrEMBL
Match: A0A0A0KI89 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G430640 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.8e-13
Identity = 56/110 (50.91%), Postives = 67/110 (60.91%), Query Frame = 0 

Query: 21  RPPVILLQSGDPQAIDPRYPPAPEVNSATPTRNRRRTYTIDDSLLLVYSSDLLQHTRPAA 80
           +PPV LLQ     +IDP YPP P V SATPT +R     +  +LL          +   A
Sbjct: 22  QPPVFLLQL-RRFSIDPPYPPPPAVISATPTSDR-----VSPTLLTTVCC-----SSTVA 81

Query: 81  LDVFLT-LADFDDGARRRNILQHPNHELYIWNSSVDSFGLIEQDLTAKLG 130
              + T L     GARRRNIL+H NHEL+I NSSVD+FGLI+QDLTAKLG
Sbjct: 82  TSCYSTPLQTETHGARRRNILRHRNHELHILNSSVDNFGLIQQDLTAKLG 120

The following BLAST results are available for this feature:
BLAST of Cla97C02G048850 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6570426.13.2e-0954.02hypothetical protein SDJN03_29341, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Cla97C02G048850 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cla97C02G048850 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KI891.8e-1350.91Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G430640 PE=4 SV=1[more]
BLAST of Cla97C02G048850 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 31..54

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C02G048850.2Cla97C02G048850.2mRNA