Cla97C02G047250 (gene) Watermelon (97103) v2.5

Overview
NameCla97C02G047250
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionUnknown protein
LocationCla97Chr02: 34951668 .. 34952031 (+)
RNA-Seq ExpressionCla97C02G047250
SyntenyCla97C02G047250
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACACCATTGCAGTTGGCATGAGCATCAGTGCATGGGGCGGACATATGTACAGTATATTTTTGTTTCTATGTGGAGATTGGATGGTAGAATGCGTTGTGGCTGTCACTATTTACCTGTTACTGACTGTTATGCTGATTATTCAAGGTTTTTTTTCCCTTTTGTTTCTGATTCATGGGATTTCCCTGATCCATCATACTTCATATTTAATTTATAAGAACAGCATTCTTGATTCTTATGTCAAAATTTCAACATATTCAAATAGCTGGACGTATTGGCATGGTTCCAGATTCGAAGACTGCTGCTACCTTTTGTAGTTCTCTGGGTAAAACTTTAGCGATAGCTGTGTTGTCATTTTGCTGA

mRNA sequence

ATGGACACCATTGCAGTTGGCATGAGCATCAGTGCATGGGGCGGACATATGTACAGTATATTTTTGTTTCTATGTGGAGATTGGATGGTAGAATGCGTTGTGGCTGTCACTATTTACCTGTTACTGACTGTTATGCTGATTATTCAAGCTGGACGTATTGGCATGGTTCCAGATTCGAAGACTGCTGCTACCTTTTGTAGTTCTCTGGGTAAAACTTTAGCGATAGCTGTGTTGTCATTTTGCTGA

Coding sequence (CDS)

ATGGACACCATTGCAGTTGGCATGAGCATCAGTGCATGGGGCGGACATATGTACAGTATATTTTTGTTTCTATGTGGAGATTGGATGGTAGAATGCGTTGTGGCTGTCACTATTTACCTGTTACTGACTGTTATGCTGATTATTCAAGCTGGACGTATTGGCATGGTTCCAGATTCGAAGACTGCTGCTACCTTTTGTAGTTCTCTGGGTAAAACTTTAGCGATAGCTGTGTTGTCATTTTGCTGA

Protein sequence

MDTIAVGMSISAWGGHMYSIFLFLCGDWMVECVVAVTIYLLLTVMLIIQAGRIGMVPDSKTAATFCSSLGKTLAIAVLSFC
Homology
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BLAST of Cla97C02G047250 vs. NCBI nr
Match: KAG6570786.1 (hypothetical protein SDJN03_29701, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 91.3 bits (225), Expect = 4.2e-15
Identity = 49/56 (87.50%), Postives = 51/56 (91.07%), Query Frame = 0 

Query: 1  MDTIAVGMSISAWGGHMYSIFLFLCGDWMVECVVAVTIYLLLTVMLIIQAGRIGMV 57
          MDTIAVGMSI A GGHMYSIFLFLCGDWMVECVVAVTIYLLLTVMLIIQ   +GM+
Sbjct: 3  MDTIAVGMSIGALGGHMYSIFLFLCGDWMVECVVAVTIYLLLTVMLIIQE-ELGML 57

The following BLAST results are available for this feature:
BLAST of Cla97C02G047250 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6570786.14.2e-1587.50hypothetical protein SDJN03_29701, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Cla97C02G047250 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cla97C02G047250 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cla97C02G047250 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C02G047250.1Cla97C02G047250.1mRNA