Cla97C02G046313 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C02G046313
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	histone H4
Location	Cla97Chr02: 34167761 .. 34171242 (+)
RNA-Seq Expression	Cla97C02G046313
Synteny	Cla97C02G046313

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTACTAATACACTCGTACGTTAAATGGGCTATACTCGATTTGGTCTAAGAGGTTAGGTATTTGTGCACCATCACTTCATAAATCACATATTTTTAATTTAAGAAAAACATTAACATAAACTTTCGTTAACTATAGAAACTTAATTTTAAAGTCTAAAGTTATATTTAAAAATTAAACAACATTAGGGAAGAGCGGTCAGCAATTTGAAATTAGACTTCTTAACACAATTTGGGCATTCCCGCTGCCCGGATTCAGGAATTTCACATTGCCCGGGAAAAAGAAAAATAAATATAAAAAAATTACACTTTTAAGGTGCAATCCCTAGAGAACTCACGCGGATCGAGCTTTTGAACCGTCGATCTTTCAAAGATCCAACGGAGAACAGAATTCTCAGCTAAACTCCAAAACCAGGCTTCGAATTGGCACTTCCATAAATAAGCCGGATCGGCACAATTCTAACATCGAAATCAAAACTCACAATCGATTATTCTACATCGCTGTTCATTCCTCAAAATCACCGGCGGCAATGTCTGGTCGTGGAAAGGGTGGCAAGGGACTGGGAAAGGGAGGAGCAAAGCGTCACAGGAAGGTTTTAAGAGATAACATTCAGGGCATTACCAAGCCTGCAATTCGCCGTTTGGCTCGTAGAGGTGGTGTGAAGCGTATCAGTGGGTTGATCTACGAAGAAACCAGAGGTGTTTTGAAGATTTTCCTCGAGAATGTGATTCGTGATGCTGTTACCTACACTGAGCATGCAAGGAGGAAGACGGTGACTGCCATGGATGTGGTCTATGCCTTGAAAAGGCAAGGGAGGACTTTGTACGGTTTCGGAGGTTAGGTTTAGGGTTTGGGTTTAATACGAAGAATGTTTGTAGACCATTACTTTTGATCTTACGATTCGTAGGCGAACTCGTTCTTTTGGTTTAATGGAAGTTAATTCCTCATTGGTTTCGAAGTGGTGGAATGTTAACTTCATTTAAGCGATGTGTTATAAGAATTTGGTTTTCTGCTCTTGTATCGACTTTTAACAAATATCTTCGAGCTTATGGTCTAACCGTCTACAATCTGACTTCAATGAGCTTGCTGTACATTTATGCCCATTTAATATAATTTTGAGCCTTGTTGAATCGTTAGGAGTTCGAACCATTAAACTTTCAGCATTGAAGTTAGAATTCTTTAGAAGCACTGGTTTGATTAGAACACCTAATTTCAATCACTATTCTCCATATGTGATTAACGTGATTTTCAACTTTTATCCTGAAATGTATAATTGCATTGACCTGTGCTATAATTGAGCCTATGAATTGATGTTTTATTGTCTCTTTTTGCGCTGTGATTTTGTTAGACGCATGGTTTGCTGAAAGATTATGTTTAGATTCAGAACCTTTGGTTATGAAATGGTTCAAAATTTCATACGAAATTTTTATGATTATCCTCTAGGTACTATCTAAATAGGTTTTGTGGGCTTGTTTTTGTTTCCCTAATAGAAAGCAATCGTTTCTATCAAAAAAGGAAAAGATAAATTCATATGAAATTTATGTTCCGTGCCCTGCGAACAATTAGGTCATTTGCTGATGGTAGGAATTTTAAGGGCTTGATTGAAGGTGCTTCCAAATAAATGCAAGTAACATTATATATATTTTTCTCTGCGCTGCTTGACTGGAAGTATGAGTGAACCCAATTTGCTGTTTCCATGAATCAAGCATATCTGGCTTTGATAATCCATGGGAGGAATTAATGCAAATTGGAGGCTGCTTGGATCAATGTTACCGGTCAACCTTTTAATTTCTGCAGTAGCTACTAATGCTTCAAATGGCAGGTTGGCCAAGAAGAGGCACTTCTATAGCCGTATCCTTTGCTCAATTCATAATAATTTTTAGGTGAGAATTCATATTGGGTTGCCCTTTACACCTCTTCCTGGGTGGCTTTCCGTTGGTTGATGTGCCTGATGATGATAATTTTCTGTAGCAGACTTCATTGCTGCTGATTTTGTCATGGAGCTTAGTATTTGAGGTCTCTTGATTGTTTCCGTTTCTCAACCTGATTAATCCATTGGCAAACTGTGCCTTACAAGGTAACATTCAGATTTGATACACTAAAAGAAGTCTATTTATTACTTTTACTTGCGTATGTGAGGAGAGTAGTTGAAGTTTGTACTTTCCAACTTGTTTCTCTTCTGTTTTACCTGAACTTGTACTCAATGTATATATCCCCTATCTGGGTGCCTTCTCATTTCTTTTCTGTTCTGTTTGTATGCTGTTTAACGCAATTAAATTCAGGAATGACGAATGCAACTTTTGCTTTTCTTTTATTTTCCAGATACCCTTTTAGTCTTTTAAATTCAGATGGATTGAGCTGAAATTGCATTTTTCTCACCTGATTACAACTGGATTTCATTCTTATGTTTTTTGATGTTTGTTTCCTTTGGTTTAAAGAATAATGAGTGTAAATTCTCCGTTCTGTTTATGGTTAACTGTACAGTCCCTATACGTATTGAATCACGAATGTCGAATGATGCTGATTTTGTTTCTTTTCCTATCTAGCTTTCTATGTATACTTTTGAAGACCTTGTTAGTATAGCTTCCTCTATAAGCAAGGGAAGAGGCCGAAGAAATCATGTTGGGCTTGCTATCAAAAGCTACCAATTACTGCGCTATGGGCCTTCGGGGGATTCATCCAACATTGTTCATACTCAATTCGACCATCACTCCCATCCCAAATCAAAGTGTCAAGTTTCGAACTAGTTCTGATTTCAGTCTCAAAACAGCATCTTGATGAAGTTCATACGCTCTCATTGGTAGCCGAGAACTCATAATGTAGACAGAAGAAGATTTAGAGTTTTGTACATGGCGTAGGAACCTCGAGGAGGGAAATGAAAATGATTTGCAGTTCGTTTATGTGCTTGAGCAAATTGTACGAGGAAATCAGAGCTGGAAGATTGGCTTTAACAACGCATGAATTTCAGGTAATTTAAAGCCCCATCACGTAGAAAAGGTTTTGATTTGAACTCTCGATGACTCTAGGTTGGCTTTGAGATTCTTCAATTTCTTGGGACTTCGTAGAAATTTCCATCACTCCACTGCGTCAGTCTTGTGTTTTAATTCATTCCCCCGTTCAGAATAGTTTGTTTTGGCCTGCATCTTCGCTTTTTCAAACCCTTTTGCTGCGTGGACTAACCCATTCGAGATTTTTTTGGATTTTTTTTGGAATTTTTAAGTACAAAATTTCACTTGATGACAATGCTTAAAGAAAACCACGTCGCAGACTTCTCACACCAGCAGTTGCAAAGAGTCTCTACACTGTAAATTAATAATATAAATTAATAAGTACCACATTGGTCATCCCATTATAACTGATGTGTACAAAGGTAAACGTTACACTTTTTTCCGCTGCAACCTTATTTCACTCTGTTTTCTGTTGGCAGAACTGGATCTATATTCTCTTTTCCCTTGACTTCTCGTTCCATCCAGAACGGTGA

mRNA sequence

ATGGTTACTAATACACTCAGAACTCACGCGGATCGAGCTTTTGAACCGTCGATCTTTCAAAGATCCAACGGAGAACAGAATTCTCAGCTAAACTCCAAAACCAGGCTTCGAATTGGCACTTCCATAAATAAGCCGGATCGGCACAATTCTAACATCGAAATCAAAACTCACAATCGATTATTCTACATCGCTGTTCATTCCTCAAAATCACCGGCGGCAATGTCTGGTCGTGGAAAGGGTGGCAAGGGACTGGGAAAGGGAGGAGCAAAGCGTCACAGGAAGGTTTTAAGAGATAACATTCAGGGCATTACCAAGCCTGCAATTCGCCGTTTGGCTCGTAGAGGTGGTGTGAAGCGTATCAGTGGGTTGATCTACGAAGAAACCAGAGGTGTTTTGAAGATTTTCCTCGAGAATGTGATTCGTGATGCTGTTACCTACACTGAGCATGCAAGGAGGAAGACGGTGACTGCCATGGATGTGGTCTATGCCTTGAAAAGGCAAGGGAGGACTTTGTACGGTTTCGGAGGAACCTCGAGGAGGGAAATGAAAATGATTTGCAGTTCGTTTATGTGCTTGAGCAAATTGTACGAGGAAATCAGAGCTGGAAGATTGGCTTTAACAACGCATGAATTTCAGAACTGGATCTATATTCTCTTTTCCCTTGACTTCTCGTTCCATCCAGAACGGTGA

Coding sequence (CDS)

ATGGTTACTAATACACTCAGAACTCACGCGGATCGAGCTTTTGAACCGTCGATCTTTCAAAGATCCAACGGAGAACAGAATTCTCAGCTAAACTCCAAAACCAGGCTTCGAATTGGCACTTCCATAAATAAGCCGGATCGGCACAATTCTAACATCGAAATCAAAACTCACAATCGATTATTCTACATCGCTGTTCATTCCTCAAAATCACCGGCGGCAATGTCTGGTCGTGGAAAGGGTGGCAAGGGACTGGGAAAGGGAGGAGCAAAGCGTCACAGGAAGGTTTTAAGAGATAACATTCAGGGCATTACCAAGCCTGCAATTCGCCGTTTGGCTCGTAGAGGTGGTGTGAAGCGTATCAGTGGGTTGATCTACGAAGAAACCAGAGGTGTTTTGAAGATTTTCCTCGAGAATGTGATTCGTGATGCTGTTACCTACACTGAGCATGCAAGGAGGAAGACGGTGACTGCCATGGATGTGGTCTATGCCTTGAAAAGGCAAGGGAGGACTTTGTACGGTTTCGGAGGAACCTCGAGGAGGGAAATGAAAATGATTTGCAGTTCGTTTATGTGCTTGAGCAAATTGTACGAGGAAATCAGAGCTGGAAGATTGGCTTTAACAACGCATGAATTTCAGAACTGGATCTATATTCTCTTTTCCCTTGACTTCTCGTTCCATCCAGAACGGTGA

Protein sequence

MVTNTLRTHADRAFEPSIFQRSNGEQNSQLNSKTRLRIGTSINKPDRHNSNIEIKTHNRLFYIAVHSSKSPAAMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGGTSRREMKMICSSFMCLSKLYEEIRAGRLALTTHEFQNWIYILFSLDFSFHPER

Homology

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BLAST of Cla97C02G046313 vs. NCBI nr
Match: RCV07805.1 (hypothetical protein SETIT_1G275000v2, partial [Setaria italica])

HSP 1 Score: 208.8 bits (530), Expect = 5.1e-50
Identity = 118/143 (82.52%), Postives = 120/143 (83.92%), Query Frame = 0


Query: 38  IGTSINKPDR---HNSNIEIKTHNRLFYIAVHSSKSPA-AMSGRGKGGKGLGKGGAKRHR 97
           I  + N P R   H    E  T + L   A  SS SPA AMSGRGKGGKGLGKGGAKRHR
Sbjct: 9   INRTPNPPVRRTSHRGEFESSTKSLL---AAESSSSPASAMSGRGKGGKGLGKGGAKRHR 68

Query: 98  KVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRK 157
           KVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRK
Sbjct: 69  KVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRK 128

Query: 158 TVTAMDVVYALKRQGRTLYGFGG 177
           TVTAMDVVYALKRQGRTLYGFGG
Sbjct: 129 TVTAMDVVYALKRQGRTLYGFGG 148

[Close]

BLAST of Cla97C02G046313 vs. NCBI nr
Match: XP_039623717.1 (uncharacterized protein zgc:163040 [Polypterus senegalus])

HSP 1 Score: 208.4 bits (529), Expect = 6.7e-50
Identity = 107/126 (84.92%), Postives = 115/126 (91.27%), Query Frame = 0


Query: 51  NIEIKTHNRLFYIAVHSSKSPAAMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRR 110
           N+E+  + RL  +A  S++    MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRR
Sbjct: 387 NLEVHINYRLGNMATASNEEKRKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRR 446

Query: 111 LARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 170
           LARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRT
Sbjct: 447 LARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRT 506

Query: 171 LYGFGG 177
           LYGFGG
Sbjct: 507 LYGFGG 512

[Close]

BLAST of Cla97C02G046313 vs. NCBI nr
Match: KQK05861.2 (hypothetical protein BRADI_2g22991v3 [Brachypodium distachyon])

HSP 1 Score: 208.0 bits (528), Expect = 8.7e-50
Identity = 108/110 (98.18%), Postives = 108/110 (98.18%), Query Frame = 0


Query: 67  SSKSPAAMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYE 126
           SS S AAMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYE
Sbjct: 81  SSSSEAAMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYE 140

Query: 127 ETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 177
           ETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 141 ETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 190

[Close]

BLAST of Cla97C02G046313 vs. NCBI nr
Match: XP_024311841.1 (uncharacterized protein LOC100841093 [Brachypodium distachyon])

HSP 1 Score: 208.0 bits (528), Expect = 8.7e-50
Identity = 105/114 (92.11%), Postives = 111/114 (97.37%), Query Frame = 0


Query: 74  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 133
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 134 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGGTSRREMKMICS 188
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGGT+++ + ++ S
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGGTTQKSLSVLVS 114

[Close]

BLAST of Cla97C02G046313 vs. NCBI nr
Match: XP_030382654.1 (uncharacterized protein LOC115630260 [Scaptodrosophila lebanonensis] >XP_030382655.1 uncharacterized protein LOC115630261 [Scaptodrosophila lebanonensis] >XP_030386813.1 uncharacterized protein LOC115633489 [Scaptodrosophila lebanonensis] >XP_030386814.1 uncharacterized protein LOC115633490 [Scaptodrosophila lebanonensis])

HSP 1 Score: 207.2 bits (526), Expect = 1.5e-49
Identity = 116/162 (71.60%), Postives = 131/162 (80.86%), Query Frame = 0


Query: 74  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 133
           M+GRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MTGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 134 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGGTSRREMKMICSSFMCLS 193
           +FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG S + M  I +SF  ++
Sbjct: 61  VFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGGISSKAMS-IMNSF--VN 120

Query: 194 KLYEEI--RAGRLA-------LTTHEFQNWIYILFSLDFSFH 227
            ++E I   A RLA       +T+ E Q  + +L   + + H
Sbjct: 121 DIFERIAAEASRLAHYNKRSTITSREIQTAVRLLLPGELAKH 159

[Close]

BLAST of Cla97C02G046313 vs. ExPASy Swiss-Prot
Match: P62785 (Histone H4 variant TH011 OS=Triticum aestivum OX=4565 PE=3 SV=2)

HSP 1 Score: 201.1 bits (510), Expect = 1.4e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 74  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 133
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 134 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 177
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]

BLAST of Cla97C02G046313 vs. ExPASy Swiss-Prot
Match: P59259 (Histone H4 OS=Arabidopsis thaliana OX=3702 GN=At1g07660 PE=1 SV=2)

HSP 1 Score: 201.1 bits (510), Expect = 1.4e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 74  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 133
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 134 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 177
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]

BLAST of Cla97C02G046313 vs. ExPASy Swiss-Prot
Match: Q6PMI5 (Histone H4 OS=Chelidonium majus OX=71251 PE=3 SV=3)

HSP 1 Score: 201.1 bits (510), Expect = 1.4e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 74  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 133
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 134 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 177
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]

BLAST of Cla97C02G046313 vs. ExPASy Swiss-Prot
Match: Q6WZ83 (Histone H4 OS=Eucalyptus globulus OX=34317 PE=3 SV=3)

HSP 1 Score: 201.1 bits (510), Expect = 1.4e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 74  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 133
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 134 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 177
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]

BLAST of Cla97C02G046313 vs. ExPASy Swiss-Prot
Match: Q6LAF3 (Histone H4 OS=Flaveria trinervia OX=4227 GN=hh4 PE=3 SV=3)

HSP 1 Score: 201.1 bits (510), Expect = 1.4e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 74  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 133
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 134 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 177
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]

BLAST of Cla97C02G046313 vs. ExPASy TrEMBL
Match: A0A287J3E0 (Histone H4 OS=Hordeum vulgare subsp. vulgare OX=112509 PE=3 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 3.8e-51
Identity = 110/120 (91.67%), Postives = 113/120 (94.17%), Query Frame = 0


Query: 60  LFYIAVHS---SKSPAAMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGG 119
           LF++  HS    +S AAMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGG
Sbjct: 10  LFFLITHSLGAERSEAAMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGG 69

Query: 120 VKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 177
           VKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 70  VKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 129

[Close]

BLAST of Cla97C02G046313 vs. ExPASy TrEMBL
Match: A0A453MZX7 (Histone H4 OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 6.5e-51
Identity = 108/122 (88.52%), Postives = 113/122 (92.62%), Query Frame = 0


Query: 55  KTHNRLFYIAVHSSKSPAAMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARR 114
           + H+R   I++  S  P+AMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARR
Sbjct: 2   RRHHRSSSISISVSSKPSAMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARR 61

Query: 115 GGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 174
           GGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGR LYGF
Sbjct: 62  GGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRALYGF 121

Query: 175 GG 177
           GG
Sbjct: 122 GG 123

[Close]

BLAST of Cla97C02G046313 vs. ExPASy TrEMBL
Match: A0A453CPZ9 (Histone H4 OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 2.5e-50
Identity = 112/141 (79.43%), Postives = 120/141 (85.11%), Query Frame = 0


Query: 42  INKPDRHNSNI------EIKTHNRLFYIAVHSSKSPAAMSGRGKGGKGLGKGGAKRHRKV 101
           IN+P    S I       +++  +L +  +  S+  AAMSGRGKGGKGLGKGGAKRHRKV
Sbjct: 16  INQPPALRSLIPSQASDSLQSRQQLLFFLITLSRRGAAMSGRGKGGKGLGKGGAKRHRKV 75

Query: 102 LRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTV 161
           LRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTV
Sbjct: 76  LRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTV 135

Query: 162 TAMDVVYALKRQGRTLYGFGG 177
           TAMDVVYALKRQGRTLYGFGG
Sbjct: 136 TAMDVVYALKRQGRTLYGFGG 156

[Close]

BLAST of Cla97C02G046313 vs. ExPASy TrEMBL
Match: A0A453CQ14 (Histone H4 OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 2.5e-50
Identity = 112/141 (79.43%), Postives = 120/141 (85.11%), Query Frame = 0


Query: 42  INKPDRHNSNI------EIKTHNRLFYIAVHSSKSPAAMSGRGKGGKGLGKGGAKRHRKV 101
           IN+P    S I       +++  +L +  +  S+  AAMSGRGKGGKGLGKGGAKRHRKV
Sbjct: 2   INQPPALRSLIPSQASDSLQSRQQLLFFLITLSRRGAAMSGRGKGGKGLGKGGAKRHRKV 61

Query: 102 LRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTV 161
           LRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTV
Sbjct: 62  LRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTV 121

Query: 162 TAMDVVYALKRQGRTLYGFGG 177
           TAMDVVYALKRQGRTLYGFGG
Sbjct: 122 TAMDVVYALKRQGRTLYGFGG 142

[Close]

BLAST of Cla97C02G046313 vs. ExPASy TrEMBL
Match: A0A368PPX9 (Histone H4 (Fragment) OS=Setaria italica OX=4555 GN=SETIT_1G275000v2 PE=3 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 2.5e-50
Identity = 118/143 (82.52%), Postives = 120/143 (83.92%), Query Frame = 0


Query: 38  IGTSINKPDR---HNSNIEIKTHNRLFYIAVHSSKSPA-AMSGRGKGGKGLGKGGAKRHR 97
           I  + N P R   H    E  T + L   A  SS SPA AMSGRGKGGKGLGKGGAKRHR
Sbjct: 9   INRTPNPPVRRTSHRGEFESSTKSLL---AAESSSSPASAMSGRGKGGKGLGKGGAKRHR 68

Query: 98  KVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRK 157
           KVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRK
Sbjct: 69  KVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRK 128

Query: 158 TVTAMDVVYALKRQGRTLYGFGG 177
           TVTAMDVVYALKRQGRTLYGFGG
Sbjct: 129 TVTAMDVVYALKRQGRTLYGFGG 148

[Close]

BLAST of Cla97C02G046313 vs. TAIR 10
Match: AT1G07660.1 (Histone superfamily protein )

HSP 1 Score: 201.1 bits (510), Expect = 9.9e-52
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 74  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 133
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 134 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 177
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]

BLAST of Cla97C02G046313 vs. TAIR 10
Match: AT1G07820.1 (Histone superfamily protein )

HSP 1 Score: 201.1 bits (510), Expect = 9.9e-52
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 74  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 133
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 134 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 177
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]

BLAST of Cla97C02G046313 vs. TAIR 10
Match: AT1G07820.2 (Histone superfamily protein )

HSP 1 Score: 201.1 bits (510), Expect = 9.9e-52
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 74  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 133
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 134 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 177
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]

BLAST of Cla97C02G046313 vs. TAIR 10
Match: AT2G28740.1 (histone H4 )

HSP 1 Score: 201.1 bits (510), Expect = 9.9e-52
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 74  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 133
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 134 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 177
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]

BLAST of Cla97C02G046313 vs. TAIR 10
Match: AT3G45930.1 (Histone superfamily protein )

HSP 1 Score: 201.1 bits (510), Expect = 9.9e-52
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 74  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 133
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 134 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 177
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

The following BLAST results are available for this feature:

BLAST of Cla97C02G046313 vs. NCBI nr


Match Name	E-value	Identity	Description
RCV07805.1	5.1e-50	82.52	hypothetical protein SETIT_1G275000v2, partial [Setaria italica]	[more]
XP_039623717.1	6.7e-50	84.92	uncharacterized protein zgc:163040 [Polypterus senegalus]	[more]
KQK05861.2	8.7e-50	98.18	hypothetical protein BRADI_2g22991v3 [Brachypodium distachyon]	[more]
XP_024311841.1	8.7e-50	92.11	uncharacterized protein LOC100841093 [Brachypodium distachyon]	[more]
XP_030382654.1	1.5e-49	71.60	uncharacterized protein LOC115630260 [Scaptodrosophila lebanonensis] >XP_0303826...	[more]

BLAST of Cla97C02G046313 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P62785	1.4e-50	100.00	Histone H4 variant TH011 OS=Triticum aestivum OX=4565 PE=3 SV=2	[more]
P59259	1.4e-50	100.00	Histone H4 OS=Arabidopsis thaliana OX=3702 GN=At1g07660 PE=1 SV=2	[more]
Q6PMI5	1.4e-50	100.00	Histone H4 OS=Chelidonium majus OX=71251 PE=3 SV=3	[more]
Q6WZ83	1.4e-50	100.00	Histone H4 OS=Eucalyptus globulus OX=34317 PE=3 SV=3	[more]
Q6LAF3	1.4e-50	100.00	Histone H4 OS=Flaveria trinervia OX=4227 GN=hh4 PE=3 SV=3	[more]

BLAST of Cla97C02G046313 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A287J3E0	3.8e-51	91.67	Histone H4 OS=Hordeum vulgare subsp. vulgare OX=112509 PE=3 SV=1	[more]
A0A453MZX7	6.5e-51	88.52	Histone H4 OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1	[more]
A0A453CPZ9	2.5e-50	79.43	Histone H4 OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1	[more]
A0A453CQ14	2.5e-50	79.43	Histone H4 OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1	[more]
A0A368PPX9	2.5e-50	82.52	Histone H4 (Fragment) OS=Setaria italica OX=4555 GN=SETIT_1G275000v2 PE=3 SV=1	[more]

BLAST of Cla97C02G046313 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07660.1	9.9e-52	100.00	Histone superfamily protein	[more]
AT1G07820.1	9.9e-52	100.00	Histone superfamily protein	[more]
AT1G07820.2	9.9e-52	100.00	Histone superfamily protein	[more]
AT2G28740.1	9.9e-52	100.00	histone H4	[more]
AT3G45930.1	9.9e-52	100.00	Histone superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001951	Histone H4	PRINTS	PR00623	HISTONEH4	coord: 78..89 score: 95.59 coord: 113..133 score: 93.56 coord: 135..149 score: 95.1 coord: 93..112 score: 93.38 coord: 150..162 score: 90.05 coord: 162..173 score: 97.79
IPR001951	Histone H4	SMART	SM00417	h44	coord: 89..163 e-value: 2.0E-29 score: 113.7
IPR001951	Histone H4	CDD	cd00076	H4	coord: 91..174 e-value: 2.01951E-47 score: 149.574
IPR035425	CENP-T/Histone H4, histone fold	PFAM	PF15511	CENP-T_C	coord: 112..169 e-value: 1.2E-7 score: 31.8
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 75..176 e-value: 6.6E-58 score: 195.1
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 76..175
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..92
None	No IPR available	PANTHER	PTHR10484:SF185	HISTONE H4	coord: 44..176
None	No IPR available	PANTHER	PTHR10484	HISTONE H4	coord: 44..176
IPR019809	Histone H4, conserved site	PROSITE	PS00047	HISTONE_H4	coord: 88..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C02G046313.1	Cla97C02G046313.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006352	DNA-templated transcription, initiation
cellular_component	GO:0005654	nucleoplasm
cellular_component	GO:0000786	nucleosome
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046982	protein heterodimerization activity