Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGATCACGGAAAACAGAACACAGAACGGCTCCGGCAGAAGAAGAAGAAGAATAAGATCTCACTCGAAGACTACCTCGATTTCTTCTCCTCTAACAAGCAAAATTTCCTCCCTGTCAATTCTCTCAATCAGGTCCTGATCTACATTCTTCTTTATTTTTCGTTCCTCACCAATTTCTCTCTGATGATCTTTTTGGATTTCCTTTGGAATTTCTTGCCTGTTGATTTTTCATTCCGTTGATTCTGTTTATCTCTGTGCGCAGATCATTCGCATGCACGGCTACATGAACATCAAAGGTCAGAAGGTGAGTTTGCCGAACCGATACCTAAGTTCAGTTTTCTTGGCTGAAATTTGAAAATTGGTCATTATAACCTGTCTATGTTTGAATCTCTTTTGCAATGTTCATCAGTTGGTTTTAGTTTGAATTCCTTACCTTGAAGAATTAGAGAGTATTTACTCTGATTGTTTGAAATTATTTATCGATTTTGTTCTATGATTGTGTCTTTATATGGATGAATAGAACTACTAAACTTCGAGGCATCCATTTTATTTTCTTTTTCTTTCGATGAACTAATTTAGCCTATATGACCGAGAAGAATCTGGAAAAGGAAATTAGAAAGCGTTGCTACTCAGAAGCAGAAGTAATTTGATGTTTTCTTACGCCTCGTCTAATTAAAAGCGATTAATCACATTCACACCCTCTCTCTCTTGCTTAGAATGTATTGACGGATGCCGTAAACACAATTGATCTGATCAATCTCTCTCGTTCCACACTCAACGAGAGCATCTCATCCTCCGCGTCCATTCTGCTTGAGGACGTAATTTCGGACCTCAAAAACCTCGACTGGCAAGAATGCTGTGTAACATCGGTTCTGACTTTCAGCTCCTGGAAGCAGAATAACTCCGATCGGAGTCCAGACCACCAGAAGCCGACTCGTGCTTCAAAGAAGCCAGGAAAGAAATTACGACTACTAATAGAATGTGATGGTGAAGAAATTGAGGCCATTAATGGAGTTTCCTCGTCTTCTGCCTCAAAGAAGTCGGGAGGTAAATTAGAACCCTAG
mRNA sequence
ATGGAGGATCACGGAAAACAGAACACAGAACGGCTCCGGCAGAAGAAGAAGAAGAATAAGATCTCACTCGAAGACTACCTCGATTTCTTCTCCTCTAACAAGCAAAATTTCCTCCCTGTCAATTCTCTCAATCAGATCATTCGCATGCACGGCTACATGAACATCAAAGGTCAGAAGAATGTATTGACGGATGCCGTAAACACAATTGATCTGATCAATCTCTCTCGTTCCACACTCAACGAGAGCATCTCATCCTCCGCGTCCATTCTGCTTGAGGACGTAATTTCGGACCTCAAAAACCTCGACTGGCAAGAATGCTGTGTAACATCGGTTCTGACTTTCAGCTCCTGGAAGCAGAATAACTCCGATCGGAGTCCAGACCACCAGAAGCCGACTCGTGCTTCAAAGAAGCCAGGAAAGAAATTACGACTACTAATAGAATGTGATGGTGAAGAAATTGAGGCCATTAATGGAGTTTCCTCGTCTTCTGCCTCAAAGAAGTCGGGAGGTAAATTAGAACCCTAG
Coding sequence (CDS)
ATGGAGGATCACGGAAAACAGAACACAGAACGGCTCCGGCAGAAGAAGAAGAAGAATAAGATCTCACTCGAAGACTACCTCGATTTCTTCTCCTCTAACAAGCAAAATTTCCTCCCTGTCAATTCTCTCAATCAGATCATTCGCATGCACGGCTACATGAACATCAAAGGTCAGAAGAATGTATTGACGGATGCCGTAAACACAATTGATCTGATCAATCTCTCTCGTTCCACACTCAACGAGAGCATCTCATCCTCCGCGTCCATTCTGCTTGAGGACGTAATTTCGGACCTCAAAAACCTCGACTGGCAAGAATGCTGTGTAACATCGGTTCTGACTTTCAGCTCCTGGAAGCAGAATAACTCCGATCGGAGTCCAGACCACCAGAAGCCGACTCGTGCTTCAAAGAAGCCAGGAAAGAAATTACGACTACTAATAGAATGTGATGGTGAAGAAATTGAGGCCATTAATGGAGTTTCCTCGTCTTCTGCCTCAAAGAAGTCGGGAGGTAAATTAGAACCCTAG
Protein sequence
MEDHGKQNTERLRQKKKKNKISLEDYLDFFSSNKQNFLPVNSLNQIIRMHGYMNIKGQKNVLTDAVNTIDLINLSRSTLNESISSSASILLEDVISDLKNLDWQECCVTSVLTFSSWKQNNSDRSPDHQKPTRASKKPGKKLRLLIECDGEEIEAINGVSSSSASKKSGGKLEP
Homology
BLAST of Cla97C02G043580 vs. NCBI nr
Match:
XP_038902525.1 (uncharacterized protein LOC120089183 [Benincasa hispida])
HSP 1 Score: 273.9 bits (699), Expect = 9.8e-70
Identity = 149/174 (85.63%), Postives = 156/174 (89.66%), Query Frame = 0
Query: 1 MEDHGKQNTERLRQKKKKNKISLEDYLDFFSSNKQNFLPVNSLNQIIRMHGYMNIKGQKN 60
M+DH KQNTERLR KKKKNKISLEDYLDFFSS KQNFL VN L+QIIRMHGYMNIKG KN
Sbjct: 1 MDDHPKQNTERLR-KKKKNKISLEDYLDFFSSKKQNFLAVNFLSQIIRMHGYMNIKGTKN 60
Query: 61 VLTDAVNTIDLINLSRSTLNESISSSASILLEDVISDLKNLDWQECCVTSVLTFSSWKQN 120
VLTDAVNTIDLINLSRSTL ESISSSA+I LE VISDL+NL+WQECCVTSVL F+SWKQN
Sbjct: 61 VLTDAVNTIDLINLSRSTLKESISSSATIPLEAVISDLENLEWQECCVTSVLNFNSWKQN 120
Query: 121 NSDRSPDHQKPTRASKKPGKKLRLLIECDGEEIEAINGVSSSSASKKSGGKLEP 175
NSD SPDHQKPT ASKKP KKLRL IEC GEEIEAI+GVSSSSASKK G LEP
Sbjct: 121 NSDPSPDHQKPTCASKKPEKKLRLPIECPGEEIEAIDGVSSSSASKKPGSILEP 173
BLAST of Cla97C02G043580 vs. NCBI nr
Match:
XP_023512485.1 (uncharacterized protein LOC111777222 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 243.8 bits (621), Expect = 1.1e-60
Identity = 132/171 (77.19%), Postives = 145/171 (84.80%), Query Frame = 0
Query: 1 MEDHGKQNTERLRQKKKKNKISLEDYLDFFSSNKQNFLPVNSLNQIIRMHGYMNIKGQKN 60
MEDH KQN ERLR KK NKISLEDYLDFFSS+KQ FLPV LNQIIRMHGYMNIKG KN
Sbjct: 1 MEDHRKQNAERLR--KKSNKISLEDYLDFFSSDKQLFLPVAYLNQIIRMHGYMNIKGLKN 60
Query: 61 VLTDAVNTIDLINLSRSTLNESISSSASILLEDVISDLKNLDWQECCVTSVLTFSSWKQN 120
V+ DAV TI+L+NLSRSTL ESISSSASI LEDVISDLKNL+WQEC VTSVL FSSW QN
Sbjct: 61 VVKDAVGTINLVNLSRSTLKESISSSASITLEDVISDLKNLEWQECSVTSVLNFSSWNQN 120
Query: 121 NSDRSPDHQKPTRASKKPGKKLRLLIECDGEEIEAINGVSSSSASKKSGGK 172
NSD SPD ++PT ASKK GKKLR+ EC +E+EA++GVSSS ASKKSG +
Sbjct: 121 NSDPSPDREEPTSASKKSGKKLRVSSECYSQEVEAVDGVSSSCASKKSGSE 169
BLAST of Cla97C02G043580 vs. NCBI nr
Match:
XP_022986041.1 (uncharacterized protein LOC111483895 [Cucurbita maxima])
HSP 1 Score: 242.3 bits (617), Expect = 3.2e-60
Identity = 132/171 (77.19%), Postives = 145/171 (84.80%), Query Frame = 0
Query: 1 MEDHGKQNTERLRQKKKKNKISLEDYLDFFSSNKQNFLPVNSLNQIIRMHGYMNIKGQKN 60
MED KQ ERLR KK NKISLEDYLDFFSS+KQ FLPV LNQIIRMHGYMNIKG KN
Sbjct: 1 MEDQRKQKAERLR--KKSNKISLEDYLDFFSSDKQLFLPVAYLNQIIRMHGYMNIKGLKN 60
Query: 61 VLTDAVNTIDLINLSRSTLNESISSSASILLEDVISDLKNLDWQECCVTSVLTFSSWKQN 120
V+ +AV TI+L+NLSRSTL ESISSSASI LEDVISDLKNL+WQEC VTSVL FSSWKQN
Sbjct: 61 VVKEAVGTINLVNLSRSTLKESISSSASITLEDVISDLKNLEWQECSVTSVLNFSSWKQN 120
Query: 121 NSDRSPDHQKPTRASKKPGKKLRLLIECDGEEIEAINGVSSSSASKKSGGK 172
NSD SPD Q+PT ASKK GKKLR+L EC+ +E+EAI+GVSSS ASKK G +
Sbjct: 121 NSDPSPDRQEPTSASKKSGKKLRVLSECNSQEVEAIDGVSSSCASKKPGSE 169
BLAST of Cla97C02G043580 vs. NCBI nr
Match:
XP_022944661.1 (uncharacterized protein LOC111449050 [Cucurbita moschata])
HSP 1 Score: 241.5 bits (615), Expect = 5.4e-60
Identity = 133/171 (77.78%), Postives = 144/171 (84.21%), Query Frame = 0
Query: 1 MEDHGKQNTERLRQKKKKNKISLEDYLDFFSSNKQNFLPVNSLNQIIRMHGYMNIKGQKN 60
MEDH KQN ERLR KK NKISLEDYLDFFSS+KQ FLPV LNQIIRMHGYMNIKG KN
Sbjct: 1 MEDHRKQNAERLR--KKSNKISLEDYLDFFSSDKQLFLPVAYLNQIIRMHGYMNIKGLKN 60
Query: 61 VLTDAVNTIDLINLSRSTLNESISSSASILLEDVISDLKNLDWQECCVTSVLTFSSWKQN 120
V+ DAV TI+L+NLSRSTL ESISSSASI LEDVISDLKNL+WQEC VTSVL FSSWKQN
Sbjct: 61 VVKDAVGTINLVNLSRSTLKESISSSASITLEDVISDLKNLEWQECSVTSVLNFSSWKQN 120
Query: 121 NSDRSPDHQKPTRASKKPGKKLRLLIECDGEEIEAINGVSSSSASKKSGGK 172
NSD SPD Q+PT ASKK GKKLR+L E +E+E I+GVSSS ASKK G +
Sbjct: 121 NSDTSPDRQEPTSASKKSGKKLRVLSERYSQEVEEIDGVSSSCASKKPGSE 169
BLAST of Cla97C02G043580 vs. NCBI nr
Match:
KAG6570533.1 (hypothetical protein SDJN03_29448, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 229.9 bits (585), Expect = 1.6e-56
Identity = 130/178 (73.03%), Postives = 143/178 (80.34%), Query Frame = 0
Query: 1 MEDHGKQNTERLRQKKKKNKISLEDYLDFFSSNKQNFLPVNSLNQIIRMHGYMNIKGQK- 60
MEDH KQN ERLR KK NKISLEDYLDFFSS+KQ FLPV LNQIIRMHGYMNIKG K
Sbjct: 1 MEDHRKQNAERLR--KKSNKISLEDYLDFFSSDKQLFLPVAYLNQIIRMHGYMNIKGLKV 60
Query: 61 ------NVLTDAVNTIDLINLSRSTLNESISSSASILLEDVISDLKNLDWQECCVTSVLT 120
NV+ +AV +I+L+NLSRSTL ESISSSASI LEDVISDLK L+WQEC VTSVL
Sbjct: 61 SLLNRCNVVKEAVGSINLVNLSRSTLKESISSSASITLEDVISDLKYLEWQECSVTSVLN 120
Query: 121 FSSWKQNNSDRSPDHQKPTRASKKPGKKLRLLIECDGEEIEAINGVSSSSASKKSGGK 172
FSSWKQNNSD SPD Q+PT ASKK KLR+L EC +E+EAI+GVSSS ASKK G +
Sbjct: 121 FSSWKQNNSDTSPDRQEPTSASKKSENKLRVLSECYSQEVEAIDGVSSSCASKKPGSE 176
BLAST of Cla97C02G043580 vs. ExPASy TrEMBL
Match:
A0A6J1J9Y9 (uncharacterized protein LOC111483895 OS=Cucurbita maxima OX=3661 GN=LOC111483895 PE=4 SV=1)
HSP 1 Score: 242.3 bits (617), Expect = 1.5e-60
Identity = 132/171 (77.19%), Postives = 145/171 (84.80%), Query Frame = 0
Query: 1 MEDHGKQNTERLRQKKKKNKISLEDYLDFFSSNKQNFLPVNSLNQIIRMHGYMNIKGQKN 60
MED KQ ERLR KK NKISLEDYLDFFSS+KQ FLPV LNQIIRMHGYMNIKG KN
Sbjct: 1 MEDQRKQKAERLR--KKSNKISLEDYLDFFSSDKQLFLPVAYLNQIIRMHGYMNIKGLKN 60
Query: 61 VLTDAVNTIDLINLSRSTLNESISSSASILLEDVISDLKNLDWQECCVTSVLTFSSWKQN 120
V+ +AV TI+L+NLSRSTL ESISSSASI LEDVISDLKNL+WQEC VTSVL FSSWKQN
Sbjct: 61 VVKEAVGTINLVNLSRSTLKESISSSASITLEDVISDLKNLEWQECSVTSVLNFSSWKQN 120
Query: 121 NSDRSPDHQKPTRASKKPGKKLRLLIECDGEEIEAINGVSSSSASKKSGGK 172
NSD SPD Q+PT ASKK GKKLR+L EC+ +E+EAI+GVSSS ASKK G +
Sbjct: 121 NSDPSPDRQEPTSASKKSGKKLRVLSECNSQEVEAIDGVSSSCASKKPGSE 169
BLAST of Cla97C02G043580 vs. ExPASy TrEMBL
Match:
A0A6J1FV08 (uncharacterized protein LOC111449050 OS=Cucurbita moschata OX=3662 GN=LOC111449050 PE=4 SV=1)
HSP 1 Score: 241.5 bits (615), Expect = 2.6e-60
Identity = 133/171 (77.78%), Postives = 144/171 (84.21%), Query Frame = 0
Query: 1 MEDHGKQNTERLRQKKKKNKISLEDYLDFFSSNKQNFLPVNSLNQIIRMHGYMNIKGQKN 60
MEDH KQN ERLR KK NKISLEDYLDFFSS+KQ FLPV LNQIIRMHGYMNIKG KN
Sbjct: 1 MEDHRKQNAERLR--KKSNKISLEDYLDFFSSDKQLFLPVAYLNQIIRMHGYMNIKGLKN 60
Query: 61 VLTDAVNTIDLINLSRSTLNESISSSASILLEDVISDLKNLDWQECCVTSVLTFSSWKQN 120
V+ DAV TI+L+NLSRSTL ESISSSASI LEDVISDLKNL+WQEC VTSVL FSSWKQN
Sbjct: 61 VVKDAVGTINLVNLSRSTLKESISSSASITLEDVISDLKNLEWQECSVTSVLNFSSWKQN 120
Query: 121 NSDRSPDHQKPTRASKKPGKKLRLLIECDGEEIEAINGVSSSSASKKSGGK 172
NSD SPD Q+PT ASKK GKKLR+L E +E+E I+GVSSS ASKK G +
Sbjct: 121 NSDTSPDRQEPTSASKKSGKKLRVLSERYSQEVEEIDGVSSSCASKKPGSE 169
BLAST of Cla97C02G043580 vs. ExPASy TrEMBL
Match:
A0A6J1D6A0 (uncharacterized protein LOC111018022 OS=Momordica charantia OX=3673 GN=LOC111018022 PE=4 SV=1)
HSP 1 Score: 186.0 bits (471), Expect = 1.3e-43
Identity = 106/157 (67.52%), Postives = 120/157 (76.43%), Query Frame = 0
Query: 18 KNKISLEDYLDFFSSNKQNFLPVNSLNQIIRMHGYMNIKGQKNVLTDAVNTIDLINLSRS 77
K+KISLEDYLDFFSSN Q L VN L QII+MHGY I QK+VL +AV+ IDLIN SRS
Sbjct: 6 KSKISLEDYLDFFSSNNQLLLTVNYLTQIIKMHGYRKINAQKSVLREAVSAIDLINPSRS 65
Query: 78 TLNESISSSASILLEDVISDLKNLDWQECCVTSVLTFSSWKQNNSDRSPDHQKPTRASKK 137
TL ES+SSSASI LEDVISDLK+LDW ECC TSV+TFSS QN+S SPDHQ+PT ASKK
Sbjct: 66 TLEESVSSSASIPLEDVISDLKDLDWLECCATSVVTFSSRSQNSSSPSPDHQEPTCASKK 125
Query: 138 PGKKLRLLIECDGEEIEAINGVSSSSASKKSGGKLEP 175
P +KLR L+E + A +GVSSS ASK KL P
Sbjct: 126 PERKLRRLVERLDQTEAANDGVSSSCASKDLERKLGP 162
BLAST of Cla97C02G043580 vs. ExPASy TrEMBL
Match:
A0A7N2MCL3 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)
HSP 1 Score: 126.7 bits (317), Expect = 9.4e-26
Identity = 84/168 (50.00%), Postives = 107/168 (63.69%), Query Frame = 0
Query: 11 RLRQKKKKNKISLEDYLDFFSSNKQNFLPVNSLNQIIRMHGYMNI-KGQKNVLTDAVNTI 70
R + K + K+SLE+Y+DF SNKQ L VN LNQII MHG+ I K QK VLTDAVNT+
Sbjct: 10 RSKVKTRTEKVSLENYIDFVLSNKQIDLTVNFLNQIINMHGFKKIHKVQKKVLTDAVNTL 69
Query: 71 DLINLSRSTLNESISSSASILLEDVISDLKNLDWQECCVTSVLTFSSWKQNN--SDRSPD 130
DL++ SRSTLN+++S A + LEDVI DL +L+WQECCVTS+ T SWK S +PD
Sbjct: 70 DLVDPSRSTLNDNVSCFAFVTLEDVILDLCDLNWQECCVTSIQTLDSWKHCGVVSGGAPD 129
Query: 131 HQKPTRASKKPGKKLRLLIECDGEEIEAINGVSSSSASKKSG-GKLEP 175
KP +AS G + + DG + G S ++SG GKL P
Sbjct: 130 PIKP-KASDPIG--VADVFGGDGSTSSCVVGSEYSGLERRSGVGKLVP 174
BLAST of Cla97C02G043580 vs. ExPASy TrEMBL
Match:
A0A2I4DKW1 (uncharacterized protein LOC108981160 OS=Juglans regia OX=51240 GN=LOC108981160 PE=4 SV=2)
HSP 1 Score: 120.6 bits (301), Expect = 6.7e-24
Identity = 66/126 (52.38%), Postives = 91/126 (72.22%), Query Frame = 0
Query: 15 KKKKNKISLEDYLDFFSSNKQNFLPVNSLNQIIRMHGYMNI-KGQKNVLTDAVNTIDLIN 74
++K+ K++LE+Y+DFF S+KQ L + SLNQ+I MHG I + K V+TDAVNT+DL++
Sbjct: 4 RRKQKKMTLENYVDFFLSHKQLRLTIQSLNQVIDMHGLRKIYRAPKKVVTDAVNTLDLMD 63
Query: 75 LSRSTLNESISSSASILLEDVISDLKNLDWQECCVTSVLTFSSWKQNNSDRSPDHQKPTR 134
SR TLN+++SS A + LEDVI+DL LDWQECCVTS+ T +SWK + D S Q P +
Sbjct: 64 PSRCTLNDNVSSLAFVALEDVIADLNELDWQECCVTSIQTLNSWKHSVPD-SGTKQIPIK 123
Query: 135 ASKKPG 140
S + G
Sbjct: 124 DSDRGG 128
BLAST of Cla97C02G043580 vs. TAIR 10
Match:
AT1G06320.1 (unknown protein; Has 24 Blast hits to 24 proteins in 10 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )
HSP 1 Score: 86.7 bits (213), Expect = 2.1e-17
Identity = 50/128 (39.06%), Postives = 82/128 (64.06%), Query Frame = 0
Query: 18 KNKISLEDYLDFFSSNKQNFLPVNSLNQIIRMHGYMNI-KGQKNVLTDAVNTIDLINLSR 77
+ KI++E+Y++F +S + LNQI+ +HG+ + K QK ++ +AV+++DL++LSR
Sbjct: 6 EKKITVEEYVEFCNSGNSIHFTIAYLNQILHLHGFRKLHKLQKKIVEEAVDSLDLLDLSR 65
Query: 78 STL---NESISSSASILLEDVISDLKNLDWQECCVTSVLTFSSWKQNNSDRSPDHQKPTR 137
STL +S SS+S+ L++VISD++ L WQECC TS+ +S + S+ S QK +
Sbjct: 66 STLKQVTDSSPSSSSLTLDEVISDIEALKWQECCFTSLQIINSQETTPSEISKPKQKSNK 125
Query: 138 ASKKPGKK 142
K KK
Sbjct: 126 RKKATMKK 133
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038902525.1 | 9.8e-70 | 85.63 | uncharacterized protein LOC120089183 [Benincasa hispida] | [more] |
XP_023512485.1 | 1.1e-60 | 77.19 | uncharacterized protein LOC111777222 [Cucurbita pepo subsp. pepo] | [more] |
XP_022986041.1 | 3.2e-60 | 77.19 | uncharacterized protein LOC111483895 [Cucurbita maxima] | [more] |
XP_022944661.1 | 5.4e-60 | 77.78 | uncharacterized protein LOC111449050 [Cucurbita moschata] | [more] |
KAG6570533.1 | 1.6e-56 | 73.03 | hypothetical protein SDJN03_29448, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1J9Y9 | 1.5e-60 | 77.19 | uncharacterized protein LOC111483895 OS=Cucurbita maxima OX=3661 GN=LOC111483895... | [more] |
A0A6J1FV08 | 2.6e-60 | 77.78 | uncharacterized protein LOC111449050 OS=Cucurbita moschata OX=3662 GN=LOC1114490... | [more] |
A0A6J1D6A0 | 1.3e-43 | 67.52 | uncharacterized protein LOC111018022 OS=Momordica charantia OX=3673 GN=LOC111018... | [more] |
A0A7N2MCL3 | 9.4e-26 | 50.00 | Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1 | [more] |
A0A2I4DKW1 | 6.7e-24 | 52.38 | uncharacterized protein LOC108981160 OS=Juglans regia OX=51240 GN=LOC108981160 P... | [more] |
Match Name | E-value | Identity | Description | |
AT1G06320.1 | 2.1e-17 | 39.06 | unknown protein; Has 24 Blast hits to 24 proteins in 10 species: Archae - 0; Bac... | [more] |