Cla97C02G040950 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C02G040950
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	Pre-mRNA-splicing factor 38
Location	Cla97Chr02: 28810320 .. 28813891 (+)
RNA-Seq Expression	Cla97C02G040950
Synteny	Cla97C02G040950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAATCGTACGGACCCAGCTGCCAAAAGCATACGGGGAACGAACCCGCAGAATCTGGTGGAGAAGATTCTTCGTTCAAAGATCTACCAGAATACTTACTGGAAGGAACAATGTTTTGGGTTGACGGCGGAGACACTGGTTGATAAAGCCATGGAGCTCGACCACCTCGGCGGTACATATGGTGGCAACCGCAAACCCACGCCGTTCATGTGTCTTGTTATGAAGATGCTCCAGATTCAGCCGGAGAAGGAAATTGTAATCGAGTTCATCAAGAACGAAGACTACAAGTAATTGTTATTTTCATTTTACTTTTCATTAAACAGAACTCTGGATTTTGGTTACCTAGAAGCGGTCAGGAGTAGGGTTAATTGGAAGGAATGTTTGAATTGTTTGTTTGATGGAGTTTAAAGAACTTACTGCGAAACTTATGAAAGCTAAATACTTGGTAGTCGGAGAGTTTTTGCAGTTGATCAGTGAATCGGAAATTAAGATAGTGAATGAGTTCAGAATTTATTTATGGGCGGTTTTTTTGTTAATTGTGATTTGATAGGCATAAGAAATGGATGAATGGTCAGGCTTATGGCTGAGCTAACTGAAGTATATTGGAAATGTGTTCTGTATCTCGTGGTTTTTTTATGGTTCATAAGGTTGTTGCTCACTCGCCTTAGCTTGAGATGATTGTTATGGTTTTATACTGTATGGTCTCGAAAATCCGTTGTCTGCTTGGATCTAAATCTTTTGTCTGTCAGTTAATAACCACGTTGTCATAGTGAAAACTCTCTCTCTTAATTTCCTGAGATTGGTATGAATGTTTTCTAGCCTCTCTCAAGCATACTTTTTGAAGTCACATTTTTTCTTTCGAGACATAGATATGTTCGGGTTCTTGGTGCCTTTTACTTGCGTCTAACTGGGACTGATGTTGACGTGTATCGTTACCTGGAACCTTTGTACAACGACTATCGGAAATTGAGGAGAAAATTAGCTGATGGATGTAAGCTTCTGGGCCTCTTTTTTGAATTTTATCTAATTAGTTTTTGTGAAAACTGTTGATTTTACGTTATTGTTGCAATAATGTATTTCTAGTTATGATCTCCTCTCTAAAAAGAAGGTTTGAACTCGATCTTATTTTTATTAGGTTTTTCTTTATCACACGTGGATGAAGTCATTGATGAACTTCTTACTAAAGATTATTCATGTGACATAGCTCTGCCACGTATCAAAAAGAGGTATGGTACTGATTACTCATTTGGCTATTTTCCAGTCAATTTATTTTTCAAGCGGAAGTTGATAATGTATTATCAAAATCAGGGCATTAGGAGAAATATACATTATCATTGTTTGACAAACAGTAGTACATGGATCAGAAGTTTTAAGTCTTGCTGTTCTGTTCTCTCTCTCTCTCTTTTAAATGTCTCTAGTGTTCAGTTTTGAATGCGATGCTTCTTTTGAGGTAACCTAAATAGGATACACTTTGTGATGGCAGATGGACCCTTGAATCTTCTGGTTCATTGCCTGCAAGGAAAAGTGCTTTAGAAGATGACTTTGAGGAGGAGGAAGAAAAGGAGGAGGTTGAGCCAATTAATGATTCTTTAGAAGATGATATTCATGAGAAGGTCTAAACACATTTCTGTTTGTATGCAAAAGCATCTAGTTTGCATTTTATTATTCTTGCTAACCCATTTGATAATCTTACATCTGCAGAATTATTATCGAGGGAGAAGTCCTGTGCGGGAGAGAGACAGAGACAGAAGGCGTGATAGTCACAGACACAGGTCCGATCTCCTGTCTTCTGTTTTTGTCTTTTCTTCTCCCTCCCTCATCTCTCATTTTTTATGGATGCAATGCAACTGTGATGCTCTTTCTGAATTTGTGAATGTTTCCTCCTGTGGAGGGTGGCATTAATTGATATCTCTAGTCTATTAGCTGCCTTCATTTTGTATCACATTTTTTGGGTTGAATGTGAATAATAATGTCCAAGGCCAAAATCAACAATTTTGAACACAAAATTTTTGTTTTACTTGAGTCCTTTTGTGGCAAATGCAATTCTCTTAGTGTTGGTGTTGGCGATAGTTGAAAAATTAGATCGAACAAGATTAGGAGATGAATAGGAGAATGGAAGCTGTGGCGTGGCATGAAGTTATCAGCTCGGTCTGGAAATTCATGCTCTTGCCTATCTTGGGATTGGGTTTAGTTGCTTCTAACTTCTAAGATCTTTGCCCTTTTGAGCACCATGTGTAGGTCAAGCTGAGTGCTAACTTGGTTGGTTTTTGACCATGCTACTGCTGTGAGTGTTGCGTTGATTTTGGTGTTTGACAATGTGCTTTCTGTGAGAATAAATATATTTTTTTTGTTGTTCCTTCCATTTATACAGAATGGTAAAGGGGGCCCTCTACGATCATAGAAATTAATAGAAAGGGATATTTGAATCCTTACCAACTTGATCTTGTTGCCCCAACATGATACCATTTAAATAAAATGAATCCTGATTTGATCTGGCTCTTTTAAACTGATTTTGATGCATTCTGGGAAAAATTCAGTTGTGTTTTGTTTTGTCTTTGTGTTTTTGTTTATTTTTAAATTATGTAGCTGGAAGCAGTTGGAATCTGTTATTCTTGGATTGCTATCCATACTGGTCAATTAACATTCGCATGTTTCTGTCACAACCATGGTATTTCAAACCAGTGGTTGCTTGCTGCTTCCTACAATAAATTCTCAAGATCCTGCCAGGTTTCTCTGTACTGACAGTGTGCAGCTGAGAAGTATGATGGATCGTACATATATTTGTCATAGTGATCTCATTTTCTCAATTTTACTTTTCTATAACATTGAAAGATTATCTTGGCGACTACAGCTGAGAACTACTCATTTGCTTTTCCTTTTATCTTTCTTGGTGAAAAAAGCTAATTTGATTCTTTTTCTGGGCGCCATTGAGTTTATATTTGGTTTACTTCCCATATGTTTATGATGCGTTACTTAGATGCATATGAGCTGTCTTATTACATCGTTCCATTGGGTAATATTGATCTATCGACACACTGCATTTTCTTTTGTTTAATCACAGGGACCGAGATTATGATAGAGACCGGGACTATGACAGAGACTATGATAGAGATCGGGGACGTGGAAGGGAAAGAGATAGAGATCGAGAAAGGGATCGGGATCGGGATCGAGACAGGGACAGAGATCGGGACAGGGACAGAGACAGAGATAGGGATAGGGACAGGGATCGCTATCGCCTAAGGGATGAGAAGGAACATGGCAGAGATCGAGATAGGGAAAGAGAAGGTAGGGAGAGGGAGAGACGAGACAGAGATCGTGATCGTGGTAGGAGAAGGAGCCATTCAAGGAGCCGAAGTAGGAGTAAAGATCGGGAGGATGGGGAGTACCGAAAGAGACACACCCGTAGCAGCACTAGTCCTAGAAGAAGGGATGGAGCGGAGGATAGAGAGGAGCCGAAGAAGAAGAAAGAAAAGAAGGAGAAAAAGGAAGCTGGGGCAGGTGAGGAAGATCCCGAGATTGCCGAATGGAATAGGATTCGTGCTTCTCTTGGATTGGCACCTCTCAAGTAG

mRNA sequence

ATGGCTAATCGTACGGACCCAGCTGCCAAAAGCATACGGGGAACGAACCCGCAGAATCTGGTGGAGAAGATTCTTCGTTCAAAGATCTACCAGAATACTTACTGGAAGGAACAATGTTTTGGGTTGACGGCGGAGACACTGGTTGATAAAGCCATGGAGCTCGACCACCTCGGCGGTACATATGGTGGCAACCGCAAACCCACGCCGTTCATGTGTCTTGTTATGAAGATGCTCCAGATTCAGCCGGAGAAGGAAATTGTAATCGAGTTCATCAAGAACGAAGACTACAAATATGTTCGGGTTCTTGGTGCCTTTTACTTGCGTCTAACTGGGACTGATGTTGACGTGTATCGTTACCTGGAACCTTTGTACAACGACTATCGGAAATTGAGGAGAAAATTAGCTGATGGATGTTTTTCTTTATCACACGTGGATGAAGTCATTGATGAACTTCTTACTAAAGATTATTCATGTGACATAGCTCTGCCACGTATCAAAAAGAGATGGACCCTTGAATCTTCTGGTTCATTGCCTGCAAGGAAAAGTGCTTTAGAAGATGACTTTGAGGAGGAGGAAGAAAAGGAGGAGGTTGAGCCAATTAATGATTCTTTAGAAGATGATATTCATGAGAAGAATTATTATCGAGGGAGAAGTCCTGTGCGGGAGAGAGACAGAGACAGAAGGCGTGATAGTCACAGACACAGGGACCGAGATTATGATAGAGACCGGGACTATGACAGAGACTATGATAGAGATCGGGGACGTGGAAGGGAAAGAGATAGAGATCGAGAAAGGGATCGGGATCGGGATCGAGACAGGGACAGAGATCGGGACAGGGACAGAGACAGAGATAGGGATAGGGACAGGGATCGCTATCGCCTAAGGGATGAGAAGGAACATGGCAGAGATCGAGATAGGGAAAGAGAAGGTAGGGAGAGGGAGAGACGAGACAGAGATCGTGATCGTGGTAGGAGAAGGAGCCATTCAAGGAGCCGAAGTAGGAGTAAAGATCGGGAGGATGGGGAGTACCGAAAGAGACACACCCGTAGCAGCACTAGTCCTAGAAGAAGGGATGGAGCGGAGGATAGAGAGGAGCCGAAGAAGAAGAAAGAAAAGAAGGAGAAAAAGGAAGCTGGGGCAGGTGAGGAAGATCCCGAGATTGCCGAATGGAATAGGATTCGTGCTTCTCTTGGATTGGCACCTCTCAAGTAG

Coding sequence (CDS)

ATGGCTAATCGTACGGACCCAGCTGCCAAAAGCATACGGGGAACGAACCCGCAGAATCTGGTGGAGAAGATTCTTCGTTCAAAGATCTACCAGAATACTTACTGGAAGGAACAATGTTTTGGGTTGACGGCGGAGACACTGGTTGATAAAGCCATGGAGCTCGACCACCTCGGCGGTACATATGGTGGCAACCGCAAACCCACGCCGTTCATGTGTCTTGTTATGAAGATGCTCCAGATTCAGCCGGAGAAGGAAATTGTAATCGAGTTCATCAAGAACGAAGACTACAAATATGTTCGGGTTCTTGGTGCCTTTTACTTGCGTCTAACTGGGACTGATGTTGACGTGTATCGTTACCTGGAACCTTTGTACAACGACTATCGGAAATTGAGGAGAAAATTAGCTGATGGATGTTTTTCTTTATCACACGTGGATGAAGTCATTGATGAACTTCTTACTAAAGATTATTCATGTGACATAGCTCTGCCACGTATCAAAAAGAGATGGACCCTTGAATCTTCTGGTTCATTGCCTGCAAGGAAAAGTGCTTTAGAAGATGACTTTGAGGAGGAGGAAGAAAAGGAGGAGGTTGAGCCAATTAATGATTCTTTAGAAGATGATATTCATGAGAAGAATTATTATCGAGGGAGAAGTCCTGTGCGGGAGAGAGACAGAGACAGAAGGCGTGATAGTCACAGACACAGGGACCGAGATTATGATAGAGACCGGGACTATGACAGAGACTATGATAGAGATCGGGGACGTGGAAGGGAAAGAGATAGAGATCGAGAAAGGGATCGGGATCGGGATCGAGACAGGGACAGAGATCGGGACAGGGACAGAGACAGAGATAGGGATAGGGACAGGGATCGCTATCGCCTAAGGGATGAGAAGGAACATGGCAGAGATCGAGATAGGGAAAGAGAAGGTAGGGAGAGGGAGAGACGAGACAGAGATCGTGATCGTGGTAGGAGAAGGAGCCATTCAAGGAGCCGAAGTAGGAGTAAAGATCGGGAGGATGGGGAGTACCGAAAGAGACACACCCGTAGCAGCACTAGTCCTAGAAGAAGGGATGGAGCGGAGGATAGAGAGGAGCCGAAGAAGAAGAAAGAAAAGAAGGAGAAAAAGGAAGCTGGGGCAGGTGAGGAAGATCCCGAGATTGCCGAATGGAATAGGATTCGTGCTTCTCTTGGATTGGCACCTCTCAAGTAG

Protein sequence

MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGTYGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYLEPLYNDYRKLRRKLADGCFSLSHVDEVIDELLTKDYSCDIALPRIKKRWTLESSGSLPARKSALEDDFEEEEEKEEVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYDRDRDYDRDYDRDRGRGRERDRDRERDRDRDRDRDRDRDRDRDRDRDRDRDRYRLRDEKEHGRDRDREREGRERERRDRDRDRGRRRSHSRSRSRSKDREDGEYRKRHTRSSTSPRRRDGAEDREEPKKKKEKKEKKEAGAGEEDPEIAEWNRIRASLGLAPLK

Homology

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BLAST of Cla97C02G040950 vs. NCBI nr
Match: XP_038890973.1 (pre-mRNA-splicing factor 38 [Benincasa hispida])

HSP 1 Score: 704.9 bits (1818), Expect = 4.0e-199
Identity = 392/405 (96.79%), Postives = 399/405 (98.52%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLSHVDEVIDELLTKDYSCDIALPRIKKRWTLESSGSLPAR 180
           EPLYNDYRKLRRKLADGCF+LSHVDEVIDELLTKDYSCDIALPR+KKRWTLESSGSLPAR
Sbjct: 121 EPLYNDYRKLRRKLADGCFALSHVDEVIDELLTKDYSCDIALPRVKKRWTLESSGSLPAR 180

Query: 181 KSALEDDFEEEEEKEEVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYD 240
           KSALEDDFEEEEEKEE EPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYD
Sbjct: 181 KSALEDDFEEEEEKEEAEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYD 240

Query: 241 RDRDYDRDYDRDRGRGRERDRDRE--RDRDRDRDRDRDRDRDRDRDRDRDRDRYRLRDEK 300
           RDRDYDRDYDRDRGRGRERDRDRE  RDRDRDRDRDRDRDRDRDRDRDRDRDR+RLRDEK
Sbjct: 241 RDRDYDRDYDRDRGRGRERDRDRERDRDRDRDRDRDRDRDRDRDRDRDRDRDRHRLRDEK 300

Query: 301 EHGRDRDREREGRERERRDRDRDRGRRRSHSRSRSRSKDREDGEYRKRHTRSSTSPRRRD 360
           E+GRDRDREREGRERER  RDRDRGRRRSHS+SRSRSKDREDGEYRKRH+RSS SPRRRD
Sbjct: 301 EYGRDRDREREGRERER--RDRDRGRRRSHSKSRSRSKDREDGEYRKRHSRSSVSPRRRD 360

Query: 361 GAEDREEPKKKKEKKEKKEAGAGEEDPEIAEWNRIRASLGLAPLK 404
           GAEDREEP+KKKEKKEKKEAGAGEEDPEIAEWNRIRASLGLAPLK
Sbjct: 361 GAEDREEPRKKKEKKEKKEAGAGEEDPEIAEWNRIRASLGLAPLK 403

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BLAST of Cla97C02G040950 vs. NCBI nr
Match: XP_031737285.1 (pre-mRNA-splicing factor 38 [Cucumis sativus] >KAE8651621.1 hypothetical protein Csa_021262 [Cucumis sativus])

HSP 1 Score: 703.7 bits (1815), Expect = 8.9e-199
Identity = 392/409 (95.84%), Postives = 397/409 (97.07%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLSHVDEVIDELLTKDYSCDIALPRIKKRWTLESSGSLPAR 180
           EPLYNDYRKLRRKLADGCFSLSHVDEVIDELLTKDYSCD+ALPR+KKRWTLES+GSLP R
Sbjct: 121 EPLYNDYRKLRRKLADGCFSLSHVDEVIDELLTKDYSCDVALPRVKKRWTLESAGSLPPR 180

Query: 181 KSALEDDFEEEEEKEEVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYD 240
           KSALEDDFEEEEEKEE EPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYD
Sbjct: 181 KSALEDDFEEEEEKEEAEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYD 240

Query: 241 RDRDYDRDYDRDRGRGRERDRDRERD------RDRDRDRDRDRDRDRDRDRDRDRDRYRL 300
           RDRDYDRDYDRDRGRGRERDRDRERD      RDRDRDRDRDRDRDRDRDRDRDRDRYRL
Sbjct: 241 RDRDYDRDYDRDRGRGRERDRDRERDRDRDRERDRDRDRDRDRDRDRDRDRDRDRDRYRL 300

Query: 301 RDEKEHGRDRDREREGRERERRDRDRDRGRRRSHSRSRSRSKDREDGEYRKRHTRSSTSP 360
           RDEKE+GRDRDREREGRERER  RDRDRGRRRSHSRSRSRSKDREDGEYRKRH+RSS SP
Sbjct: 301 RDEKEYGRDRDREREGRERER--RDRDRGRRRSHSRSRSRSKDREDGEYRKRHSRSSVSP 360

Query: 361 RRRDGAEDREEPKKKKEKKEKKEAGAGEEDPEIAEWNRIRASLGLAPLK 404
           RRRDGAEDREEPKKKKEKKEKKE GAGEEDPEIAEWNRIRASLGLAPLK
Sbjct: 361 RRRDGAEDREEPKKKKEKKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK 407

[Close]

BLAST of Cla97C02G040950 vs. NCBI nr
Match: XP_008453888.1 (PREDICTED: pre-mRNA-splicing factor 38 [Cucumis melo])

HSP 1 Score: 694.1 bits (1790), Expect = 7.0e-196
Identity = 385/403 (95.53%), Postives = 392/403 (97.27%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLSHVDEVIDELLTKDYSCDIALPRIKKRWTLESSGSLPAR 180
           EPLYNDYRKLRRKL+DGCFSLSHVDEVIDELLTKDYSCDIALPR+KKRWTLESSGSLP R
Sbjct: 121 EPLYNDYRKLRRKLSDGCFSLSHVDEVIDELLTKDYSCDIALPRVKKRWTLESSGSLPPR 180

Query: 181 KSALEDDFEEEEEKEEVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYD 240
           KSALEDDFEEEEEKEE EPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYD
Sbjct: 181 KSALEDDFEEEEEKEEAEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYD 240

Query: 241 RDRDYDRDYDRDRGRGRERDRDRERDRDRDRDRDRDRDRDRDRDRDRDRDRYRLRDEKEH 300
           RDRDYDRDYDRDRGRGRERDRDRE    RDRDR+RDRDRDR+R+RDRDRDRYRLRDEKE+
Sbjct: 241 RDRDYDRDYDRDRGRGRERDRDRE----RDRDRERDRDRDRERERDRDRDRYRLRDEKEY 300

Query: 301 GRDRDREREGRERERRDRDRDRGRRRSHSRSRSRSKDREDGEYRKRHTRSSTSPRRRDGA 360
           GRDRDREREGRERER  RDRDRGRRRSHSRSRSRSKDREDGEYRKRH+RSS SPRRRDG 
Sbjct: 301 GRDRDREREGRERER--RDRDRGRRRSHSRSRSRSKDREDGEYRKRHSRSSVSPRRRDGV 360

Query: 361 EDREEPKKKKEKKEKKEAGAGEEDPEIAEWNRIRASLGLAPLK 404
           EDREEPKKKKEKKEKKE GAGEEDPEIAEWNRIRASLGLAPLK
Sbjct: 361 EDREEPKKKKEKKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK 397

[Close]

BLAST of Cla97C02G040950 vs. NCBI nr
Match: KAG7030134.1 (Pre-mRNA-splicing factor 38 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 683.7 bits (1763), Expect = 9.5e-193
Identity = 382/407 (93.86%), Postives = 391/407 (96.07%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQN YWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLSHVDEVIDELLTKDYSCDIALPRIKKRWTLESSGSLPAR 180
           EPLYNDYRKLRRKLADGCFSL+HVDEVIDELLTKDYSCDIALPR+KKRWTLES+GSLPAR
Sbjct: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTGSLPAR 180

Query: 181 KSALEDDFEEEEEKEEVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYD 240
           KSALEDDFEEEEEKE+VEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDY+
Sbjct: 181 KSALEDDFEEEEEKEDVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYE 240

Query: 241 RDRDYDRDYDRDRGRGRERDRDRERDRDRDRDRDRDRDRDRDRDRDRDRDRYRLRDEKEH 300
           RDRD DRDYDRDRGRGRERDRDRE    RDRDRDRDRDRDRDRDRDRDRDRY LRDEKE+
Sbjct: 241 RDRDNDRDYDRDRGRGRERDRDRE----RDRDRDRDRDRDRDRDRDRDRDRYHLRDEKEY 300

Query: 301 GRDRDREREG----RERERRDRDRDRGRRRSHSRSRSRSKDREDGEYRKRHTRSSTSPRR 360
           GRDRDREREG    RERER  RDRDRGRRRSHSRSRSRSKDREDGEYRKRHTRSS SPRR
Sbjct: 301 GRDRDREREGRERERERERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRHTRSSISPRR 360

Query: 361 RDGAEDREEPKKKKEKKEKKEAGAGEEDPEIAEWNRIRASLGLAPLK 404
           R+GAEDREEPK+KKEKKEKK  GAGEEDPEIAEWNRIRASLG+APLK
Sbjct: 361 RNGAEDREEPKRKKEKKEKKGDGAGEEDPEIAEWNRIRASLGMAPLK 403

[Close]

BLAST of Cla97C02G040950 vs. NCBI nr
Match: XP_022937574.1 (pre-mRNA-splicing factor 38-like [Cucurbita moschata] >XP_022937575.1 pre-mRNA-splicing factor 38-like [Cucurbita moschata])

HSP 1 Score: 682.2 bits (1759), Expect = 2.8e-192
Identity = 378/403 (93.80%), Postives = 391/403 (97.02%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           +GGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61  HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLSHVDEVIDELLTKDYSCDIALPRIKKRWTLESSGSLPAR 180
           EPLYNDYRKLRR+LADGCFSL+HVDEVIDELLTKDYSCDIALPR+KKRW LES+GSLPAR
Sbjct: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180

Query: 181 KSALEDDFEEEEEKEEVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYD 240
           KSALEDDFEEEEEKE+VEPIND+LED+IHEKNYYRGRSPVRERD+DRR DSHRHRDRDYD
Sbjct: 181 KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPVRERDKDRRHDSHRHRDRDYD 240

Query: 241 RDRDYDRDYDRDRGRGRERDRDRERDRDRDRDRDRDRDRDRDRDRDRDRDRYRLRDEKEH 300
           RDRDYDRDYDRDRGRGRERDRD  RDRDRDRDRDRDRDR RDRDRDRDRDRYRLRD+KE+
Sbjct: 241 RDRDYDRDYDRDRGRGRERDRD--RDRDRDRDRDRDRDRGRDRDRDRDRDRYRLRDDKEY 300

Query: 301 GRDRDREREGRERERRDRDRDRGRRRSHSRSRSRSKDREDGEYRKRHTRSSTSPRRRDGA 360
            RDRDREREGRERERRDRD   GRRRSHSRSRSRSKDREDGEYRKRH RSS SPRRRDGA
Sbjct: 301 SRDRDREREGRERERRDRDH-HGRRRSHSRSRSRSKDREDGEYRKRHARSSASPRRRDGA 360

Query: 361 EDREEPKKKKEKKEKKEAGAGEEDPEIAEWNRIRASLGLAPLK 404
           EDR+EPK+KKEKKEKKE GAGEEDPEIAEWNRIRASLGLAPLK
Sbjct: 361 EDRDEPKRKKEKKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK 400

[Close]

BLAST of Cla97C02G040950 vs. ExPASy Swiss-Prot
Match: Q8LB54 (Pre-mRNA-splicing factor 38 OS=Arabidopsis thaliana OX=3702 GN=PRP38 PE=1 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 4.2e-127
Identity = 278/408 (68.14%), Postives = 311/408 (76.23%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDP AK+IRGTNPQNLVEKI+R+KIYQ+T+WKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPLAKNIRGTNPQNLVEKIVRTKIYQHTFWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           +GG+RKPTPF+CL++KMLQIQPEKEIV+EFIKN+DYKYVR+LGAFYLRLTGTDVDVYRYL
Sbjct: 61  FGGSRKPTPFLCLILKMLQIQPEKEIVVEFIKNDDYKYVRILGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLSHVDEVIDELLTKDYSCDIALPRIKKRWTLESSGSLPAR 180
           EPLYNDYRK+R+KL+DG FSL+HVDEVI+ELLTKDYSCDIA+PR+KKRWTLE +G L  R
Sbjct: 121 EPLYNDYRKVRQKLSDGKFSLTHVDEVIEELLTKDYSCDIAMPRLKKRWTLEQNGLLEPR 180

Query: 181 KSALEDDFEEEEEKEEVEPINDSLEDDIHEKNYYRGRSP--VRERDRDRRRDSHRHRDRD 240
           KS LEDDFEEEEEKEE E I D  ED++ +    R +SP   RERDRDRRRDSHRHRDRD
Sbjct: 181 KSVLEDDFEEEEEKEENEGIADGSEDEMDQ----RRKSPERERERDRDRRRDSHRHRDRD 240

Query: 241 YDRDRDYDRDYDRD--RGRGRERDRDRERDRDRDRDRDRDRDRDRDRDRDRDRDRYRLRD 300
           YDRD D DRD+DRD  R RG  RDRDRERDRD  R+RDRDR+R RDR+RDR         
Sbjct: 241 YDRDYDMDRDHDRDYERERGHGRDRDRERDRDHYRERDRDRERGRDRERDR--------- 300

Query: 301 EKEHGRDRDREREGRERERRDRDRDRGRRRSHSRSRSRSKDREDGEYRKRHTRSSTSPRR 360
                                  RDR RRRS SRSR           RKRH         
Sbjct: 301 -----------------------RDRARRRSRSRSRD----------RKRH--------E 354

Query: 361 RDGAEDREEPKKKKEKKEK-KEAGAGEEDPEIAEWNRIRASLGLAPLK 404
            D   DREEPKKKKEKKEK KE G    +PEIAE NR+RASLG+ PL+
Sbjct: 361 TDDVRDREEPKKKKEKKEKMKEDGTDHPNPEIAEMNRLRASLGMKPLR 354

[Close]

BLAST of Cla97C02G040950 vs. ExPASy Swiss-Prot
Match: Q7JVL3 (Pre-mRNA-splicing factor 38 OS=Drosophila melanogaster OX=7227 GN=Prp38 PE=1 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 1.4e-66
Identity = 179/336 (53.27%), Postives = 228/336 (67.86%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRT   AK++ GTNPQ L+EKI+RS+IY + YWKEQCF LTAE LVDKAMEL  +GG 
Sbjct: 1   MANRTVKEAKNVHGTNPQYLIEKIIRSRIYDSKYWKEQCFALTAELLVDKAMELRFVGGV 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           YGGN KPT F+CL +KMLQIQPEK+IV+EFIKNE++KYVR LGAFYLRLTG  +D Y+YL
Sbjct: 61  YGGNIKPTQFLCLTLKMLQIQPEKDIVVEFIKNEEFKYVRALGAFYLRLTGAALDCYKYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLSHVDEVIDELLTKDYSCDIALPRIKKRWTLESSGSLPAR 180
           EPLY D RKLRR+   G F + ++DE IDELL  D  CDI LPRI+KR  LE +  +  +
Sbjct: 121 EPLYIDNRKLRRQNRAGQFEIVYMDEYIDELLRNDRVCDIILPRIQKRSILEENNEIEPK 180

Query: 181 KSALEDDFEEE--EEKEEVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRR-----DSHR 240
            S L++D ++E   ++E+ +  N   E+    +   R RS  R R R+R R     +S R
Sbjct: 181 VSVLDEDLDDELPSDEEKADETNRPKENSTAVRRPRRVRSKSRSRSRERERRSGQGNSAR 240

Query: 241 HRD-----RDYDRDRD-------YDRDYDRDRGRGRERDRDRERDRDRDRDRDRDRDRDR 300
            RD      DYDR R+       ++ DYDR +  GR  DR+RER +DRD  R+R+RD DR
Sbjct: 241 SRDYYDELEDYDRQRNRVRNRDTHNEDYDRRQNNGR-HDRERER-QDRDSIRERERDGDR 300

Query: 301 DRDRDRDRDRYRLRDEKEHGRDRDREREGR-ERERR 317
           DR RDR+R+R     E++ GR   RER+ R ER+RR
Sbjct: 301 DR-RDRERER-----ERDRGRHDQRERDSRGERDRR 328

[Close]

BLAST of Cla97C02G040950 vs. ExPASy Swiss-Prot
Match: Q6DHU4 (Pre-mRNA-splicing factor 38A OS=Danio rerio OX=7955 GN=prpf38a PE=2 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.4e-61
Identity = 177/350 (50.57%), Postives = 214/350 (61.14%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRT   A S+ GTNPQ LVEKI+R++IY++ YWKE+CFGLTAE +VDKAMEL  +GG 
Sbjct: 1   MANRTVKDANSVHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKFVGGV 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           YGGN KPTPF+CL +KMLQIQPEK+I++EFIKNED+KYVR+LGA Y+RLTGT VD Y+YL
Sbjct: 61  YGGNVKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRLLGAMYMRLTGTSVDCYKYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLSHVDEVIDELLTKDYSCDIALPRIKKRWTLESSGSLPAR 180
           EPLYNDYRK++ +  +G F L HVDE IDELL  +  CDI LPR++KR  LE +  L  R
Sbjct: 121 EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHAERMCDIILPRLQKRQVLEEAELLDPR 180

Query: 181 KSALEDDFEEEEEKEEVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYD 240
            SALE+D +E E  EE        EDD  EK       P R +  +  R S+R       
Sbjct: 181 ISALEEDLDEVETSEE--------EDDEDEK-------PERMQSPEPHRRSYR------- 240

Query: 241 RDRDYDRDYDRDRGRGRERDRDRERDRDRDRDRDRDRDRDRDRDRDRDRDRYRLRDEKEH 300
                    D DR R     R R     R R R   R R     R+RDRDR+R +  + H
Sbjct: 241 ---------DMDRPRRSPSPRYRRSRSPRRRSRSPKR-RSPSPRRERDRDRHRSKSPRRH 300

Query: 301 GRDRDREREGRERERRDRDRDRGRRRSHSRSRSRSKDREDGEYRKRHTRS 351
                     R RERR R +  G  RSH R RS SK  E    +K H RS
Sbjct: 301 --------RSRSRERRHRSKSPGHHRSH-RHRSHSKSPE-SRSKKSHKRS 308

[Close]

BLAST of Cla97C02G040950 vs. ExPASy Swiss-Prot
Match: Q0P5I6 (Pre-mRNA-splicing factor 38A OS=Bos taurus OX=9913 GN=PRPF38A PE=2 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 1.2e-60
Identity = 159/322 (49.38%), Postives = 209/322 (64.91%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRT   A SI GTNPQ LVEKI+R++IY++ YWKE+CFGLTAE +VDKAMEL  +GG 
Sbjct: 1   MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELRFVGGV 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           YGGN KPTPF+CL +KMLQIQPEK+I++EFIKNED+KYVR+LGA Y+RLTGT +D Y+YL
Sbjct: 61  YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLSHVDEVIDELLTKDYSCDIALPRIKKRWTLESSGSLPAR 180
           EPLYNDYRK++ +  +G F L HVDE IDELL  +  CDI LPR++KR+ LE +  L  R
Sbjct: 121 EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHSERVCDIILPRLQKRYVLEEAEQLEPR 180

Query: 181 KSALEDDFEEEEEKEEVEPINDSLE---DDIHEKNYYRGRSPVRERDRDRRRDSHRHRDR 240
            SALE+D ++ E  EE E  ++ LE      H +  Y      R+ D+ RR  + R+R  
Sbjct: 181 VSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSY------RDLDKPRRSPTLRYR-- 240

Query: 241 DYDRDRDYDRDYDRDRGRGRERDRDRERDRDRDRDRDRDRDRDRDRDRDRDRDRYRLRDE 300
              R R   R     + R     R+R R +   R R R RDR R R R +    +R    
Sbjct: 241 -RSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDR-RHRSRSKSPGHHRSHRH 300

Query: 301 KEHGRDRDREREGRERERRDRD 320
           + H +  +R ++  ++ RR  +
Sbjct: 301 RSHSKSPERSKKSHKKSRRGNE 312

[Close]

BLAST of Cla97C02G040950 vs. ExPASy Swiss-Prot
Match: Q8NAV1 (Pre-mRNA-splicing factor 38A OS=Homo sapiens OX=9606 GN=PRPF38A PE=1 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 1.2e-60
Identity = 159/322 (49.38%), Postives = 209/322 (64.91%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRT   A SI GTNPQ LVEKI+R++IY++ YWKE+CFGLTAE +VDKAMEL  +GG 
Sbjct: 1   MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELRFVGGV 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           YGGN KPTPF+CL +KMLQIQPEK+I++EFIKNED+KYVR+LGA Y+RLTGT +D Y+YL
Sbjct: 61  YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLSHVDEVIDELLTKDYSCDIALPRIKKRWTLESSGSLPAR 180
           EPLYNDYRK++ +  +G F L HVDE IDELL  +  CDI LPR++KR+ LE +  L  R
Sbjct: 121 EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHSERVCDIILPRLQKRYVLEEAEQLEPR 180

Query: 181 KSALEDDFEEEEEKEEVEPINDSLE---DDIHEKNYYRGRSPVRERDRDRRRDSHRHRDR 240
            SALE+D ++ E  EE E  ++ LE      H +  Y      R+ D+ RR  + R+R  
Sbjct: 181 VSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSY------RDLDKPRRSPTLRYR-- 240

Query: 241 DYDRDRDYDRDYDRDRGRGRERDRDRERDRDRDRDRDRDRDRDRDRDRDRDRDRYRLRDE 300
              R R   R     + R     R+R R +   R R R RDR R R R +    +R    
Sbjct: 241 -RSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDR-RHRSRSKSPGHHRSHRH 300

Query: 301 KEHGRDRDREREGRERERRDRD 320
           + H +  +R ++  ++ RR  +
Sbjct: 301 RSHSKSPERSKKSHKKSRRGNE 312

[Close]

BLAST of Cla97C02G040950 vs. ExPASy TrEMBL
Match: A0A1S3BXB0 (Pre-mRNA-splicing factor 38 OS=Cucumis melo OX=3656 GN=LOC103494470 PE=3 SV=1)

HSP 1 Score: 694.1 bits (1790), Expect = 3.4e-196
Identity = 385/403 (95.53%), Postives = 392/403 (97.27%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLSHVDEVIDELLTKDYSCDIALPRIKKRWTLESSGSLPAR 180
           EPLYNDYRKLRRKL+DGCFSLSHVDEVIDELLTKDYSCDIALPR+KKRWTLESSGSLP R
Sbjct: 121 EPLYNDYRKLRRKLSDGCFSLSHVDEVIDELLTKDYSCDIALPRVKKRWTLESSGSLPPR 180

Query: 181 KSALEDDFEEEEEKEEVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYD 240
           KSALEDDFEEEEEKEE EPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYD
Sbjct: 181 KSALEDDFEEEEEKEEAEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYD 240

Query: 241 RDRDYDRDYDRDRGRGRERDRDRERDRDRDRDRDRDRDRDRDRDRDRDRDRYRLRDEKEH 300
           RDRDYDRDYDRDRGRGRERDRDRE    RDRDR+RDRDRDR+R+RDRDRDRYRLRDEKE+
Sbjct: 241 RDRDYDRDYDRDRGRGRERDRDRE----RDRDRERDRDRDRERERDRDRDRYRLRDEKEY 300

Query: 301 GRDRDREREGRERERRDRDRDRGRRRSHSRSRSRSKDREDGEYRKRHTRSSTSPRRRDGA 360
           GRDRDREREGRERER  RDRDRGRRRSHSRSRSRSKDREDGEYRKRH+RSS SPRRRDG 
Sbjct: 301 GRDRDREREGRERER--RDRDRGRRRSHSRSRSRSKDREDGEYRKRHSRSSVSPRRRDGV 360

Query: 361 EDREEPKKKKEKKEKKEAGAGEEDPEIAEWNRIRASLGLAPLK 404
           EDREEPKKKKEKKEKKE GAGEEDPEIAEWNRIRASLGLAPLK
Sbjct: 361 EDREEPKKKKEKKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK 397

[Close]

BLAST of Cla97C02G040950 vs. ExPASy TrEMBL
Match: A0A6J1FBK8 (Pre-mRNA-splicing factor 38 OS=Cucurbita moschata OX=3662 GN=LOC111443943 PE=3 SV=1)

HSP 1 Score: 682.2 bits (1759), Expect = 1.3e-192
Identity = 378/403 (93.80%), Postives = 391/403 (97.02%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           +GGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61  HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLSHVDEVIDELLTKDYSCDIALPRIKKRWTLESSGSLPAR 180
           EPLYNDYRKLRR+LADGCFSL+HVDEVIDELLTKDYSCDIALPR+KKRW LES+GSLPAR
Sbjct: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180

Query: 181 KSALEDDFEEEEEKEEVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYD 240
           KSALEDDFEEEEEKE+VEPIND+LED+IHEKNYYRGRSPVRERD+DRR DSHRHRDRDYD
Sbjct: 181 KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPVRERDKDRRHDSHRHRDRDYD 240

Query: 241 RDRDYDRDYDRDRGRGRERDRDRERDRDRDRDRDRDRDRDRDRDRDRDRDRYRLRDEKEH 300
           RDRDYDRDYDRDRGRGRERDRD  RDRDRDRDRDRDRDR RDRDRDRDRDRYRLRD+KE+
Sbjct: 241 RDRDYDRDYDRDRGRGRERDRD--RDRDRDRDRDRDRDRGRDRDRDRDRDRYRLRDDKEY 300

Query: 301 GRDRDREREGRERERRDRDRDRGRRRSHSRSRSRSKDREDGEYRKRHTRSSTSPRRRDGA 360
            RDRDREREGRERERRDRD   GRRRSHSRSRSRSKDREDGEYRKRH RSS SPRRRDGA
Sbjct: 301 SRDRDREREGRERERRDRDH-HGRRRSHSRSRSRSKDREDGEYRKRHARSSASPRRRDGA 360

Query: 361 EDREEPKKKKEKKEKKEAGAGEEDPEIAEWNRIRASLGLAPLK 404
           EDR+EPK+KKEKKEKKE GAGEEDPEIAEWNRIRASLGLAPLK
Sbjct: 361 EDRDEPKRKKEKKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK 400

[Close]

BLAST of Cla97C02G040950 vs. ExPASy TrEMBL
Match: A0A6J1G4M6 (Pre-mRNA-splicing factor 38 OS=Cucurbita moschata OX=3662 GN=LOC111450740 PE=3 SV=1)

HSP 1 Score: 681.4 bits (1757), Expect = 2.3e-192
Identity = 380/405 (93.83%), Postives = 389/405 (96.05%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQN YWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLSHVDEVIDELLTKDYSCDIALPRIKKRWTLESSGSLPAR 180
           EPLYNDYRKLRRKLADGCFSL+HVDEVIDELLTKDYSCDIALPR+KKRWTLES+GSLPAR
Sbjct: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTGSLPAR 180

Query: 181 KSALEDDFEEEEEKEEVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYD 240
           KSALEDDFEEEEEKE+VEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDY+
Sbjct: 181 KSALEDDFEEEEEKEDVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYE 240

Query: 241 RDRDYDRDYDRDRGRGRERDRDRERDRDRDRDRDRDRDRDRDRDRDRDRDRYRLRDEKEH 300
           RDRD DRDYDRDRGRGRERDRDRE      RDRDRDRDRDRDRDRDRDRDRY LRDEKE+
Sbjct: 241 RDRDNDRDYDRDRGRGRERDRDRE------RDRDRDRDRDRDRDRDRDRDRYHLRDEKEY 300

Query: 301 GRDRDREREG--RERERRDRDRDRGRRRSHSRSRSRSKDREDGEYRKRHTRSSTSPRRRD 360
           GRDRDREREG  RERER  RDRDRGRRRSHSRSRSRSKDREDGEYRKRHTRSS SPRRR+
Sbjct: 301 GRDRDREREGRERERERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRHTRSSISPRRRN 360

Query: 361 GAEDREEPKKKKEKKEKKEAGAGEEDPEIAEWNRIRASLGLAPLK 404
           GAEDREEPK+KKEKKEKK  GAGEEDPEIAEWNRIRASLG+APLK
Sbjct: 361 GAEDREEPKRKKEKKEKKGDGAGEEDPEIAEWNRIRASLGMAPLK 399

[Close]

BLAST of Cla97C02G040950 vs. ExPASy TrEMBL
Match: A0A6J1HPQ9 (Pre-mRNA-splicing factor 38 OS=Cucurbita maxima OX=3661 GN=LOC111465574 PE=3 SV=1)

HSP 1 Score: 671.8 bits (1732), Expect = 1.8e-189
Identity = 372/403 (92.31%), Postives = 386/403 (95.78%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           +GGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61  HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLSHVDEVIDELLTKDYSCDIALPRIKKRWTLESSGSLPAR 180
           EPLYNDYRKLRR+LADGCFSL+HVDEVIDELLTKDYSCDIALPR+KKRW LES+GSLPAR
Sbjct: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180

Query: 181 KSALEDDFEEEEEKEEVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYD 240
           KSALEDDFEEEEEKE+VEPIND+LED+IHEKNYYRGRSPVRERD+DRRRDSHRHRDRDYD
Sbjct: 181 KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPVRERDKDRRRDSHRHRDRDYD 240

Query: 241 RDRDYDRDYDRDRGRGRERDRDRERDRDRDRDRDRDRDRDRDRDRDRDRDRYRLRDEKEH 300
           RDRDYDRDYDRDRGRG      RERDRDRDRDRDRDRDRDR RDRDRDRDRYRLRD+KE+
Sbjct: 241 RDRDYDRDYDRDRGRG------RERDRDRDRDRDRDRDRDRGRDRDRDRDRYRLRDDKEY 300

Query: 301 GRDRDREREGRERERRDRDRDRGRRRSHSRSRSRSKDREDGEYRKRHTRSSTSPRRRDGA 360
            RDRD EREGRERERRDRD   GRRRSHSR+RSRSKDREDGEYRKRH R S SPRRRDGA
Sbjct: 301 SRDRDGEREGRERERRDRDH-HGRRRSHSRNRSRSKDREDGEYRKRHARCSASPRRRDGA 360

Query: 361 EDREEPKKKKEKKEKKEAGAGEEDPEIAEWNRIRASLGLAPLK 404
           EDR+EPK+KKEKKEKKE GAGEEDPEIAEWNRIRASLGLAPLK
Sbjct: 361 EDRDEPKRKKEKKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK 396

[Close]

BLAST of Cla97C02G040950 vs. ExPASy TrEMBL
Match: A0A6J1DS16 (Pre-mRNA-splicing factor 38 OS=Momordica charantia OX=3673 GN=LOC111023319 PE=3 SV=1)

HSP 1 Score: 663.3 bits (1710), Expect = 6.4e-187
Identity = 376/418 (89.95%), Postives = 393/418 (94.02%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           +GGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61  FGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLSHVDEVIDELLTKDYSCDIALPRIKKRWTLESSGSLPAR 180
           EPLYNDYRKLRRKLADGCFSL+HVDEVIDELLTKDYSCDIA+PR+KKRWTLES+G LPAR
Sbjct: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIAMPRVKKRWTLESTGLLPAR 180

Query: 181 KSALEDDFEEEEEKEEVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYD 240
           KSALEDDFEEEEEKE+ E +ND LED+IHEKN+YRGRSP RERDRDRRRDSHRHRDRDYD
Sbjct: 181 KSALEDDFEEEEEKEDAEALND-LEDEIHEKNHYRGRSPGRERDRDRRRDSHRHRDRDYD 240

Query: 241 RDRDYDRDYDRDRGRGRERDRDRE----------RDRDRDRDRDRDRDRDRDRDRDRDRD 300
           RDRDYDRDYDRDRGRGRERDRDRE          RDRDRDRDRDRDRDRDR+RDRDRDRD
Sbjct: 241 RDRDYDRDYDRDRGRGRERDRDRERDRDRDRERDRDRDRDRDRDRDRDRDRERDRDRDRD 300

Query: 301 RYRLRDEKEHGRDRDREREGRERERRDRDRDRGRRRSHSRSRSRSKDREDGEYRKRHTRS 360
           RYRLRDEKE+GRDR+REREGRER+RRDRDRDRGRRRSHSRSRSRSKDREDGE+RKRH RS
Sbjct: 301 RYRLRDEKEYGRDREREREGRERDRRDRDRDRGRRRSHSRSRSRSKDREDGEHRKRHARS 360

Query: 361 STSPRRRDGAEDREEPKKKKEK----KEKKEAGAG-EEDPEIAEWNRIRASLGLAPLK 404
           S SPRRRDGAED +EPK+KKEK    KEKKE GAG  EDPEIAEWNRIRASLG+APLK
Sbjct: 361 SASPRRRDGAEDIDEPKRKKEKKEKEKEKKENGAGVAEDPEIAEWNRIRASLGMAPLK 417

[Close]

BLAST of Cla97C02G040950 vs. TAIR 10
Match: AT2G40650.1 (PRP38 family protein )

HSP 1 Score: 456.1 bits (1172), Expect = 3.0e-128
Identity = 278/408 (68.14%), Postives = 311/408 (76.23%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDP AK+IRGTNPQNLVEKI+R+KIYQ+T+WKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPLAKNIRGTNPQNLVEKIVRTKIYQHTFWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           +GG+RKPTPF+CL++KMLQIQPEKEIV+EFIKN+DYKYVR+LGAFYLRLTGTDVDVYRYL
Sbjct: 61  FGGSRKPTPFLCLILKMLQIQPEKEIVVEFIKNDDYKYVRILGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLSHVDEVIDELLTKDYSCDIALPRIKKRWTLESSGSLPAR 180
           EPLYNDYRK+R+KL+DG FSL+HVDEVI+ELLTKDYSCDIA+PR+KKRWTLE +G L  R
Sbjct: 121 EPLYNDYRKVRQKLSDGKFSLTHVDEVIEELLTKDYSCDIAMPRLKKRWTLEQNGLLEPR 180

Query: 181 KSALEDDFEEEEEKEEVEPINDSLEDDIHEKNYYRGRSP--VRERDRDRRRDSHRHRDRD 240
           KS LEDDFEEEEEKEE E I D  ED++ +    R +SP   RERDRDRRRDSHRHRDRD
Sbjct: 181 KSVLEDDFEEEEEKEENEGIADGSEDEMDQ----RRKSPERERERDRDRRRDSHRHRDRD 240

Query: 241 YDRDRDYDRDYDRD--RGRGRERDRDRERDRDRDRDRDRDRDRDRDRDRDRDRDRYRLRD 300
           YDRD D DRD+DRD  R RG  RDRDRERDRD  R+RDRDR+R RDR+RDR         
Sbjct: 241 YDRDYDMDRDHDRDYERERGHGRDRDRERDRDHYRERDRDRERGRDRERDR--------- 300

Query: 301 EKEHGRDRDREREGRERERRDRDRDRGRRRSHSRSRSRSKDREDGEYRKRHTRSSTSPRR 360
                                  RDR RRRS SRSR           RKRH         
Sbjct: 301 -----------------------RDRARRRSRSRSRD----------RKRH--------E 354

Query: 361 RDGAEDREEPKKKKEKKEK-KEAGAGEEDPEIAEWNRIRASLGLAPLK 404
            D   DREEPKKKKEKKEK KE G    +PEIAE NR+RASLG+ PL+
Sbjct: 361 TDDVRDREEPKKKKEKKEKMKEDGTDHPNPEIAEMNRLRASLGMKPLR 354

The following BLAST results are available for this feature:

BLAST of Cla97C02G040950 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890973.1	4.0e-199	96.79	pre-mRNA-splicing factor 38 [Benincasa hispida]	[more]
XP_031737285.1	8.9e-199	95.84	pre-mRNA-splicing factor 38 [Cucumis sativus] >KAE8651621.1 hypothetical protein...	[more]
XP_008453888.1	7.0e-196	95.53	PREDICTED: pre-mRNA-splicing factor 38 [Cucumis melo]	[more]
KAG7030134.1	9.5e-193	93.86	Pre-mRNA-splicing factor 38 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022937574.1	2.8e-192	93.80	pre-mRNA-splicing factor 38-like [Cucurbita moschata] >XP_022937575.1 pre-mRNA-s...	[more]

BLAST of Cla97C02G040950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LB54	4.2e-127	68.14	Pre-mRNA-splicing factor 38 OS=Arabidopsis thaliana OX=3702 GN=PRP38 PE=1 SV=1	[more]
Q7JVL3	1.4e-66	53.27	Pre-mRNA-splicing factor 38 OS=Drosophila melanogaster OX=7227 GN=Prp38 PE=1 SV=...	[more]
Q6DHU4	1.4e-61	50.57	Pre-mRNA-splicing factor 38A OS=Danio rerio OX=7955 GN=prpf38a PE=2 SV=1	[more]
Q0P5I6	1.2e-60	49.38	Pre-mRNA-splicing factor 38A OS=Bos taurus OX=9913 GN=PRPF38A PE=2 SV=1	[more]
Q8NAV1	1.2e-60	49.38	Pre-mRNA-splicing factor 38A OS=Homo sapiens OX=9606 GN=PRPF38A PE=1 SV=1	[more]

BLAST of Cla97C02G040950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BXB0	3.4e-196	95.53	Pre-mRNA-splicing factor 38 OS=Cucumis melo OX=3656 GN=LOC103494470 PE=3 SV=1	[more]
A0A6J1FBK8	1.3e-192	93.80	Pre-mRNA-splicing factor 38 OS=Cucurbita moschata OX=3662 GN=LOC111443943 PE=3 S...	[more]
A0A6J1G4M6	2.3e-192	93.83	Pre-mRNA-splicing factor 38 OS=Cucurbita moschata OX=3662 GN=LOC111450740 PE=3 S...	[more]
A0A6J1HPQ9	1.8e-189	92.31	Pre-mRNA-splicing factor 38 OS=Cucurbita maxima OX=3661 GN=LOC111465574 PE=3 SV=...	[more]
A0A6J1DS16	6.4e-187	89.95	Pre-mRNA-splicing factor 38 OS=Momordica charantia OX=3673 GN=LOC111023319 PE=3 ...	[more]

BLAST of Cla97C02G040950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40650.1	3.0e-128	68.14	PRP38 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005037	Pre-mRNA-splicing factor 38	PFAM	PF03371	PRP38	coord: 10..173 e-value: 1.7E-61 score: 207.1
IPR005037	Pre-mRNA-splicing factor 38	PANTHER	PTHR23142	UNCHARACTERIZED	coord: 1..396
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 188..203
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 180..403
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 333..390
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 204..321
None	No IPR available	PANTHER	PTHR23142:SF1	PRE-MRNA-SPLICING FACTOR 38A	coord: 1..396

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C02G040950.1	Cla97C02G040950.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0071011	precatalytic spliceosome