Cla97C02G035340 (gene) Watermelon (97103) v2.5

Overview
NameCla97C02G035340
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionUnknown protein
LocationCla97Chr02: 11506277 .. 11506667 (+)
RNA-Seq ExpressionCla97C02G035340
SyntenyCla97C02G035340
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCATCTTCCTTCTTCAACTTTTCTTCCTCTCTTCACCCATCTCATTCATCTTACCACTCCTTTTTCTTCTTTGAGTTTCCTCGAACCTCTCCCAATTTCAATCCATCTTTCTCTCTGATTCTGTTTTCTGATTTTCCTTCCTCCTTCTAGAAAATTTAGTAGAAACAATGACCATGACAATCATCCCACTTCCTCTCTCAACCTCTTAAGGTCTTCTTGCCCTAAAACTCAACTTAACAACTCCACCCACAAACCCAAGAGCTTCGATGAGGTTTCGAAGGTGGATGCAAGAATGCAAATTGCAGATTCTATTACTAATGGCCTTCGGTTTGTTGATGTGGGTTTAGACTTGGATTTGGATCATGGGAGAGGGAGAGGGAGATGA

mRNA sequence

ATGGCTTCATCTTCCTTCTTCAACTTTTCTTCCTCTCTTCACCCATCTCATTCATCTTACCACTCCTTTTTCTTCTTTGAGTTTCCTCGAACCTCTCCCAATTTCAATCCATCTTTCTCTCTGATTCTAAAATTTAGTAGAAACAATGACCATGACAATCATCCCACTTCCTCTCTCAACCTCTTAAGGTCTTCTTGCCCTAAAACTCAACTTAACAACTCCACCCACAAACCCAAGAGCTTCGATGAGGTTTCGAAGGTGGATGCAAGAATGCAAATTGCAGATTCTATTACTAATGGCCTTCGGTTTGTTGATGTGGGTTTAGACTTGGATTTGGATCATGGGAGAGGGAGAGGGAGATGA

Coding sequence (CDS)

ATGGCTTCATCTTCCTTCTTCAACTTTTCTTCCTCTCTTCACCCATCTCATTCATCTTACCACTCCTTTTTCTTCTTTGAGTTTCCTCGAACCTCTCCCAATTTCAATCCATCTTTCTCTCTGATTCTAAAATTTAGTAGAAACAATGACCATGACAATCATCCCACTTCCTCTCTCAACCTCTTAAGGTCTTCTTGCCCTAAAACTCAACTTAACAACTCCACCCACAAACCCAAGAGCTTCGATGAGGTTTCGAAGGTGGATGCAAGAATGCAAATTGCAGATTCTATTACTAATGGCCTTCGGTTTGTTGATGTGGGTTTAGACTTGGATTTGGATCATGGGAGAGGGAGAGGGAGATGA

Protein sequence

MASSSFFNFSSSLHPSHSSYHSFFFFEFPRTSPNFNPSFSLILKFSRNNDHDNHPTSSLNLLRSSCPKTQLNNSTHKPKSFDEVSKVDARMQIADSITNGLRFVDVGLDLDLDHGRGRGR
Homology
[Close]
BLAST of Cla97C02G035340 vs. NCBI nr
Match: XP_038881193.1 (mitogen-activated protein kinase kinase kinase 3 isoform X1 [Benincasa hispida])

HSP 1 Score: 66.2 bits (160), Expect = 2.1e-07
Identity = 33/46 (71.74%), Postives = 35/46 (76.09%), Query Frame = 0 

Query: 42 ILKFSRNNDHDNHPTSSLNLLRSSCPKTQLNNSTHKPKSFDEVSKV 88
          + K SRN DH N PTSSLNL +SS PKTQ  N THKPKSFDEVS V
Sbjct: 6  VKKLSRNKDHHNQPTSSLNLFKSSSPKTQPKNPTHKPKSFDEVSAV 51

[Close]
BLAST of Cla97C02G035340 vs. NCBI nr
Match: XP_038881194.1 (mitogen-activated protein kinase kinase kinase 3 isoform X2 [Benincasa hispida])

HSP 1 Score: 66.2 bits (160), Expect = 2.1e-07
Identity = 33/46 (71.74%), Postives = 35/46 (76.09%), Query Frame = 0 

Query: 42 ILKFSRNNDHDNHPTSSLNLLRSSCPKTQLNNSTHKPKSFDEVSKV 88
          + K SRN DH N PTSSLNL +SS PKTQ  N THKPKSFDEVS V
Sbjct: 6  VKKLSRNKDHHNQPTSSLNLFKSSSPKTQPKNPTHKPKSFDEVSAV 51

The following BLAST results are available for this feature:
BLAST of Cla97C02G035340 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038881193.12.1e-0771.74mitogen-activated protein kinase kinase kinase 3 isoform X1 [Benincasa hispida][more]
XP_038881194.12.1e-0771.74mitogen-activated protein kinase kinase kinase 3 isoform X2 [Benincasa hispida][more]
BLAST of Cla97C02G035340 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cla97C02G035340 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cla97C02G035340 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C02G035340.1Cla97C02G035340.1mRNA