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Cla97C02G034770 (gene) Watermelon (97103) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTGAGAGTGGTTGTTTGCCAACTCAATATGCCTACCACCTTGAGGACAAGAACGAGTGAGGAGCTGGGGACATAATTATACAAGATGGAATTCACTCATTCCCATTTTTAGGGTAAGTAGATAAGTGTTCCCTTATGTGGTTTTTCTGGGACGTGAACAAAGGGTCCTACCCTCTCACTGGCCTAAGAGGGGTTTCTATTTAATGGTTGGACCATAAATAGGTTGTTCATTAGAGGATCACTGGTACTTAAGAATTTAGAAGTAACGTAGGGGTAAAACGGTAATTTGACCCAGTTGGTGTTACGAACACTTGTGAATGACTAATTTTCTATTATTGGTCTATATCTATGGACACAGAAATATATGAGAAGAGTGCAACTGTGGGTCTTTAGTAGAGTGTACCCATAACGAATATTGATTAATGTAGTTAATGAGTTTAGGTGATTAATCTTATATCGTTGGAGCTTCTGATCTGTAGGTTCATAAGGTCCCCTTCCTAGCTCACTATGGACCAACAAGGATCAACTATGTTGAAAGAAAATTTTGAAATATTCAAATTTATGAGGGAAAATATTTATTGTACTAGATACAATTAATTATATGATTTATTATAAATTTTATTTGAATGTGATTCAAATTATAACTTTATAATATGGAGAATTAATTTATTTGAATATGATTCAAATAATTAATTATTTATTTGGATAAAATCCTTATAAATAAATAGAGGGAGAATTATTAATTAATTAATTTAAATTGAATTCAAATAATTAATTATTTAATTTGGATGAGATCCAAATTAAAGATTCTGCATGAAAATAAATAGTGGGAGAATTTATTAATTAATTTGAATTGGATTCAAATAATTAATTATTTAATTTGGATGAGATCTAAATCAAAGATTCTGCAGAAAATAAATATTTAAATAAGATTTAAATATTTTAAACAATTTAATATGAGATATTATTTGGGTAGATATTTATTAATATTGGATATTATTAAATATTTGATTTAAAATCTCTACAGAGTAACCCTATAAAGAGGGCCCTTGGGAGACTTCATAGAACACACCCTCTAAAAGAGAATAATCTCTTCGATTATTCTAAAAATCTTCCTCTACTAATTCTCCCGATTTTCTTAGAAAATTTCTAAGAAAATTCTTCTTCCTATGCTTTCAAAGAAGCGGTTCCCACAAACCGGATCCTTGCTAGAGTCATAGCGAGGAAGATCTCTTGGAAAAGGAAGACTACTAAGAGAAGACTATTGGTTCGAGAATTATAGATTGGCAAAGGTATGATACTTAACCTTTTCTCTACTTTTTGTAATTTTAATTCTTTCAATAAATCAAAGAACACGATCACACGCTTCCGCGGGGATTCAATTCCCTTCAGGATGAAGTGCATGATGGTTGAGAGTGGTGATGCATGGGTCTCCTTAAAATAAAACTACTGATTTCTCTTTTTTAGTGAAACCCTAGTATGACTAAAAGTTAAATAGAAAGTAAAATATGTTGGAGGCCTAAATGATTTTTGGTCTACTTCTGGAAAACTAATGAAAAGTGGAATTCTCCTTACATTAACCACGTGTGAAATTTCGCATATGCCCCTTACAACCATTTGCCCGCCTGCCTTGTCTAGGTTATTCGATCCATGATGCACGCTAATTGAGTGTATCGAGTGTGCATTAATTTTTGTCAGGGAACGTGTAACGAGTGTATCGACTATCATCGGTTTCTCTACCCTTCTTCACACTCGTTCTCCCTTCCATCACAGATCGTGACACTAGTATTGTCAATTGTTGTTGTTCCCCGCCAGTTGCCTCCAGTCTTCGTTTCTGTAGTGGGTAAGGATTTTGTCTGTTTCTCTTGGTTGTTCTCGAATACCCACAATCTCTTTGGCTCAAGTTACTCATAATATTATGTTGTTATATTATTTTATTTTTTATTTTTTTTATTTTTTTGAAGATTTTAACATTCTTGCCAGCAAGGGTTAAGGTTTTTGGATTCAATAATTATTTTCAAGGTACCTCAAAGTACCTTGGATTATAACCACGGAATGGCTCTAGTTTAGTTGACGGAATAATGAGGAAATTTTTAGAGTTTATAAATATCTTCAGCAGTTTGTAAATATCAATGATGGATATTGATTGATAGACAGTGATATATGATAGTAGTTTAATATTTATATTTATAAATAAGTTGGTTCATTTTGCTATATTTGAAAACAACCCAAATAAAAACCTACTAAAAGAGGAATATCAAATTTGGAATGCAAGATTGATGGAAGAATTAAATAGGGGATATACTTTCTGTATTGAGAATATGTCTCACTTGAAAAGAAGAAAAAAACGCTTAAGTTTAGTGGCCTTAATAAAGAAAAGTACGAGGAAAAGAAAACTTTGGCTACTTTGAGAGATAAAGGAAATTTGTATGTTGAGACTTGAAATACACGATTATGGTTTGATGGTCTACAATTTGTTTTGTGTTTATGAGTCTTTGGATTCAGTGTGTAAAAAAAAAAAAAAGTCTTGTTACATTTTGGAACTTTTGACCTTGGTTTGTGTTGGTTGAAAGAAACTACGGATGACTTTGGTAGTAAAATTCCACTTTAGCATGTGAGCTTTCCAATGCAGGAGAACAATCACGCCAATGTTATGGAAGTTCATGGATTGTGTGAAATAAGAGTGGTACTAAAGGCACCCTTTGATTTCATAATCAAAAATGGAAAATTGGCTATGGAGATTCTGTATGATCAGAAATTTATACAGACACAAAATGGTTCGACTGGAAAGTTGTTTTGA ATGGGTGAGAGTGGTTGTTTGCCAACTCAATATGCCTACCACCTTGAGGACAAGAACGAATCTCTTGGAAAAGGAAGACTACTAAGAGAAGACTATTGGTTCGAGAATTATAGATTGGCAAAGGGAACGTGTAACGAGTGTATCGACTATCATCGGTTTCTCTACCCTTCTTCACACTCGTTCTCCCTTCCATCACAGATCGTGACACTAGTATTGTCAATTGTTGTTGTTCCCCGCCAGTTGCCTCCAGTCTTCGTTTCTGTAGTGGGTAAGGATTTTGAGAACAATCACGCCAATGTTATGGAAGTTCATGGATTGTGTGAAATAAGAGTGGTACTAAAGGCACCCTTTGATTTCATAATCAAAAATGGAAAATTGGCTATGGAGATTCTGTATGATCAGAAATTTATACAGACACAAAATGGTTCGACTGGAAAGTTGTTTTGA ATGGGTGAGAGTGGTTGTTTGCCAACTCAATATGCCTACCACCTTGAGGACAAGAACGAATCTCTTGGAAAAGGAAGACTACTAAGAGAAGACTATTGGTTCGAGAATTATAGATTGGCAAAGGGAACGTGTAACGAGTGTATCGACTATCATCGGTTTCTCTACCCTTCTTCACACTCGTTCTCCCTTCCATCACAGATCGTGACACTAGTATTGTCAATTGTTGTTGTTCCCCGCCAGTTGCCTCCAGTCTTCGTTTCTGTAGTGGGTAAGGATTTTGAGAACAATCACGCCAATGTTATGGAAGTTCATGGATTGTGTGAAATAAGAGTGGTACTAAAGGCACCCTTTGATTTCATAATCAAAAATGGAAAATTGGCTATGGAGATTCTGTATGATCAGAAATTTATACAGACACAAAATGGTTCGACTGGAAAGTTGTTTTGA MGESGCLPTQYAYHLEDKNESLGKGRLLREDYWFENYRLAKGTCNECIDYHRFLYPSSHSFSLPSQIVTLVLSIVVVPRQLPPVFVSVVGKDFENNHANVMEVHGLCEIRVVLKAPFDFIIKNGKLAMEILYDQKFIQTQNGSTGKLF Homology
BLAST of Cla97C02G034770 vs. NCBI nr
Match: YP_003587255.1 (ribosomal protein L5 [Citrullus lanatus] >ACV96646.1 ribosomal protein L5 [Citrullus lanatus]) HSP 1 Score: 91.3 bits (225), Expect = 7.7e-15 Identity = 45/53 (84.91%), Postives = 46/53 (86.79%), Query Frame = 0
BLAST of Cla97C02G034770 vs. NCBI nr
Match: BAO50881.1 (ribosomal protein L5 [Hevea brasiliensis] >BAO50929.1 ribosomal protein L5 [Hevea brasiliensis]) HSP 1 Score: 90.9 bits (224), Expect = 1.0e-14 Identity = 45/53 (84.91%), Postives = 46/53 (86.79%), Query Frame = 0
BLAST of Cla97C02G034770 vs. NCBI nr
Match: YP_004237272.1 (ribosomal protein L5 [Ricinus communis] >XP_015584167.1 uncharacterized protein LOC8267640 [Ricinus communis] >ADW96036.1 ribosomal protein L5 [Ricinus communis] >EEF27040.1 Mitochondrial 60S ribosomal protein L5, putative [Ricinus communis]) HSP 1 Score: 90.9 bits (224), Expect = 1.0e-14 Identity = 45/53 (84.91%), Postives = 46/53 (86.79%), Query Frame = 0
BLAST of Cla97C02G034770 vs. NCBI nr
Match: YP_003587347.1 (ribosomal protein L5 [Cucurbita pepo] >ACV96688.1 ribosomal protein L5 [Cucurbita pepo]) HSP 1 Score: 89.0 bits (219), Expect = 3.8e-14 Identity = 44/53 (83.02%), Postives = 45/53 (84.91%), Query Frame = 0
BLAST of Cla97C02G034770 vs. NCBI nr
Match: YP_007516856.1 (ribosomal protein subunit L5 [Glycine max] >YP_009532801.1 ribosomal protein L5 [Glycine soja] >QWX88244.1 ribosomal protein L5 [Robinia pseudoacacia] >QXE45615.1 ribosomal protein L5 [Pachyrhizus erosus] >AFR34300.1 ribosomal protein subunit L5 [Glycine max] >AYD72949.1 ribosomal protein L5 [Glycine soja]) HSP 1 Score: 88.6 bits (218), Expect = 5.0e-14 Identity = 44/53 (83.02%), Postives = 45/53 (84.91%), Query Frame = 0
BLAST of Cla97C02G034770 vs. ExPASy Swiss-Prot
Match: P42793 (60S ribosomal protein L5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPL5 PE=1 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 2.5e-16 Identity = 43/53 (81.13%), Postives = 46/53 (86.79%), Query Frame = 0
BLAST of Cla97C02G034770 vs. ExPASy Swiss-Prot
Match: Q05492 (60S ribosomal protein L5, mitochondrial OS=Oenothera berteroana OX=3950 GN=RPL5 PE=2 SV=2) HSP 1 Score: 78.6 bits (192), Expect = 6.7e-14 Identity = 41/55 (74.55%), Postives = 45/55 (81.82%), Query Frame = 0
BLAST of Cla97C02G034770 vs. ExPASy Swiss-Prot
Match: P49388 (60S ribosomal protein L5, mitochondrial OS=Brassica napus OX=3708 GN=RPL5 PE=3 SV=2) HSP 1 Score: 67.4 bits (163), Expect = 1.6e-10 Identity = 33/44 (75.00%), Postives = 35/44 (79.55%), Query Frame = 0
BLAST of Cla97C02G034770 vs. ExPASy Swiss-Prot
Match: P26860 (60S ribosomal protein L5, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPL5 PE=3 SV=2) HSP 1 Score: 60.8 bits (146), Expect = 1.5e-08 Identity = 35/54 (64.81%), Postives = 42/54 (77.78%), Query Frame = 0
BLAST of Cla97C02G034770 vs. ExPASy Swiss-Prot
Match: P51409 (60S ribosomal protein L5, mitochondrial OS=Solanum tuberosum OX=4113 GN=RPL5 PE=2 SV=2) HSP 1 Score: 50.8 bits (120), Expect = 1.5e-05 Identity = 34/54 (62.96%), Postives = 36/54 (66.67%), Query Frame = 0
BLAST of Cla97C02G034770 vs. ExPASy TrEMBL
Match: D5I3C5 (Ribosomal protein L5 OS=Citrullus lanatus OX=3654 GN=rpl5 PE=3 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 3.7e-15 Identity = 45/53 (84.91%), Postives = 46/53 (86.79%), Query Frame = 0
BLAST of Cla97C02G034770 vs. ExPASy TrEMBL
Match: W6JNB2 (Ribosomal protein L5 OS=Hevea brasiliensis OX=3981 GN=rpl5 PE=3 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 4.8e-15 Identity = 45/53 (84.91%), Postives = 46/53 (86.79%), Query Frame = 0
BLAST of Cla97C02G034770 vs. ExPASy TrEMBL
Match: B9TAS1 (Mitochondrial 60S ribosomal protein L5, putative OS=Ricinus communis OX=3988 GN=rpl5 PE=3 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 4.8e-15 Identity = 45/53 (84.91%), Postives = 46/53 (86.79%), Query Frame = 0
BLAST of Cla97C02G034770 vs. ExPASy TrEMBL
Match: D5I3H1 (Ribosomal protein L5 OS=Cucurbita pepo OX=3663 GN=rpl5 PE=3 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 1.8e-14 Identity = 44/53 (83.02%), Postives = 45/53 (84.91%), Query Frame = 0
BLAST of Cla97C02G034770 vs. ExPASy TrEMBL
Match: E9KZM3 (ribosomal protein L5 OS=Vigna radiata var. radiata OX=3916 GN=rpl5 PE=3 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 2.4e-14 Identity = 44/53 (83.02%), Postives = 45/53 (84.91%), Query Frame = 0
BLAST of Cla97C02G034770 vs. TAIR 10
Match: AT2G07725.1 (Ribosomal L5P family protein ) HSP 1 Score: 86.7 bits (213), Expect = 1.8e-17 Identity = 43/53 (81.13%), Postives = 45/53 (84.91%), Query Frame = 0
BLAST of Cla97C02G034770 vs. TAIR 10
Match: ATMG00210.1 (ribosomal protein L5 ) HSP 1 Score: 86.7 bits (213), Expect = 1.8e-17 Identity = 43/53 (81.13%), Postives = 45/53 (84.91%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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