Cla97C02G033890 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C02G033890
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	GATA type zinc finger transcription factor family protein
Location	Cla97Chr02: 7522582 .. 7524017 (+)
RNA-Seq Expression	Cla97C02G033890
Synteny	Cla97C02G033890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAGCTTTTCAGGAACCACACAAAAGTGCATGGCTTGTGACAAGACAGTTTATCTTGTAGATAAGCTGACTGCTGATAATAGGATTTTCCATAAGGCTTGTTTCCGATGCTACCATTGTAGGGGCACTCTTAAGGTATAAATAATATCCATATTTTATCCCTCTCTTCAAAAATAATAATAATAATAATCTTTTTGCTTTTTTTGTTTTTATGTTTGGAATTGGAATTGATTTCAGGGCGAGTATCACGAACATGCATTTGATGATGCCTGTTTGATGATAACAATCTCGTTTACAATTTCTTATTCTAGTAATAACTTCGAAACATGAAACCTGAAACTGTTAAGACGTTTTCAAAATAATACTTTGTTAAATAATTATTATTAGACCAAACTTGATTAATTTAACCGTCTATTTTTTGTATTTTCAACTAAGATAATACTAATTATTATTATTTATTTATTCTTTTTTTTTTTTTTGGTTTTGCAGCTTAGCAACTATTGTTCCTTTGAGGGAGTGCTTTACTGCAGGCCTCACTATGATCAACTCTTCAAGAGAACTGGCAGCCTTGACAAGAGTTTTGAAGGCAATTATTATTATTATTATTATTATTATTATTTACTATGTTAATTACAAATCACAACTCTATAATTTTCCTATTTTGCAAAACCATACCCTCCTATTTTTCAAAATTATTCAAACACCCACATTGTCCAAAATCCATACCCTTAAATTTTACAAGGAGTACACTTGCAAAATAGGACATGATTTACAAAATTCATTAAAAAAAAAAAATTCCCAAAATAATTCTAAAATTGAATATTTTCTTTTCTCCAGGAACTCCAAAAGTCATGAAAGCAGAAAAGCCCACCGAAAATGAGGTATTACCCATTTGAAAAACCAAATTATTATCCAACAGGGAGCTCAATTTCATTTTTTTTTTTTTTGACTATTTACTAATGATTTATATTGGAATTTGCAATTGAATAGAATGTAAAGTCAGTCTCCAACATGTTTGCTGGCACCAGAGACAAATGTTCAGGCTGTACCAAGACTGTTTATCCCATTGAAAAGGTACTAATTGCAATCAAAATATGAAAAAAAAAAAAAAAAAAAACTAATTAATCATCTATTAAAATTTTTGTAATTACTTCGTTTTGGAGCATAATAATAAAGTTTATACTATCGATTCTAAGGTTACGGTGAACGGGACGCCATACCACAAAAGCTGCTTCAAATGTAGCCATGGAGGATGCACAATAAGCCCATCAAATTACATAGCACATGAGGGAAAACTATATTGCAAACATCATCACATTCAACTATTCAAGGAGAAGGGAAATTACAGCCAACTTGAAACTGAGCGACAAAAGAACAATTCATCAGTGGCAATGAAATTAACCACTCCAATGGAAATTGCAGCTGAATCATAG

mRNA sequence

ATGGCTAGCTTTTCAGGAACCACACAAAAGTGCATGGCTTGTGACAAGACAGTTTATCTTGTAGATAAGCTGACTGCTGATAATAGGATTTTCCATAAGGCTTGTTTCCGATGCTACCATTGTAGGGGCACTCTTAAGCTTAGCAACTATTGTTCCTTTGAGGGAGTGCTTTACTGCAGGCCTCACTATGATCAACTCTTCAAGAGAACTGGCAGCCTTGACAAGAGAACTCCAAAAGTCATGAAAGCAGAAAAGCCCACCGAAAATGAGAATGTAAAGTCAGTCTCCAACATGTTTGCTGGCACCAGAGACAAATGTTCAGGCTGTACCAAGACTGTTTATCCCATTGAAAAGCATAATAATAAAGTTTATACTATCGATTCTAAGGTTACGGTGAACGGGACGCCATACCACAAAAGCTGCTTCAAATGTAGCCATGGAGGATGCACAATAAGCCCATCAAATTACATAGCACATGAGGGAAAACTATATTGCAAACATCATCACATTCAACTATTCAAGGAGAAGGGAAATTACAGCCAACTTGAAACTGAGCGACAAAAGAACAATTCATCAGTGGCAATGAAATTAACCACTCCAATGGAAATTGCAGCTGAATCATAG

Coding sequence (CDS)

ATGGCTAGCTTTTCAGGAACCACACAAAAGTGCATGGCTTGTGACAAGACAGTTTATCTTGTAGATAAGCTGACTGCTGATAATAGGATTTTCCATAAGGCTTGTTTCCGATGCTACCATTGTAGGGGCACTCTTAAGCTTAGCAACTATTGTTCCTTTGAGGGAGTGCTTTACTGCAGGCCTCACTATGATCAACTCTTCAAGAGAACTGGCAGCCTTGACAAGAGAACTCCAAAAGTCATGAAAGCAGAAAAGCCCACCGAAAATGAGAATGTAAAGTCAGTCTCCAACATGTTTGCTGGCACCAGAGACAAATGTTCAGGCTGTACCAAGACTGTTTATCCCATTGAAAAGCATAATAATAAAGTTTATACTATCGATTCTAAGGTTACGGTGAACGGGACGCCATACCACAAAAGCTGCTTCAAATGTAGCCATGGAGGATGCACAATAAGCCCATCAAATTACATAGCACATGAGGGAAAACTATATTGCAAACATCATCACATTCAACTATTCAAGGAGAAGGGAAATTACAGCCAACTTGAAACTGAGCGACAAAAGAACAATTCATCAGTGGCAATGAAATTAACCACTCCAATGGAAATTGCAGCTGAATCATAG

Protein sequence

MASFSGTTQKCMACDKTVYLVDKLTADNRIFHKACFRCYHCRGTLKLSNYCSFEGVLYCRPHYDQLFKRTGSLDKRTPKVMKAEKPTENENVKSVSNMFAGTRDKCSGCTKTVYPIEKHNNKVYTIDSKVTVNGTPYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQKNNSSVAMKLTTPMEIAAES

Homology

[Close]

BLAST of Cla97C02G033890 vs. NCBI nr
Match: XP_038888760.1 (LIM domain-containing protein WLIM1-like [Benincasa hispida])

HSP 1 Score: 377.1 bits (967), Expect = 9.8e-101
Identity = 184/211 (87.20%), Postives = 191/211 (90.52%), Query Frame = 0


Query: 1   MASFSGTTQKCMACDKTVYLVDKLTADNRIFHKACFRCYHCRGTLKLSNYCSFEGVLYCR 60
           MASF+GTTQKCMACDKTVYLVDKLTADNR+FHKACFRCYHC+GTLKLSNYCSFEGVLYCR
Sbjct: 1   MASFAGTTQKCMACDKTVYLVDKLTADNRVFHKACFRCYHCKGTLKLSNYCSFEGVLYCR 60

Query: 61  PHYDQLFKRTGSLDKR---TPKVMKAEKPTENENVKSVSNMFAGTRDKCSGCTKTVYPIE 120
           PHYDQLFKRTGSLDK    TPKV+K +KPTENEN KSVSNMFAGTRDKCSGCTKTVYPIE
Sbjct: 61  PHYDQLFKRTGSLDKSFEGTPKVVKLDKPTENENAKSVSNMFAGTRDKCSGCTKTVYPIE 120

Query: 121 KHNNKVYTIDSKVTVNGTPYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKG 180
                      KVTVNGT YHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKG
Sbjct: 121 -----------KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKG 180

Query: 181 NYSQLETERQK-NNSSVAMKLTTPMEIAAES 208
           NYSQLETERQK NN+SVAM LT+PMEIAAES
Sbjct: 181 NYSQLETERQKNNNASVAMTLTSPMEIAAES 200

[Close]

BLAST of Cla97C02G033890 vs. NCBI nr
Match: KAA0031371.1 (LIM domain protein GLIM1a [Cucumis melo var. makuwa] >TYK06823.1 LIM domain protein GLIM1a [Cucumis melo var. makuwa])

HSP 1 Score: 375.6 bits (963), Expect = 2.8e-100
Identity = 183/212 (86.32%), Postives = 190/212 (89.62%), Query Frame = 0


Query: 1   MASFSGTTQKCMACDKTVYLVDKLTADNRIFHKACFRCYHCRGTLKLSNYCSFEGVLYCR 60
           MASF+GTTQKCMAC+KTVYLVDKLTADNR+FHK CFRCYHCRGTLKLSNYCSFEGVLYCR
Sbjct: 1   MASFAGTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCR 60

Query: 61  PHYDQLFKRTGSLDKR---TPKVMKAEKPTENENVKSVSNMFAGTRDKCSGCTKTVYPIE 120
           PHYDQLFKRTGSLDK    TPK+MK EKP+ENEN KSVSNMF GTRDKCSGCTKTVYPIE
Sbjct: 61  PHYDQLFKRTGSLDKSFEGTPKLMKPEKPSENENAKSVSNMFGGTRDKCSGCTKTVYPIE 120

Query: 121 KHNNKVYTIDSKVTVNGTPYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKG 180
                      KVTVNGT YHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKG
Sbjct: 121 -----------KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKG 180

Query: 181 NYSQLETERQKNNSSV--AMKLTTPMEIAAES 208
           NYSQLETERQKNNS+V  A+KLTTPMEIAAES
Sbjct: 181 NYSQLETERQKNNSAVAAAIKLTTPMEIAAES 201

[Close]

BLAST of Cla97C02G033890 vs. NCBI nr
Match: XP_004136935.1 (LIM domain-containing protein WLIM1 [Cucumis sativus] >KGN43845.1 hypothetical protein Csa_017260 [Cucumis sativus])

HSP 1 Score: 367.5 bits (942), Expect = 7.7e-98
Identity = 179/212 (84.43%), Postives = 189/212 (89.15%), Query Frame = 0


Query: 1   MASFSGTTQKCMACDKTVYLVDKLTADNRIFHKACFRCYHCRGTLKLSNYCSFEGVLYCR 60
           MASFSGTTQKCMAC+KTVYLVDKLTADNR+FHKACFRCYHC+GTLKLSNYCSFEGVLYCR
Sbjct: 1   MASFSGTTQKCMACEKTVYLVDKLTADNRVFHKACFRCYHCKGTLKLSNYCSFEGVLYCR 60

Query: 61  PHYDQLFKRTGSLDKR---TPKVMKAEKPTENENVKSVSNMFAGTRDKCSGCTKTVYPIE 120
           PHYDQLFKRTGSLDK    TPKVM++EKP+ENEN KSVSNMF GTRDKCSGCTKTVY IE
Sbjct: 61  PHYDQLFKRTGSLDKSFEGTPKVMRSEKPSENENAKSVSNMFGGTRDKCSGCTKTVYLIE 120

Query: 121 KHNNKVYTIDSKVTVNGTPYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKG 180
                      KVTVNG  YHKSCFKCSHGGCTISPS+YIAHEGKLYCKHHHIQLF EKG
Sbjct: 121 -----------KVTVNGNAYHKSCFKCSHGGCTISPSSYIAHEGKLYCKHHHIQLFMEKG 180

Query: 181 NYSQLETERQKNNSSV--AMKLTTPMEIAAES 208
           NYSQLETERQKNNS++  A+KLTTPMEIAAES
Sbjct: 181 NYSQLETERQKNNSAIAAAIKLTTPMEIAAES 201

[Close]

BLAST of Cla97C02G033890 vs. NCBI nr
Match: XP_022988956.1 (LIM domain-containing protein WLIM1-like [Cucurbita maxima])

HSP 1 Score: 360.1 bits (923), Expect = 1.2e-95
Identity = 174/210 (82.86%), Postives = 185/210 (88.10%), Query Frame = 0


Query: 1   MASFSGTTQKCMACDKTVYLVDKLTADNRIFHKACFRCYHCRGTLKLSNYCSFEGVLYCR 60
           MASFSGTTQKCMACDKTVYLVDKLTADNR+FHKACFRCYHC+GTLKLSNYCSFEGVLYCR
Sbjct: 1   MASFSGTTQKCMACDKTVYLVDKLTADNRVFHKACFRCYHCKGTLKLSNYCSFEGVLYCR 60

Query: 61  PHYDQLFKRTGSLDKR---TPKVMKAEKPTENENVKSVSNMFAGTRDKCSGCTKTVYPIE 120
           PHYDQLFKRTGSLDK    TPK++K EKPT+NE   + SN+FAGTRDKC+GCTKTVYP+E
Sbjct: 61  PHYDQLFKRTGSLDKSFEGTPKIVKIEKPTDNEKANAKSNLFAGTRDKCAGCTKTVYPLE 120

Query: 121 KHNNKVYTIDSKVTVNGTPYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKG 180
                      KVTVNGT YHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKG
Sbjct: 121 -----------KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKG 180

Query: 181 NYSQLETERQKNNSSVAMKLTTPMEIAAES 208
           NYSQLETERQK+N SVAMKL   +EIAAES
Sbjct: 181 NYSQLETERQKSN-SVAMKLGASLEIAAES 198

[Close]

BLAST of Cla97C02G033890 vs. NCBI nr
Match: XP_022148729.1 (LIM domain-containing protein WLIM1-like [Momordica charantia])

HSP 1 Score: 359.4 bits (921), Expect = 2.1e-95
Identity = 177/210 (84.29%), Postives = 185/210 (88.10%), Query Frame = 0


Query: 1   MASFSGTTQKCMACDKTVYLVDKLTADNRIFHKACFRCYHCRGTLKLSNYCSFEGVLYCR 60
           MASFSGTTQKCMAC+KTVYLVDKLTADNR+FHKACFRCYHC+GTLKLSNYCSFEGVLYCR
Sbjct: 1   MASFSGTTQKCMACEKTVYLVDKLTADNRVFHKACFRCYHCKGTLKLSNYCSFEGVLYCR 60

Query: 61  PHYDQLFKRTGSLDKR---TPKVMKAEKPTENENVKSVSNMFAGTRDKCSGCTKTVYPIE 120
           PHYDQLFKRTGSLDK    TPKV K EKPTE EN KSVSNMF GTRDKCSGCTKTVYPIE
Sbjct: 61  PHYDQLFKRTGSLDKSFEGTPKV-KPEKPTETENAKSVSNMFGGTRDKCSGCTKTVYPIE 120

Query: 121 KHNNKVYTIDSKVTVNGTPYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKG 180
                      KVTVNGT YHK+CFKC+HGGCTISPSNYIAHEGKLYCKHHHIQLF EKG
Sbjct: 121 -----------KVTVNGTAYHKTCFKCTHGGCTISPSNYIAHEGKLYCKHHHIQLFMEKG 180

Query: 181 NYSQLETERQKNNSSVAMKLTTPMEIAAES 208
           NYSQLETERQKN  SV+M LT+P+EIAAES
Sbjct: 181 NYSQLETERQKN--SVSMNLTSPVEIAAES 196

[Close]

BLAST of Cla97C02G033890 vs. ExPASy Swiss-Prot
Match: Q94JX5 (LIM domain-containing protein WLIM1 OS=Arabidopsis thaliana OX=3702 GN=WLIM1 PE=1 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 1.6e-77
Identity = 139/186 (74.73%), Postives = 153/186 (82.26%), Query Frame = 0


Query: 3   SFSGTTQKCMACDKTVYLVDKLTADNRIFHKACFRCYHCRGTLKLSNYCSFEGVLYCRPH 62
           +F+GTTQKCMACDKTVYLVDKLTADNR++HKACFRC+HC+GTLKLSNY SFEGVLYCRPH
Sbjct: 2   AFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRPH 61

Query: 63  YDQLFKRTGSLDKR---TPKVMKAEKPTENENV--KSVSNMFAGTRDKCSGCTKTVYPIE 122
           +DQ FKRTGSL+K    TPK+ K ++P E E      VSNMF GTR+KC GC KTVYPIE
Sbjct: 62  FDQNFKRTGSLEKSFEGTPKIGKPDRPLEGERPAGTKVSNMFGGTREKCVGCDKTVYPIE 121

Query: 123 KHNNKVYTIDSKVTVNGTPYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKG 182
                      KV+VNGT YHKSCFKC+HGGCTISPSNYIAHEGKLYCKHHHIQL KEKG
Sbjct: 122 -----------KVSVNGTLYHKSCFKCTHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKG 176

Query: 183 NYSQLE 184
           N SQLE
Sbjct: 182 NLSQLE 176

[Close]

BLAST of Cla97C02G033890 vs. ExPASy Swiss-Prot
Match: P29675 (Pollen-specific protein SF3 OS=Helianthus annuus OX=4232 GN=SF3 PE=2 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 6.6e-68
Identity = 123/190 (64.74%), Postives = 146/190 (76.84%), Query Frame = 0


Query: 1   MASFSGTTQKCMACDKTVYLVDKLTADNRIFHKACFRCYHCRGTLKLSNYCSFEGVLYCR 60
           M SF+GTTQKC  C+KTVYLVDKL A+ R++HKACFRC+HC  TLKLSN+ SF+GV+YCR
Sbjct: 1   MKSFTGTTQKCTVCEKTVYLVDKLVANQRVYHKACFRCHHCNSTLKLSNFNSFDGVVYCR 60

Query: 61  PHYDQLFKRTGSLDKR---TPKVMKAEK--PTENENVKSVSNMFAGTRDKCSGCTKTVYP 120
            H+DQLFKRTGSL+K    TPK  K E+    E ++   +S+ F GTRDKC+ C K VYP
Sbjct: 61  HHFDQLFKRTGSLEKSFDGTPK-FKPERTFSQETQSANRLSSFFEGTRDKCNACAKIVYP 120

Query: 121 IEKHNNKVYTIDSKVTVNGTPYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKE 180
           IE           +V V+GT YH++CFKC HGGCTISPSNYIAHEG+LYCKHHHIQLFK+
Sbjct: 121 IE-----------RVKVDGTAYHRACFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLFKK 178

Query: 181 KGNYSQLETE 186
           KGNYSQLE E
Sbjct: 181 KGNYSQLEVE 178

[Close]

BLAST of Cla97C02G033890 vs. ExPASy Swiss-Prot
Match: O04193 (LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A PE=1 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 6.9e-57
Identity = 108/184 (58.70%), Postives = 130/184 (70.65%), Query Frame = 0


Query: 3   SFSGTTQKCMACDKTVYLVDKLTADNRIFHKACFRCYHCRGTLKLSNYCSFEGVLYCRPH 62
           SF+GT QKC AC+KTVY V+ L+AD   +HKACF+C HC+  L+LSNY S EGV+YCRPH
Sbjct: 2   SFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRPH 61

Query: 63  YDQLFKRTGSLDK--RTPKVMKAEKPTE--NENVKSVSNMFAGTRDKCSGCTKTVYPIEK 122
           ++QLFK +GS  K  ++P     +KPT   N     ++ MF+GT+DKC+ CTKTVYPIE 
Sbjct: 62  FEQLFKESGSFSKNFQSPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPIE- 121

Query: 123 HNNKVYTIDSKVTVNGTPYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGN 182
                     KVTV    YHKSCFKCSHGGC ISPSNY A EG LYCKHH  QLFKEKG+
Sbjct: 122 ----------KVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGS 174

[Close]

BLAST of Cla97C02G033890 vs. ExPASy Swiss-Prot
Match: Q9M047 (LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B PE=1 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 9.3e-54
Identity = 106/209 (50.72%), Postives = 139/209 (66.51%), Query Frame = 0


Query: 3   SFSGTTQKCMACDKTVYLVDKLTADNRIFHKACFRCYHCRGTLKLSNYCSFEGVLYCRPH 62
           SF+GT QKC AC+KTVY V+ L+AD   +HK+CF+C HC+  L+LS+Y S EGVLYC+PH
Sbjct: 2   SFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKPH 61

Query: 63  YDQLFKRTGSLDKRTPKVMKAEKPTENENVKS---VSNMFAGTRDKCSGCTKTVYPIEKH 122
           ++QLFK +GS +K      K+   +  E  ++   V+  F+GT++KC+ C+KTVYPIE  
Sbjct: 62  FEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIE-- 121

Query: 123 NNKVYTIDSKVTVNGTPYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNY 182
                    KVTV    YHKSCFKCSHGGC ISPSNY A EG LYCKHH  QLFKEKG+Y
Sbjct: 122 ---------KVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSY 181

Query: 183 SQL-ETERQKNNSSVAMKLTTPMEIAAES 208
           + L ++   K +++ A+    P     ES
Sbjct: 182 NHLIKSASIKRSAAAAVAAGVPAASVPES 199

[Close]

BLAST of Cla97C02G033890 vs. ExPASy Swiss-Prot
Match: Q1ECF5 (LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana OX=3702 GN=PLIM2B PE=1 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.4e-49
Identity = 87/180 (48.33%), Postives = 123/180 (68.33%), Query Frame = 0


Query: 3   SFSGTTQKCMACDKTVYLVDKLTADNRIFHKACFRCYHCRGTLKLSNYCSFEGVLYCRPH 62
           SF+GT  KC  CDKTVY+VD L+ +   +HK+CFRC HC+GTL++SNY S +GVLYC+ H
Sbjct: 2   SFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKTH 61

Query: 63  YDQLFKRTGSLDKRTPKVMKAEKPTENENVKSVSNMFAGTRDKCSGCTKTVYPIEKHNNK 122
           ++QLFK +G+  K   +  K EKP        +S++F GT+DKC+ C KTVYP+E     
Sbjct: 62  FEQLFKESGNFSKNF-QPGKTEKPELTRTPSKISSIFCGTQDKCAACEKTVYPLE----- 121

Query: 123 VYTIDSKVTVNGTPYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQL 182
                 K+ + G  +HK+CF+C+HGGCT++ S+Y + +  LYC+HH  QLF EKGNY+ +
Sbjct: 122 ------KIQMEGECFHKTCFRCAHGGCTLTHSSYASLDSVLYCRHHFNQLFMEKGNYAHV 169

[Close]

BLAST of Cla97C02G033890 vs. ExPASy TrEMBL
Match: A0A5A7SP97 (LIM domain protein GLIM1a OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001270 PE=4 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 1.4e-100
Identity = 183/212 (86.32%), Postives = 190/212 (89.62%), Query Frame = 0


Query: 1   MASFSGTTQKCMACDKTVYLVDKLTADNRIFHKACFRCYHCRGTLKLSNYCSFEGVLYCR 60
           MASF+GTTQKCMAC+KTVYLVDKLTADNR+FHK CFRCYHCRGTLKLSNYCSFEGVLYCR
Sbjct: 1   MASFAGTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCR 60

Query: 61  PHYDQLFKRTGSLDKR---TPKVMKAEKPTENENVKSVSNMFAGTRDKCSGCTKTVYPIE 120
           PHYDQLFKRTGSLDK    TPK+MK EKP+ENEN KSVSNMF GTRDKCSGCTKTVYPIE
Sbjct: 61  PHYDQLFKRTGSLDKSFEGTPKLMKPEKPSENENAKSVSNMFGGTRDKCSGCTKTVYPIE 120

Query: 121 KHNNKVYTIDSKVTVNGTPYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKG 180
                      KVTVNGT YHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKG
Sbjct: 121 -----------KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKG 180

Query: 181 NYSQLETERQKNNSSV--AMKLTTPMEIAAES 208
           NYSQLETERQKNNS+V  A+KLTTPMEIAAES
Sbjct: 181 NYSQLETERQKNNSAVAAAIKLTTPMEIAAES 201

[Close]

BLAST of Cla97C02G033890 vs. ExPASy TrEMBL
Match: A0A0A0K2E5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071340 PE=4 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 3.8e-98
Identity = 179/212 (84.43%), Postives = 189/212 (89.15%), Query Frame = 0


Query: 1   MASFSGTTQKCMACDKTVYLVDKLTADNRIFHKACFRCYHCRGTLKLSNYCSFEGVLYCR 60
           MASFSGTTQKCMAC+KTVYLVDKLTADNR+FHKACFRCYHC+GTLKLSNYCSFEGVLYCR
Sbjct: 1   MASFSGTTQKCMACEKTVYLVDKLTADNRVFHKACFRCYHCKGTLKLSNYCSFEGVLYCR 60

Query: 61  PHYDQLFKRTGSLDKR---TPKVMKAEKPTENENVKSVSNMFAGTRDKCSGCTKTVYPIE 120
           PHYDQLFKRTGSLDK    TPKVM++EKP+ENEN KSVSNMF GTRDKCSGCTKTVY IE
Sbjct: 61  PHYDQLFKRTGSLDKSFEGTPKVMRSEKPSENENAKSVSNMFGGTRDKCSGCTKTVYLIE 120

Query: 121 KHNNKVYTIDSKVTVNGTPYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKG 180
                      KVTVNG  YHKSCFKCSHGGCTISPS+YIAHEGKLYCKHHHIQLF EKG
Sbjct: 121 -----------KVTVNGNAYHKSCFKCSHGGCTISPSSYIAHEGKLYCKHHHIQLFMEKG 180

Query: 181 NYSQLETERQKNNSSV--AMKLTTPMEIAAES 208
           NYSQLETERQKNNS++  A+KLTTPMEIAAES
Sbjct: 181 NYSQLETERQKNNSAIAAAIKLTTPMEIAAES 201

[Close]

BLAST of Cla97C02G033890 vs. ExPASy TrEMBL
Match: A0A6J1JIN6 (LIM domain-containing protein WLIM1-like OS=Cucurbita maxima OX=3661 GN=LOC111486161 PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 6.0e-96
Identity = 174/210 (82.86%), Postives = 185/210 (88.10%), Query Frame = 0


Query: 1   MASFSGTTQKCMACDKTVYLVDKLTADNRIFHKACFRCYHCRGTLKLSNYCSFEGVLYCR 60
           MASFSGTTQKCMACDKTVYLVDKLTADNR+FHKACFRCYHC+GTLKLSNYCSFEGVLYCR
Sbjct: 1   MASFSGTTQKCMACDKTVYLVDKLTADNRVFHKACFRCYHCKGTLKLSNYCSFEGVLYCR 60

Query: 61  PHYDQLFKRTGSLDKR---TPKVMKAEKPTENENVKSVSNMFAGTRDKCSGCTKTVYPIE 120
           PHYDQLFKRTGSLDK    TPK++K EKPT+NE   + SN+FAGTRDKC+GCTKTVYP+E
Sbjct: 61  PHYDQLFKRTGSLDKSFEGTPKIVKIEKPTDNEKANAKSNLFAGTRDKCAGCTKTVYPLE 120

Query: 121 KHNNKVYTIDSKVTVNGTPYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKG 180
                      KVTVNGT YHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKG
Sbjct: 121 -----------KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKG 180

Query: 181 NYSQLETERQKNNSSVAMKLTTPMEIAAES 208
           NYSQLETERQK+N SVAMKL   +EIAAES
Sbjct: 181 NYSQLETERQKSN-SVAMKLGASLEIAAES 198

[Close]

BLAST of Cla97C02G033890 vs. ExPASy TrEMBL
Match: A0A6J1D4V0 (LIM domain-containing protein WLIM1-like OS=Momordica charantia OX=3673 GN=LOC111017319 PE=4 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 1.0e-95
Identity = 177/210 (84.29%), Postives = 185/210 (88.10%), Query Frame = 0


Query: 1   MASFSGTTQKCMACDKTVYLVDKLTADNRIFHKACFRCYHCRGTLKLSNYCSFEGVLYCR 60
           MASFSGTTQKCMAC+KTVYLVDKLTADNR+FHKACFRCYHC+GTLKLSNYCSFEGVLYCR
Sbjct: 1   MASFSGTTQKCMACEKTVYLVDKLTADNRVFHKACFRCYHCKGTLKLSNYCSFEGVLYCR 60

Query: 61  PHYDQLFKRTGSLDKR---TPKVMKAEKPTENENVKSVSNMFAGTRDKCSGCTKTVYPIE 120
           PHYDQLFKRTGSLDK    TPKV K EKPTE EN KSVSNMF GTRDKCSGCTKTVYPIE
Sbjct: 61  PHYDQLFKRTGSLDKSFEGTPKV-KPEKPTETENAKSVSNMFGGTRDKCSGCTKTVYPIE 120

Query: 121 KHNNKVYTIDSKVTVNGTPYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKG 180
                      KVTVNGT YHK+CFKC+HGGCTISPSNYIAHEGKLYCKHHHIQLF EKG
Sbjct: 121 -----------KVTVNGTAYHKTCFKCTHGGCTISPSNYIAHEGKLYCKHHHIQLFMEKG 180

Query: 181 NYSQLETERQKNNSSVAMKLTTPMEIAAES 208
           NYSQLETERQKN  SV+M LT+P+EIAAES
Sbjct: 181 NYSQLETERQKN--SVSMNLTSPVEIAAES 196

[Close]

BLAST of Cla97C02G033890 vs. ExPASy TrEMBL
Match: A0A6J1EIM6 (LIM domain-containing protein WLIM1-like OS=Cucurbita moschata OX=3662 GN=LOC111434484 PE=4 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 1.0e-95
Identity = 173/210 (82.38%), Postives = 185/210 (88.10%), Query Frame = 0


Query: 1   MASFSGTTQKCMACDKTVYLVDKLTADNRIFHKACFRCYHCRGTLKLSNYCSFEGVLYCR 60
           MASFSGTTQKCMACDKTVYLVDKLTADNR+FHKACFRCYHC+GTLKLSNYCSFEGVLYCR
Sbjct: 1   MASFSGTTQKCMACDKTVYLVDKLTADNRVFHKACFRCYHCKGTLKLSNYCSFEGVLYCR 60

Query: 61  PHYDQLFKRTGSLDKR---TPKVMKAEKPTENENVKSVSNMFAGTRDKCSGCTKTVYPIE 120
           PHYDQLFKRTGSLDK    TPK++K EKPT+NE   + SN+FAGTRDKC+GCTKTVYP+E
Sbjct: 61  PHYDQLFKRTGSLDKSFEGTPKIVKVEKPTDNEKANAKSNLFAGTRDKCAGCTKTVYPLE 120

Query: 121 KHNNKVYTIDSKVTVNGTPYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKG 180
                      KVTVNGT YHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKG
Sbjct: 121 -----------KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKG 180

Query: 181 NYSQLETERQKNNSSVAMKLTTPMEIAAES 208
           NYSQLETERQK+N +VAMKL   +EIAAES
Sbjct: 181 NYSQLETERQKSN-AVAMKLGASLEIAAES 198

[Close]

BLAST of Cla97C02G033890 vs. TAIR 10
Match: AT1G10200.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 290.4 bits (742), Expect = 1.1e-78
Identity = 139/186 (74.73%), Postives = 153/186 (82.26%), Query Frame = 0


Query: 3   SFSGTTQKCMACDKTVYLVDKLTADNRIFHKACFRCYHCRGTLKLSNYCSFEGVLYCRPH 62
           +F+GTTQKCMACDKTVYLVDKLTADNR++HKACFRC+HC+GTLKLSNY SFEGVLYCRPH
Sbjct: 2   AFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRPH 61

Query: 63  YDQLFKRTGSLDKR---TPKVMKAEKPTENENV--KSVSNMFAGTRDKCSGCTKTVYPIE 122
           +DQ FKRTGSL+K    TPK+ K ++P E E      VSNMF GTR+KC GC KTVYPIE
Sbjct: 62  FDQNFKRTGSLEKSFEGTPKIGKPDRPLEGERPAGTKVSNMFGGTREKCVGCDKTVYPIE 121

Query: 123 KHNNKVYTIDSKVTVNGTPYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKG 182
                      KV+VNGT YHKSCFKC+HGGCTISPSNYIAHEGKLYCKHHHIQL KEKG
Sbjct: 122 -----------KVSVNGTLYHKSCFKCTHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKG 176

Query: 183 NYSQLE 184
           N SQLE
Sbjct: 182 NLSQLE 176

[Close]

BLAST of Cla97C02G033890 vs. TAIR 10
Match: AT2G39900.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 221.9 bits (564), Expect = 4.9e-58
Identity = 108/184 (58.70%), Postives = 130/184 (70.65%), Query Frame = 0


Query: 3   SFSGTTQKCMACDKTVYLVDKLTADNRIFHKACFRCYHCRGTLKLSNYCSFEGVLYCRPH 62
           SF+GT QKC AC+KTVY V+ L+AD   +HKACF+C HC+  L+LSNY S EGV+YCRPH
Sbjct: 2   SFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRPH 61

Query: 63  YDQLFKRTGSLDK--RTPKVMKAEKPTE--NENVKSVSNMFAGTRDKCSGCTKTVYPIEK 122
           ++QLFK +GS  K  ++P     +KPT   N     ++ MF+GT+DKC+ CTKTVYPIE 
Sbjct: 62  FEQLFKESGSFSKNFQSPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPIE- 121

Query: 123 HNNKVYTIDSKVTVNGTPYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGN 182
                     KVTV    YHKSCFKCSHGGC ISPSNY A EG LYCKHH  QLFKEKG+
Sbjct: 122 ----------KVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGS 174

[Close]

BLAST of Cla97C02G033890 vs. TAIR 10
Match: AT3G55770.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 211.5 bits (537), Expect = 6.6e-55
Identity = 106/209 (50.72%), Postives = 139/209 (66.51%), Query Frame = 0


Query: 3   SFSGTTQKCMACDKTVYLVDKLTADNRIFHKACFRCYHCRGTLKLSNYCSFEGVLYCRPH 62
           SF+GT QKC AC+KTVY V+ L+AD   +HK+CF+C HC+  L+LS+Y S EGVLYC+PH
Sbjct: 2   SFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKPH 61

Query: 63  YDQLFKRTGSLDKRTPKVMKAEKPTENENVKS---VSNMFAGTRDKCSGCTKTVYPIEKH 122
           ++QLFK +GS +K      K+   +  E  ++   V+  F+GT++KC+ C+KTVYPIE  
Sbjct: 62  FEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIE-- 121

Query: 123 NNKVYTIDSKVTVNGTPYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNY 182
                    KVTV    YHKSCFKCSHGGC ISPSNY A EG LYCKHH  QLFKEKG+Y
Sbjct: 122 ---------KVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSY 181

Query: 183 SQL-ETERQKNNSSVAMKLTTPMEIAAES 208
           + L ++   K +++ A+    P     ES
Sbjct: 182 NHLIKSASIKRSAAAAVAAGVPAASVPES 199

[Close]

BLAST of Cla97C02G033890 vs. TAIR 10
Match: AT3G55770.2 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 211.5 bits (537), Expect = 6.6e-55
Identity = 106/209 (50.72%), Postives = 139/209 (66.51%), Query Frame = 0


Query: 3   SFSGTTQKCMACDKTVYLVDKLTADNRIFHKACFRCYHCRGTLKLSNYCSFEGVLYCRPH 62
           SF+GT QKC AC+KTVY V+ L+AD   +HK+CF+C HC+  L+LS+Y S EGVLYC+PH
Sbjct: 2   SFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKPH 61

Query: 63  YDQLFKRTGSLDKRTPKVMKAEKPTENENVKS---VSNMFAGTRDKCSGCTKTVYPIEKH 122
           ++QLFK +GS +K      K+   +  E  ++   V+  F+GT++KC+ C+KTVYPIE  
Sbjct: 62  FEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIE-- 121

Query: 123 NNKVYTIDSKVTVNGTPYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNY 182
                    KVTV    YHKSCFKCSHGGC ISPSNY A EG LYCKHH  QLFKEKG+Y
Sbjct: 122 ---------KVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSY 181

Query: 183 SQL-ETERQKNNSSVAMKLTTPMEIAAES 208
           + L ++   K +++ A+    P     ES
Sbjct: 182 NHLIKSASIKRSAAAAVAAGVPAASVPES 199

[Close]

BLAST of Cla97C02G033890 vs. TAIR 10
Match: AT3G55770.3 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 211.5 bits (537), Expect = 6.6e-55
Identity = 106/209 (50.72%), Postives = 139/209 (66.51%), Query Frame = 0


Query: 3   SFSGTTQKCMACDKTVYLVDKLTADNRIFHKACFRCYHCRGTLKLSNYCSFEGVLYCRPH 62
           SF+GT QKC AC+KTVY V+ L+AD   +HK+CF+C HC+  L+LS+Y S EGVLYC+PH
Sbjct: 2   SFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKPH 61

Query: 63  YDQLFKRTGSLDKRTPKVMKAEKPTENENVKS---VSNMFAGTRDKCSGCTKTVYPIEKH 122
           ++QLFK +GS +K      K+   +  E  ++   V+  F+GT++KC+ C+KTVYPIE  
Sbjct: 62  FEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIE-- 121

Query: 123 NNKVYTIDSKVTVNGTPYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNY 182
                    KVTV    YHKSCFKCSHGGC ISPSNY A EG LYCKHH  QLFKEKG+Y
Sbjct: 122 ---------KVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSY 181

Query: 183 SQL-ETERQKNNSSVAMKLTTPMEIAAES 208
           + L ++   K +++ A+    P     ES
Sbjct: 182 NHLIKSASIKRSAAAAVAAGVPAASVPES 199

The following BLAST results are available for this feature:

BLAST of Cla97C02G033890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888760.1	9.8e-101	87.20	LIM domain-containing protein WLIM1-like [Benincasa hispida]	[more]
KAA0031371.1	2.8e-100	86.32	LIM domain protein GLIM1a [Cucumis melo var. makuwa] >TYK06823.1 LIM domain prot...	[more]
XP_004136935.1	7.7e-98	84.43	LIM domain-containing protein WLIM1 [Cucumis sativus] >KGN43845.1 hypothetical p...	[more]
XP_022988956.1	1.2e-95	82.86	LIM domain-containing protein WLIM1-like [Cucurbita maxima]	[more]
XP_022148729.1	2.1e-95	84.29	LIM domain-containing protein WLIM1-like [Momordica charantia]	[more]

BLAST of Cla97C02G033890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94JX5	1.6e-77	74.73	LIM domain-containing protein WLIM1 OS=Arabidopsis thaliana OX=3702 GN=WLIM1 PE=...	[more]
P29675	6.6e-68	64.74	Pollen-specific protein SF3 OS=Helianthus annuus OX=4232 GN=SF3 PE=2 SV=1	[more]
O04193	6.9e-57	58.70	LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A P...	[more]
Q9M047	9.3e-54	50.72	LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B P...	[more]
Q1ECF5	1.4e-49	48.33	LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana OX=3702 GN=PLIM2B P...	[more]

BLAST of Cla97C02G033890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SP97	1.4e-100	86.32	LIM domain protein GLIM1a OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A0A0K2E5	3.8e-98	84.43	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071340 PE=4 SV=1	[more]
A0A6J1JIN6	6.0e-96	82.86	LIM domain-containing protein WLIM1-like OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A6J1D4V0	1.0e-95	84.29	LIM domain-containing protein WLIM1-like OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1EIM6	1.0e-95	82.38	LIM domain-containing protein WLIM1-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

BLAST of Cla97C02G033890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10200.1	1.1e-78	74.73	GATA type zinc finger transcription factor family protein	[more]
AT2G39900.1	4.9e-58	58.70	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.1	6.6e-55	50.72	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.2	6.6e-55	50.72	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.3	6.6e-55	50.72	GATA type zinc finger transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001781	Zinc finger, LIM-type	SMART	SM00132	lim_4	coord: 10..62 e-value: 5.3E-10 score: 49.2 coord: 105..168 e-value: 1.3E-11 score: 54.6
IPR001781	Zinc finger, LIM-type	PFAM	PF00412	LIM	coord: 11..65 e-value: 2.1E-9 score: 37.4 coord: 106..172 e-value: 1.1E-10 score: 41.6
IPR001781	Zinc finger, LIM-type	PROSITE	PS00478	LIM_DOMAIN_1	coord: 11..45
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 9..69 score: 13.1671
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 104..175 score: 12.1573
None	No IPR available	GENE3D	2.10.110.10	Cysteine Rich Protein	coord: 5..75 e-value: 5.0E-19 score: 70.3
None	No IPR available	GENE3D	2.10.110.10	Cysteine Rich Protein	coord: 99..179 e-value: 9.4E-17 score: 62.9
None	No IPR available	PANTHER	PTHR24206	OS06G0237300 PROTEIN	coord: 1..196
None	No IPR available	PANTHER	PTHR24206:SF35	LIM DOMAIN-CONTAINING PROTEIN WLIM1	coord: 1..196
None	No IPR available	CDD	cd09441	LIM2_SF3	coord: 106..177 e-value: 2.88878E-36 score: 119.497
None	No IPR available	CDD	cd09440	LIM1_SF3	coord: 7..69 e-value: 1.0313E-36 score: 121.033
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 37..76
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 143..182
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 98..142
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 4..36

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C02G033890.2	Cla97C02G033890.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051017	actin filament bundle assembly
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0046872	metal ion binding