Cla97C02G033660 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C02G033660
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	RING-type domain-containing protein
Location	Cla97Chr02: 7198205 .. 7200210 (-)
RNA-Seq Expression	Cla97C02G033660
Synteny	Cla97C02G033660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGAGCGCTTCGGAGCTGTTTCATTGTCGGAGGTACAGATTGGGTCGCACTGACGCGGATTTGGGACTTGATTCTGAGCCTCCCGATCGGCATCTTCAGTATCAACGCCGTCATCATGCTCACAACGGCAACCACCGTCGCGATTTGAACTCCTGTGGCGCTTTCCGGCGGTCATCGCTGCATGAACGCCGCCAATCTCCTAGATTTTTTAACCCTGTAAGGAAGGCTGGGTTTCTGTTACTTGAGAAATTGGGTTTTTAATTCGATGAAGTCTATATTAACGGCTGAGAATTGTTGGAGTTGGAAGAACTGTTCATATTTTGTTTTGATTGGGAATTTTTTAGCGTTTCTGACCTAAAAGTTCTTCTAAACCGTAGAATCAGTTGGGAATATGTTGAAAAGATCATGTTTGCCCTAATTTATTAGTTAAGGTTGTTGGGATGGTTTTATATGATATCCCTGGGTTCATGCCCTAAGAATAGTGTCTTTTGCACTTAATTTAGTCTTGTAATCGGAGTTCCAATTATGAGTTTCTTTGTTTTGTTAATGTTTTTAAAAGTTTTAGTTGTTTTTGGTTTTAGAATTTGACTATGATTCAAATGTTTTCGTATGAAAGATGAAAACTGATTAAAAACTAAATGGTTAGCAACGGATATTTGGCTAAGCTAATGAGTTAGTGATTATTCTTATTCTTCAGTGATAATTCTGTTTTCCATTGCTATGAAATACTTGGAACCTGAATATAACTTTTCCAGTTTTATTAGCTTCTTAATGCTACTTGGCTGTGAAAATATGATTTAGTTGGTATGTGATCATGGAGACATAACTTCCTTACAATTAAGGATGCTTTTCTATATTTCTTTTTCTGGGTTGTCATCTCTATTCTGAATTTCAAATTCAATTAGTTTGGAGGCATTAACACTATGTCTTCATTGTAGCTTTCTGTTGACCGATCGCCTGCACAGTCTGACTCAGTTACAAGCATTGGTTCTAGAAATAATATCAATGCAAATACACAGAATAGCTTGAGGACTGGCTTAAGTGGGGAGTCCAGATTGCCTGGATCCGTTTTACTTGCTAGAGAAAGGCTTTTCGAGAGATTGAGAGGTGTCTCTTCACCGACGAGCAGGTCAGTTCCTATTGTCATGTGCTTGTTGTTTACACTACTATGCAGAAAAATTTGGGACTTCAATTGGAATATTCCATGTTATTTCTCCTAGAAACATCTTTCTAGATATAATCACTTTTGTCAGGTTCAAGACATGTCTCTAATTATACAAAATCAATGTAGTGTTTGATTTTACACTTTTAAATGTGATTTTCATATAATCAAAGTTGATTTTAAATAATTAAATGAACGCTTGTAAACACATGCTGTGGTATGAATTTACTTGTATGATTTTCTTTGTTGATTGGGAGTTGGTTGTACTGTATACTCAGAAAATAGTATCCGATTCCAATAAACTCATGAAGTTTCTACAATTTCTGTCCTAGACTTCAACATTCTTGAAAAACTATATTTCTGGATAGCAAATTGGACTTGAAAATTGTTACTGGTTGGCCATTTGTATGTTGACAACTGGAATATATCCCAGCTTTGTAGTATTGCTAACTGAATTAGTTTATTCATCAGGAACACTCTTGCTGAAGCATCAGATGTAAGTCCAGAAATCTTGACAAGTCGATCACAGAGGATATCCCTTGTTGATGCTGACAGGATTCGATTAGTTCCTGCACCCAGCAAGAGGCCCCCTGGTCTCTCACAGGATGCAATCAACCGCTTACAACTCGAGGTTTTTATCAATACAGAGCACATCATCGACGATGACATGACTACGACAACAACGTCAAAGGATTGTAGTATATGTTTAGAGAGTTTCACAGATGGAGACAAGCTCATCCATTTACCTTGTGAGCACAAATTTCATCATGCTTGCTTGGACCGATGGATTCGAACATGTGGAGAATGTCCATATTGTCGACAACATATCGTCGTTAACTAA

mRNA sequence

ATGACGAGCGCTTCGGAGCTGTTTCATTGTCGGAGGTACAGATTGGGTCGCACTGACGCGGATTTGGGACTTGATTCTGAGCCTCCCGATCGGCATCTTCAGTATCAACGCCGTCATCATGCTCACAACGGCAACCACCGTCGCGATTTGAACTCCTGTGGCGCTTTCCGGCGGTCATCGCTGCATGAACGCCGCCAATCTCCTAGATTTTTTAACCCTCTTTCTGTTGACCGATCGCCTGCACAGTCTGACTCAGTTACAAGCATTGGTTCTAGAAATAATATCAATGCAAATACACAGAATAGCTTGAGGACTGGCTTAAGTGGGGAGTCCAGATTGCCTGGATCCGTTTTACTTGCTAGAGAAAGGCTTTTCGAGAGATTGAGAGGTGTCTCTTCACCGACGAGCAGGAACACTCTTGCTGAAGCATCAGATGTAAGTCCAGAAATCTTGACAAGTCGATCACAGAGGATATCCCTTGTTGATGCTGACAGGATTCGATTAGTTCCTGCACCCAGCAAGAGGCCCCCTGGTCTCTCACAGGATGCAATCAACCGCTTACAACTCGAGGTTTTTATCAATACAGAGCACATCATCGACGATGACATGACTACGACAACAACGTCAAAGGATTGTAGTATATGTTTAGAGAGTTTCACAGATGGAGACAAGCTCATCCATTTACCTTGTGAGCACAAATTTCATCATGCTTGCTTGGACCGATGGATTCGAACATGTGGAGAATGTCCATATTGTCGACAACATATCGTCGTTAACTAA

Coding sequence (CDS)

ATGACGAGCGCTTCGGAGCTGTTTCATTGTCGGAGGTACAGATTGGGTCGCACTGACGCGGATTTGGGACTTGATTCTGAGCCTCCCGATCGGCATCTTCAGTATCAACGCCGTCATCATGCTCACAACGGCAACCACCGTCGCGATTTGAACTCCTGTGGCGCTTTCCGGCGGTCATCGCTGCATGAACGCCGCCAATCTCCTAGATTTTTTAACCCTCTTTCTGTTGACCGATCGCCTGCACAGTCTGACTCAGTTACAAGCATTGGTTCTAGAAATAATATCAATGCAAATACACAGAATAGCTTGAGGACTGGCTTAAGTGGGGAGTCCAGATTGCCTGGATCCGTTTTACTTGCTAGAGAAAGGCTTTTCGAGAGATTGAGAGGTGTCTCTTCACCGACGAGCAGGAACACTCTTGCTGAAGCATCAGATGTAAGTCCAGAAATCTTGACAAGTCGATCACAGAGGATATCCCTTGTTGATGCTGACAGGATTCGATTAGTTCCTGCACCCAGCAAGAGGCCCCCTGGTCTCTCACAGGATGCAATCAACCGCTTACAACTCGAGGTTTTTATCAATACAGAGCACATCATCGACGATGACATGACTACGACAACAACGTCAAAGGATTGTAGTATATGTTTAGAGAGTTTCACAGATGGAGACAAGCTCATCCATTTACCTTGTGAGCACAAATTTCATCATGCTTGCTTGGACCGATGGATTCGAACATGTGGAGAATGTCCATATTGTCGACAACATATCGTCGTTAACTAA

Protein sequence

MTSASELFHCRRYRLGRTDADLGLDSEPPDRHLQYQRRHHAHNGNHRRDLNSCGAFRRSSLHERRQSPRFFNPLSVDRSPAQSDSVTSIGSRNNINANTQNSLRTGLSGESRLPGSVLLARERLFERLRGVSSPTSRNTLAEASDVSPEILTSRSQRISLVDADRIRLVPAPSKRPPGLSQDAINRLQLEVFINTEHIIDDDMTTTTTSKDCSICLESFTDGDKLIHLPCEHKFHHACLDRWIRTCGECPYCRQHIVVN

Homology

[Close]

BLAST of Cla97C02G033660 vs. NCBI nr
Match: XP_038888994.1 (probable E3 ubiquitin-protein ligase RHY1A [Benincasa hispida])

HSP 1 Score: 463.4 bits (1191), Expect = 1.3e-126
Identity = 228/259 (88.03%), Postives = 239/259 (92.28%), Query Frame = 0


Query: 1   MTSASELFHCRRYRLGRTDADLGLDSEPPDRHLQYQRRHHAHNGNHRRDLNSCGAFRRSS 60
           MTSASELF+ RRYRLGRTDADLGLDSEPPDR+LQYQRRHH HN NHRRD NSCG FRRSS
Sbjct: 1   MTSASELFYSRRYRLGRTDADLGLDSEPPDRYLQYQRRHHGHNANHRRDFNSCGTFRRSS 60

Query: 61  LHERRQSPRFFNPLSVDRSPAQSDSVTSIGSRNNINANTQNSLRTGLSGESRLPGSVLLA 120
           L ERRQSPRFFNPLSVDR P QSDSVTS GSRNNIN NTQNSLRTGLSG+SRLPGSVLLA
Sbjct: 61  LQERRQSPRFFNPLSVDRLPTQSDSVTSDGSRNNINPNTQNSLRTGLSGDSRLPGSVLLA 120

Query: 121 RERLFERLRGVSSPTSRNTLAEASDVSPEILTSRSQRISLVDADRIRLVPAPSKRPPGLS 180
           RERL ERLRG SSP SRN L EA D SPEI T+RSQRISLVDADR++LVPAPSKRPPGLS
Sbjct: 121 RERLLERLRGASSPRSRNALVEALDGSPEISTNRSQRISLVDADRMQLVPAPSKRPPGLS 180

Query: 181 QDAINRLQLEVFINTEHIIDDDMTTTTTSKDCSICLESFTDGDKLIHLPCEHKFHHACLD 240
           QDAI+RLQLEVFINTEHIIDDD+TTTTTS +CSICLESFTDGD LIHLPCEHKFHHACLD
Sbjct: 181 QDAIDRLQLEVFINTEHIIDDDVTTTTTSNECSICLESFTDGDVLIHLPCEHKFHHACLD 240

Query: 241 RWIRTCGECPYCRQHIVVN 260
           RWIRTCGECPYCRQH+V+N
Sbjct: 241 RWIRTCGECPYCRQHVVIN 259

[Close]

BLAST of Cla97C02G033660 vs. NCBI nr
Match: XP_004136947.1 (probable E3 ubiquitin-protein ligase RHY1A [Cucumis sativus] >KGN43862.1 hypothetical protein Csa_017364 [Cucumis sativus])

HSP 1 Score: 453.8 bits (1166), Expect = 1.0e-123
Identity = 223/259 (86.10%), Postives = 236/259 (91.12%), Query Frame = 0


Query: 1   MTSASELFHCRRYRLGRTDADLGLDSEPPDRHLQYQRRHHAHNGNHRRDLNSCGAFRRSS 60
           MTSASELF+CRRYR GRTD+DLGLDSEPPDRHLQYQRRHH HNGNHRRDLNSCG FRRSS
Sbjct: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHGHNGNHRRDLNSCGDFRRSS 60

Query: 61  LHERRQSPRFFNPLSVDRSPAQSDSVTSIGSRNNINANTQNSLRTGLSGESRLPGSVLLA 120
           L ERRQSPRFFNPLSVDRSPAQSDS TS+ SRNNIN NTQNSLR+GLSG+SRLPGSVLLA
Sbjct: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVASRNNINGNTQNSLRSGLSGDSRLPGSVLLA 120

Query: 121 RERLFERLRGVSSPTSRNTLAEASDVSPEILTSRSQRISLVDADRIRLVPAPSKRPPGLS 180
           RERL ERLRG SSPT+RN L EAS+ +PE  TSRSQRISLVDADR+RLV  PSKRPPGLS
Sbjct: 121 RERLLERLRGASSPTTRNALVEASNGNPETTTSRSQRISLVDADRMRLVAVPSKRPPGLS 180

Query: 181 QDAINRLQLEVFINTEHIIDDDMTTTTTSKDCSICLESFTDGDKLIHLPCEHKFHHACLD 240
           QDAINRLQLEVFINT+HII+D +  T TS DCSICLESFTDGDKLIHLPCEHKFHH CLD
Sbjct: 181 QDAINRLQLEVFINTDHIINDGV-MTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCLD 240

Query: 241 RWIRTCGECPYCRQHIVVN 260
           RWIRTCGECPYCRQHI +N
Sbjct: 241 RWIRTCGECPYCRQHIAIN 258

[Close]

BLAST of Cla97C02G033660 vs. NCBI nr
Match: XP_008455026.1 (PREDICTED: E3 ubiquitin-protein ligase RLIM [Cucumis melo] >KAA0031356.1 E3 ubiquitin-protein ligase RLIM [Cucumis melo var. makuwa] >TYK06808.1 E3 ubiquitin-protein ligase RLIM [Cucumis melo var. makuwa])

HSP 1 Score: 453.0 bits (1164), Expect = 1.8e-123
Identity = 224/256 (87.50%), Postives = 236/256 (92.19%), Query Frame = 0


Query: 1   MTSASELFHCRRYRLGRTDADLGLDSEPPDRHLQYQRRHHAHNGNHRRDLNSCGAFRRSS 60
           MTSASELF+CRRYR GRTD+DLGLDSEPPDR+LQYQRRHH HN NHRRDLNSCG FRRSS
Sbjct: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRNLQYQRRHHGHNANHRRDLNSCGDFRRSS 60

Query: 61  LHERRQSPRFFNPLSVDRSPAQSDSVTSIGSRNNINANTQNSLRTGLSGESRLPGSVLLA 120
           L ERRQSPRFFNPLSVDRSPAQSDS TS+GSRNNIN NTQNSLR+GLSG+SRLPGSVLLA
Sbjct: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVGSRNNINGNTQNSLRSGLSGDSRLPGSVLLA 120

Query: 121 RERLFERLRGVSSPTSRNTLAEASDVSPEILTSRSQRISLVDADRIRLVPAPSKRPPGLS 180
           RERL ERLRG SSPTSRN L EAS+ +PEI TSRSQRISL+DADR+RLV  PSKRPPGLS
Sbjct: 121 RERLLERLRGASSPTSRNALVEASNGNPEISTSRSQRISLIDADRMRLVAVPSKRPPGLS 180

Query: 181 QDAINRLQLEVFINTEHIIDDDMTTTTTSKDCSICLESFTDGDKLIHLPCEHKFHHACLD 240
           QDAINRLQLEVFINT+ IIDDD+  T TS DCSICLESFTDGDKLIHLPCEHKFHHACLD
Sbjct: 181 QDAINRLQLEVFINTDRIIDDDV-MTITSTDCSICLESFTDGDKLIHLPCEHKFHHACLD 240

Query: 241 RWIRTCGECPYCRQHI 257
           RWIRTCGECPYCRQHI
Sbjct: 241 RWIRTCGECPYCRQHI 255

[Close]

BLAST of Cla97C02G033660 vs. NCBI nr
Match: XP_022988901.1 (probable E3 ubiquitin-protein ligase RHY1A [Cucurbita maxima])

HSP 1 Score: 436.4 bits (1121), Expect = 1.7e-118
Identity = 218/259 (84.17%), Postives = 230/259 (88.80%), Query Frame = 0


Query: 1   MTSASELFHCRRYRLGRTDADLGLDSEPPDRHLQYQRRHHAHNGNHRRDLNSCGAFRRSS 60
           MTSASELFH RRYRLGRTDADLGLDSEPPDRHLQYQRRHH HNGNHRR LN+CGAFRRSS
Sbjct: 1   MTSASELFHSRRYRLGRTDADLGLDSEPPDRHLQYQRRHHGHNGNHRRVLNACGAFRRSS 60

Query: 61  LHERRQSPRFFNPLSVDRSPAQSDSVTSIGSRNNINANTQNSLRTGLSGESRLPGSVLLA 120
           L ER QSPRF NPL+VDRSPAQS+S  S+GSRNNINAN QNSLR GLSG+SRLPGSVLLA
Sbjct: 61  LQERHQSPRFLNPLAVDRSPAQSESGISVGSRNNINANIQNSLRPGLSGDSRLPGSVLLA 120

Query: 121 RERLFERLRGVSSPTSRNTLAEASDVSPEILTSRSQRISLVDADRIRLVPAPSKRPPGLS 180
           RERLFERLRG SSPT RN L EA D SPEI  SRSQ ISL DADR+RLVPA SKRPPGLS
Sbjct: 121 RERLFERLRGASSPTIRNGLVEALDWSPEISASRSQMISLEDADRLRLVPAVSKRPPGLS 180

Query: 181 QDAINRLQLEVFINTEHIIDDDMTTTTTSKDCSICLESFTDGDKLIHLPCEHKFHHACLD 240
            +AIN LQLE FI+ EHIIDDD+T TTTS DCSICL+SF DGDKLIHLPC+HKFHHACL+
Sbjct: 181 LEAINCLQLERFIDIEHIIDDDLTMTTTSNDCSICLDSFIDGDKLIHLPCKHKFHHACLE 240

Query: 241 RWIRTCGECPYCRQHIVVN 260
            WIRTCGECPYCRQHIVVN
Sbjct: 241 PWIRTCGECPYCRQHIVVN 259

[Close]

BLAST of Cla97C02G033660 vs. NCBI nr
Match: XP_023529438.1 (probable E3 ubiquitin-protein ligase RHY1A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 434.5 bits (1116), Expect = 6.5e-118
Identity = 217/259 (83.78%), Postives = 230/259 (88.80%), Query Frame = 0


Query: 1   MTSASELFHCRRYRLGRTDADLGLDSEPPDRHLQYQRRHHAHNGNHRRDLNSCGAFRRSS 60
           MTSASELFH RRYRLGRTDADLGLDSEPPDRHLQYQRRHH HNGNHRR LN+CGAFRRSS
Sbjct: 1   MTSASELFHSRRYRLGRTDADLGLDSEPPDRHLQYQRRHHGHNGNHRRVLNACGAFRRSS 60

Query: 61  LHERRQSPRFFNPLSVDRSPAQSDSVTSIGSRNNINANTQNSLRTGLSGESRLPGSVLLA 120
           L ERRQSPRF NPL+VDRSPAQS+S  S+GSRNNINAN QNSLR GLSG+SRLPGSVLLA
Sbjct: 61  LQERRQSPRFLNPLAVDRSPAQSESGISVGSRNNINANIQNSLRPGLSGDSRLPGSVLLA 120

Query: 121 RERLFERLRGVSSPTSRNTLAEASDVSPEILTSRSQRISLVDADRIRLVPAPSKRPPGLS 180
           RERLFERLRG SSPT RN L EA D SPEI  SRSQ ISL DADR+RLVPA SKRPPGLS
Sbjct: 121 RERLFERLRGASSPTIRNGLVEALDWSPEISASRSQMISLEDADRLRLVPAVSKRPPGLS 180

Query: 181 QDAINRLQLEVFINTEHIIDDDMTTTTTSKDCSICLESFTDGDKLIHLPCEHKFHHACLD 240
           Q+AIN LQLE FI+ EHIIDDD+T   TS DCSICL+SF DGDKLIHLPC+HKFHHACL+
Sbjct: 181 QEAINCLQLERFIDIEHIIDDDLTMIRTSNDCSICLDSFIDGDKLIHLPCKHKFHHACLE 240

Query: 241 RWIRTCGECPYCRQHIVVN 260
           +WIRTCGECPYCRQ IVVN
Sbjct: 241 QWIRTCGECPYCRQRIVVN 259

[Close]

BLAST of Cla97C02G033660 vs. ExPASy Swiss-Prot
Match: Q852U6 (Probable E3 ubiquitin-protein ligase RHY1A OS=Arabidopsis thaliana OX=3702 GN=RHY1A PE=1 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 2.8e-39
Identity = 109/265 (41.13%), Postives = 142/265 (53.58%), Query Frame = 0


Query: 1   MTSASELFHCRRYRLGRTDADLGLDSEPPDRHL-QYQRRHHAHNGNHRRDLNSCGAFRRS 60
           MTSASELF  RR R GR+D  L  D+     H   + RRH  H+ N R D + C   RR 
Sbjct: 1   MTSASELFSTRRSRPGRSDPALESDTSSYRHHSHHHHRRHGVHHHNQRHDSDGCDPLRRP 60

Query: 61  SLHERRQSPRFFNPLSVDRSPAQSDSVTS-IGSRNNINANTQNSLRTGLSGESRLPGSVL 120
           +   RR    F +P+     P +    TS   + ++ +  TQ+S    L+G  RLPG+VL
Sbjct: 61  TPRLRR---FFHHPIQERSRPIRDVQGTSQYLNTDSTDTETQSSSFVNLNGSERLPGAVL 120

Query: 121 LARERLFERLRGVS-SPTSRNTLAEASDVSPEILTSRSQRISLVDADRI------RLVPA 180
           LAR+RLFERLRGVS S  SR+      D        R      +D D I      ++   
Sbjct: 121 LARDRLFERLRGVSLSSNSRSNRVSLDD-------QRESSFHSIDGDPIFQLAGLQVTYE 180

Query: 181 PSKRPPGLSQDAINRLQLEVFINTEHIIDDDMTTTTTSKDCSICLESFTDGDKLIHLPCE 240
            +K+P GL+QDAIN L  + F + E          +  +DCSICLESFT GD LI LPC 
Sbjct: 181 CNKKPQGLTQDAINCLHRQTFSSAE--------VKSEMRDCSICLESFTKGDMLISLPCT 240

Query: 241 HKFHHACLDRWIRTCGECPYCRQHI 257
           H FH +CL+ W+R CG+CP CR+ I
Sbjct: 241 HSFHSSCLNPWLRACGDCPCCRRAI 247

[Close]

BLAST of Cla97C02G033660 vs. ExPASy Swiss-Prot
Match: Q641J8 (E3 ubiquitin-protein ligase RNF12-A OS=Xenopus laevis OX=8355 GN=rnf12-a PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 3.6e-10
Identity = 28/84 (33.33%), Postives = 47/84 (55.95%), Query Frame = 0


Query: 175 RPPGLSQDAINRLQLEVFINTEHIIDDDMTTTTTSKDCSICLESFTDGDKLIHLPCEHKF 234
           +P GL+++ I+ L    F   + +           K CS+C+  +T+G+KL  LPC H++
Sbjct: 542 QPRGLTKEQIDNLSTRNFGENDAL-----------KTCSVCITEYTEGNKLRKLPCSHEY 601

Query: 235 HHACLDRWIRTCGECPYCRQHIVV 259
           H  C+DRW+     CP CR+ ++V
Sbjct: 602 HIHCIDRWLSENSTCPICRRAVLV 614

[Close]

BLAST of Cla97C02G033660 vs. ExPASy Swiss-Prot
Match: Q07G42 (E3 ubiquitin-protein ligase RNF12 OS=Xenopus tropicalis OX=8364 GN=rnf12 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 3.6e-10
Identity = 28/84 (33.33%), Postives = 47/84 (55.95%), Query Frame = 0


Query: 175 RPPGLSQDAINRLQLEVFINTEHIIDDDMTTTTTSKDCSICLESFTDGDKLIHLPCEHKF 234
           +P GL+++ I+ L    F   + +           K CS+C+  +T+G+KL  LPC H++
Sbjct: 559 QPRGLTKEQIDNLSTRNFGENDAL-----------KTCSVCITEYTEGNKLRKLPCSHEY 618

Query: 235 HHACLDRWIRTCGECPYCRQHIVV 259
           H  C+DRW+     CP CR+ ++V
Sbjct: 619 HVHCIDRWLSENSTCPICRRAVLV 631

[Close]

BLAST of Cla97C02G033660 vs. ExPASy Swiss-Prot
Match: A5WWA0 (E3 ubiquitin-protein ligase znrf3 OS=Danio rerio OX=7955 GN=znrf3 PE=1 SV=2)

HSP 1 Score: 66.2 bits (160), Expect = 6.1e-10
Identity = 23/56 (41.07%), Postives = 39/56 (69.64%), Query Frame = 0


Query: 202 DMTTTTTSKDCSICLESFTDGDKLIHLPCEHKFHHACLDRWIRTCGECPYCRQHIV 258
           D  +++++ DC+ICLE + DG++L  +PC H+FH  C+D W+     CP+CR +I+
Sbjct: 257 DSVSSSSTSDCAICLEKYIDGEELRVIPCAHRFHKKCVDPWLLQHHTCPHCRHNII 312

[Close]

BLAST of Cla97C02G033660 vs. ExPASy Swiss-Prot
Match: Q9ULT6 (E3 ubiquitin-protein ligase ZNRF3 OS=Homo sapiens OX=9606 GN=ZNRF3 PE=1 SV=3)

HSP 1 Score: 66.2 bits (160), Expect = 6.1e-10
Identity = 23/56 (41.07%), Postives = 39/56 (69.64%), Query Frame = 0


Query: 202 DMTTTTTSKDCSICLESFTDGDKLIHLPCEHKFHHACLDRWIRTCGECPYCRQHIV 258
           D  +++++ DC+ICLE + DG++L  +PC H+FH  C+D W+     CP+CR +I+
Sbjct: 283 DTLSSSSTSDCAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNII 338

[Close]

BLAST of Cla97C02G033660 vs. ExPASy TrEMBL
Match: A0A0A0K6D2 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G071510 PE=4 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 5.0e-124
Identity = 223/259 (86.10%), Postives = 236/259 (91.12%), Query Frame = 0


Query: 1   MTSASELFHCRRYRLGRTDADLGLDSEPPDRHLQYQRRHHAHNGNHRRDLNSCGAFRRSS 60
           MTSASELF+CRRYR GRTD+DLGLDSEPPDRHLQYQRRHH HNGNHRRDLNSCG FRRSS
Sbjct: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHGHNGNHRRDLNSCGDFRRSS 60

Query: 61  LHERRQSPRFFNPLSVDRSPAQSDSVTSIGSRNNINANTQNSLRTGLSGESRLPGSVLLA 120
           L ERRQSPRFFNPLSVDRSPAQSDS TS+ SRNNIN NTQNSLR+GLSG+SRLPGSVLLA
Sbjct: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVASRNNINGNTQNSLRSGLSGDSRLPGSVLLA 120

Query: 121 RERLFERLRGVSSPTSRNTLAEASDVSPEILTSRSQRISLVDADRIRLVPAPSKRPPGLS 180
           RERL ERLRG SSPT+RN L EAS+ +PE  TSRSQRISLVDADR+RLV  PSKRPPGLS
Sbjct: 121 RERLLERLRGASSPTTRNALVEASNGNPETTTSRSQRISLVDADRMRLVAVPSKRPPGLS 180

Query: 181 QDAINRLQLEVFINTEHIIDDDMTTTTTSKDCSICLESFTDGDKLIHLPCEHKFHHACLD 240
           QDAINRLQLEVFINT+HII+D +  T TS DCSICLESFTDGDKLIHLPCEHKFHH CLD
Sbjct: 181 QDAINRLQLEVFINTDHIINDGV-MTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCLD 240

Query: 241 RWIRTCGECPYCRQHIVVN 260
           RWIRTCGECPYCRQHI +N
Sbjct: 241 RWIRTCGECPYCRQHIAIN 258

[Close]

BLAST of Cla97C02G033660 vs. ExPASy TrEMBL
Match: A0A5A7SMR0 (E3 ubiquitin-protein ligase RLIM OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001110 PE=4 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 8.5e-124
Identity = 224/256 (87.50%), Postives = 236/256 (92.19%), Query Frame = 0


Query: 1   MTSASELFHCRRYRLGRTDADLGLDSEPPDRHLQYQRRHHAHNGNHRRDLNSCGAFRRSS 60
           MTSASELF+CRRYR GRTD+DLGLDSEPPDR+LQYQRRHH HN NHRRDLNSCG FRRSS
Sbjct: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRNLQYQRRHHGHNANHRRDLNSCGDFRRSS 60

Query: 61  LHERRQSPRFFNPLSVDRSPAQSDSVTSIGSRNNINANTQNSLRTGLSGESRLPGSVLLA 120
           L ERRQSPRFFNPLSVDRSPAQSDS TS+GSRNNIN NTQNSLR+GLSG+SRLPGSVLLA
Sbjct: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVGSRNNINGNTQNSLRSGLSGDSRLPGSVLLA 120

Query: 121 RERLFERLRGVSSPTSRNTLAEASDVSPEILTSRSQRISLVDADRIRLVPAPSKRPPGLS 180
           RERL ERLRG SSPTSRN L EAS+ +PEI TSRSQRISL+DADR+RLV  PSKRPPGLS
Sbjct: 121 RERLLERLRGASSPTSRNALVEASNGNPEISTSRSQRISLIDADRMRLVAVPSKRPPGLS 180

Query: 181 QDAINRLQLEVFINTEHIIDDDMTTTTTSKDCSICLESFTDGDKLIHLPCEHKFHHACLD 240
           QDAINRLQLEVFINT+ IIDDD+  T TS DCSICLESFTDGDKLIHLPCEHKFHHACLD
Sbjct: 181 QDAINRLQLEVFINTDRIIDDDV-MTITSTDCSICLESFTDGDKLIHLPCEHKFHHACLD 240

Query: 241 RWIRTCGECPYCRQHI 257
           RWIRTCGECPYCRQHI
Sbjct: 241 RWIRTCGECPYCRQHI 255

[Close]

BLAST of Cla97C02G033660 vs. ExPASy TrEMBL
Match: A0A1S3C156 (E3 ubiquitin-protein ligase RLIM OS=Cucumis melo OX=3656 GN=LOC103495299 PE=4 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 8.5e-124
Identity = 224/256 (87.50%), Postives = 236/256 (92.19%), Query Frame = 0


Query: 1   MTSASELFHCRRYRLGRTDADLGLDSEPPDRHLQYQRRHHAHNGNHRRDLNSCGAFRRSS 60
           MTSASELF+CRRYR GRTD+DLGLDSEPPDR+LQYQRRHH HN NHRRDLNSCG FRRSS
Sbjct: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRNLQYQRRHHGHNANHRRDLNSCGDFRRSS 60

Query: 61  LHERRQSPRFFNPLSVDRSPAQSDSVTSIGSRNNINANTQNSLRTGLSGESRLPGSVLLA 120
           L ERRQSPRFFNPLSVDRSPAQSDS TS+GSRNNIN NTQNSLR+GLSG+SRLPGSVLLA
Sbjct: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVGSRNNINGNTQNSLRSGLSGDSRLPGSVLLA 120

Query: 121 RERLFERLRGVSSPTSRNTLAEASDVSPEILTSRSQRISLVDADRIRLVPAPSKRPPGLS 180
           RERL ERLRG SSPTSRN L EAS+ +PEI TSRSQRISL+DADR+RLV  PSKRPPGLS
Sbjct: 121 RERLLERLRGASSPTSRNALVEASNGNPEISTSRSQRISLIDADRMRLVAVPSKRPPGLS 180

Query: 181 QDAINRLQLEVFINTEHIIDDDMTTTTTSKDCSICLESFTDGDKLIHLPCEHKFHHACLD 240
           QDAINRLQLEVFINT+ IIDDD+  T TS DCSICLESFTDGDKLIHLPCEHKFHHACLD
Sbjct: 181 QDAINRLQLEVFINTDRIIDDDV-MTITSTDCSICLESFTDGDKLIHLPCEHKFHHACLD 240

Query: 241 RWIRTCGECPYCRQHI 257
           RWIRTCGECPYCRQHI
Sbjct: 241 RWIRTCGECPYCRQHI 255

[Close]

BLAST of Cla97C02G033660 vs. ExPASy TrEMBL
Match: A0A6J1JIJ3 (probable E3 ubiquitin-protein ligase RHY1A OS=Cucurbita maxima OX=3661 GN=LOC111486117 PE=4 SV=1)

HSP 1 Score: 436.4 bits (1121), Expect = 8.2e-119
Identity = 218/259 (84.17%), Postives = 230/259 (88.80%), Query Frame = 0


Query: 1   MTSASELFHCRRYRLGRTDADLGLDSEPPDRHLQYQRRHHAHNGNHRRDLNSCGAFRRSS 60
           MTSASELFH RRYRLGRTDADLGLDSEPPDRHLQYQRRHH HNGNHRR LN+CGAFRRSS
Sbjct: 1   MTSASELFHSRRYRLGRTDADLGLDSEPPDRHLQYQRRHHGHNGNHRRVLNACGAFRRSS 60

Query: 61  LHERRQSPRFFNPLSVDRSPAQSDSVTSIGSRNNINANTQNSLRTGLSGESRLPGSVLLA 120
           L ER QSPRF NPL+VDRSPAQS+S  S+GSRNNINAN QNSLR GLSG+SRLPGSVLLA
Sbjct: 61  LQERHQSPRFLNPLAVDRSPAQSESGISVGSRNNINANIQNSLRPGLSGDSRLPGSVLLA 120

Query: 121 RERLFERLRGVSSPTSRNTLAEASDVSPEILTSRSQRISLVDADRIRLVPAPSKRPPGLS 180
           RERLFERLRG SSPT RN L EA D SPEI  SRSQ ISL DADR+RLVPA SKRPPGLS
Sbjct: 121 RERLFERLRGASSPTIRNGLVEALDWSPEISASRSQMISLEDADRLRLVPAVSKRPPGLS 180

Query: 181 QDAINRLQLEVFINTEHIIDDDMTTTTTSKDCSICLESFTDGDKLIHLPCEHKFHHACLD 240
            +AIN LQLE FI+ EHIIDDD+T TTTS DCSICL+SF DGDKLIHLPC+HKFHHACL+
Sbjct: 181 LEAINCLQLERFIDIEHIIDDDLTMTTTSNDCSICLDSFIDGDKLIHLPCKHKFHHACLE 240

Query: 241 RWIRTCGECPYCRQHIVVN 260
            WIRTCGECPYCRQHIVVN
Sbjct: 241 PWIRTCGECPYCRQHIVVN 259

[Close]

BLAST of Cla97C02G033660 vs. ExPASy TrEMBL
Match: A0A6J1EQ66 (probable E3 ubiquitin-protein ligase RHY1A OS=Cucurbita moschata OX=3662 GN=LOC111434663 PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 2.5e-115
Identity = 214/260 (82.31%), Postives = 230/260 (88.46%), Query Frame = 0


Query: 1   MTSASELFHCRRYRLGRTDADLGLDSEPPDRHLQYQRRHHAHNGNHRRDLNSCGAFRRSS 60
           MTSASELFH RRYRLGRTDADLGLDSEPPDRHLQYQRRHH HNGNHRR LN+CGAFRRSS
Sbjct: 1   MTSASELFHSRRYRLGRTDADLGLDSEPPDRHLQYQRRHHGHNGNHRRVLNACGAFRRSS 60

Query: 61  LHERRQSPRFFNPLSVDRSPAQSDSVTSIGSRNNINANTQNSLRTGLSGESRLPGSVLLA 120
           L ERRQSPRF +PL+VDRSPAQS+S  S+GSRNNI+AN QNSLR GL+G+SRLPGSVLLA
Sbjct: 61  LQERRQSPRFLDPLAVDRSPAQSESGISVGSRNNISANIQNSLRPGLNGDSRLPGSVLLA 120

Query: 121 RERLFERLRGVSSPTSRNTLAEASDVSPEILTSRSQRISLVDADRIRLVPAPSKRPPGLS 180
           RERLFERLRG SSPT RN L EA D SPEI  SRSQ ISL DADR+RLVPA SKRPPGLS
Sbjct: 121 RERLFERLRGASSPTIRNGLVEALDWSPEISASRSQMISLEDADRLRLVPAVSKRPPGLS 180

Query: 181 QDAINRLQLEVFINTE-HIIDDDMTTTTTSKDCSICLESFTDGDKLIHLPCEHKFHHACL 240
           Q+AIN LQLE FI+ E HIIDDD+T   TS DCSICL+SF DGDKLIHLPC+HKFHHACL
Sbjct: 181 QEAINCLQLERFIDIEQHIIDDDLTMIRTSNDCSICLDSFIDGDKLIHLPCKHKFHHACL 240

Query: 241 DRWIRTCGECPYCRQHIVVN 260
           ++WIRTCGECPYCRQ IVVN
Sbjct: 241 EQWIRTCGECPYCRQRIVVN 260

[Close]

BLAST of Cla97C02G033660 vs. TAIR 10
Match: AT1G49850.1 (RING/U-box superfamily protein )

HSP 1 Score: 163.7 bits (413), Expect = 2.0e-40
Identity = 109/265 (41.13%), Postives = 142/265 (53.58%), Query Frame = 0


Query: 1   MTSASELFHCRRYRLGRTDADLGLDSEPPDRHL-QYQRRHHAHNGNHRRDLNSCGAFRRS 60
           MTSASELF  RR R GR+D  L  D+     H   + RRH  H+ N R D + C   RR 
Sbjct: 1   MTSASELFSTRRSRPGRSDPALESDTSSYRHHSHHHHRRHGVHHHNQRHDSDGCDPLRRP 60

Query: 61  SLHERRQSPRFFNPLSVDRSPAQSDSVTS-IGSRNNINANTQNSLRTGLSGESRLPGSVL 120
           +   RR    F +P+     P +    TS   + ++ +  TQ+S    L+G  RLPG+VL
Sbjct: 61  TPRLRR---FFHHPIQERSRPIRDVQGTSQYLNTDSTDTETQSSSFVNLNGSERLPGAVL 120

Query: 121 LARERLFERLRGVS-SPTSRNTLAEASDVSPEILTSRSQRISLVDADRI------RLVPA 180
           LAR+RLFERLRGVS S  SR+      D        R      +D D I      ++   
Sbjct: 121 LARDRLFERLRGVSLSSNSRSNRVSLDD-------QRESSFHSIDGDPIFQLAGLQVTYE 180

Query: 181 PSKRPPGLSQDAINRLQLEVFINTEHIIDDDMTTTTTSKDCSICLESFTDGDKLIHLPCE 240
            +K+P GL+QDAIN L  + F + E          +  +DCSICLESFT GD LI LPC 
Sbjct: 181 CNKKPQGLTQDAINCLHRQTFSSAE--------VKSEMRDCSICLESFTKGDMLISLPCT 240

Query: 241 HKFHHACLDRWIRTCGECPYCRQHI 257
           H FH +CL+ W+R CG+CP CR+ I
Sbjct: 241 HSFHSSCLNPWLRACGDCPCCRRAI 247

[Close]

BLAST of Cla97C02G033660 vs. TAIR 10
Match: AT2G15580.1 (RING/U-box superfamily protein )

HSP 1 Score: 66.6 bits (161), Expect = 3.3e-11
Identity = 26/47 (55.32%), Postives = 32/47 (68.09%), Query Frame = 0


Query: 210 KDCSICLESFTDGDKLIHLPCEHKFHHACLDRWIRTCGECPYCRQHI 257
           +DC+ICL+ F  G+ L+HLPC HKFH  CL  W+ T   CPYCR  I
Sbjct: 148 QDCAICLDRFKKGETLVHLPCAHKFHSICLLPWLDTNVYCPYCRTDI 194

[Close]

BLAST of Cla97C02G033660 vs. TAIR 10
Match: AT5G55970.1 (RING/U-box superfamily protein )

HSP 1 Score: 64.7 bits (156), Expect = 1.3e-10
Identity = 24/57 (42.11%), Postives = 34/57 (59.65%), Query Frame = 0


Query: 200 DDDMTTTTTSKDCSICLESFTDGDKLIHLPCEHKFHHACLDRWIRTCGECPYCRQHI 257
           D D  T T   +C ICL  + D +++  LPC HKFH  C+D+W+R    CP C+Q +
Sbjct: 285 DSDSATVTDDPECCICLAKYKDKEEVRKLPCSHKFHSKCVDQWLRIISCCPLCKQDL 341

[Close]

BLAST of Cla97C02G033660 vs. TAIR 10
Match: AT5G55970.2 (RING/U-box superfamily protein )

HSP 1 Score: 64.7 bits (156), Expect = 1.3e-10
Identity = 24/57 (42.11%), Postives = 34/57 (59.65%), Query Frame = 0


Query: 200 DDDMTTTTTSKDCSICLESFTDGDKLIHLPCEHKFHHACLDRWIRTCGECPYCRQHI 257
           D D  T T   +C ICL  + D +++  LPC HKFH  C+D+W+R    CP C+Q +
Sbjct: 285 DSDSATVTDDPECCICLAKYKDKEEVRKLPCSHKFHSKCVDQWLRIISCCPLCKQDL 341

[Close]

BLAST of Cla97C02G033660 vs. TAIR 10
Match: AT3G61180.1 (RING/U-box superfamily protein )

HSP 1 Score: 61.2 bits (147), Expect = 1.4e-09
Identity = 23/49 (46.94%), Postives = 33/49 (67.35%), Query Frame = 0


Query: 211 DCSICLESFTDGDKLIHLPCEHKFHHACLDRWIRTCGECPYCRQHIVVN 260
           +CSICL ++ DG +L  LPC H FH  C+D+W+R    CP C+ +I+ N
Sbjct: 322 ECSICLCAYEDGVELRELPCRHHFHSLCVDKWLRINATCPLCKFNILKN 370

The following BLAST results are available for this feature:

BLAST of Cla97C02G033660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888994.1	1.3e-126	88.03	probable E3 ubiquitin-protein ligase RHY1A [Benincasa hispida]	[more]
XP_004136947.1	1.0e-123	86.10	probable E3 ubiquitin-protein ligase RHY1A [Cucumis sativus] >KGN43862.1 hypothe...	[more]
XP_008455026.1	1.8e-123	87.50	PREDICTED: E3 ubiquitin-protein ligase RLIM [Cucumis melo] >KAA0031356.1 E3 ubiq...	[more]
XP_022988901.1	1.7e-118	84.17	probable E3 ubiquitin-protein ligase RHY1A [Cucurbita maxima]	[more]
XP_023529438.1	6.5e-118	83.78	probable E3 ubiquitin-protein ligase RHY1A [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cla97C02G033660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q852U6	2.8e-39	41.13	Probable E3 ubiquitin-protein ligase RHY1A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
Q641J8	3.6e-10	33.33	E3 ubiquitin-protein ligase RNF12-A OS=Xenopus laevis OX=8355 GN=rnf12-a PE=1 SV...	[more]
Q07G42	3.6e-10	33.33	E3 ubiquitin-protein ligase RNF12 OS=Xenopus tropicalis OX=8364 GN=rnf12 PE=2 SV...	[more]
A5WWA0	6.1e-10	41.07	E3 ubiquitin-protein ligase znrf3 OS=Danio rerio OX=7955 GN=znrf3 PE=1 SV=2	[more]
Q9ULT6	6.1e-10	41.07	E3 ubiquitin-protein ligase ZNRF3 OS=Homo sapiens OX=9606 GN=ZNRF3 PE=1 SV=3	[more]

BLAST of Cla97C02G033660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K6D2	5.0e-124	86.10	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G071510 P...	[more]
A0A5A7SMR0	8.5e-124	87.50	E3 ubiquitin-protein ligase RLIM OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3C156	8.5e-124	87.50	E3 ubiquitin-protein ligase RLIM OS=Cucumis melo OX=3656 GN=LOC103495299 PE=4 SV...	[more]
A0A6J1JIJ3	8.2e-119	84.17	probable E3 ubiquitin-protein ligase RHY1A OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1EQ66	2.5e-115	82.31	probable E3 ubiquitin-protein ligase RHY1A OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]

BLAST of Cla97C02G033660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G49850.1	2.0e-40	41.13	RING/U-box superfamily protein	[more]
AT2G15580.1	3.3e-11	55.32	RING/U-box superfamily protein	[more]
AT5G55970.1	1.3e-10	42.11	RING/U-box superfamily protein	[more]
AT5G55970.2	1.3e-10	42.11	RING/U-box superfamily protein	[more]
AT3G61180.1	1.4e-09	46.94	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 212..252 e-value: 1.3E-5 score: 34.6
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 211..253 e-value: 1.9E-13 score: 50.5
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 212..253 score: 13.020386
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 170..257 e-value: 8.8E-20 score: 72.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..111
None	No IPR available	PANTHER	PTHR45931	SI:CH211-59O9.10	coord: 161..258
None	No IPR available	PANTHER	PTHR45931:SF10	E3 UBIQUITIN-PROTEIN LIGASE RHY1A-RELATED	coord: 161..258
None	No IPR available	PANTHER	PTHR45931	SI:CH211-59O9.10	coord: 1..153
None	No IPR available	PANTHER	PTHR45931:SF10	E3 UBIQUITIN-PROTEIN LIGASE RHY1A-RELATED	coord: 1..153
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 211..253 e-value: 6.28583E-16 score: 67.7121
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 195..258

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C02G033660.1	Cla97C02G033660.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
molecular_function	GO:0061630	ubiquitin protein ligase activity