Cla97C01G020570 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C01G020570
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	Unknown protein
Location	Cla97Chr01: 33163408 .. 33163640 (+)
RNA-Seq Expression	Cla97C01G020570
Synteny	Cla97C01G020570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCCCCTTCCGGAGTGAGAGACCCACAAAGGTAACCGGCGAGTGAGATTGAAAAGGGGCAAGTTAGATCTTTGCAAGGGAGAGACAGTGGAGAGTAGCAAACTTGTGGTTAGGGATGAAACTGGGCGACGGTTGGAGTCGCTGTCGCCGTCGGAAGAGGGCAATAGACGACCGTCAACGATGAACTGGAACCAACTTCTCGACCGCTGTTGCGTAGAAATTCAGAGATGA

mRNA sequence

ATGAGCCCCTTCCGGAGTGAGAGACCCACAAAGGTAACCGGCGAGGATGAAACTGGGCGACGGTTGGAGTCGCTGTCGCCGTCGGAAGAGGGCAATAGACGACCGTCAACGATGAACTGGAACCAACTTCTCGACCGCTGTTGCGTAGAAATTCAGAGATGA

Coding sequence (CDS)

ATGAGCCCCTTCCGGAGTGAGAGACCCACAAAGGTAACCGGCGAGGATGAAACTGGGCGACGGTTGGAGTCGCTGTCGCCGTCGGAAGAGGGCAATAGACGACCGTCAACGATGAACTGGAACCAACTTCTCGACCGCTGTTGCGTAGAAATTCAGAGATGA

Protein sequence

MSPFRSERPTKVTGEDETGRRLESLSPSEEGNRRPSTMNWNQLLDRCCVEIQR

Homology

The following BLAST results are available for this feature:

BLAST of Cla97C01G020570 vs.


Match Name	E-value	Identity	Description

BLAST of Cla97C01G020570 vs.


Match Name	E-value	Identity	Description

BLAST of Cla97C01G020570 vs.


Match Name	E-value	Identity	Description

BLAST of Cla97C01G020570 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..41

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C01G020570.1	Cla97C01G020570.1	mRNA