Cla97C01G019690 (gene) Watermelon (97103) v2.5

Overview
NameCla97C01G019690
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionTransducin/WD40 repeat-like superfamily protein
LocationCla97Chr01: 32582359 .. 32582757 (-)
RNA-Seq ExpressionCla97C01G019690
SyntenyCla97C01G019690
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGAAAAAACAAGACGAGTCCACCGAAAGACGAAGGCGCCGGCCAATCTCTGCCTCCGAAAGCCAAGAGGCGACGCCACGAAGAACAACAAGGCCGCGGCGGCCATGACTCTGTTTGAACGCCTCCGCGAGGCTGTTTTTCGTTTTATAATGCTATGTGCTCTCTCAAAGGCCACAAATCATCATCCCGCCGGCGGAGCCGCCTTCCAGGACGACGTCGTCGTTAGGCGGCGACACGCATACCCAAACGTCGACCACCACCACAGCGAAGCCGTCGCCGATTGCATCGAATTCATCAAGATGAAGGCGTATTCCGACGACGAAATAATTCTTGACCGTGGATCGGTGGACGTCGATGATGATATGGCGGTGTCGGTGCCGGTGCCGGTCAGGTAA

mRNA sequence

ATGGCCGAAAAAACAAGACGAGTCCACCGAAAGACGAAGGCGCCGGCCAATCTCTGCCTCCGAAAGCCAAGAGGCGACGCCACGAAGAACAACAAGGCCGCGGCGGCCATGACTCTGTTTGAACGCCTCCGCGAGGCTGTTTTTCGTTTTATAATGCTATGTGCTCTCTCAAAGGCCACAAATCATCATCCCGCCGGCGGAGCCGCCTTCCAGGACGACGTCGTCGTTAGGCGGCGACACGCATACCCAAACGTCGACCACCACCACAGCGAAGCCGTCGCCGATTGCATCGAATTCATCAAGATGAAGGCGTATTCCGACGACGAAATAATTCTTGACCGTGGATCGGTGGACGTCGATGATGATATGGCGGTGTCGGTGCCGGTGCCGGTCAGGTAA

Coding sequence (CDS)

ATGGCCGAAAAAACAAGACGAGTCCACCGAAAGACGAAGGCGCCGGCCAATCTCTGCCTCCGAAAGCCAAGAGGCGACGCCACGAAGAACAACAAGGCCGCGGCGGCCATGACTCTGTTTGAACGCCTCCGCGAGGCTGTTTTTCGTTTTATAATGCTATGTGCTCTCTCAAAGGCCACAAATCATCATCCCGCCGGCGGAGCCGCCTTCCAGGACGACGTCGTCGTTAGGCGGCGACACGCATACCCAAACGTCGACCACCACCACAGCGAAGCCGTCGCCGATTGCATCGAATTCATCAAGATGAAGGCGTATTCCGACGACGAAATAATTCTTGACCGTGGATCGGTGGACGTCGATGATGATATGGCGGTGTCGGTGCCGGTGCCGGTCAGGTAA

Protein sequence

MAEKTRRVHRKTKAPANLCLRKPRGDATKNNKAAAAMTLFERLREAVFRFIMLCALSKATNHHPAGGAAFQDDVVVRRRHAYPNVDHHHSEAVADCIEFIKMKAYSDDEIILDRGSVDVDDDMAVSVPVPVR
Homology
BLAST of Cla97C01G019690 vs. NCBI nr
Match: KGN49339.2 (hypothetical protein Csa_003207 [Cucumis sativus])

HSP 1 Score: 220.3 bits (560), Expect = 9.8e-54
Identity = 114/134 (85.07%), Postives = 118/134 (88.06%), Query Frame = 0

Query: 1   MAEKTRRVHRKTKAPANLCLRKPR-GDATKNNKAAAAMTLFERLREAVFRFIMLCALSKA 60
           MAEK+RRV RK K P NLCLRKPR GDA K  K  + MTLFERLREAVFRFIMLCALSKA
Sbjct: 1   MAEKSRRVPRKIKPPPNLCLRKPRSGDAKKTTKPPSPMTLFERLREAVFRFIMLCALSKA 60

Query: 61  TNHHPAGGAAFQDDVVVRRRHAYPNVDHHHSEAVADCIEFIKMKAYSDDEIILDRGSV-D 120
           TNHHPA GA FQDDVVVRRRH+YPNVDHHHSEAVADCIEFIKMKAYSDDE+ILDRGSV D
Sbjct: 61  TNHHPAAGATFQDDVVVRRRHSYPNVDHHHSEAVADCIEFIKMKAYSDDEVILDRGSVDD 120

Query: 121 VDDDMAVSVPVPVR 133
            DDDM VSVPVPVR
Sbjct: 121 ADDDMTVSVPVPVR 134

BLAST of Cla97C01G019690 vs. NCBI nr
Match: KAA0025678.1 (Transducin/WD40 repeat-like superfamily protein [Cucumis melo var. makuwa] >TYK12553.1 Transducin/WD40 repeat-like superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 192.6 bits (488), Expect = 2.2e-45
Identity = 100/117 (85.47%), Postives = 104/117 (88.89%), Query Frame = 0

Query: 1   MAEKTRRVHRKTKAPANLCLRKPRG-DATKNNKAAAAMTLFERLREAVFRFIMLCALSKA 60
           MAEK+RRV RK K PANLCLRKPR  DA KNNK  +AMTLFERLREAVFRFIMLCALSKA
Sbjct: 1   MAEKSRRVPRKIKPPANLCLRKPRSDDAKKNNKPPSAMTLFERLREAVFRFIMLCALSKA 60

Query: 61  TNHHPAGGAAFQDDVVVRRRHAYPNVDHHHSEAVADCIEFIKMKAYSDD-EIILDRG 116
           TNHHP  GAAFQDDVVVRRRH+YPNVDHHHSEAVADCIEFIKMKAYSDD E+IL  G
Sbjct: 61  TNHHPTAGAAFQDDVVVRRRHSYPNVDHHHSEAVADCIEFIKMKAYSDDHEVILIGG 117

BLAST of Cla97C01G019690 vs. NCBI nr
Match: KAG6603914.1 (hypothetical protein SDJN03_04523, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 181.8 bits (460), Expect = 3.8e-42
Identity = 102/132 (77.27%), Postives = 106/132 (80.30%), Query Frame = 0

Query: 1   MAEKTRRVHRKTKAPANLCLRKPRGDATKNNKAAAAMTLFERLREAVFRFIMLCALSKAT 60
           MAEKTRRV  K K          RGD  KN+KA  AMTLFERLREAVFRFIMLCALSKAT
Sbjct: 1   MAEKTRRVPGKAKL---------RGDDMKNSKAPPAMTLFERLREAVFRFIMLCALSKAT 60

Query: 61  NHHPAGGAAFQDDVVVRRRHAYPNVDHHHSEAVADCIEFIKMKAYSDDEIILDRGSVDVD 120
           NHH A GA FQDD VVRRR +Y N DHHHSEAVADCIEFIK KAYSDD+IILDRGSVD D
Sbjct: 61  NHHSA-GAVFQDD-VVRRRQSYQNGDHHHSEAVADCIEFIKKKAYSDDQIILDRGSVDAD 120

Query: 121 DDMAVSVPVPVR 133
           DDMAVSVP+PVR
Sbjct: 121 DDMAVSVPLPVR 121

BLAST of Cla97C01G019690 vs. NCBI nr
Match: KAG2694204.1 (hypothetical protein I3760_08G130700 [Carya illinoinensis])

HSP 1 Score: 88.6 bits (218), Expect = 4.4e-14
Identity = 59/110 (53.64%), Postives = 69/110 (62.73%), Query Frame = 0

Query: 3   EKTRRVHRKTKAPANLCLRKPRGD---ATKNNKAAAAMTLFERLREAVFRFIMLCALSKA 62
           EK     RK K  ++LC+ + RG+   A KNNK+ + MTL ER REAV R IML ALSKA
Sbjct: 2   EKPTASPRKPKI-SSLCIPRLRGNAACANKNNKSVSPMTLLERFREAVLRLIMLSALSKA 61

Query: 63  TNHHPAGGAAFQDDVVVRRRHAYPNVDHHHSEAVADCIEFIKMKAYSDDE 110
           T+H     A  Q      RR  YPN D HHSEAVADCIEFIK  A +D+E
Sbjct: 62  TSHGTGSTADAQ-----TRRCCYPN-DSHHSEAVADCIEFIKKTASADEE 104

BLAST of Cla97C01G019690 vs. NCBI nr
Match: KAB1201821.1 (hypothetical protein CJ030_MR8G020135 [Morella rubra])

HSP 1 Score: 87.4 bits (215), Expect = 9.9e-14
Identity = 61/131 (46.56%), Postives = 75/131 (57.25%), Query Frame = 0

Query: 3   EKTRRVHRKTKAPANLCLRKPRGDATKN--NKAAAAMTLFERLREAVFRFIMLCALSKAT 62
           EK +   RK K   +LC+ + R ++  N  NKA + MTL ER REAVFR IML A+SKAT
Sbjct: 2   EKPKASPRKLK--TSLCIPRFRSNSCTNKINKAPSPMTLLERFREAVFRLIMLSAMSKAT 61

Query: 63  NHHPAGGAAFQDDVVVRRRHAYPNVDHHHSEAVADCIEFIKMKAYSDDEIILDRGSVDVD 122
           NH      A        +R  YPN D HHSEAVA+CIEFIK KA +D+E      S  + 
Sbjct: 62  NHSECSADA--------QRCYYPN-DPHHSEAVAECIEFIKKKASTDEENRDSTASSSIH 121

Query: 123 DDMAVSVPVPV 132
                 +PVPV
Sbjct: 122 GTPEAVIPVPV 121

BLAST of Cla97C01G019690 vs. ExPASy TrEMBL
Match: A0A0A0KGN3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G505880 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 4.7e-54
Identity = 114/134 (85.07%), Postives = 118/134 (88.06%), Query Frame = 0

Query: 1   MAEKTRRVHRKTKAPANLCLRKPR-GDATKNNKAAAAMTLFERLREAVFRFIMLCALSKA 60
           MAEK+RRV RK K P NLCLRKPR GDA K  K  + MTLFERLREAVFRFIMLCALSKA
Sbjct: 1   MAEKSRRVPRKIKPPPNLCLRKPRSGDAKKTTKPPSPMTLFERLREAVFRFIMLCALSKA 60

Query: 61  TNHHPAGGAAFQDDVVVRRRHAYPNVDHHHSEAVADCIEFIKMKAYSDDEIILDRGSV-D 120
           TNHHPA GA FQDDVVVRRRH+YPNVDHHHSEAVADCIEFIKMKAYSDDE+ILDRGSV D
Sbjct: 61  TNHHPAAGATFQDDVVVRRRHSYPNVDHHHSEAVADCIEFIKMKAYSDDEVILDRGSVDD 120

Query: 121 VDDDMAVSVPVPVR 133
            DDDM VSVPVPVR
Sbjct: 121 ADDDMTVSVPVPVR 134

BLAST of Cla97C01G019690 vs. ExPASy TrEMBL
Match: A0A5A7SHP0 (Transducin/WD40 repeat-like superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001350 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 1.1e-45
Identity = 100/117 (85.47%), Postives = 104/117 (88.89%), Query Frame = 0

Query: 1   MAEKTRRVHRKTKAPANLCLRKPRG-DATKNNKAAAAMTLFERLREAVFRFIMLCALSKA 60
           MAEK+RRV RK K PANLCLRKPR  DA KNNK  +AMTLFERLREAVFRFIMLCALSKA
Sbjct: 1   MAEKSRRVPRKIKPPANLCLRKPRSDDAKKNNKPPSAMTLFERLREAVFRFIMLCALSKA 60

Query: 61  TNHHPAGGAAFQDDVVVRRRHAYPNVDHHHSEAVADCIEFIKMKAYSDD-EIILDRG 116
           TNHHP  GAAFQDDVVVRRRH+YPNVDHHHSEAVADCIEFIKMKAYSDD E+IL  G
Sbjct: 61  TNHHPTAGAAFQDDVVVRRRHSYPNVDHHHSEAVADCIEFIKMKAYSDDHEVILIGG 117

BLAST of Cla97C01G019690 vs. ExPASy TrEMBL
Match: A0A6A1UNG7 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR8G020135 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 4.8e-14
Identity = 61/131 (46.56%), Postives = 75/131 (57.25%), Query Frame = 0

Query: 3   EKTRRVHRKTKAPANLCLRKPRGDATKN--NKAAAAMTLFERLREAVFRFIMLCALSKAT 62
           EK +   RK K   +LC+ + R ++  N  NKA + MTL ER REAVFR IML A+SKAT
Sbjct: 2   EKPKASPRKLK--TSLCIPRFRSNSCTNKINKAPSPMTLLERFREAVFRLIMLSAMSKAT 61

Query: 63  NHHPAGGAAFQDDVVVRRRHAYPNVDHHHSEAVADCIEFIKMKAYSDDEIILDRGSVDVD 122
           NH      A        +R  YPN D HHSEAVA+CIEFIK KA +D+E      S  + 
Sbjct: 62  NHSECSADA--------QRCYYPN-DPHHSEAVAECIEFIKKKASTDEENRDSTASSSIH 121

Query: 123 DDMAVSVPVPV 132
                 +PVPV
Sbjct: 122 GTPEAVIPVPV 121

BLAST of Cla97C01G019690 vs. ExPASy TrEMBL
Match: A0A5C7HUV3 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_015142 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 4.8e-14
Identity = 65/140 (46.43%), Postives = 73/140 (52.14%), Query Frame = 0

Query: 3   EKTRRVHRKTKAPANLC---LRKPRGDATKNNKAAAAMTLFERLREAVFRFIMLCALSKA 62
           EK R   RK K   NLC   L K   +    NK    +TL ER REAVFR IML ALSKA
Sbjct: 2   EKPRGSPRKMK--TNLCIPRLIKAGNNGRNKNKNLTPVTLLERFREAVFRLIMLSALSKA 61

Query: 63  TN---HHPAGGAAFQDDVVVRRRHAYPNVDHHHSEAVADCIEFIKMKAYSDDEIILDRG- 122
           TN   HH  G +          R  Y   D HHSEAVADCIEFIK KA +DD    + G 
Sbjct: 62  TNDHHHHTVGSSRVS-------RSYYSPADPHHSEAVADCIEFIKKKAVADDN---ENGR 121

Query: 123 ----SVDVDDDMAVSVPVPV 132
               S  +DD   + +PVPV
Sbjct: 122 DSSASTSIDDSTELIIPVPV 129

BLAST of Cla97C01G019690 vs. ExPASy TrEMBL
Match: A0A1R3IPX3 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_21914 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 3.1e-13
Identity = 54/116 (46.55%), Postives = 68/116 (58.62%), Query Frame = 0

Query: 16  ANLCLRKPRGDATKNNKAAAAMTLFERLREAVFRFIMLCALSKATNHHPAGGAAFQDDVV 75
           + LC+  PR  +   NK  + MTL +R REAVFR IML AL+KA++H     AA      
Sbjct: 4   STLCM--PRFKSNNKNKRLSPMTLLDRFREAVFRLIMLSALTKASHHQTGSTAA------ 63

Query: 76  VRRRHAYPNVDHHHSEAVADCIEFIKMKAYSDDEIILDRGSVDVDDDMAVSVPVPV 132
              R  YP  D HHSEAVADCIEFIK KAY+D+       S ++D    V++PV V
Sbjct: 64  --PRKYYP-ADAHHSEAVADCIEFIKKKAYTDENRDSSASSSNLDAASEVAMPVHV 108

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN49339.29.8e-5485.07hypothetical protein Csa_003207 [Cucumis sativus][more]
KAA0025678.12.2e-4585.47Transducin/WD40 repeat-like superfamily protein [Cucumis melo var. makuwa] >TYK1... [more]
KAG6603914.13.8e-4277.27hypothetical protein SDJN03_04523, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG2694204.14.4e-1453.64hypothetical protein I3760_08G130700 [Carya illinoinensis][more]
KAB1201821.19.9e-1446.56hypothetical protein CJ030_MR8G020135 [Morella rubra][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KGN34.7e-5485.07Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G505880 PE=4 SV=1[more]
A0A5A7SHP01.1e-4585.47Transducin/WD40 repeat-like superfamily protein OS=Cucumis melo var. makuwa OX=1... [more]
A0A6A1UNG74.8e-1446.56Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR8G020135 PE=4 SV=1[more]
A0A5C7HUV34.8e-1446.43Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_015142 PE=4 SV=1[more]
A0A1R3IPX33.1e-1346.55Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_21914 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35111:SF1EXPRESSED PROTEINcoord: 10..131
NoneNo IPR availablePANTHERPTHR35111F10A5.9-RELATEDcoord: 10..131

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C01G019690.1Cla97C01G019690.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009626 plant-type hypersensitive response
biological_process GO:2000031 regulation of salicylic acid mediated signaling pathway
biological_process GO:0010337 regulation of salicylic acid metabolic process