Cla97C01G017370 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C01G017370
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	protein RMD5 homolog
Location	Cla97Chr01: 30940268 .. 30941434 (+)
RNA-Seq Expression	Cla97C01G017370
Synteny	Cla97C01G017370

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATTGGATAGCATTAAAGATGCATTTGATCGTGTGACAAAGAAGCAGAAATTATCTTCTTCCAAAAGTCAAGAAGTAGTTGATCAGATCCATCTGGAACTGGAGCAGGTGCTACAAAAAATACAGTTAGCTGATAATCCGGAATGTCCAATTGATTTGAATTCAGTTTTTGCTGAACTCAAAACTAAATTGAAGGATATTGCCCCACTCACTCAGCTTGAAAGCACACAAAAGGAGTTGAATGCTGCTCTGACCAAGTATCCAAAGCTTGTTGAAAAATCTTTCAATGCAGATATATCAAAAGCTTATAGAAACGTTGATTTTGATAGGCATACTGTTAACCAGATAATTGCTAGTCATTTCTATCGCCAGGGTATGTTTGAACTTGGTGACTGCTTTATTAGTGAGGCTGGTGAGTCAGAATCTGCTGTCTCGTTGAGGTCTCCATTTCAGGAAATGTACCAGATCCTTGAAGCCATGAAGTCCCGGAATCTAGAGCCAGCTCTGAACTGGGCTCTGAATAACTCAAGTAAACTCAAGGAATGTGGGTCGGATCTTTTGCTAAAACTTCATAGCATGCAGTTCATGGAGATTCTACAAAAAGGAGATAGACATGACGCTTTGAAGTATGCTAGGACCTACCTGGCACCTCTTGCATCCAACCACATGGCTGAACTTCAGAAGCTTATGGCTTGCCTATTGTGGACTGGAAGGCTTGATTGCTCCCCATACTCTCATTCACAATTATTATCAGTAGCAAATTGGGATAAAGTTGCTGAGGAGCTTATAAGACAGTTCTGCAATTTTCTTGGTCAGTCCTACGAGAGCCCATTGGGTGTAACGGTTGCAGCAGGGATCCAGGGATTGCCTCCCCTCCTGAAGTTTATGAATGTCATGGCTGGGAAGAAACAGGAATGGCAATCTATGAAGCAGTTGCCTGTTCCTGTGGAGTTGGACAGAGAATTTCAGTTCCATTCCATCTTTGTTTGTCCGGTGTCGAAGGAACAGTCGACTGAAGAAAATCCTCCAATGTTAATGCTGTGTGGCCACGTCCTCTGCAAGCAGTCTATCATGAAGATGTCTAAAAACAGCACAAAATCGTTTAAGTGCCCGTATTGTCCAACAGACATTGATGCTACACGGTGTAGGCAACTGTACTTTTGA

mRNA sequence

ATGGAATTGGATAGCATTAAAGATGCATTTGATCGTGTGACAAAGAAGCAGAAATTATCTTCTTCCAAAAGTCAAGAAGTAGTTGATCAGATCCATCTGGAACTGGAGCAGGTGCTACAAAAAATACAGTTAGCTGATAATCCGGAATGTCCAATTGATTTGAATTCAGTTTTTGCTGAACTCAAAACTAAATTGAAGGATATTGCCCCACTCACTCAGCTTGAAAGCACACAAAAGGAGTTGAATGCTGCTCTGACCAAGTATCCAAAGCTTGTTGAAAAATCTTTCAATGCAGATATATCAAAAGCTTATAGAAACGTTGATTTTGATAGGCATACTGTTAACCAGATAATTGCTAGTCATTTCTATCGCCAGGGTATGTTTGAACTTGGTGACTGCTTTATTAGTGAGGCTGGTGAGTCAGAATCTGCTGTCTCGTTGAGGTCTCCATTTCAGGAAATGTACCAGATCCTTGAAGCCATGAAGTCCCGGAATCTAGAGCCAGCTCTGAACTGGGCTCTGAATAACTCAAGTAAACTCAAGGAATGTGGGTCGGATCTTTTGCTAAAACTTCATAGCATGCAGTTCATGGAGATTCTACAAAAAGGAGATAGACATGACGCTTTGAAGTATGCTAGGACCTACCTGGCACCTCTTGCATCCAACCACATGGCTGAACTTCAGAAGCTTATGGCTTGCCTATTGTGGACTGGAAGGCTTGATTGCTCCCCATACTCTCATTCACAATTATTATCAGTAGCAAATTGGGATAAAGTTGCTGAGGAGCTTATAAGACAGTTCTGCAATTTTCTTGGTCAGTCCTACGAGAGCCCATTGGGTGTAACGGTTGCAGCAGGGATCCAGGGATTGCCTCCCCTCCTGAAGTTTATGAATGTCATGGCTGGGAAGAAACAGGAATGGCAATCTATGAAGCAGTTGCCTGTTCCTGTGGAGTTGGACAGAGAATTTCAGTTCCATTCCATCTTTGTTTGTCCGGTGTCGAAGGAACAGTCGACTGAAGAAAATCCTCCAATGTTAATGCTGTGTGGCCACGTCCTCTGCAAGCAGTCTATCATGAAGATGTCTAAAAACAGCACAAAATCGTTTAAGTGCCCGTATTGTCCAACAGACATTGATGCTACACGGTGTAGGCAACTGTACTTTTGA

Coding sequence (CDS)

ATGGAATTGGATAGCATTAAAGATGCATTTGATCGTGTGACAAAGAAGCAGAAATTATCTTCTTCCAAAAGTCAAGAAGTAGTTGATCAGATCCATCTGGAACTGGAGCAGGTGCTACAAAAAATACAGTTAGCTGATAATCCGGAATGTCCAATTGATTTGAATTCAGTTTTTGCTGAACTCAAAACTAAATTGAAGGATATTGCCCCACTCACTCAGCTTGAAAGCACACAAAAGGAGTTGAATGCTGCTCTGACCAAGTATCCAAAGCTTGTTGAAAAATCTTTCAATGCAGATATATCAAAAGCTTATAGAAACGTTGATTTTGATAGGCATACTGTTAACCAGATAATTGCTAGTCATTTCTATCGCCAGGGTATGTTTGAACTTGGTGACTGCTTTATTAGTGAGGCTGGTGAGTCAGAATCTGCTGTCTCGTTGAGGTCTCCATTTCAGGAAATGTACCAGATCCTTGAAGCCATGAAGTCCCGGAATCTAGAGCCAGCTCTGAACTGGGCTCTGAATAACTCAAGTAAACTCAAGGAATGTGGGTCGGATCTTTTGCTAAAACTTCATAGCATGCAGTTCATGGAGATTCTACAAAAAGGAGATAGACATGACGCTTTGAAGTATGCTAGGACCTACCTGGCACCTCTTGCATCCAACCACATGGCTGAACTTCAGAAGCTTATGGCTTGCCTATTGTGGACTGGAAGGCTTGATTGCTCCCCATACTCTCATTCACAATTATTATCAGTAGCAAATTGGGATAAAGTTGCTGAGGAGCTTATAAGACAGTTCTGCAATTTTCTTGGTCAGTCCTACGAGAGCCCATTGGGTGTAACGGTTGCAGCAGGGATCCAGGGATTGCCTCCCCTCCTGAAGTTTATGAATGTCATGGCTGGGAAGAAACAGGAATGGCAATCTATGAAGCAGTTGCCTGTTCCTGTGGAGTTGGACAGAGAATTTCAGTTCCATTCCATCTTTGTTTGTCCGGTGTCGAAGGAACAGTCGACTGAAGAAAATCCTCCAATGTTAATGCTGTGTGGCCACGTCCTCTGCAAGCAGTCTATCATGAAGATGTCTAAAAACAGCACAAAATCGTTTAAGTGCCCGTATTGTCCAACAGACATTGATGCTACACGGTGTAGGCAACTGTACTTTTGA

Protein sequence

MELDSIKDAFDRVTKKQKLSSSKSQEVVDQIHLELEQVLQKIQLADNPECPIDLNSVFAELKTKLKDIAPLTQLESTQKELNAALTKYPKLVEKSFNADISKAYRNVDFDRHTVNQIIASHFYRQGMFELGDCFISEAGESESAVSLRSPFQEMYQILEAMKSRNLEPALNWALNNSSKLKECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRLDCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGIQGLPPLLKFMNVMAGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMKMSKNSTKSFKCPYCPTDIDATRCRQLYF

Homology

[Close]

BLAST of Cla97C01G017370 vs. NCBI nr
Match: XP_008440495.1 (PREDICTED: protein RMD5 homolog A [Cucumis melo] >XP_008440496.1 PREDICTED: protein RMD5 homolog A [Cucumis melo] >KAA0036368.1 protein RMD5-like protein A [Cucumis melo var. makuwa] >TYK12763.1 protein RMD5-like protein A [Cucumis melo var. makuwa])

HSP 1 Score: 767.3 bits (1980), Expect = 6.3e-218
Identity = 381/388 (98.20%), Postives = 386/388 (99.48%), Query Frame = 0


Query: 1   MELDSIKDAFDRVTKKQKLSSSKSQEVVDQIHLELEQVLQKIQLADNPECPIDLNSVFAE 60
           MELDSIKDAFDRVTKKQKLSSSKSQEVVD+IHLELEQVLQKIQLADNPECPIDLNSVFAE
Sbjct: 1   MELDSIKDAFDRVTKKQKLSSSKSQEVVDRIHLELEQVLQKIQLADNPECPIDLNSVFAE 60

Query: 61  LKTKLKDIAPLTQLESTQKELNAALTKYPKLVEKSFNADISKAYRNVDFDRHTVNQIIAS 120
           LKTKLKDIAPLTQL+STQKELNAALTKYPKLVEKSFN DISKAYRNVDFDRHTVNQIIAS
Sbjct: 61  LKTKLKDIAPLTQLDSTQKELNAALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS 120

Query: 121 HFYRQGMFELGDCFISEAGESESAVSLRSPFQEMYQILEAMKSRNLEPALNWALNNSSKL 180
           HFYRQGMFELGDCFISEAGESESA SLRSPFQEMYQILE+MKSRNLEPALNWALNNS+KL
Sbjct: 121 HFYRQGMFELGDCFISEAGESESAASLRSPFQEMYQILESMKSRNLEPALNWALNNSNKL 180

Query: 181 KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL 240
           KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL
Sbjct: 181 KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL 240

Query: 241 DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGIQGLPPLLKFMNVM 300
           DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAG+QGLPPLLKFMNVM
Sbjct: 241 DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM 300

Query: 301 AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360
           AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK
Sbjct: 301 AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360

Query: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 389
           MSKNSTKSFKCPYCPTDIDATRCRQLYF
Sbjct: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 388

[Close]

BLAST of Cla97C01G017370 vs. NCBI nr
Match: XP_004143429.1 (protein RMD5 homolog [Cucumis sativus] >XP_031743696.1 protein RMD5 homolog [Cucumis sativus] >KAE8647535.1 hypothetical protein Csa_003397 [Cucumis sativus])

HSP 1 Score: 763.1 bits (1969), Expect = 1.2e-216
Identity = 378/388 (97.42%), Postives = 384/388 (98.97%), Query Frame = 0


Query: 1   MELDSIKDAFDRVTKKQKLSSSKSQEVVDQIHLELEQVLQKIQLADNPECPIDLNSVFAE 60
           MELDSIKDAFDRVTKKQKLSSSKSQEVVDQ+HLELEQVLQKIQLADNPECPID+NSVFA 
Sbjct: 1   MELDSIKDAFDRVTKKQKLSSSKSQEVVDQMHLELEQVLQKIQLADNPECPIDMNSVFAA 60

Query: 61  LKTKLKDIAPLTQLESTQKELNAALTKYPKLVEKSFNADISKAYRNVDFDRHTVNQIIAS 120
           LKTKLKDIAPLTQLESTQKELN ALTKYPKLVEKSFN DISKAYRNVDFDRHTVNQIIAS
Sbjct: 61  LKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS 120

Query: 121 HFYRQGMFELGDCFISEAGESESAVSLRSPFQEMYQILEAMKSRNLEPALNWALNNSSKL 180
           HFYRQGMFELGDCFISEAGESESA SLRSPFQEMYQILE+MKSRNLEPALNWALNNS+KL
Sbjct: 121 HFYRQGMFELGDCFISEAGESESAASLRSPFQEMYQILESMKSRNLEPALNWALNNSNKL 180

Query: 181 KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL 240
           K+CGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL
Sbjct: 181 KDCGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL 240

Query: 241 DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGIQGLPPLLKFMNVM 300
           DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAG+QGLPPLLKFMNVM
Sbjct: 241 DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM 300

Query: 301 AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360
           AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK
Sbjct: 301 AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360

Query: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 389
           MSKNSTKSFKCPYCPTDIDATRCRQLYF
Sbjct: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 388

[Close]

BLAST of Cla97C01G017370 vs. NCBI nr
Match: XP_038883497.1 (protein RMD5 homolog [Benincasa hispida] >XP_038883498.1 protein RMD5 homolog [Benincasa hispida] >XP_038883499.1 protein RMD5 homolog [Benincasa hispida])

HSP 1 Score: 761.1 bits (1964), Expect = 4.5e-216
Identity = 379/388 (97.68%), Postives = 383/388 (98.71%), Query Frame = 0


Query: 1   MELDSIKDAFDRVTKKQKLSSSKSQEVVDQIHLELEQVLQKIQLADNPECPIDLNSVFAE 60
           MELDSIKDAFDRVTKKQKLSSSKSQEV D+IHLELEQVLQKIQLADNPECPIDL+SV AE
Sbjct: 1   MELDSIKDAFDRVTKKQKLSSSKSQEVADKIHLELEQVLQKIQLADNPECPIDLSSVAAE 60

Query: 61  LKTKLKDIAPLTQLESTQKELNAALTKYPKLVEKSFNADISKAYRNVDFDRHTVNQIIAS 120
           LK KLKDIAPLTQLESTQKELNAALTKYPKLVEKSFN DISKAYRNVDFDRHTVNQIIAS
Sbjct: 61  LKAKLKDIAPLTQLESTQKELNAALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS 120

Query: 121 HFYRQGMFELGDCFISEAGESESAVSLRSPFQEMYQILEAMKSRNLEPALNWALNNSSKL 180
           HFYRQGMFELGDCFISEAGESESA SLRSPFQEMYQILEAMKSRNLEPALNWALNNS+KL
Sbjct: 121 HFYRQGMFELGDCFISEAGESESAASLRSPFQEMYQILEAMKSRNLEPALNWALNNSNKL 180

Query: 181 KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL 240
           KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL
Sbjct: 181 KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL 240

Query: 241 DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGIQGLPPLLKFMNVM 300
           DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAG+QGLPPLLKFMNVM
Sbjct: 241 DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM 300

Query: 301 AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360
           AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK
Sbjct: 301 AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360

Query: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 389
           MSKNSTKSFKCPYCPTDIDATRCRQLYF
Sbjct: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 388

[Close]

BLAST of Cla97C01G017370 vs. NCBI nr
Match: XP_022132999.1 (protein RMD5 homolog A-like [Momordica charantia] >XP_022133000.1 protein RMD5 homolog A-like [Momordica charantia])

HSP 1 Score: 755.7 bits (1950), Expect = 1.9e-214
Identity = 372/388 (95.88%), Postives = 381/388 (98.20%), Query Frame = 0


Query: 1   MELDSIKDAFDRVTKKQKLSSSKSQEVVDQIHLELEQVLQKIQLADNPECPIDLNSVFAE 60
           MELDSIKD FDRVTKKQKLSSSKSQEV+DQIHLELEQVLQK+QLADNPECPIDLNSVF+E
Sbjct: 1   MELDSIKDVFDRVTKKQKLSSSKSQEVIDQIHLELEQVLQKVQLADNPECPIDLNSVFSE 60

Query: 61  LKTKLKDIAPLTQLESTQKELNAALTKYPKLVEKSFNADISKAYRNVDFDRHTVNQIIAS 120
           LKTKLKDIAPLTQLESTQKELN AL+KYPKL+EKSFN DISKAYRNVDFDRHTVNQIIAS
Sbjct: 61  LKTKLKDIAPLTQLESTQKELNVALSKYPKLIEKSFNPDISKAYRNVDFDRHTVNQIIAS 120

Query: 121 HFYRQGMFELGDCFISEAGESESAVSLRSPFQEMYQILEAMKSRNLEPALNWALNNSSKL 180
           HFYRQGMFELGDCFI+EAGESESA S+RSPFQEMYQILEAMKSRNLEPALNWALNNSSKL
Sbjct: 121 HFYRQGMFELGDCFINEAGESESAASMRSPFQEMYQILEAMKSRNLEPALNWALNNSSKL 180

Query: 181 KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL 240
           KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL
Sbjct: 181 KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL 240

Query: 241 DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGIQGLPPLLKFMNVM 300
           DCSPYS SQLLS  NW+KVAEELIRQFCNFLGQSYESPLGVTVAAG+QGLPPLLKFMNVM
Sbjct: 241 DCSPYSQSQLLSATNWEKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM 300

Query: 301 AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360
           AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK
Sbjct: 301 AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360

Query: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 389
           MSKNSTKSFKCPYCPTDIDATRCRQLYF
Sbjct: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 388

[Close]

BLAST of Cla97C01G017370 vs. NCBI nr
Match: XP_022963019.1 (protein RMD5 homolog [Cucurbita moschata] >XP_022963020.1 protein RMD5 homolog [Cucurbita moschata] >XP_022963021.1 protein RMD5 homolog [Cucurbita moschata] >XP_022963022.1 protein RMD5 homolog [Cucurbita moschata] >XP_022963023.1 protein RMD5 homolog [Cucurbita moschata] >XP_023517860.1 protein RMD5 homolog [Cucurbita pepo subsp. pepo] >XP_023517861.1 protein RMD5 homolog [Cucurbita pepo subsp. pepo] >XP_023517862.1 protein RMD5 homolog [Cucurbita pepo subsp. pepo] >KAG7026890.1 Protein RMD5-like A, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 748.0 bits (1930), Expect = 4.0e-212
Identity = 370/388 (95.36%), Postives = 378/388 (97.42%), Query Frame = 0


Query: 1   MELDSIKDAFDRVTKKQKLSSSKSQEVVDQIHLELEQVLQKIQLADNPECPIDLNSVFAE 60
           MELDSIKDAFDRVTKKQKLSSSKS EVVDQIHLELEQVLQKIQLADNPECP+DL SVF+E
Sbjct: 1   MELDSIKDAFDRVTKKQKLSSSKSHEVVDQIHLELEQVLQKIQLADNPECPVDLKSVFSE 60

Query: 61  LKTKLKDIAPLTQLESTQKELNAALTKYPKLVEKSFNADISKAYRNVDFDRHTVNQIIAS 120
           LKTKLKDIAPLTQLESTQKELN ALTKYPKLVEKSFN DISKAYRNVDFDRHTVNQIIAS
Sbjct: 61  LKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS 120

Query: 121 HFYRQGMFELGDCFISEAGESESAVSLRSPFQEMYQILEAMKSRNLEPALNWALNNSSKL 180
           HFYRQGMFELGDCFISEAGESESA S+RSPFQEMYQILEAMKSRNL+PALNWALNNS+KL
Sbjct: 121 HFYRQGMFELGDCFISEAGESESAASMRSPFQEMYQILEAMKSRNLDPALNWALNNSNKL 180

Query: 181 KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL 240
            ECGSDLLLKLHSMQFMEILQ GDRHDALKYARTYLAPLASNH+AELQKLMACLLWTGRL
Sbjct: 181 NECGSDLLLKLHSMQFMEILQNGDRHDALKYARTYLAPLASNHLAELQKLMACLLWTGRL 240

Query: 241 DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGIQGLPPLLKFMNVM 300
           DCSPYS SQLLSV NW+KVAEELIRQFCNFLGQSYESPLGVTVAAG+QGLPPLLKFMNVM
Sbjct: 241 DCSPYSQSQLLSVTNWEKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM 300

Query: 301 AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360
           AGKKQEWQSMKQLPVPVEL REFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK
Sbjct: 301 AGKKQEWQSMKQLPVPVELGREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360

Query: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 389
           MSKNSTKSFKCPYCPTDIDATRCRQLYF
Sbjct: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 388

[Close]

BLAST of Cla97C01G017370 vs. ExPASy Swiss-Prot
Match: Q9T075 (Protein RMD5 homolog OS=Arabidopsis thaliana OX=3702 GN=RMD5 PE=1 SV=1)

HSP 1 Score: 460.3 bits (1183), Expect = 2.2e-128
Identity = 235/392 (59.95%), Postives = 300/392 (76.53%), Query Frame = 0


Query: 1   MELDSIKDAFDRVTKKQKLSSSKSQEVVDQIHLELEQVLQKIQLADNPECP-IDLNSVFA 60
           MEL SIKDAFDRV  KQKLS SK+ E+V  +  E+++ L  ++   + +   +D  S+ A
Sbjct: 1   MELKSIKDAFDRVATKQKLSYSKTNEIVHMLSQEIDKALSILEETPSSDTMLLDHRSILA 60

Query: 61  ELKTKLKDIAPLTQLESTQKELNAALTKYPKLVEKSFNADISKAYR-NVDFDRHTVNQII 120
           ++K    +IAP+TQLE+T+KEL+AALTKYPK++EK  N DISKAYR NV+FD H VNQII
Sbjct: 61  DVKKVFMEIAPITQLEATEKELHAALTKYPKVLEKQLNPDISKAYRHNVEFDTHIVNQII 120

Query: 121 ASHFYRQGMFELGDCFISEAGESESAVSLRSPFQEMYQILEAMKSRNLEPALNWALNNSS 180
           A+ FYRQGMF++GDCF++E GESE   S R  F EMY+ILEAMK R+LEPALNWA++NS 
Sbjct: 121 ANFFYRQGMFDIGDCFVAETGESE--CSTRQSFVEMYRILEAMKRRDLEPALNWAVSNSD 180

Query: 181 KLKECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTG 240
           KLKE  SDL +KLHS+ F+EI +  +  +A+ YAR ++A  A + + E+QKLM  LLW  
Sbjct: 181 KLKEARSDLEMKLHSLHFLEIARGKNSKEAIDYARKHIATFADSCLPEIQKLMCSLLWNR 240

Query: 241 RLDCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGIQGLPPLLKFMN 300
           +LD SPY  S+ LS A W+   +EL RQ+CN LG+S ESPL +TV AG Q LP LLK+MN
Sbjct: 241 KLDKSPY--SEFLSPALWNNAVKELTRQYCNLLGESSESPLSITVTAGTQALPVLLKYMN 300

Query: 301 -VMAGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQS 360
            VMA KK +WQ+M+QLPV  +L  EFQFHS+FVCPVSKEQS+++NPPM+M CGHVLCKQ+
Sbjct: 301 VVMANKKLDWQTMEQLPVDAQLSEEFQFHSVFVCPVSKEQSSDDNPPMMMSCGHVLCKQT 360

Query: 361 IMKMSKNSTK-SFKCPYCPTDIDATRCRQLYF 389
           I KMSKN +K SFKCPYCPTD+D +RCRQL+F
Sbjct: 361 INKMSKNGSKSSFKCPYCPTDVDISRCRQLHF 388

[Close]

BLAST of Cla97C01G017370 vs. ExPASy Swiss-Prot
Match: Q640V2 (E3 ubiquitin-protein ligase RMND5A OS=Xenopus tropicalis OX=8364 GN=rmnd5a PE=2 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 1.1e-52
Identity = 117/343 (34.11%), Postives = 199/343 (58.02%), Query Frame = 0


Query: 54  LNSVFAELKTKLKDIAPLTQLESTQKELNAALTKYPKLVEKSFNADISKAYRN---VDFD 113
           L+ V  +   ++KD   + +L S  K++++++++  K ++K+F+ADIS    +    +  
Sbjct: 57  LSLVLTQCCKRIKD--TVQKLASDHKDIHSSVSRVGKAIDKNFDADISSVGIDGCWQNDS 116

Query: 114 RHTVNQIIASHFYRQGMFELGDCFISEAGESESAVSLRSPFQEMYQILEAMKSRNLEPAL 173
           +  +++++  HF+RQGM ++ +    EAG S  A S + PF E+ +ILEA+K R L PAL
Sbjct: 117 QQILSEVMVEHFFRQGMLDVAEELCQEAGLSIDA-SQKEPFVELNRILEALKVRVLRPAL 176

Query: 174 NWALNNSSKLKECGSDLLLKLHSMQFMEILQKG--DRHDALKYARTYLAPLASNHMAELQ 233
            WA++N   L    S L  KLH + F+ +L  G  ++ +AL+YA+ +  P A NH  ++Q
Sbjct: 177 EWAVSNREMLMAQNSSLEFKLHRLYFISLLMGGTVNQREALQYAKNF-QPFAENHQKDIQ 236

Query: 234 KLMACLLWTGR-LDCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGI 293
            LM  L++  + ++ SPY H  LL    W  + +   R  C  LG S ESPL V+ +AG 
Sbjct: 237 VLMGSLVYLRQGIENSPYVH--LLDANQWADICDIFTRDACALLGLSVESPLSVSFSAGC 296

Query: 294 QGLPPLLKFMNVMAGKK--QEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPM 353
             LP L+    V+  ++    W    +LP+ V+L ++  +HSIF CP+ ++Q+T+ NPPM
Sbjct: 297 VALPALINIKAVIEQRQCTGVWNQKDELPIEVDLGKKCWYHSIFACPILRQQTTDNNPPM 356

Query: 354 LMLCGHVLCKQSIMKMSKNSTKSFKCPYCPTDIDATRCRQLYF 389
            ++CGH++ + ++ KM   S    KCPYCP +      +Q++F
Sbjct: 357 KLVCGHIISRDALNKMFNGS--KLKCPYCPMEQSPGDAKQIFF 391

[Close]

BLAST of Cla97C01G017370 vs. ExPASy Swiss-Prot
Match: Q6GLP4 (E3 ubiquitin-protein ligase RMND5A OS=Xenopus laevis OX=8355 GN=rmnd5a PE=1 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.9e-52
Identity = 124/381 (32.55%), Postives = 213/381 (55.91%), Query Frame = 0


Query: 18  KLSSSKSQEVVDQIHLELEQVLQKIQLADNPECPIDLNSVFAELKTKLKDIAPLTQLEST 77
           +L     +E++D       ++LQ  +   + E    L+ V  +   ++KD   + +L S 
Sbjct: 23  QLCERSLEELIDYAGGLRREILQAAE--QDGELSGTLSLVLTQCCKRIKD--TVQKLASD 82

Query: 78  QKELNAALTKYPKLVEKSFNADISKAYRNVD-----FDRHTVNQIIASHFYRQGMFELGD 137
            K++++++++  K ++K+F+ADIS     +D       +  +++++  HF+RQGM ++ +
Sbjct: 83  HKDIHSSVSRVGKAIDKNFDADISSV--GIDGCWQTDSQRILSEVMVEHFFRQGMLDVAE 142

Query: 138 CFISEAGESESAVSLRSPFQEMYQILEAMKSRNLEPALNWALNNSSKLKECGSDLLLKLH 197
               EA  S  A S + PF E+ +ILEA+K R L PAL WA++N   L    S L  KLH
Sbjct: 143 ELCQEASLSIDA-SQKEPFVELNRILEALKVRVLRPALEWAVSNREMLMAQNSSLEFKLH 202

Query: 198 SMQFMEILQKG--DRHDALKYARTYLAPLASNHMAELQKLMACLLWTGR-LDCSPYSHSQ 257
            + F+ +L  G  ++ +AL+YA+ +  P A NH  ++Q LM  L++  + ++ SPY H  
Sbjct: 203 RLYFISLLMGGTVNQQEALQYAKNF-QPFAENHQKDIQVLMGSLVYLRQGIENSPYVH-- 262

Query: 258 LLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGIQGLPPLLKFMNVMAGKKQE--W 317
           LL    W  + +   R  C+ LG S ESPL V+ +AG   LP L+    V+  ++    W
Sbjct: 263 LLDANQWADICDIFTRDACSLLGLSVESPLSVSFSAGCVALPALINIKAVIEQRQCSGVW 322

Query: 318 QSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMKMSKNSTK 377
               +LP+ V+L ++  +HSIF CP+ ++Q+TE NPPM ++CGH++ + ++ KM   S  
Sbjct: 323 NQKDELPIEVDLGKKCWYHSIFACPILRQQTTENNPPMKLVCGHIISRDALNKMFNGS-- 382

Query: 378 SFKCPYCPTDIDATRCRQLYF 389
             KCPYCP +      +Q++F
Sbjct: 383 KLKCPYCPMEQSPGDAKQIFF 391

[Close]

BLAST of Cla97C01G017370 vs. ExPASy Swiss-Prot
Match: O59668 (LisH domain-containing protein C29A3.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC29A3.03c PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 2.5e-52
Identity = 117/339 (34.51%), Postives = 182/339 (53.69%), Query Frame = 0


Query: 74  LESTQKELNAALTKYPKLVEKSFNADIS--KAYRNVDFDRHTVNQIIASHFYRQGMFELG 133
           L+ T+K+ + +L ++ K +EK FN D+   K + + +  +  ++  ++ HF+RQG  EL 
Sbjct: 61  LKRTEKKFHTSLNRFGKTLEKKFNFDLEDIKLHSSFESKKREIDTALSLHFFRQGDVELA 120

Query: 134 DCFISEAGESESAVSLRSPFQEMYQILEAMKSRNLEPALNWALNNSSKLKECGSDLLLKL 193
             F  EAG  E + SL   F  +  I++ ++ ++L+  + WA      L+  GS L   L
Sbjct: 121 HLFCKEAGIEEPSESLH-VFTLLKSIVQGIRDKDLKLPIEWASQCRGYLERKGSSLEYTL 180

Query: 194 HSMQFM-EILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGR---LDCSPYSH 253
              + +   L   D   A++Y RT +A     H+A++QK M  L +  R   L  +  SH
Sbjct: 181 QKYRLVSNYLTTKDIMAAIRYCRTNMAEFQKKHLADIQKTMIALFFCSRNEVLSGTNDSH 240

Query: 254 SQLLSV------------------ANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGIQG 313
             +  +                   +W  +    +R+FC  LG S ESPL + V AG   
Sbjct: 241 DSIHHIISNNAQLNIPQEYIDVLDLDWKSLELLFVREFCAALGMSLESPLDIVVNAGAIA 300

Query: 314 LPPLLKFMNVMAGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLC 373
           LP LLK  ++M  K  EW S  +LPV + L   + FHS+F CPVSKEQ+TEENPPM+M C
Sbjct: 301 LPILLKMSSIMKKKHTEWTSQGELPVEIFLPSSYHFHSVFTCPVSKEQATEENPPMMMSC 360

Query: 374 GHVLCKQSIMKMSKNSTKSFKCPYCPTDIDATRCRQLYF 389
           GHV+ K+S+ ++S+N ++ FKCPYCP +  A    ++YF
Sbjct: 361 GHVIVKESLRQLSRNGSQRFKCPYCPNENVAADAIRVYF 398

[Close]

BLAST of Cla97C01G017370 vs. ExPASy Swiss-Prot
Match: Q9H871 (E3 ubiquitin-protein transferase RMND5A OS=Homo sapiens OX=9606 GN=RMND5A PE=1 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 9.6e-52
Identity = 116/345 (33.62%), Postives = 198/345 (57.39%), Query Frame = 0


Query: 54  LNSVFAELKTKLKDIAPLTQLESTQKELNAALTKYPKLVEKSFNADISKAYRNVD----- 113
           L+ V  +   ++KD   + +L S  K++++++++  K ++K+F++DIS     +D     
Sbjct: 57  LSLVLTQCCKRIKD--TVQKLASDHKDIHSSVSRVGKAIDKNFDSDISSV--GIDGCWQA 116

Query: 114 FDRHTVNQIIASHFYRQGMFELGDCFISEAGESESAVSLRSPFQEMYQILEAMKSRNLEP 173
             +  +N+++  HF+RQGM ++ +    E+G S    S + PF E+ +ILEA+K R L P
Sbjct: 117 DSQRLLNEVMVEHFFRQGMLDVAEELCQESGLSVDP-SQKEPFVELNRILEALKVRVLRP 176

Query: 174 ALNWALNNSSKLKECGSDLLLKLHSMQFMEILQKG--DRHDALKYARTYLAPLASNHMAE 233
           AL WA++N   L    S L  KLH + F+ +L  G  ++ +AL+YA+ +  P A NH  +
Sbjct: 177 ALEWAVSNREMLIAQNSSLEFKLHRLYFISLLMGGTTNQREALQYAKNF-QPFALNHQKD 236

Query: 234 LQKLMACLLWTGR-LDCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAA 293
           +Q LM  L++  + ++ SPY H  LL    W  + +   R  C  LG S ESPL V+ +A
Sbjct: 237 IQVLMGSLVYLRQGIENSPYVH--LLDANQWADICDIFTRDACALLGLSVESPLSVSFSA 296

Query: 294 GIQGLPPLLKFMNVMAGKK--QEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENP 353
           G   LP L+    V+  ++    W    +LP+ V+L ++  +HSIF CP+ ++Q+T+ NP
Sbjct: 297 GCVALPALINIKAVIEQRQCTGVWNQKDELPIEVDLGKKCWYHSIFACPILRQQTTDNNP 356

Query: 354 PMLMLCGHVLCKQSIMKMSKNSTKSFKCPYCPTDIDATRCRQLYF 389
           PM ++CGH++ + ++ KM   S    KCPYCP +      +Q++F
Sbjct: 357 PMKLVCGHIISRDALNKMFNGS--KLKCPYCPMEQSPGDAKQIFF 391

[Close]

BLAST of Cla97C01G017370 vs. ExPASy TrEMBL
Match: A0A1S3B0U3 (protein RMD5 homolog A OS=Cucumis melo OX=3656 GN=LOC103484906 PE=4 SV=1)

HSP 1 Score: 767.3 bits (1980), Expect = 3.0e-218
Identity = 381/388 (98.20%), Postives = 386/388 (99.48%), Query Frame = 0


Query: 1   MELDSIKDAFDRVTKKQKLSSSKSQEVVDQIHLELEQVLQKIQLADNPECPIDLNSVFAE 60
           MELDSIKDAFDRVTKKQKLSSSKSQEVVD+IHLELEQVLQKIQLADNPECPIDLNSVFAE
Sbjct: 1   MELDSIKDAFDRVTKKQKLSSSKSQEVVDRIHLELEQVLQKIQLADNPECPIDLNSVFAE 60

Query: 61  LKTKLKDIAPLTQLESTQKELNAALTKYPKLVEKSFNADISKAYRNVDFDRHTVNQIIAS 120
           LKTKLKDIAPLTQL+STQKELNAALTKYPKLVEKSFN DISKAYRNVDFDRHTVNQIIAS
Sbjct: 61  LKTKLKDIAPLTQLDSTQKELNAALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS 120

Query: 121 HFYRQGMFELGDCFISEAGESESAVSLRSPFQEMYQILEAMKSRNLEPALNWALNNSSKL 180
           HFYRQGMFELGDCFISEAGESESA SLRSPFQEMYQILE+MKSRNLEPALNWALNNS+KL
Sbjct: 121 HFYRQGMFELGDCFISEAGESESAASLRSPFQEMYQILESMKSRNLEPALNWALNNSNKL 180

Query: 181 KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL 240
           KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL
Sbjct: 181 KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL 240

Query: 241 DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGIQGLPPLLKFMNVM 300
           DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAG+QGLPPLLKFMNVM
Sbjct: 241 DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM 300

Query: 301 AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360
           AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK
Sbjct: 301 AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360

Query: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 389
           MSKNSTKSFKCPYCPTDIDATRCRQLYF
Sbjct: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 388

[Close]

BLAST of Cla97C01G017370 vs. ExPASy TrEMBL
Match: A0A5D3CLJ0 (Protein RMD5-like protein A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G003520 PE=4 SV=1)

HSP 1 Score: 767.3 bits (1980), Expect = 3.0e-218
Identity = 381/388 (98.20%), Postives = 386/388 (99.48%), Query Frame = 0


Query: 1   MELDSIKDAFDRVTKKQKLSSSKSQEVVDQIHLELEQVLQKIQLADNPECPIDLNSVFAE 60
           MELDSIKDAFDRVTKKQKLSSSKSQEVVD+IHLELEQVLQKIQLADNPECPIDLNSVFAE
Sbjct: 1   MELDSIKDAFDRVTKKQKLSSSKSQEVVDRIHLELEQVLQKIQLADNPECPIDLNSVFAE 60

Query: 61  LKTKLKDIAPLTQLESTQKELNAALTKYPKLVEKSFNADISKAYRNVDFDRHTVNQIIAS 120
           LKTKLKDIAPLTQL+STQKELNAALTKYPKLVEKSFN DISKAYRNVDFDRHTVNQIIAS
Sbjct: 61  LKTKLKDIAPLTQLDSTQKELNAALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS 120

Query: 121 HFYRQGMFELGDCFISEAGESESAVSLRSPFQEMYQILEAMKSRNLEPALNWALNNSSKL 180
           HFYRQGMFELGDCFISEAGESESA SLRSPFQEMYQILE+MKSRNLEPALNWALNNS+KL
Sbjct: 121 HFYRQGMFELGDCFISEAGESESAASLRSPFQEMYQILESMKSRNLEPALNWALNNSNKL 180

Query: 181 KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL 240
           KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL
Sbjct: 181 KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL 240

Query: 241 DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGIQGLPPLLKFMNVM 300
           DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAG+QGLPPLLKFMNVM
Sbjct: 241 DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM 300

Query: 301 AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360
           AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK
Sbjct: 301 AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360

Query: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 389
           MSKNSTKSFKCPYCPTDIDATRCRQLYF
Sbjct: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 388

[Close]

BLAST of Cla97C01G017370 vs. ExPASy TrEMBL
Match: A0A6J1BU35 (protein RMD5 homolog A-like OS=Momordica charantia OX=3673 GN=LOC111005703 PE=4 SV=1)

HSP 1 Score: 755.7 bits (1950), Expect = 9.2e-215
Identity = 372/388 (95.88%), Postives = 381/388 (98.20%), Query Frame = 0


Query: 1   MELDSIKDAFDRVTKKQKLSSSKSQEVVDQIHLELEQVLQKIQLADNPECPIDLNSVFAE 60
           MELDSIKD FDRVTKKQKLSSSKSQEV+DQIHLELEQVLQK+QLADNPECPIDLNSVF+E
Sbjct: 1   MELDSIKDVFDRVTKKQKLSSSKSQEVIDQIHLELEQVLQKVQLADNPECPIDLNSVFSE 60

Query: 61  LKTKLKDIAPLTQLESTQKELNAALTKYPKLVEKSFNADISKAYRNVDFDRHTVNQIIAS 120
           LKTKLKDIAPLTQLESTQKELN AL+KYPKL+EKSFN DISKAYRNVDFDRHTVNQIIAS
Sbjct: 61  LKTKLKDIAPLTQLESTQKELNVALSKYPKLIEKSFNPDISKAYRNVDFDRHTVNQIIAS 120

Query: 121 HFYRQGMFELGDCFISEAGESESAVSLRSPFQEMYQILEAMKSRNLEPALNWALNNSSKL 180
           HFYRQGMFELGDCFI+EAGESESA S+RSPFQEMYQILEAMKSRNLEPALNWALNNSSKL
Sbjct: 121 HFYRQGMFELGDCFINEAGESESAASMRSPFQEMYQILEAMKSRNLEPALNWALNNSSKL 180

Query: 181 KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL 240
           KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL
Sbjct: 181 KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL 240

Query: 241 DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGIQGLPPLLKFMNVM 300
           DCSPYS SQLLS  NW+KVAEELIRQFCNFLGQSYESPLGVTVAAG+QGLPPLLKFMNVM
Sbjct: 241 DCSPYSQSQLLSATNWEKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM 300

Query: 301 AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360
           AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK
Sbjct: 301 AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360

Query: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 389
           MSKNSTKSFKCPYCPTDIDATRCRQLYF
Sbjct: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 388

[Close]

BLAST of Cla97C01G017370 vs. ExPASy TrEMBL
Match: A0A6J1HGI0 (protein RMD5 homolog OS=Cucurbita moschata OX=3662 GN=LOC111463351 PE=4 SV=1)

HSP 1 Score: 748.0 bits (1930), Expect = 1.9e-212
Identity = 370/388 (95.36%), Postives = 378/388 (97.42%), Query Frame = 0


Query: 1   MELDSIKDAFDRVTKKQKLSSSKSQEVVDQIHLELEQVLQKIQLADNPECPIDLNSVFAE 60
           MELDSIKDAFDRVTKKQKLSSSKS EVVDQIHLELEQVLQKIQLADNPECP+DL SVF+E
Sbjct: 1   MELDSIKDAFDRVTKKQKLSSSKSHEVVDQIHLELEQVLQKIQLADNPECPVDLKSVFSE 60

Query: 61  LKTKLKDIAPLTQLESTQKELNAALTKYPKLVEKSFNADISKAYRNVDFDRHTVNQIIAS 120
           LKTKLKDIAPLTQLESTQKELN ALTKYPKLVEKSFN DISKAYRNVDFDRHTVNQIIAS
Sbjct: 61  LKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS 120

Query: 121 HFYRQGMFELGDCFISEAGESESAVSLRSPFQEMYQILEAMKSRNLEPALNWALNNSSKL 180
           HFYRQGMFELGDCFISEAGESESA S+RSPFQEMYQILEAMKSRNL+PALNWALNNS+KL
Sbjct: 121 HFYRQGMFELGDCFISEAGESESAASMRSPFQEMYQILEAMKSRNLDPALNWALNNSNKL 180

Query: 181 KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL 240
            ECGSDLLLKLHSMQFMEILQ GDRHDALKYARTYLAPLASNH+AELQKLMACLLWTGRL
Sbjct: 181 NECGSDLLLKLHSMQFMEILQNGDRHDALKYARTYLAPLASNHLAELQKLMACLLWTGRL 240

Query: 241 DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGIQGLPPLLKFMNVM 300
           DCSPYS SQLLSV NW+KVAEELIRQFCNFLGQSYESPLGVTVAAG+QGLPPLLKFMNVM
Sbjct: 241 DCSPYSQSQLLSVTNWEKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM 300

Query: 301 AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360
           AGKKQEWQSMKQLPVPVEL REFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK
Sbjct: 301 AGKKQEWQSMKQLPVPVELGREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360

Query: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 389
           MSKNSTKSFKCPYCPTDIDATRCRQLYF
Sbjct: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 388

[Close]

BLAST of Cla97C01G017370 vs. ExPASy TrEMBL
Match: A0A6J1KU15 (protein RMD5 homolog OS=Cucurbita maxima OX=3661 GN=LOC111497206 PE=4 SV=1)

HSP 1 Score: 744.2 bits (1920), Expect = 2.8e-211
Identity = 368/388 (94.85%), Postives = 377/388 (97.16%), Query Frame = 0


Query: 1   MELDSIKDAFDRVTKKQKLSSSKSQEVVDQIHLELEQVLQKIQLADNPECPIDLNSVFAE 60
           MELDSIKDAFDRVTKKQKLSSSKS EVVDQIHLELEQVLQKIQLADNPECP++L SVF+E
Sbjct: 1   MELDSIKDAFDRVTKKQKLSSSKSHEVVDQIHLELEQVLQKIQLADNPECPVNLKSVFSE 60

Query: 61  LKTKLKDIAPLTQLESTQKELNAALTKYPKLVEKSFNADISKAYRNVDFDRHTVNQIIAS 120
           LKTKLKDIAPLTQLESTQKELN ALTKYPKLVEKSFN DISKAYRNVDFDRHTVNQIIAS
Sbjct: 61  LKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS 120

Query: 121 HFYRQGMFELGDCFISEAGESESAVSLRSPFQEMYQILEAMKSRNLEPALNWALNNSSKL 180
           HFYRQGMFELGDCFISEAGESESA S+RSPFQEMYQILEAMKSRNL+PALNWALNNS+KL
Sbjct: 121 HFYRQGMFELGDCFISEAGESESAASMRSPFQEMYQILEAMKSRNLDPALNWALNNSNKL 180

Query: 181 KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL 240
            ECGSDLLLKLHSMQFMEILQ GDRHDALKYARTYLAPLASNH+AELQKLMACLLWTGRL
Sbjct: 181 NECGSDLLLKLHSMQFMEILQNGDRHDALKYARTYLAPLASNHLAELQKLMACLLWTGRL 240

Query: 241 DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGIQGLPPLLKFMNVM 300
           DCSPYS SQLLSV NW+ VAEELIRQFCNFLGQSYESPLGVTVAAG+QGLPPLLKFMNVM
Sbjct: 241 DCSPYSQSQLLSVTNWENVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM 300

Query: 301 AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360
           AGKKQEWQSMKQLPVPVEL REFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK
Sbjct: 301 AGKKQEWQSMKQLPVPVELGREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360

Query: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 389
           MSKNSTKSFKCPYCPTDIDATRCRQLYF
Sbjct: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 388

[Close]

BLAST of Cla97C01G017370 vs. TAIR 10
Match: AT4G37880.1 (LisH/CRA/RING-U-box domains-containing protein )

HSP 1 Score: 460.3 bits (1183), Expect = 1.5e-129
Identity = 235/392 (59.95%), Postives = 300/392 (76.53%), Query Frame = 0


Query: 1   MELDSIKDAFDRVTKKQKLSSSKSQEVVDQIHLELEQVLQKIQLADNPECP-IDLNSVFA 60
           MEL SIKDAFDRV  KQKLS SK+ E+V  +  E+++ L  ++   + +   +D  S+ A
Sbjct: 1   MELKSIKDAFDRVATKQKLSYSKTNEIVHMLSQEIDKALSILEETPSSDTMLLDHRSILA 60

Query: 61  ELKTKLKDIAPLTQLESTQKELNAALTKYPKLVEKSFNADISKAYR-NVDFDRHTVNQII 120
           ++K    +IAP+TQLE+T+KEL+AALTKYPK++EK  N DISKAYR NV+FD H VNQII
Sbjct: 61  DVKKVFMEIAPITQLEATEKELHAALTKYPKVLEKQLNPDISKAYRHNVEFDTHIVNQII 120

Query: 121 ASHFYRQGMFELGDCFISEAGESESAVSLRSPFQEMYQILEAMKSRNLEPALNWALNNSS 180
           A+ FYRQGMF++GDCF++E GESE   S R  F EMY+ILEAMK R+LEPALNWA++NS 
Sbjct: 121 ANFFYRQGMFDIGDCFVAETGESE--CSTRQSFVEMYRILEAMKRRDLEPALNWAVSNSD 180

Query: 181 KLKECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTG 240
           KLKE  SDL +KLHS+ F+EI +  +  +A+ YAR ++A  A + + E+QKLM  LLW  
Sbjct: 181 KLKEARSDLEMKLHSLHFLEIARGKNSKEAIDYARKHIATFADSCLPEIQKLMCSLLWNR 240

Query: 241 RLDCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGIQGLPPLLKFMN 300
           +LD SPY  S+ LS A W+   +EL RQ+CN LG+S ESPL +TV AG Q LP LLK+MN
Sbjct: 241 KLDKSPY--SEFLSPALWNNAVKELTRQYCNLLGESSESPLSITVTAGTQALPVLLKYMN 300

Query: 301 -VMAGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQS 360
            VMA KK +WQ+M+QLPV  +L  EFQFHS+FVCPVSKEQS+++NPPM+M CGHVLCKQ+
Sbjct: 301 VVMANKKLDWQTMEQLPVDAQLSEEFQFHSVFVCPVSKEQSSDDNPPMMMSCGHVLCKQT 360

Query: 361 IMKMSKNSTK-SFKCPYCPTDIDATRCRQLYF 389
           I KMSKN +K SFKCPYCPTD+D +RCRQL+F
Sbjct: 361 INKMSKNGSKSSFKCPYCPTDVDISRCRQLHF 388

[Close]

BLAST of Cla97C01G017370 vs. TAIR 10
Match: AT2G22690.1 (zinc ion binding )

HSP 1 Score: 433.0 bits (1112), Expect = 2.6e-121
Identity = 222/390 (56.92%), Postives = 286/390 (73.33%), Query Frame = 0


Query: 1   MELDSIKDAFDRVTKKQKLSSSKSQEVVDQIHLELEQVLQKIQLADNPECPIDLNSVFAE 60
           MEL ++KDAFDRVTKKQKL  SK+ EVVD++  E+++ L+ IQ  DN E      SV A+
Sbjct: 1   MELKNVKDAFDRVTKKQKLCYSKTHEVVDKMSQEIDKALKTIQ-EDNHE------SVVAD 60

Query: 61  LKTKLKDIAPLTQLESTQKELNAALTKYPKLVEKSFNADISKAYRNVDFDRHTVNQIIAS 120
           LK   ++IAP+  LE++QKE+N  LTKYPK ++K+ N DIS AYRNV FD HTV+QI+A 
Sbjct: 61  LKKTFEEIAPINLLEASQKEINGVLTKYPKALDKTLNPDISTAYRNVKFDTHTVHQILAQ 120

Query: 121 HFYRQGMFELGDCFISEAGESESAVSLRSPFQEMYQILEAMKSRNLEPALNWALNNSSKL 180
            FYRQGM+++GDCFISE GE +   S+   F EM  ILEAMK R+L PAL W  +NS KL
Sbjct: 121 FFYRQGMYDVGDCFISETGEVKPESSVTKAFMEMNMILEAMKERDLGPALKWVASNSDKL 180

Query: 181 KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNH--MAELQKLMACLLWTG 240
           KE  SDL LKLHS+ F+EI +     +A+ YAR + A  +++     E+QKLM  LLW  
Sbjct: 181 KEAKSDLELKLHSLHFLEIAKDKTSEEAINYARKHFATYSADSCCFPEIQKLMCSLLWIR 240

Query: 241 RLDCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGIQGLPPLLKFMN 300
            L+ SPY  S+ LS   W   A+EL RQ+C  LG+S ESPL VTVAAG Q LP  LK++N
Sbjct: 241 NLNKSPY--SEFLSPVLWTNAAKELTRQYCILLGESPESPLSVTVAAGSQVLPTFLKYLN 300

Query: 301 VMAGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSI 360
           V+  K++EWQ+M+QL VPVEL  E++F+S+FVCPVSKE S+E+NPPM + CGHVLCKQSI
Sbjct: 301 VLPEKRKEWQTMEQLLVPVELSEEYRFYSVFVCPVSKEHSSEDNPPMRLACGHVLCKQSI 360

Query: 361 MKMSKNSTKSFKCPYCPTDIDATRCRQLYF 389
            +MS+N ++SFKCPYCPTDIDA++C+QLYF
Sbjct: 361 NRMSRNGSRSFKCPYCPTDIDASQCKQLYF 381

[Close]

BLAST of Cla97C01G017370 vs. TAIR 10
Match: AT2G22690.2 (zinc ion binding )

HSP 1 Score: 433.0 bits (1112), Expect = 2.6e-121
Identity = 222/390 (56.92%), Postives = 286/390 (73.33%), Query Frame = 0


Query: 1   MELDSIKDAFDRVTKKQKLSSSKSQEVVDQIHLELEQVLQKIQLADNPECPIDLNSVFAE 60
           MEL ++KDAFDRVTKKQKL  SK+ EVVD++  E+++ L+ IQ  DN E      SV A+
Sbjct: 1   MELKNVKDAFDRVTKKQKLCYSKTHEVVDKMSQEIDKALKTIQ-EDNHE------SVVAD 60

Query: 61  LKTKLKDIAPLTQLESTQKELNAALTKYPKLVEKSFNADISKAYRNVDFDRHTVNQIIAS 120
           LK   ++IAP+  LE++QKE+N  LTKYPK ++K+ N DIS AYRNV FD HTV+QI+A 
Sbjct: 61  LKKTFEEIAPINLLEASQKEINGVLTKYPKALDKTLNPDISTAYRNVKFDTHTVHQILAQ 120

Query: 121 HFYRQGMFELGDCFISEAGESESAVSLRSPFQEMYQILEAMKSRNLEPALNWALNNSSKL 180
            FYRQGM+++GDCFISE GE +   S+   F EM  ILEAMK R+L PAL W  +NS KL
Sbjct: 121 FFYRQGMYDVGDCFISETGEVKPESSVTKAFMEMNMILEAMKERDLGPALKWVASNSDKL 180

Query: 181 KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNH--MAELQKLMACLLWTG 240
           KE  SDL LKLHS+ F+EI +     +A+ YAR + A  +++     E+QKLM  LLW  
Sbjct: 181 KEAKSDLELKLHSLHFLEIAKDKTSEEAINYARKHFATYSADSCCFPEIQKLMCSLLWIR 240

Query: 241 RLDCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGIQGLPPLLKFMN 300
            L+ SPY  S+ LS   W   A+EL RQ+C  LG+S ESPL VTVAAG Q LP  LK++N
Sbjct: 241 NLNKSPY--SEFLSPVLWTNAAKELTRQYCILLGESPESPLSVTVAAGSQVLPTFLKYLN 300

Query: 301 VMAGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSI 360
           V+  K++EWQ+M+QL VPVEL  E++F+S+FVCPVSKE S+E+NPPM + CGHVLCKQSI
Sbjct: 301 VLPEKRKEWQTMEQLLVPVELSEEYRFYSVFVCPVSKEHSSEDNPPMRLACGHVLCKQSI 360

Query: 361 MKMSKNSTKSFKCPYCPTDIDATRCRQLYF 389
            +MS+N ++SFKCPYCPTDIDA++C+QLYF
Sbjct: 361 NRMSRNGSRSFKCPYCPTDIDASQCKQLYF 381

[Close]

BLAST of Cla97C01G017370 vs. TAIR 10
Match: AT5G09630.1 (LisH/CRA/RING-U-box domains-containing protein )

HSP 1 Score: 360.5 bits (924), Expect = 1.7e-99
Identity = 186/387 (48.06%), Postives = 272/387 (70.28%), Query Frame = 0


Query: 5   SIKDAFDRVTKKQKLSSSKSQEVVDQIHLELEQVLQKIQLADNPECPIDLNSVFAELKTK 64
           +++DAFDRV+KKQKL  S +Q+V+D +   ++  L +IQL ++    ++  SV  EL+ K
Sbjct: 8   TVRDAFDRVSKKQKLYHSVTQDVIDLVCDGIQDTLTRIQLGNDD--GVEPESVLTELRRK 67

Query: 65  LKDIAPLTQLESTQKELNAALTKYPKLVEKSFNADISKAYRNVDFDRHTVNQIIASHFYR 124
           L  + P+ QL+ + KE   +L+K  KL+E S++ DIS A  +VDFD + VN+I+  H YR
Sbjct: 68  LDALLPIIQLQKSHKETKWSLSKLVKLLEVSYHPDISLACFSVDFDINLVNKILIHHCYR 127

Query: 125 QGMFELGDCFISEAGESESAVSLRSPFQEMYQILEAMKSRNLEPALNWALNNSSKLKECG 184
           +G+F++GDC + EAG  E    +RS F E +QI++++K RN+EPA+ W   N  KLK+  
Sbjct: 128 EGLFDVGDCLVKEAGREEE-TEVRSQFLEFHQIVDSLKLRNIEPAMRWIFANRGKLKQKS 187

Query: 185 SDLLLKLHSMQFMEILQKGDRHDALKYARTYLA--PLASNHMAELQKLMACLLWTGRLDC 244
           S L  KL S+++ +IL++G   DAL+YART+    PL   H  E+QKL+ CLLW G  + 
Sbjct: 188 SKLEFKLLSLKYCDILREGKSDDALEYARTHFTQYPL---HFKEIQKLITCLLWIGNFEK 247

Query: 245 SPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGIQGLPPLLKFMNVMAG 304
           SPY  ++++S + WDKV +ELI ++ + L Q   SPL V ++AG + LP LLK +++MA 
Sbjct: 248 SPY--AEIVSPSCWDKVTKELIMEYHHLLDQPINSPLKVALSAGYESLPSLLKLVHLMAL 307

Query: 305 KKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMKMS 364
            KQEWQ+MKQLPVP+EL  E++FHS FVCPVS++QS+EENPPM + CGHV+ KQS+M++S
Sbjct: 308 TKQEWQAMKQLPVPLELGNEYKFHSAFVCPVSRDQSSEENPPMQLPCGHVISKQSMMRLS 367

Query: 365 KN-STKSFKCPYCPTDIDATRCRQLYF 389
           KN + ++FKCPYCP +  A+ CRQLYF
Sbjct: 368 KNCAFRTFKCPYCPAETLASACRQLYF 386

[Close]

BLAST of Cla97C01G017370 vs. TAIR 10
Match: AT3G55070.1 (LisH/CRA/RING-U-box domains-containing protein )

HSP 1 Score: 110.5 bits (275), Expect = 3.0e-24
Identity = 81/334 (24.25%), Postives = 156/334 (46.71%), Query Frame = 0


Query: 43  QLADNPECPIDLNSVFAELKTKLKDIAPLTQLESTQKELNAALTKYPKLVEKSFNADISK 102
           +LAD+     D  S    L T+L+ +    +LE      N    +    ++   + D+  
Sbjct: 79  ELADSDWSKDDTVSRLTCLVTRLQGLK--RKLEEGSNVENLQAQRCRARIDHLDSVDVEN 138

Query: 103 AYRNVDFDRHTVNQIIASHFYRQGMFELGDCFISEAGESESAVSLRSPFQEMYQILEAMK 162
                +++   + +I+  +  R   FE     +SE+      V +   F+E  ++++A+K
Sbjct: 139 I---TEWNNTKLKRILVDYMLRMSYFETA-TKLSESSNIMDLVDI-DIFREAKKVIDALK 198

Query: 163 SRNLEPALNWALNNSSKLKECGSDLLLKLHSMQFMEILQKGDRHD---ALKYARTYLAPL 222
           +R +  AL W  +N ++LK+  S    +L   +F+E+++         A++YAR +LA  
Sbjct: 199 NREVASALTWCADNKTRLKKSKSKFEFQLRLQEFIELVRVDTAESYKKAIQYARKHLASW 258

Query: 223 ASNHMAELQKLMACLLWTGRLDCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPL 282
            + HM ELQ ++A L +    +CS Y    L  +  WD + ++  ++FC   G + E  L
Sbjct: 259 GTTHMKELQHVLATLAFKSTTECSKY--KVLFELRQWDVLVDQFKQEFCKLYGMTMEPLL 318

Query: 283 GVTVAAGIQGL-PPLLKFMNVMAGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQS 342
            + + AG+  L  P               ++ ++L +P+   +  Q HS  VC +SKE  
Sbjct: 319 NIYLQAGLSALKTPYGLEEGCTKEDPLSQENFRKLALPLPFSK--QHHSKLVCYISKELM 378

Query: 343 TEENPPMLMLCGHVLCKQSIMKMSKNSTKSFKCP 373
             ENPP ++  G+V   +++ +M++ +     CP
Sbjct: 379 DTENPPQVLPNGYVYSTKALKEMAEKNGGKITCP 401

The following BLAST results are available for this feature:

BLAST of Cla97C01G017370 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008440495.1	6.3e-218	98.20	PREDICTED: protein RMD5 homolog A [Cucumis melo] >XP_008440496.1 PREDICTED: prot...	[more]
XP_004143429.1	1.2e-216	97.42	protein RMD5 homolog [Cucumis sativus] >XP_031743696.1 protein RMD5 homolog [Cuc...	[more]
XP_038883497.1	4.5e-216	97.68	protein RMD5 homolog [Benincasa hispida] >XP_038883498.1 protein RMD5 homolog [B...	[more]
XP_022132999.1	1.9e-214	95.88	protein RMD5 homolog A-like [Momordica charantia] >XP_022133000.1 protein RMD5 h...	[more]
XP_022963019.1	4.0e-212	95.36	protein RMD5 homolog [Cucurbita moschata] >XP_022963020.1 protein RMD5 homolog [...	[more]

BLAST of Cla97C01G017370 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9T075	2.2e-128	59.95	Protein RMD5 homolog OS=Arabidopsis thaliana OX=3702 GN=RMD5 PE=1 SV=1	[more]
Q640V2	1.1e-52	34.11	E3 ubiquitin-protein ligase RMND5A OS=Xenopus tropicalis OX=8364 GN=rmnd5a PE=2 ...	[more]
Q6GLP4	1.9e-52	32.55	E3 ubiquitin-protein ligase RMND5A OS=Xenopus laevis OX=8355 GN=rmnd5a PE=1 SV=1	[more]
O59668	2.5e-52	34.51	LisH domain-containing protein C29A3.03c OS=Schizosaccharomyces pombe (strain 97...	[more]
Q9H871	9.6e-52	33.62	E3 ubiquitin-protein transferase RMND5A OS=Homo sapiens OX=9606 GN=RMND5A PE=1 S...	[more]

BLAST of Cla97C01G017370 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B0U3	3.0e-218	98.20	protein RMD5 homolog A OS=Cucumis melo OX=3656 GN=LOC103484906 PE=4 SV=1	[more]
A0A5D3CLJ0	3.0e-218	98.20	Protein RMD5-like protein A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A6J1BU35	9.2e-215	95.88	protein RMD5 homolog A-like OS=Momordica charantia OX=3673 GN=LOC111005703 PE=4 ...	[more]
A0A6J1HGI0	1.9e-212	95.36	protein RMD5 homolog OS=Cucurbita moschata OX=3662 GN=LOC111463351 PE=4 SV=1	[more]
A0A6J1KU15	2.8e-211	94.85	protein RMD5 homolog OS=Cucurbita maxima OX=3661 GN=LOC111497206 PE=4 SV=1	[more]

BLAST of Cla97C01G017370 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37880.1	1.5e-129	59.95	LisH/CRA/RING-U-box domains-containing protein	[more]
AT2G22690.1	2.6e-121	56.92	zinc ion binding	[more]
AT2G22690.2	2.6e-121	56.92	zinc ion binding	[more]
AT5G09630.1	1.7e-99	48.06	LisH/CRA/RING-U-box domains-containing protein	[more]
AT3G55070.1	3.0e-24	24.25	LisH/CRA/RING-U-box domains-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013144	CRA domain	SMART	SM00757	toby_final6	coord: 203..299 e-value: 5.3E-19 score: 79.1
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 331..374 e-value: 8.0E-4 score: 28.7
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 331..374 score: 8.683004
IPR006595	CTLH, C-terminal LisH motif	SMART	SM00668	ctlh	coord: 150..207 e-value: 2.9E-8 score: 43.5
IPR006595	CTLH, C-terminal LisH motif	PROSITE	PS50897	CTLH	coord: 150..207 score: 11.247774
IPR006594	LIS1 homology motif	SMART	SM00667	Lish	coord: 110..142 e-value: 0.0025 score: 27.1
IPR006594	LIS1 homology motif	PROSITE	PS50896	LISH	coord: 110..142 score: 9.32115
IPR027370	RING-type zinc-finger, LisH dimerisation motif	PFAM	PF13445	zf-RING_UBOX	coord: 331..372 e-value: 2.0E-9 score: 37.3
IPR024964	CTLH/CRA C-terminal to LisH motif domain	PFAM	PF10607	CLTH	coord: 151..292 e-value: 2.3E-31 score: 108.7
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 321..387 e-value: 7.8E-9 score: 36.7
IPR045098	Fyv10 family	PANTHER	PTHR12170	MACROPHAGE ERYTHROBLAST ATTACHER-RELATED	coord: 1..388
None	No IPR available	PANTHER	PTHR12170:SF11	PROTEIN RMD5 HOMOLOG	coord: 1..388
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 325..383
IPR044063	Gid-type RING finger domain	PROSITE	PS51867	ZF_RING_GID	coord: 331..374 score: 13.15673
IPR037683	Rmd5, degenerated RING (dRING) finger	CDD	cd16652	dRing_Rmd5p_like	coord: 329..375 e-value: 8.10315E-29 score: 104.643

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C01G017370.1	Cla97C01G017370.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0034657	GID complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0061630	ubiquitin protein ligase activity
molecular_function	GO:0004842	ubiquitin-protein transferase activity