Cla97C01G015660 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C01G015660
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic
Location	Cla97Chr01: 29425695 .. 29430130 (+)
RNA-Seq Expression	Cla97C01G015660
Synteny	Cla97C01G015660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGAAGGAAGGAAGGAAGGGCGCCCGAGGATCGAGGGAGAGGGTGGCCCACGGTGGCCCACTCAGACTGCCCAACTGACCCGCGAGACTGCCCGACACCATTTCAGAGGAGGATCGAAAGCTCTCGTCGTTTTCCGCTGCCCGTAAGGGCCAATGACGGGCAGGGGGTACCCTCTGATTTAAAAGCTCCCGCTCCGGACGGCACGCGCGCTCAGGTGAGGTACTTCAACGCCTTCCTTTCCTTATAACTATTTACCCATTTACATTTTTTACTATCAATTTTCTTTTTCCTAAAAATAAAAAACAAAAAGCAACCTACTTTTACGCATAGATTTGAATAATTATTGTTGATTTCACTTTTTTTTTTTTTAAATATACTTTTCCTATGAAATTTATTTAAAATATATAAAATTAACTAGATTTTATATATATATGTATATACTTGTTCAATAGTCTCGATCTGTTGCATTAATTGAGCCTAATTTTGGTTCAAATCAGTGAGTTGGGAGATATACGAGTTTCTGTTTTGTTAAAATTATTGTTTGATAGATTTAGCCCACATTAAAATGAATGATAAAAATTGCAATATTATTTTAGTCAATGTGTATTGAAATTTGTTCATTTTTAAATATTCAATTTCAGTTTTTTACCTTAAATAGATTTTAAGTTTAGACCATCGTACTTATTTATTGTTATCTTTTATTTAAAAACAAAGTTTGTTATTGGTCAACAATTTTATTATGAATTTTTAAAAAACCTTTTGAATTTAAGAGGATCAACGTATCTCTTAACTTGGTTGACACATTTTCATAATAAATTTTGAAAACATATTCATGTATTATATTTATTTGCATAAAAATTATTATAATTATTTAGTCAATTTCAATAAATTAACTTTGAGAGACTCAATTTAAGATTTATTAAAAGTACATGAAACTAAAATTTGATATTTAAAAGTATAAATATTAAAGTTGAATAAACTTCAAATTATTGGGACCAAAATAGTATTTTTATTTTTTTTTTTAATTTTAATTCTAAAAATTGTCGTAGTTTTTTTTTTCTTTTTTTAAAAAAAACCTAGATGGCAATGGGTGAAATTGAGAGTTATTTGTAAAAAATTGAAAATTGTGTAATTGGTAAAACTTGAATTAGATTTAAAGCATACAAAACTAAGGATTAGATTTAAAGAATACAAAATTATATATTTTCAACTGAGTACAAATAAACAAAATATCGTTAAGAAAAGTTATCAATCGTGACAACAACGGATGAAATTGGCAATAAGATTATTTAGGTTAAAATATTTGTACTTGATTTGATACGTGGGATATATGTCTTAAAAATTAATAATATGCAACAAGATTATTTTTAAAAGTGAAATATGTCCCCTTTTATACTACCATGAAGGAAATATATTCAAATTAAGTGTATAATGAGTGTCTACTTAAATCATATTTAGGTTGACAATTATTGAAAAACAAAATTCAAAAAGAGAAAGAGAAAGAGAAGTAGAAATGATTTTTTTTTTCTTTTTTTAAAAAAAAGATTAATGGAAAGGAAAGTAAAGAGTGTAAGGAAGTAAAGTCAATATGCATGAGATGAAGACGAAAAGAGTAGAAATTAATAACTGAATAAGGATAATTACAGAAGGGTCAAAAATAGCAATAATTAAGCAAAATTAATATAATTGTCGTGTTACTTAAGGGATAAGATTTGAACTTTGGTATCATTATCCATCAACAATCTGGAACGAAGAAATTGACCATAACACCCACAAATCTCAGAAGACATGTAGGCCCCTTCATCTTTTTTATTTATATATTTATTTATTTTTAATTAATTTTTCTTTTAAAAAATCAATTCAAAAGTTTGGTGTCTTCATAAACCACAATTAAGTAAATGGGAAACAAATTAAAAGAAAATGGTAAGATAAGACTAAAAAGACTGATGATGTGTCGCATTCTATGTGTGTCTCAAGTATGAGTGGTCAGTGTCACAACACAACAACCACCATCATGAATTTTTTTAAATTTTCTAATGTTGCAATTTCTAATTTTTTTTTTTTTTTTGGGTTATATCATGAGTGAAAATTGGACCATTTCTAGCATTTCAAATAACTACCTCATATTAAAACATTAAAGTACGAATTTTCACTCTAGTTGAAAATAATCATTAAAAAAAACATATCAAATATGATTTGAAATACATATATATTTTGATAATTATAATTATTGTTTGAGTGCAACTTAATATATATCTTTTACTATAGTATAACTGAATAGATGTGACATTCTCAATGCATATGGATTATTGTATGTTAAAAGATTTTTTTTTTATTAAGTTCACCGAATTTAATCAATTCTATAGTTTAAAAGGATGTTTTCAAAAATAGAAAAATTGTTAAAAATAATTATAAATGTGGTAAAATTTTAATTTCTATCTATGATAGACTGCGATAAACCCAGATAGACATCTATCAATTTACTAGATAAATAATGTCTATATGGGTCTATCGCGTTTTATCAAAGATAAAAAGTAAAACTTTGCTATATTTGTAAACAGTTTGGTATTTTTTTTATTTAAAATAATTTTCCTAATTTAAAGGGAAAAAGAAAAGTTCTTCTTAAAAACAATTTTGAAAATAAAATTTCGAACCCCAAGTCATAATTTTTTTTTTAATCTAAATCATAATGTGTGGTTTTGATAGTGTGTAAATGTTTTATACTTACGTGTTACCATGAGAATATTTAAAATTAAATTATAAGATTAGCCTATACACTTTTCAATTTCTATATAATAAATCTTAAAAATTTAAAAGGTGTAATATTTGTCTCGACTTTTATTTTGGTGTATGAAAAAAATTTTAACATTGCAAAAAATGCCTAACAAATTTTTAAATCTTTCGATTTTAAATTTAATATAAATCCTTCAACTTTAAGTTTTTTTTAATAGTTAATTGATCTATTTGAAAACTCTAAACTCACAAACCTATATTGAATATTGAAGCGACTATTTGCATTCAATGAGACAAAATTAATTTATGTGTAGTAAATTTATTGATTTAAGAAAATGTTAGTTTAGAACTTGTTAGAAAAAAAAAAAAAAAAACGGAGGAAAGCAAGAAAGAAAAAAAATTACAAATATATTAAACACTTTATCCTTTAAGACTTAATTAGACACAAAATCACAAATTTAAGAAATTAATAGATATATGTTTTTCTTTTAATTTAAGCGATCTCAAATTTTACACCGACTTAAAACTTTAAACAAAATTCAATCGGTAGGGTGAATATGTGAGAAGAAGATGAAATATGAGTTGATTTCGTTCATTTGATTAATGTAAATTCGTCAAAGCGATCTTAGCTCGTCGGTGATCGATATGACCTTTTATCTTAGAAGTGGAAGGTTCAAATTCCCCCACTCCATTTGTATCAAGTTCATTTTATTGCCATGAATAACAGATAATTTCGAACAAAACATGAAATTATTTATTCTAGTACAATTATCTCTTTCATATTTATTCTTGAAGCTCTTATATGTTTGCTTAACAAATATACAAAGATTATTAAGGATAACTATAGAGCTTACGTGGGAAAAGGGTTGCATATTAATTTTGGTCGAAACTTTGTCTTATGTTGGAATATTATTAGGTAAAACAGGGTCTGAAATGCACAAGAAAAGTTAAAAAAATAAATAAATAAATAAAAATAAATAAATAAATAAAAGATAGAAAAGTTGATAATCAATCAATGTTTCTCATGTGTCGATGTCTAGAGTCATGTGTTTGAATTGTTGTTTTCATGTAATTTCTTTAATGTTTCTCAGTCACTATGTGAACTAAAAATCAGCCACTTAAACAGTTGGTCTTTCTTTCTTTCTTTTCTTCTTTTTTAATTTTATTTTTATTTTTTATTTTTTCTAAAATAAAAATAATAAATTAGTCAATTTTAGTCTATCTATTGACCAGAATATCCAATCTTTTGCACATATTGCATTTGCAAAACCATTTTGTTGATTTTCTTTAATTAGGCAGTTTACTACAATTTTTTTTTTTTAATCCGTGCATTTTCTTTCAGGGATTTTATGTCTTTATTAGATAATAGGGAGTTTTGAATTTCGAGATTTATTGAAAATATTCAATAACTTGATTGATAATAATGAGGTGAATTTTTTATTTGTTACTTTGTGCGCCGTCCTATTATTTGCAGGTGCGGTTGCTAAATCTGCTCAATTTCCTCTTCATGTATGGTTACCTGATGCTATGGAGGGTCCTACCCCCATTTCGGCTCTTATACATGCTGCTACGATGGTAGCAGCGGGAATTTTTCTTGTCGCTCGGCTTCTTCCGCTTTTTGTAGTAATACCTTATATCATGAATCTAATAGCTTTGATAGGTATAATAACAGTACTATTTGGAGCTACTTTAGTGTAG

mRNA sequence

ATGGAAGGAAGGAAGGAAGGAAGGGCGCCCGAGGATCGAGGGAGAGGGTGGCCCACGGTGGCCCACTCAGACTGCCCAACTGACCCGCGAGACTGCCCGACACCATTTCAGAGGAGGATCGAAAGCTCTCGTCGTTTTCCGCTGCCCGTAAGGGCCAATGACGGGCAGGGGGTACCCTCTGATTTAAAAGCTCCCGCTCCGGACGGCACGCGCGCTCAGATAATAGGGAGTTTTGAATTTCGAGATTTATTGAAAATATTCAATAACTTGATTGATAATAATGAGGTGAATTTTTTATTTGTTACTTTGTGCGCCGTCCTATTATTTGCAGGTGCGGTTGCTAAATCTGCTCAATTTCCTCTTCATGTATGGTTACCTGATGCTATGGAGGGTCCTACCCCCATTTCGGCTCTTATACATGCTGCTACGATGGTAGCAGCGGGAATTTTTCTTGTCGCTCGGCTTCTTCCGCTTTTTGTAGTAATACCTTATATCATGAATCTAATAGCTTTGATAGGTATAATAACAGTACTATTTGGAGCTACTTTAGTGTAG

Coding sequence (CDS)

ATGGAAGGAAGGAAGGAAGGAAGGGCGCCCGAGGATCGAGGGAGAGGGTGGCCCACGGTGGCCCACTCAGACTGCCCAACTGACCCGCGAGACTGCCCGACACCATTTCAGAGGAGGATCGAAAGCTCTCGTCGTTTTCCGCTGCCCGTAAGGGCCAATGACGGGCAGGGGGTACCCTCTGATTTAAAAGCTCCCGCTCCGGACGGCACGCGCGCTCAGATAATAGGGAGTTTTGAATTTCGAGATTTATTGAAAATATTCAATAACTTGATTGATAATAATGAGGTGAATTTTTTATTTGTTACTTTGTGCGCCGTCCTATTATTTGCAGGTGCGGTTGCTAAATCTGCTCAATTTCCTCTTCATGTATGGTTACCTGATGCTATGGAGGGTCCTACCCCCATTTCGGCTCTTATACATGCTGCTACGATGGTAGCAGCGGGAATTTTTCTTGTCGCTCGGCTTCTTCCGCTTTTTGTAGTAATACCTTATATCATGAATCTAATAGCTTTGATAGGTATAATAACAGTACTATTTGGAGCTACTTTAGTGTAG

Protein sequence

MEGRKEGRAPEDRGRGWPTVAHSDCPTDPRDCPTPFQRRIESSRRFPLPVRANDGQGVPSDLKAPAPDGTRAQIIGSFEFRDLLKIFNNLIDNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFVVIPYIMNLIALIGIITVLFGATLV

Homology

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BLAST of Cla97C01G015660 vs. NCBI nr
Match: QZL38730.1 (NADH dehydrogenase subunit F [Citrullus ecirrhosus])

HSP 1 Score: 198.4 bits (503), Expect = 5.5e-47
Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 0


Query: 76  GSFEFRDLLKIFNNLIDNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPI 135
           GSFEFRDL KIFNNLIDNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPI
Sbjct: 201 GSFEFRDLFKIFNNLIDNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPI 260

Query: 136 SALIHAATMVAAGIFLVARLLPLFVVIPYIMNLIALIGIITVLFGATL 184
           SALIHAATMVAAGIFLVARLLPLFVVIPYIMNLIALIGIITVLFGATL
Sbjct: 261 SALIHAATMVAAGIFLVARLLPLFVVIPYIMNLIALIGIITVLFGATL 308

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BLAST of Cla97C01G015660 vs. NCBI nr
Match: QZL38642.1 (NADH dehydrogenase subunit F [Citrullus naudinianus])

HSP 1 Score: 198.0 bits (502), Expect = 7.2e-47
Identity = 106/108 (98.15%), Postives = 107/108 (99.07%), Query Frame = 0


Query: 76  GSFEFRDLLKIFNNLIDNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPI 135
           GSFEFRDL KIFNNLIDNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPI
Sbjct: 201 GSFEFRDLFKIFNNLIDNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPI 260

Query: 136 SALIHAATMVAAGIFLVARLLPLFVVIPYIMNLIALIGIITVLFGATL 184
           SALIHAATMVAAGIFLVARLLPLF+VIPYIMNLIALIGIITVLFGATL
Sbjct: 261 SALIHAATMVAAGIFLVARLLPLFIVIPYIMNLIALIGIITVLFGATL 308

[Close]

BLAST of Cla97C01G015660 vs. NCBI nr
Match: YP_009326037.1 (NADH dehydrogenase subunit 5 [Citrullus lanatus] >YP_009348079.1 NADH dehydrogenase subunit 5 [Citrullus mucosospermus] >YP_009431604.1 NADH dehydrogenase subunit 5 [Citrullus amarus] >APW82510.1 NADH dehydrogenase subunit 5 [Citrullus lanatus subsp. vulgaris] >APD52529.1 NADH dehydrogenase subunit 5 [Citrullus lanatus] >APW82595.1 NADH dehydrogenase subunit 5 [Citrullus lanatus subsp. vulgaris] >APW82765.1 NADH dehydrogenase subunit 5 [Citrullus mucosospermus] >APW82850.1 NADH dehydrogenase subunit 5 [Citrullus mucosospermus])

HSP 1 Score: 196.8 bits (499), Expect = 1.6e-46
Identity = 106/108 (98.15%), Postives = 107/108 (99.07%), Query Frame = 0


Query: 76  GSFEFRDLLKIFNNLIDNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPI 135
           GSFEFRDL +IFNNLIDNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPI
Sbjct: 201 GSFEFRDLFQIFNNLIDNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPI 260

Query: 136 SALIHAATMVAAGIFLVARLLPLFVVIPYIMNLIALIGIITVLFGATL 184
           SALIHAATMVAAGIFLVARLLPLFVVIPYIMNLIALIGIITVLFGATL
Sbjct: 261 SALIHAATMVAAGIFLVARLLPLFVVIPYIMNLIALIGIITVLFGATL 308

[Close]

BLAST of Cla97C01G015660 vs. NCBI nr
Match: APW82680.1 (NADH dehydrogenase subunit 5 [Citrullus lanatus subsp. vulgaris])

HSP 1 Score: 196.8 bits (499), Expect = 1.6e-46
Identity = 106/108 (98.15%), Postives = 107/108 (99.07%), Query Frame = 0


Query: 76  GSFEFRDLLKIFNNLIDNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPI 135
           GSFEFRDL +IFNNLIDNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPI
Sbjct: 201 GSFEFRDLFQIFNNLIDNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPI 260

Query: 136 SALIHAATMVAAGIFLVARLLPLFVVIPYIMNLIALIGIITVLFGATL 184
           SALIHAATMVAAGIFLVARLLPLFVVIPYIMNLIALIGIITVLFGATL
Sbjct: 261 SALIHAATMVAAGIFLVARLLPLFVVIPYIMNLIALIGIITVLFGATL 308

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BLAST of Cla97C01G015660 vs. NCBI nr
Match: YP_010131151.1 (NADH-plastoquinone oxidoreductase subunit 5 [Benincasa hispida] >QPZ75799.1 NADH-plastoquinone oxidoreductase subunit 5 [Benincasa hispida] >QSQ72358.1 NADH dehydrogenase subunit F [Benincasa hispida])

HSP 1 Score: 196.1 bits (497), Expect = 2.7e-46
Identity = 104/108 (96.30%), Postives = 107/108 (99.07%), Query Frame = 0


Query: 76  GSFEFRDLLKIFNNLIDNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPI 135
           GSFEFRDL +IFNNLIDNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPI
Sbjct: 201 GSFEFRDLFQIFNNLIDNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPI 260

Query: 136 SALIHAATMVAAGIFLVARLLPLFVVIPYIMNLIALIGIITVLFGATL 184
           SALIHAATMVAAGIFLVARLLPLF++IPYIMNLIALIGIITVLFGATL
Sbjct: 261 SALIHAATMVAAGIFLVARLLPLFIIIPYIMNLIALIGIITVLFGATL 308

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BLAST of Cla97C01G015660 vs. ExPASy Swiss-Prot
Match: Q2QD43 (NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhF PE=3 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.8e-48
Identity = 103/108 (95.37%), Postives = 106/108 (98.15%), Query Frame = 0


Query: 76  GSFEFRDLLKIFNNLIDNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPI 135
           GSFEFRDL +IFNNLIDNNEVNFLF+TLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPI
Sbjct: 201 GSFEFRDLFQIFNNLIDNNEVNFLFLTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPI 260

Query: 136 SALIHAATMVAAGIFLVARLLPLFVVIPYIMNLIALIGIITVLFGATL 184
           SALIHAATMVAAGIFLVARLLPLF+ IPYIMNLIALIGIITVLFGATL
Sbjct: 261 SALIHAATMVAAGIFLVARLLPLFIAIPYIMNLIALIGIITVLFGATL 308

[Close]

BLAST of Cla97C01G015660 vs. ExPASy Swiss-Prot
Match: Q31849 (NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Ambrosia trifida OX=4214 GN=ndhF PE=3 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 3.4e-47
Identity = 100/110 (90.91%), Postives = 106/110 (96.36%), Query Frame = 0


Query: 74  IIGSFEFRDLLKIFNNLIDNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPT 133
           I GSFEFRDL +IFNNLI NNEVNFLFVTLCAVLLFAGA+AKSAQFPLHVWLPDAMEGPT
Sbjct: 199 ITGSFEFRDLFQIFNNLISNNEVNFLFVTLCAVLLFAGAIAKSAQFPLHVWLPDAMEGPT 258

Query: 134 PISALIHAATMVAAGIFLVARLLPLFVVIPYIMNLIALIGIITVLFGATL 184
           PISALIHAATMVAAGIFLVARL+PLF+VIP+IMNLI+LIGIITV FGATL
Sbjct: 259 PISALIHAATMVAAGIFLVARLMPLFIVIPHIMNLISLIGIITVFFGATL 308

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BLAST of Cla97C01G015660 vs. ExPASy Swiss-Prot
Match: Q68RV9 (NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Panax ginseng OX=4054 GN=ndhF PE=3 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.7e-46
Identity = 100/110 (90.91%), Postives = 106/110 (96.36%), Query Frame = 0


Query: 74  IIGSFEFRDLLKIFNNLIDNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPT 133
           I GSFEFRDL KIF+NLI NNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPT
Sbjct: 199 ITGSFEFRDLFKIFSNLIYNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPT 258

Query: 134 PISALIHAATMVAAGIFLVARLLPLFVVIPYIMNLIALIGIITVLFGATL 184
           PISALIHAATMVAAGIFLVARL+PLF+VIP+IMNLI+L+GIITVL GATL
Sbjct: 259 PISALIHAATMVAAGIFLVARLIPLFIVIPHIMNLISLVGIITVLLGATL 308

[Close]

BLAST of Cla97C01G015660 vs. ExPASy Swiss-Prot
Match: B1NWJ6 (NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Manihot esculenta OX=3983 GN=ndhF PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 3.7e-46
Identity = 99/110 (90.00%), Postives = 104/110 (94.55%), Query Frame = 0


Query: 74  IIGSFEFRDLLKIFNNLIDNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPT 133
           I GSFEFRDL KIFNNLI NN+VNFLFVTLCAVLLF+GA+AKSAQFPLHVWLPDAMEGPT
Sbjct: 199 ITGSFEFRDLFKIFNNLIYNNQVNFLFVTLCAVLLFSGAIAKSAQFPLHVWLPDAMEGPT 258

Query: 134 PISALIHAATMVAAGIFLVARLLPLFVVIPYIMNLIALIGIITVLFGATL 184
           PISALIHAATMVAAGIFLVARL PLFV+IP+IMNLIALIGIITV  GATL
Sbjct: 259 PISALIHAATMVAAGIFLVARLFPLFVIIPFIMNLIALIGIITVFLGATL 308

[Close]

BLAST of Cla97C01G015660 vs. ExPASy Swiss-Prot
Match: P51098 (NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Athroisma gracile OX=41482 GN=ndhF PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 4.9e-46
Identity = 98/110 (89.09%), Postives = 104/110 (94.55%), Query Frame = 0


Query: 74  IIGSFEFRDLLKIFNNLIDNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPT 133
           I GSFEFRDL +IFNNLI NNEVNFLFVTLCAVLLFAGA+AKSAQFPLHVWLPDAMEGPT
Sbjct: 199 ITGSFEFRDLFQIFNNLISNNEVNFLFVTLCAVLLFAGAIAKSAQFPLHVWLPDAMEGPT 258

Query: 134 PISALIHAATMVAAGIFLVARLLPLFVVIPYIMNLIALIGIITVLFGATL 184
           PISALIHAATMVAAGIFLVARL+PLF+VIP+IMN I+LIGIITV  GATL
Sbjct: 259 PISALIHAATMVAAGIFLVARLMPLFIVIPHIMNFISLIGIITVFLGATL 308

[Close]

BLAST of Cla97C01G015660 vs. ExPASy TrEMBL
Match: A0A1P8LEA9 (NAD(P)H dehydrogenase subunit 5 OS=Citrullus mucosospermus OX=519315 GN=ndhF PE=3 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 7.8e-47
Identity = 106/108 (98.15%), Postives = 107/108 (99.07%), Query Frame = 0


Query: 76  GSFEFRDLLKIFNNLIDNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPI 135
           GSFEFRDL +IFNNLIDNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPI
Sbjct: 201 GSFEFRDLFQIFNNLIDNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPI 260

Query: 136 SALIHAATMVAAGIFLVARLLPLFVVIPYIMNLIALIGIITVLFGATL 184
           SALIHAATMVAAGIFLVARLLPLFVVIPYIMNLIALIGIITVLFGATL
Sbjct: 261 SALIHAATMVAAGIFLVARLLPLFVVIPYIMNLIALIGIITVLFGATL 308

[Close]

BLAST of Cla97C01G015660 vs. ExPASy TrEMBL
Match: A0A1P8LET2 (NAD(P)H dehydrogenase subunit 5 OS=Citrullus lanatus subsp. vulgaris OX=260674 GN=ndhF PE=3 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 7.8e-47
Identity = 106/108 (98.15%), Postives = 107/108 (99.07%), Query Frame = 0


Query: 76  GSFEFRDLLKIFNNLIDNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPI 135
           GSFEFRDL +IFNNLIDNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPI
Sbjct: 201 GSFEFRDLFQIFNNLIDNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPI 260

Query: 136 SALIHAATMVAAGIFLVARLLPLFVVIPYIMNLIALIGIITVLFGATL 184
           SALIHAATMVAAGIFLVARLLPLFVVIPYIMNLIALIGIITVLFGATL
Sbjct: 261 SALIHAATMVAAGIFLVARLLPLFVVIPYIMNLIALIGIITVLFGATL 308

[Close]

BLAST of Cla97C01G015660 vs. ExPASy TrEMBL
Match: A0A343A8F9 (NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Citrullus lanatus OX=3654 GN=ndhF PE=3 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 7.8e-47
Identity = 106/108 (98.15%), Postives = 107/108 (99.07%), Query Frame = 0


Query: 76  GSFEFRDLLKIFNNLIDNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPI 135
           GSFEFRDL +IFNNLIDNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPI
Sbjct: 201 GSFEFRDLFQIFNNLIDNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPI 260

Query: 136 SALIHAATMVAAGIFLVARLLPLFVVIPYIMNLIALIGIITVLFGATL 184
           SALIHAATMVAAGIFLVARLLPLFVVIPYIMNLIALIGIITVLFGATL
Sbjct: 261 SALIHAATMVAAGIFLVARLLPLFVVIPYIMNLIALIGIITVLFGATL 308

[Close]

BLAST of Cla97C01G015660 vs. ExPASy TrEMBL
Match: A0A249RX42 (NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Citrullus amarus OX=1567104 GN=ndhF PE=3 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 7.8e-47
Identity = 106/108 (98.15%), Postives = 107/108 (99.07%), Query Frame = 0


Query: 76  GSFEFRDLLKIFNNLIDNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPI 135
           GSFEFRDL +IFNNLIDNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPI
Sbjct: 201 GSFEFRDLFQIFNNLIDNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPI 260

Query: 136 SALIHAATMVAAGIFLVARLLPLFVVIPYIMNLIALIGIITVLFGATL 184
           SALIHAATMVAAGIFLVARLLPLFVVIPYIMNLIALIGIITVLFGATL
Sbjct: 261 SALIHAATMVAAGIFLVARLLPLFVVIPYIMNLIALIGIITVLFGATL 308

[Close]

BLAST of Cla97C01G015660 vs. ExPASy TrEMBL
Match: A0A1P8LDU6 (NAD(P)H dehydrogenase subunit 5 OS=Citrullus lanatus subsp. vulgaris OX=260674 GN=ndhF PE=3 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 7.8e-47
Identity = 106/108 (98.15%), Postives = 107/108 (99.07%), Query Frame = 0


Query: 76  GSFEFRDLLKIFNNLIDNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPI 135
           GSFEFRDL +IFNNLIDNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPI
Sbjct: 201 GSFEFRDLFQIFNNLIDNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPI 260

Query: 136 SALIHAATMVAAGIFLVARLLPLFVVIPYIMNLIALIGIITVLFGATL 184
           SALIHAATMVAAGIFLVARLLPLFVVIPYIMNLIALIGIITVLFGATL
Sbjct: 261 SALIHAATMVAAGIFLVARLLPLFVVIPYIMNLIALIGIITVLFGATL 308

[Close]

BLAST of Cla97C01G015660 vs. TAIR 10
Match: ATCG01010.1 (NADH-Ubiquinone oxidoreductase (complex I), chain 5 protein )

HSP 1 Score: 170.2 bits (430), Expect = 1.5e-42
Identity = 92/110 (83.64%), Postives = 99/110 (90.00%), Query Frame = 0


Query: 74  IIGSFEFRDLLKIFNNLIDNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPT 133
           I GSFEF+DL +IFNNLI NN VN LF+TLCA LLF G +AKSAQFPLHVWLPDAMEGPT
Sbjct: 199 ITGSFEFQDLFEIFNNLILNNRVNLLFLTLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPT 258

Query: 134 PISALIHAATMVAAGIFLVARLLPLFVVIPYIMNLIALIGIITVLFGATL 184
           PISALIHAATMVAAGIFLVARLLPLF+VIP IM +I+LIGIITVL GATL
Sbjct: 259 PISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGIITVLLGATL 308

[Close]

BLAST of Cla97C01G015660 vs. TAIR 10
Match: ATMG00060.1 (NADH dehydrogenase subunit 5C )

HSP 1 Score: 77.4 bits (189), Expect = 1.3e-14
Identity = 44/82 (53.66%), Postives = 53/82 (64.63%), Query Frame = 0


Query: 101 VTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFV 160
           ++L  +LL  GAV KSAQ   H W PDAMEGPTP+SA IHAATMV AG+F++AR  PLF 
Sbjct: 218 ISLICILLLIGAVGKSAQIGSHTWSPDAMEGPTPVSASIHAATMVTAGVFMIARCSPLFE 277

Query: 161 VIPYIMNLIALIGIITVLFGAT 183
             P  + +I   G  T    AT
Sbjct: 278 YPPTALIVITSAGATTSFLAAT 299

[Close]

BLAST of Cla97C01G015660 vs. TAIR 10
Match: ATMG00513.1 (NADH dehydrogenase 5A )

HSP 1 Score: 77.4 bits (189), Expect = 1.3e-14
Identity = 44/82 (53.66%), Postives = 53/82 (64.63%), Query Frame = 0


Query: 101 VTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFV 160
           ++L  +LL  GAV KSAQ   H W PDAMEGPTP+SA IHAATMV AG+F++AR  PLF 
Sbjct: 218 ISLICILLLIGAVGKSAQIGSHTWSPDAMEGPTPVSASIHAATMVTAGVFMIARCSPLFE 277

Query: 161 VIPYIMNLIALIGIITVLFGAT 183
             P  + +I   G  T    AT
Sbjct: 278 YPPTALIVITSAGATTSFLAAT 299

[Close]

BLAST of Cla97C01G015660 vs. TAIR 10
Match: ATMG00665.1 (NADH dehydrogenase 5B )

HSP 1 Score: 77.4 bits (189), Expect = 1.3e-14
Identity = 44/82 (53.66%), Postives = 53/82 (64.63%), Query Frame = 0


Query: 101 VTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFV 160
           ++L  +LL  GAV KSAQ   H W PDAMEGPTP+SA IHAATMV AG+F++AR  PLF 
Sbjct: 218 ISLICILLLIGAVGKSAQIGSHTWSPDAMEGPTPVSASIHAATMVTAGVFMIARCSPLFE 277

Query: 161 VIPYIMNLIALIGIITVLFGAT 183
             P  + +I   G  T    AT
Sbjct: 278 YPPTALIVITSAGATTSFLAAT 299

The following BLAST results are available for this feature:

BLAST of Cla97C01G015660 vs. NCBI nr


Match Name	E-value	Identity	Description
QZL38730.1	5.5e-47	99.07	NADH dehydrogenase subunit F [Citrullus ecirrhosus]	[more]
QZL38642.1	7.2e-47	98.15	NADH dehydrogenase subunit F [Citrullus naudinianus]	[more]
YP_009326037.1	1.6e-46	98.15	NADH dehydrogenase subunit 5 [Citrullus lanatus] >YP_009348079.1 NADH dehydrogen...	[more]
APW82680.1	1.6e-46	98.15	NADH dehydrogenase subunit 5 [Citrullus lanatus subsp. vulgaris]	[more]
YP_010131151.1	2.7e-46	96.30	NADH-plastoquinone oxidoreductase subunit 5 [Benincasa hispida] >QPZ75799.1 NADH...	[more]

BLAST of Cla97C01G015660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2QD43	1.8e-48	95.37	NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Cucumis sativus OX=36...	[more]
Q31849	3.4e-47	90.91	NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Ambrosia trifida OX=4...	[more]
Q68RV9	1.7e-46	90.91	NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Panax ginseng OX=4054...	[more]
B1NWJ6	3.7e-46	90.00	NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Manihot esculenta OX=...	[more]
P51098	4.9e-46	89.09	NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Athroisma gracile OX=...	[more]

BLAST of Cla97C01G015660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1P8LEA9	7.8e-47	98.15	NAD(P)H dehydrogenase subunit 5 OS=Citrullus mucosospermus OX=519315 GN=ndhF PE=...	[more]
A0A1P8LET2	7.8e-47	98.15	NAD(P)H dehydrogenase subunit 5 OS=Citrullus lanatus subsp. vulgaris OX=260674 G...	[more]
A0A343A8F9	7.8e-47	98.15	NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Citrullus lanatus OX=...	[more]
A0A249RX42	7.8e-47	98.15	NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Citrullus amarus OX=1...	[more]
A0A1P8LDU6	7.8e-47	98.15	NAD(P)H dehydrogenase subunit 5 OS=Citrullus lanatus subsp. vulgaris OX=260674 G...	[more]

BLAST of Cla97C01G015660 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG01010.1	1.5e-42	83.64	NADH-Ubiquinone oxidoreductase (complex I), chain 5 protein	[more]
ATMG00060.1	1.3e-14	53.66	NADH dehydrogenase subunit 5C	[more]
ATMG00513.1	1.3e-14	53.66	NADH dehydrogenase 5A	[more]
ATMG00665.1	1.3e-14	53.66	NADH dehydrogenase 5B	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01434	NADHDHGNASE5	coord: 111..132 score: 82.57 coord: 133..159 score: 78.28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..36
None	No IPR available	PANTHER	PTHR42829:SF2	NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 5	coord: 75..183
None	No IPR available	PANTHER	PTHR42829	NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 5	coord: 75..183
IPR001750	NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit	PFAM	PF00361	Proton_antipo_M	coord: 74..183 e-value: 8.1E-28 score: 97.5

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C01G015660.1	Cla97C01G015660.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042773	ATP synthesis coupled electron transport
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity
molecular_function	GO:0048038	quinone binding