Cla97C01G006370 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C01G006370
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	extensin-like
Location	Cla97Chr01: 6353463 .. 6353900 (-)
RNA-Seq Expression	Cla97C01G006370
Synteny	Cla97C01G006370

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTCCTCTCAATTTTCTCCTTTTTCTCAATTTCCTCCTCCTCATTTCCCCTTCCTCCACCTCCGCCGCCGCCCCCGCCCGCCTCCTCGACGACACCACCATCCCGACCACCCCCGCCGACCCCACCGTCAAGTGCGCCCCATGTGAACAGAACCAGCCATCTCCTCCGCCGCCGGTAGTCTACCCATCGCCCCCGCCGCCGTCTCCTCCGCCGCCCGATGTCGTTCCCTACTACTCTCCCCCACCCCCGAAGAAGAAGGAGCCCAAGAGCCCCAACTGCCCTCCGCCGCCGTCTCCCTCGTTCATGTACATAACCGGCCCTCCCGGCGACCTTTATCCGATCGACCGGAATTATAACGCCGCCGGCCGGAGATCCACCGCCGCCGCGGCCTCCGCCGTGATTGGGCTTGTTCTAGCCGGACTTCTGTTGGTTTAA

mRNA sequence

ATGCTTCCTCTCAATTTTCTCCTTTTTCTCAATTTCCTCCTCCTCATTTCCCCTTCCTCCACCTCCGCCGCCGCCCCCGCCCGCCTCCTCGACGACACCACCATCCCGACCACCCCCGCCGACCCCACCGTCAAGTGCGCCCCATGTGAACAGAACCAGCCATCTCCTCCGCCGCCGGTAGTCTACCCATCGCCCCCGCCGCCGTCTCCTCCGCCGCCCGATGTCGTTCCCTACTACTCTCCCCCACCCCCGAAGAAGAAGGAGCCCAAGAGCCCCAACTGCCCTCCGCCGCCGTCTCCCTCGTTCATGTACATAACCGGCCCTCCCGGCGACCTTTATCCGATCGACCGGAATTATAACGCCGCCGGCCGGAGATCCACCGCCGCCGCGGCCTCCGCCGTGATTGGGCTTGTTCTAGCCGGACTTCTGTTGGTTTAA

Coding sequence (CDS)

ATGCTTCCTCTCAATTTTCTCCTTTTTCTCAATTTCCTCCTCCTCATTTCCCCTTCCTCCACCTCCGCCGCCGCCCCCGCCCGCCTCCTCGACGACACCACCATCCCGACCACCCCCGCCGACCCCACCGTCAAGTGCGCCCCATGTGAACAGAACCAGCCATCTCCTCCGCCGCCGGTAGTCTACCCATCGCCCCCGCCGCCGTCTCCTCCGCCGCCCGATGTCGTTCCCTACTACTCTCCCCCACCCCCGAAGAAGAAGGAGCCCAAGAGCCCCAACTGCCCTCCGCCGCCGTCTCCCTCGTTCATGTACATAACCGGCCCTCCCGGCGACCTTTATCCGATCGACCGGAATTATAACGCCGCCGGCCGGAGATCCACCGCCGCCGCGGCCTCCGCCGTGATTGGGCTTGTTCTAGCCGGACTTCTGTTGGTTTAA

Protein sequence

MLPLNFLLFLNFLLLISPSSTSAAAPARLLDDTTIPTTPADPTVKCAPCEQNQPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSPSFMYITGPPGDLYPIDRNYNAAGRRSTAAAASAVIGLVLAGLLLV

Homology

[Close]

BLAST of Cla97C01G006370 vs. NCBI nr
Match: XP_008467156.1 (PREDICTED: extensin-like [Cucumis melo])

HSP 1 Score: 213.4 bits (542), Expect = 1.3e-51
Identity = 122/145 (84.14%), Postives = 128/145 (88.28%), Query Frame = 0


Query: 1   MLPLNFLLFLNFLLLISPSSTSAAAPARLLDDTTIPTTPADPTVKCAPCEQNQPSPPPPV 60
           MLPL FLLFLNFLLLISPSS   +A  R LDDT   TTP DP VKCAPCEQN PSPPPP+
Sbjct: 1   MLPLKFLLFLNFLLLISPSSALTSATVRRLDDT---TTPTDPNVKCAPCEQNPPSPPPPL 60

Query: 61  VYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSPSFMYITGPPGDLYPIDRNYN 120
           VYPSPPPPSPPPPDVVPYYSPPPPKKKEPK+PNCPPPPSPSFMYITGPPGDLYPID+NYN
Sbjct: 61  VYPSPPPPSPPPPDVVPYYSPPPPKKKEPKNPNCPPPPSPSFMYITGPPGDLYPIDQNYN 120

Query: 121 AAGRRSTAAAASAVIGLVLAGLLLV 146
           AAGRRS AAAA   +G+VLAGLLLV
Sbjct: 121 AAGRRSAAAAA---VGVVLAGLLLV 139

[Close]

BLAST of Cla97C01G006370 vs. NCBI nr
Match: XP_004150475.1 (leucine-rich repeat extensin-like protein 6 [Cucumis sativus] >KGN51515.1 hypothetical protein Csa_009313 [Cucumis sativus])

HSP 1 Score: 208.8 bits (530), Expect = 3.2e-50
Identity = 120/145 (82.76%), Postives = 125/145 (86.21%), Query Frame = 0


Query: 1   MLPLNFLLFLNFLLLISPSSTSAAAPARLLDDTTIPTTPADPTVKCAPCEQNQPSPPPPV 60
           MLPL FLLFLNFLLLISPSS   +   R LDDT   TTP DP VKCAPCEQN PSPPPPV
Sbjct: 1   MLPLKFLLFLNFLLLISPSSALTSVTVRRLDDT---TTPTDPNVKCAPCEQNPPSPPPPV 60

Query: 61  VYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSPSFMYITGPPGDLYPIDRNYN 120
           VYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSPSFMYITGPPGDLYPID+ YN
Sbjct: 61  VYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSPSFMYITGPPGDLYPIDQGYN 120

Query: 121 AAGRRSTAAAASAVIGLVLAGLLLV 146
           AAGRRS    A+ V+G+VLAGLLLV
Sbjct: 121 AAGRRS----AATVVGVVLAGLLLV 138

[Close]

BLAST of Cla97C01G006370 vs. NCBI nr
Match: XP_022989990.1 (leucine-rich repeat extensin-like protein 3 [Cucurbita maxima])

HSP 1 Score: 189.1 bits (479), Expect = 2.6e-44
Identity = 111/145 (76.55%), Postives = 124/145 (85.52%), Query Frame = 0


Query: 1   MLPLNFLLFLNFLLLISPSSTSAAAPARLLDDTTIPTTPADPTVKCAPCEQNQPSPPPPV 60
           MLP N LLFL  LLLISPSS+SAA   R LDDT +  TPADPTVKC+PCEQN PSPPPP 
Sbjct: 1   MLPFNSLLFLTLLLLISPSSSSAA--VRRLDDTPVSATPADPTVKCSPCEQNPPSPPPPP 60

Query: 61  VYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSPSFMYITGPPGDLYPIDRNYN 120
           VYPSPPPPSPPPPDVV YYSPPPP KK+ K+ +CPPPPSP+FMYITGPPGDLYPID+NYN
Sbjct: 61  VYPSPPPPSPPPPDVVVYYSPPPP-KKDHKNNDCPPPPSPNFMYITGPPGDLYPIDQNYN 120

Query: 121 AAGRRSTAAAASAVIGLVLAGLLLV 146
           AA RR  +AAASAVIGL +AG+L++
Sbjct: 121 AAARRLVSAAASAVIGLAVAGVLMI 142

[Close]

BLAST of Cla97C01G006370 vs. NCBI nr
Match: KAG7032543.1 (hypothetical protein SDJN02_06592, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 181.0 bits (458), Expect = 7.2e-42
Identity = 107/145 (73.79%), Postives = 122/145 (84.14%), Query Frame = 0


Query: 1   MLPLNFLLFLNFLLLISPSSTSAAAPARLLDDTTIPTTPADPTVKCAPCEQNQPSPPPPV 60
           MLP N LLFL  LLLISPSS+SAA   R LDD     TPADPTVKC+PCEQN PSPPPP 
Sbjct: 1   MLPFNSLLFLALLLLISPSSSSAA--VRRLDD-----TPADPTVKCSPCEQNPPSPPPPP 60

Query: 61  VYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSPSFMYITGPPGDLYPIDRNYN 120
           VYPSPPPPSPPPPDVV YYSPPPP KK+ K+ +CPPPP+P+FMYITGPPGDLYPID++YN
Sbjct: 61  VYPSPPPPSPPPPDVVIYYSPPPPPKKDHKNDDCPPPPAPNFMYITGPPGDLYPIDQSYN 120

Query: 121 AAGRRSTAAAASAVIGLVLAGLLLV 146
           AA RR  +AAASAV+GL +AG+L++
Sbjct: 121 AASRRLVSAAASAVVGLAVAGVLMM 138

[Close]

BLAST of Cla97C01G006370 vs. NCBI nr
Match: KAG6601837.1 (hypothetical protein SDJN03_07070, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 179.5 bits (454), Expect = 2.1e-41
Identity = 106/145 (73.10%), Postives = 121/145 (83.45%), Query Frame = 0


Query: 1   MLPLNFLLFLNFLLLISPSSTSAAAPARLLDDTTIPTTPADPTVKCAPCEQNQPSPPPPV 60
           MLP N LLFL  LLLISPSS+SAA   R LDD     TPADPTVKC+PCEQN PSPPPP 
Sbjct: 1   MLPFNSLLFLALLLLISPSSSSAA--VRRLDD-----TPADPTVKCSPCEQNPPSPPPPP 60

Query: 61  VYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSPSFMYITGPPGDLYPIDRNYN 120
           VYPSPPPPSPPPPDVV YYSPPPP KK+ K+ +CPPPP+P+FMYITGPPGDLYPID++YN
Sbjct: 61  VYPSPPPPSPPPPDVVIYYSPPPPPKKDHKNDDCPPPPAPNFMYITGPPGDLYPIDQSYN 120

Query: 121 AAGRRSTAAAASAVIGLVLAGLLLV 146
           AA RR  +AAASAV+GL + G+L++
Sbjct: 121 AAARRLVSAAASAVVGLAVVGVLMM 138

[Close]

BLAST of Cla97C01G006370 vs. ExPASy TrEMBL
Match: A0A1S3CT22 (extensin-like OS=Cucumis melo OX=3656 GN=LOC103504576 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 6.3e-52
Identity = 122/145 (84.14%), Postives = 128/145 (88.28%), Query Frame = 0


Query: 1   MLPLNFLLFLNFLLLISPSSTSAAAPARLLDDTTIPTTPADPTVKCAPCEQNQPSPPPPV 60
           MLPL FLLFLNFLLLISPSS   +A  R LDDT   TTP DP VKCAPCEQN PSPPPP+
Sbjct: 1   MLPLKFLLFLNFLLLISPSSALTSATVRRLDDT---TTPTDPNVKCAPCEQNPPSPPPPL 60

Query: 61  VYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSPSFMYITGPPGDLYPIDRNYN 120
           VYPSPPPPSPPPPDVVPYYSPPPPKKKEPK+PNCPPPPSPSFMYITGPPGDLYPID+NYN
Sbjct: 61  VYPSPPPPSPPPPDVVPYYSPPPPKKKEPKNPNCPPPPSPSFMYITGPPGDLYPIDQNYN 120

Query: 121 AAGRRSTAAAASAVIGLVLAGLLLV 146
           AAGRRS AAAA   +G+VLAGLLLV
Sbjct: 121 AAGRRSAAAAA---VGVVLAGLLLV 139

[Close]

BLAST of Cla97C01G006370 vs. ExPASy TrEMBL
Match: A0A0A0KPJ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G571580 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 1.6e-50
Identity = 120/145 (82.76%), Postives = 125/145 (86.21%), Query Frame = 0


Query: 1   MLPLNFLLFLNFLLLISPSSTSAAAPARLLDDTTIPTTPADPTVKCAPCEQNQPSPPPPV 60
           MLPL FLLFLNFLLLISPSS   +   R LDDT   TTP DP VKCAPCEQN PSPPPPV
Sbjct: 1   MLPLKFLLFLNFLLLISPSSALTSVTVRRLDDT---TTPTDPNVKCAPCEQNPPSPPPPV 60

Query: 61  VYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSPSFMYITGPPGDLYPIDRNYN 120
           VYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSPSFMYITGPPGDLYPID+ YN
Sbjct: 61  VYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSPSFMYITGPPGDLYPIDQGYN 120

Query: 121 AAGRRSTAAAASAVIGLVLAGLLLV 146
           AAGRRS    A+ V+G+VLAGLLLV
Sbjct: 121 AAGRRS----AATVVGVVLAGLLLV 138

[Close]

BLAST of Cla97C01G006370 vs. ExPASy TrEMBL
Match: A0A6J1JNW0 (leucine-rich repeat extensin-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111487018 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 1.3e-44
Identity = 111/145 (76.55%), Postives = 124/145 (85.52%), Query Frame = 0


Query: 1   MLPLNFLLFLNFLLLISPSSTSAAAPARLLDDTTIPTTPADPTVKCAPCEQNQPSPPPPV 60
           MLP N LLFL  LLLISPSS+SAA   R LDDT +  TPADPTVKC+PCEQN PSPPPP 
Sbjct: 1   MLPFNSLLFLTLLLLISPSSSSAA--VRRLDDTPVSATPADPTVKCSPCEQNPPSPPPPP 60

Query: 61  VYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSPSFMYITGPPGDLYPIDRNYN 120
           VYPSPPPPSPPPPDVV YYSPPPP KK+ K+ +CPPPPSP+FMYITGPPGDLYPID+NYN
Sbjct: 61  VYPSPPPPSPPPPDVVVYYSPPPP-KKDHKNNDCPPPPSPNFMYITGPPGDLYPIDQNYN 120

Query: 121 AAGRRSTAAAASAVIGLVLAGLLLV 146
           AA RR  +AAASAVIGL +AG+L++
Sbjct: 121 AAARRLVSAAASAVIGLAVAGVLMI 142

[Close]

BLAST of Cla97C01G006370 vs. ExPASy TrEMBL
Match: A0A6J1GMY1 (extensin OS=Cucurbita moschata OX=3662 GN=LOC111455867 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 1.0e-41
Identity = 106/145 (73.10%), Postives = 121/145 (83.45%), Query Frame = 0


Query: 1   MLPLNFLLFLNFLLLISPSSTSAAAPARLLDDTTIPTTPADPTVKCAPCEQNQPSPPPPV 60
           MLP N LLFL  LLLISPSS+SAA   R LDD     TPADPTVKC+PCEQN PSPPPP 
Sbjct: 1   MLPFNSLLFLALLLLISPSSSSAA--VRRLDD-----TPADPTVKCSPCEQNPPSPPPPP 60

Query: 61  VYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSPSFMYITGPPGDLYPIDRNYN 120
           VYPSPPPPSPPPPDVV YYSPPPP KK+ K+ +CPPPP+P+FMYITGPPGDLYPID++YN
Sbjct: 61  VYPSPPPPSPPPPDVVIYYSPPPPPKKDHKNDDCPPPPAPNFMYITGPPGDLYPIDQSYN 120

Query: 121 AAGRRSTAAAASAVIGLVLAGLLLV 146
           AA RR  + AASAV+GL +AG+L++
Sbjct: 121 AASRRLVSTAASAVVGLAVAGVLMM 138

[Close]

BLAST of Cla97C01G006370 vs. ExPASy TrEMBL
Match: A0A6J1DDL2 (acrosin OS=Momordica charantia OX=3673 GN=LOC111020062 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 2.5e-40
Identity = 106/148 (71.62%), Postives = 122/148 (82.43%), Query Frame = 0


Query: 1   MLPLNFLLFLNFLLLISPSSTSAA-APARLLDDT-TIPTTPADPTVKCAPCEQNQPSPPP 60
           MLPL  LLFLN LLLISPS+T+AA A AR LD+   +P+T  DPTVKCAPC+QN PSPPP
Sbjct: 1   MLPLKSLLFLNLLLLISPSATAAASAAARFLDEAPAVPSTTGDPTVKCAPCDQNPPSPPP 60

Query: 61  PVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPP-SPSFMYITGPPGDLYPIDR 120
           P +YPSPPPPSPPPPDV+PYYSPPPPKK +  + NCPPPP  PSF YITGPPGDLYPID+
Sbjct: 61  PPIYPSPPPPSPPPPDVLPYYSPPPPKKPK-NNDNCPPPPYPPSFTYITGPPGDLYPIDQ 120

Query: 121 NYNAAGRRSTAAAASAVIGLVLAGLLLV 146
           +YNAA R  T+AAA+AV+GL L GL +V
Sbjct: 121 DYNAAARTLTSAAAAAVVGLGLVGLFVV 147

[Close]

BLAST of Cla97C01G006370 vs. TAIR 10
Match: AT1G23040.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 67.4 bits (163), Expect = 1.1e-11
Identity = 60/131 (45.80%), Postives = 78/131 (59.54%), Query Frame = 0


Query: 14  LLISPSSTSAAAPARLLDDTTIPTTPADPTVKCAP-CEQNQPSPPPPVVYPSPPPPSPPP 73
           L+   SS+ A+  AR LD+        DP +KC+P C QN P P PP   PSPPPP+ PP
Sbjct: 27  LINGSSSSDASLEARKLDE-------VDP-IKCSPSCIQNPPPPSPPP--PSPPPPACPP 86

Query: 74  PDVVPYYSPPPPKKKEPKSPNCPPPPSPSFMYITGPPGDLYPIDRNYNAAGRRSTAAAAS 133
           P  +P   PPPPKK    S  CPPPP  +F+YITGPPG+LYP+D  + AA  +S      
Sbjct: 87  PPALP---PPPPKK---VSSYCPPPPPANFLYITGPPGNLYPVDEQFGAAAGKSFMVV-- 139

Query: 134 AVIGLVLAGLL 144
            + GL+  G++
Sbjct: 147 KLSGLIAFGIM 139

[Close]

BLAST of Cla97C01G006370 vs. TAIR 10
Match: AT1G70990.1 (proline-rich family protein )

HSP 1 Score: 60.1 bits (144), Expect = 1.7e-09
Identity = 57/143 (39.86%), Postives = 76/143 (53.15%), Query Frame = 0


Query: 4   LNFLLFLNFLLLISPSSTSAAAPARLLDDTTIPTTPADPTVKCAPCEQNQPSPPPPVVYP 63
           L  ++FL F ++I+ S           D +T      DP +KC PC QN P        P
Sbjct: 54  LTTVVFLTFPMIINAS-----------DSSTNRKLEEDP-IKCTPCLQNIPP-------P 113

Query: 64  SPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSPSFMYITGPPGDLYPIDRNYNAAG 123
           SPPPPSPPPP       PPP     PK   CPPPPS +++Y+TGPPG+LYPID+ + AA 
Sbjct: 114 SPPPPSPPPPSQA--CPPPPLPPSPPKKSYCPPPPS-TYIYMTGPPGELYPIDQQFGAAV 173

Query: 124 RRS-TAAAASAVIGLVLAGLLLV 146
            +S T    S +I   +   L++
Sbjct: 174 TKSFTVVKISGLIAFGVMSFLMI 174

[Close]

BLAST of Cla97C01G006370 vs. TAIR 10
Match: AT1G02405.1 (proline-rich family protein )

HSP 1 Score: 55.1 bits (131), Expect = 5.6e-08
Identity = 54/111 (48.65%), Postives = 64/111 (57.66%), Query Frame = 0


Query: 40  ADPTVKCAPCEQNQPSPPPPVVYPSPPP----PSPPPPDVVPYYSPPPPKKKE-PKSPNC 99
           A+  V C PC QNQP PP     PSPPP    PSPPPP      SPPPPKK   P SP  
Sbjct: 35  AEVDVNCIPCLQNQPPPP-----PSPPPPSCTPSPPPP------SPPPPKKSSCPPSPLP 94

Query: 100 PPPPSPSFMYI-TGPPGDLYPIDRNYNAAGRRSTAAAASAVIGLVLAGLLL 145
           PPPP P   Y+ T PPGDLYPI+  Y AA     A  + +V+ L + G+++
Sbjct: 95  PPPPPPPPNYVFTYPPGDLYPIENYYGAA----VAVESFSVMKLFVFGVMV 130

The following BLAST results are available for this feature:

BLAST of Cla97C01G006370 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008467156.1	1.3e-51	84.14	PREDICTED: extensin-like [Cucumis melo]	[more]
XP_004150475.1	3.2e-50	82.76	leucine-rich repeat extensin-like protein 6 [Cucumis sativus] >KGN51515.1 hypoth...	[more]
XP_022989990.1	2.6e-44	76.55	leucine-rich repeat extensin-like protein 3 [Cucurbita maxima]	[more]
KAG7032543.1	7.2e-42	73.79	hypothetical protein SDJN02_06592, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6601837.1	2.1e-41	73.10	hypothetical protein SDJN03_07070, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Cla97C01G006370 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cla97C01G006370 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CT22	6.3e-52	84.14	extensin-like OS=Cucumis melo OX=3656 GN=LOC103504576 PE=4 SV=1	[more]
A0A0A0KPJ1	1.6e-50	82.76	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G571580 PE=4 SV=1	[more]
A0A6J1JNW0	1.3e-44	76.55	leucine-rich repeat extensin-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1GMY1	1.0e-41	73.10	extensin OS=Cucurbita moschata OX=3662 GN=LOC111455867 PE=4 SV=1	[more]
A0A6J1DDL2	2.5e-40	71.62	acrosin OS=Momordica charantia OX=3673 GN=LOC111020062 PE=4 SV=1	[more]

BLAST of Cla97C01G006370 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G23040.1	1.1e-11	45.80	hydroxyproline-rich glycoprotein family protein	[more]
AT1G70990.1	1.7e-09	39.86	proline-rich family protein	[more]
AT1G02405.1	5.6e-08	48.65	proline-rich family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..107
None	No IPR available	PANTHER	PTHR35094	LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 2	coord: 7..143
None	No IPR available	PANTHER	PTHR35094:SF1	LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 2	coord: 7..143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C01G006370.1	Cla97C01G006370.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane