Cla97C01G004060 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C01G004060
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	14 kDa proline-rich protein DC2.15-like
Location	Cla97Chr01: 4003276 .. 4003542 (+)
RNA-Seq Expression	Cla97C01G004060
Synteny	Cla97C01G004060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCAAAAGCTACTGTCACCTCTCTCGCATTCCTCCTCGCTCTCATTCTCTTCTCATTATCCTCCTTCGTTTCCTCTTGCATCGACGACTGCTACATTCCGTCCAATGCTACACCTACACCTTCACCTTTACCTTCTACCGAGGAGGGAAAAAGATGCCCAAGAGACACTCTTAAATTCCGTATTTGCTCGAAATTGCTCGACGCTCGCACCGACGTTACCAGTGACAAGCGACCGGGGCACTCTAATGGAAGGGCTCATTGA

mRNA sequence

ATGGCTTCAAAAGCTACTGTCACCTCTCTCGCATTCCTCCTCGCTCTCATTCTCTTCTCATTATCCTCCTTCGTTTCCTCTTGCATCGACGACTGCTACATTCCGTCCAATGCTACACCTACACCTTCACCTTTACCTTCTACCGAGGAGGGAAAAAGATGCCCAAGAGACACTCTTAAATTCCGTATTTGCTCGAAATTGCTCGACGCTCGCACCGACGTTACCAGTGACAAGCGACCGGGGCACTCTAATGGAAGGGCTCATTGA

Coding sequence (CDS)

ATGGCTTCAAAAGCTACTGTCACCTCTCTCGCATTCCTCCTCGCTCTCATTCTCTTCTCATTATCCTCCTTCGTTTCCTCTTGCATCGACGACTGCTACATTCCGTCCAATGCTACACCTACACCTTCACCTTTACCTTCTACCGAGGAGGGAAAAAGATGCCCAAGAGACACTCTTAAATTCCGTATTTGCTCGAAATTGCTCGACGCTCGCACCGACGTTACCAGTGACAAGCGACCGGGGCACTCTAATGGAAGGGCTCATTGA

Protein sequence

MASKATVTSLAFLLALILFSLSSFVSSCIDDCYIPSNATPTPSPLPSTEEGKRCPRDTLKFRICSKLLDARTDVTSDKRPGHSNGRAH

Homology

[Close]

BLAST of Cla97C01G004060 vs. NCBI nr
Match: XP_038876273.1 (14 kDa proline-rich protein DC2.15-like [Benincasa hispida])

HSP 1 Score: 105.5 bits (262), Expect = 2.3e-19
Identity = 59/80 (73.75%), Postives = 63/80 (78.75%), Query Frame = 0


Query: 1  MASKATVTSLAFLLALILFSLSSFVSSCIDDCYIPSNATPTPSPLPSTEEGKRCPRDTLK 60
          MASKA+V S A LL L L SL S VSSC  DCY PSN TPTPSPLPS+EEGKRCP+DTLK
Sbjct: 1  MASKASVASFALLLTLNLLSL-SLVSSC-SDCYDPSNPTPTPSPLPSSEEGKRCPKDTLK 60

Query: 61 FRICSKLLDARTDVTSDKRP 81
          F IC+KLL  RTDV  DKRP
Sbjct: 61 FGICAKLLKGRTDVAIDKRP 78

[Close]

BLAST of Cla97C01G004060 vs. NCBI nr
Match: KAA0039696.1 (14 kDa proline-rich protein DC2.15-like [Cucumis melo var. makuwa])

HSP 1 Score: 67.0 bits (162), Expect = 9.2e-08
Identity = 45/81 (55.56%), Postives = 56/81 (69.14%), Query Frame = 0


Query: 1  MASKATVTSLAFLLALILFSLSSFVSSCIDDCYIPSNATPTPSPLPSTEEGKRCPRDTLK 60
          MASK T TSLAFL   I+ S S+FVS     CY  SN  PTPS   +++ GK+CP+DTLK
Sbjct: 1  MASKVT-TSLAFLFTFIILS-STFVS-----CYDTSNPRPTPS---TSKAGKKCPKDTLK 60

Query: 61 FRICSKLLDARTDVTS-DKRP 81
          F ICS+LL  +TDV + +KRP
Sbjct: 61 FEICSELLKGQTDVVAIEKRP 71

[Close]

BLAST of Cla97C01G004060 vs. NCBI nr
Match: XP_022154816.1 (14 kDa proline-rich protein DC2.15-like [Momordica charantia])

HSP 1 Score: 67.0 bits (162), Expect = 9.2e-08
Identity = 42/80 (52.50%), Postives = 55/80 (68.75%), Query Frame = 0


Query: 1  MASKATVTSLAFLLALILFSLSSFVSSCIDDCYIPSNATPTPSPLPSTEEGKRCPRDTLK 60
          MASKA + SLAFLL+L L  L S +++C +DCY PS+  PTPSP    E+GK+CP++TLK
Sbjct: 1  MASKA-IASLAFLLSLNL--LLSLIAAC-NDCYAPSHPHPTPSP----EQGKKCPKNTLK 60

Query: 61 FRICSKLLDARTDVTSDKRP 81
            +C+KLL    DVT    P
Sbjct: 61 LGVCAKLLGGLVDVTIGHPP 72

[Close]

BLAST of Cla97C01G004060 vs. NCBI nr
Match: XP_022154817.1 (14 kDa proline-rich protein DC2.15-like [Momordica charantia])

HSP 1 Score: 64.7 bits (156), Expect = 4.6e-07
Identity = 42/80 (52.50%), Postives = 55/80 (68.75%), Query Frame = 0


Query: 1  MASKATVTSLAFLLALILFSLSSFVSSCIDDCYIPSNATPTPSPLPSTEEGKRCPRDTLK 60
          MASKAT  SLAFLL+L L  L S V++C +DCY PS+  PTPSP    E+GK+CP++TLK
Sbjct: 1  MASKAT-ASLAFLLSLNL--LLSLVTAC-NDCYAPSHPHPTPSP----EQGKKCPKNTLK 60

Query: 61 FRICSKLLDARTDVTSDKRP 81
            +C+KLL    +V+    P
Sbjct: 61 LGVCAKLLGGLVNVSIGHPP 72

[Close]

BLAST of Cla97C01G004060 vs. NCBI nr
Match: XP_022969913.1 (14 kDa proline-rich protein DC2.15-like [Cucurbita maxima])

HSP 1 Score: 64.7 bits (156), Expect = 4.6e-07
Identity = 46/84 (54.76%), Postives = 52/84 (61.90%), Query Frame = 0


Query: 1  MASKATVTSLAFLLALILFSLSSFVSSCIDDCYIPSNATPTPS----PLPSTEEGKRCPR 60
          MASKAT  SLAFLL+L L    S VS+C  DCY+PS   P P     P PS+  GK CPR
Sbjct: 1  MASKAT-ASLAFLLSLNLL-FFSLVSAC-SDCYVPSPPMPNPCPPTVPTPSSGHGK-CPR 60

Query: 61 DTLKFRICSKLLDARTDVTSDKRP 81
          DTLK  +C+KLL    DVT  K P
Sbjct: 61 DTLKLGVCAKLLRGLVDVTIGKPP 80

[Close]

BLAST of Cla97C01G004060 vs. ExPASy TrEMBL
Match: A0A5A7TCB2 (14 kDa proline-rich protein DC2.15-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold558G00270 PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 4.5e-08
Identity = 45/81 (55.56%), Postives = 56/81 (69.14%), Query Frame = 0


Query: 1  MASKATVTSLAFLLALILFSLSSFVSSCIDDCYIPSNATPTPSPLPSTEEGKRCPRDTLK 60
          MASK T TSLAFL   I+ S S+FVS     CY  SN  PTPS   +++ GK+CP+DTLK
Sbjct: 1  MASKVT-TSLAFLFTFIILS-STFVS-----CYDTSNPRPTPS---TSKAGKKCPKDTLK 60

Query: 61 FRICSKLLDARTDVTS-DKRP 81
          F ICS+LL  +TDV + +KRP
Sbjct: 61 FEICSELLKGQTDVVAIEKRP 71

[Close]

BLAST of Cla97C01G004060 vs. ExPASy TrEMBL
Match: A0A6J1DPV0 (14 kDa proline-rich protein DC2.15-like OS=Momordica charantia OX=3673 GN=LOC111021978 PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 4.5e-08
Identity = 42/80 (52.50%), Postives = 55/80 (68.75%), Query Frame = 0


Query: 1  MASKATVTSLAFLLALILFSLSSFVSSCIDDCYIPSNATPTPSPLPSTEEGKRCPRDTLK 60
          MASKA + SLAFLL+L L  L S +++C +DCY PS+  PTPSP    E+GK+CP++TLK
Sbjct: 1  MASKA-IASLAFLLSLNL--LLSLIAAC-NDCYAPSHPHPTPSP----EQGKKCPKNTLK 60

Query: 61 FRICSKLLDARTDVTSDKRP 81
            +C+KLL    DVT    P
Sbjct: 61 LGVCAKLLGGLVDVTIGHPP 72

[Close]

BLAST of Cla97C01G004060 vs. ExPASy TrEMBL
Match: A0A6J1I2B7 (14 kDa proline-rich protein DC2.15-like OS=Cucurbita maxima OX=3661 GN=LOC111468966 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.2e-07
Identity = 46/84 (54.76%), Postives = 52/84 (61.90%), Query Frame = 0


Query: 1  MASKATVTSLAFLLALILFSLSSFVSSCIDDCYIPSNATPTPS----PLPSTEEGKRCPR 60
          MASKAT  SLAFLL+L L    S VS+C  DCY+PS   P P     P PS+  GK CPR
Sbjct: 1  MASKAT-ASLAFLLSLNLL-FFSLVSAC-SDCYVPSPPMPNPCPPTVPTPSSGHGK-CPR 60

Query: 61 DTLKFRICSKLLDARTDVTSDKRP 81
          DTLK  +C+KLL    DVT  K P
Sbjct: 61 DTLKLGVCAKLLRGLVDVTIGKPP 80

[Close]

BLAST of Cla97C01G004060 vs. ExPASy TrEMBL
Match: A0A6J1DMQ5 (14 kDa proline-rich protein DC2.15-like OS=Momordica charantia OX=3673 GN=LOC111021979 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.2e-07
Identity = 42/80 (52.50%), Postives = 55/80 (68.75%), Query Frame = 0


Query: 1  MASKATVTSLAFLLALILFSLSSFVSSCIDDCYIPSNATPTPSPLPSTEEGKRCPRDTLK 60
          MASKAT  SLAFLL+L L  L S V++C +DCY PS+  PTPSP    E+GK+CP++TLK
Sbjct: 1  MASKAT-ASLAFLLSLNL--LLSLVTAC-NDCYAPSHPHPTPSP----EQGKKCPKNTLK 60

Query: 61 FRICSKLLDARTDVTSDKRP 81
            +C+KLL    +V+    P
Sbjct: 61 LGVCAKLLGGLVNVSIGHPP 72

[Close]

BLAST of Cla97C01G004060 vs. ExPASy TrEMBL
Match: A0A6J1I2C7 (14 kDa proline-rich protein DC2.15-like OS=Cucurbita maxima OX=3661 GN=LOC111468975 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.9e-07
Identity = 46/84 (54.76%), Postives = 52/84 (61.90%), Query Frame = 0


Query: 1  MASKATVTSLAFLLALILFSLSSFVSSCIDDCYIPSNATPTPS----PLPSTEEGKRCPR 60
          MASKAT  SLAFLL+L L    S VS+C  DCY+PS   P P     P PS+  GK CPR
Sbjct: 1  MASKAT-PSLAFLLSLNLL-FFSLVSAC-SDCYVPSPPMPNPCPPTVPTPSSGHGK-CPR 60

Query: 61 DTLKFRICSKLLDARTDVTSDKRP 81
          DTLK  +C+KLL    DVT  K P
Sbjct: 61 DTLKLGVCAKLLRGLVDVTIGKPP 80

[Close]

BLAST of Cla97C01G004060 vs. TAIR 10
Match: AT1G12090.1 (extensin-like protein )

HSP 1 Score: 42.4 bits (98), Expect = 2.3e-04
Identity = 32/84 (38.10%), Postives = 42/84 (50.00%), Query Frame = 0


Query: 1  MASKATVTSLAFLLALILFSLSSFVSSCI---DDCYIPSNATPTPSPLPSTEEG-KRCPR 60
          MAS +    LA  L L+ F+  S   SC      C  P    PTP P PS   G  +CP+
Sbjct: 1  MASSSIALFLA--LNLLFFTTISACGSCTPCGGGCPSP-KPKPTPKPTPSPSSGSSKCPK 60

Query: 61 DTLKFRICSKLLDARTDVTSDKRP 81
          DTLK  +C+ +L+   D+T  K P
Sbjct: 61 DTLKLGVCANVLNGLLDLTLGKPP 81

The following BLAST results are available for this feature:

BLAST of Cla97C01G004060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876273.1	2.3e-19	73.75	14 kDa proline-rich protein DC2.15-like [Benincasa hispida]	[more]
KAA0039696.1	9.2e-08	55.56	14 kDa proline-rich protein DC2.15-like [Cucumis melo var. makuwa]	[more]
XP_022154816.1	9.2e-08	52.50	14 kDa proline-rich protein DC2.15-like [Momordica charantia]	[more]
XP_022154817.1	4.6e-07	52.50	14 kDa proline-rich protein DC2.15-like [Momordica charantia]	[more]
XP_022969913.1	4.6e-07	54.76	14 kDa proline-rich protein DC2.15-like [Cucurbita maxima]	[more]

BLAST of Cla97C01G004060 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cla97C01G004060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TCB2	4.5e-08	55.56	14 kDa proline-rich protein DC2.15-like OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A6J1DPV0	4.5e-08	52.50	14 kDa proline-rich protein DC2.15-like OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1I2B7	2.2e-07	54.76	14 kDa proline-rich protein DC2.15-like OS=Cucurbita maxima OX=3661 GN=LOC111468...	[more]
A0A6J1DMQ5	2.2e-07	52.50	14 kDa proline-rich protein DC2.15-like OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1I2C7	2.9e-07	54.76	14 kDa proline-rich protein DC2.15-like OS=Cucurbita maxima OX=3661 GN=LOC111468...	[more]

BLAST of Cla97C01G004060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G12090.1	2.3e-04	38.10	extensin-like protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..28 score: 5.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C01G004060.1	Cla97C01G004060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding