Cla97C01G003085 (gene) Watermelon (97103) v2.5

Overview
NameCla97C01G003085
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionUnknown protein
LocationCla97Chr01: 2880627 .. 2881187 (-)
RNA-Seq ExpressionCla97C01G003085
SyntenyCla97C01G003085
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAACCTCCATTTTCTTTCTCCTCTTTCTTCTTTCTCTTTTCTCCTTCCATTTCCTCTCCATTGCAGCTTCTTTTCACTTCCACAAAAATGGTCTCACTCTTTCTTCGGACGACGATAATGATTGGGAATTTGTCATGAACCCCAACACTTTTAGCTCCCGCATTTGGATTGGAAACAACTGTAAATTTGACGAATTCGGGCAGCGCCACAAATGTCGAACCGTTGACTGTGACGGTGGCAACGGTGGTGGCAACTTCCTTCAAAGCCGAGCTTATGTGGACCGGGGCGGTGGCAGCCTTTTCCGGTGGCGAGCTTACGCAGATGACATCTTCAAATATGTGTCAAACAAATTGAATAATAATGTTGGGAGTAGCAATAGTTTAGTTAAATTATTGTTATTTGTGCTCGTTCTTTAATTTCTTCGTTATGAAAAATACTTAGGGGTATCCTAAACACTTTCATTTCATTTAAATCAGTGTGAGTTTGAAAATGACGCTTGTAGTTTTCATCTTGAACTGCTTGTGAAAAACAACTTCAAGGAGTTTGATGAGATATAA

mRNA sequence

ATGGGAACCTCCATTTTCTTTCTCCTCTTTCTTCTTTCTCTTTTCTCCTTCCATTTCCTCTCCATTGCAGCTTCTTTTCACTTCCACAAAAATGGTCTCACTCTTTCTTCGGACGACGATAATGATTGGGAATTTGTCATGAACCCCAACACTTTTAGCTCCCGCATTTGGATTGGAAACAACTGTAAATTTGACGAATTCGGGCAGCGCCACAAATGTCGAACCGTTGACTGTGACGGTGGCAACGGTGGTGGCAACTTCCTTCAAAGCCGAGCTTATGTGGACCGGGGCGGTGGCAGCCTTTTCCGGTGGCGAGCTTACGCAGATGACATCTTCAAATATGTGTCAAACAAATTGAATAATAATGTTGGGAGTAGCAATAGTTTAGTTAAATTATTGTTATTTGTGCTCTGTGAGTTTGAAAATGACGCTTGTAGTTTTCATCTTGAACTGCTTGTGAAAAACAACTTCAAGGAGTTTGATGAGATATAA

Coding sequence (CDS)

ATGGGAACCTCCATTTTCTTTCTCCTCTTTCTTCTTTCTCTTTTCTCCTTCCATTTCCTCTCCATTGCAGCTTCTTTTCACTTCCACAAAAATGGTCTCACTCTTTCTTCGGACGACGATAATGATTGGGAATTTGTCATGAACCCCAACACTTTTAGCTCCCGCATTTGGATTGGAAACAACTGTAAATTTGACGAATTCGGGCAGCGCCACAAATGTCGAACCGTTGACTGTGACGGTGGCAACGGTGGTGGCAACTTCCTTCAAAGCCGAGCTTATGTGGACCGGGGCGGTGGCAGCCTTTTCCGGTGGCGAGCTTACGCAGATGACATCTTCAAATATGTGTCAAACAAATTGAATAATAATGTTGGGAGTAGCAATAGTTTAGTTAAATTATTGTTATTTGTGCTCTGTGAGTTTGAAAATGACGCTTGTAGTTTTCATCTTGAACTGCTTGTGAAAAACAACTTCAAGGAGTTTGATGAGATATAA

Protein sequence

MGTSIFFLLFLLSLFSFHFLSIAASFHFHKNGLTLSSDDDNDWEFVMNPNTFSSRIWIGNNCKFDEFGQRHKCRTVDCDGGNGGGNFLQSRAYVDRGGGSLFRWRAYADDIFKYVSNKLNNNVGSSNSLVKLLLFVLCEFENDACSFHLELLVKNNFKEFDEI
Homology
BLAST of Cla97C01G003085 vs. NCBI nr
Match: KGN50133.1 (hypothetical protein Csa_000073 [Cucumis sativus])

HSP 1 Score: 158.3 bits (399), Expect = 5.6e-35
Identity = 90/141 (63.83%), Postives = 106/141 (75.18%), Query Frame = 0

Query: 1   MGTSIFFLLFLLSLFSFHF-LSIAASFHFHKNG-LTLSSDDDND-WEFVMNPNTFSSRIW 60
           MGT IFF LF++SLFSFHF LS AASF  H+NG  T S DD+ND W FVMNPNTFSS IW
Sbjct: 8   MGTPIFFFLFVVSLFSFHFGLSNAASFQVHENGPFTDSLDDNNDYWAFVMNPNTFSSSIW 67

Query: 61  IGNNCKFDEFGQRHKCRTVDCDGGNGGGN-FLQSRAYVDRGGGSLFRWRAYADDIFKYVS 120
           IG  CKFD      KC T DC  G+G  + FLQ +A+VD+GGGS FRWR YA+DI KYV 
Sbjct: 68  IGKKCKFDG-SVCSKCGTGDCSNGDGNDDMFLQKKAFVDKGGGSFFRWRYYANDIAKYVL 127

Query: 121 NKLNNNVGSSNSLVKLLLFVL 138
           +KLN+N+ +S SLVKLL+FV+
Sbjct: 128 DKLNSNIQTSYSLVKLLIFVV 147

BLAST of Cla97C01G003085 vs. NCBI nr
Match: KAG6579490.1 (hypothetical protein SDJN03_23938, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 67.0 bits (162), Expect = 1.7e-07
Identity = 51/115 (44.35%), Postives = 60/115 (52.17%), Query Frame = 0

Query: 1   MGTSI-FFLLFLLSLFSFHFLSIAASFHFHKNGLTLS---SDDDNDWEFVMNPNTFSSRI 60
           MG SI  FL+FLL LFSFH  S AAS     +  TL    SD DN+W FV++P++ SS I
Sbjct: 1   MGASINCFLIFLLYLFSFHVHSNAASSQAISDTQTLRQLISDKDNNWAFVVDPSSDSSWI 60

Query: 61  WIGNNCKFDEFGQRHKCRTVDCDGGNGGGNFLQSRAYVDRGGGSLFRWRAYADDI 112
            +G                         G  LQ RAYVDRG GSL RWRAY D +
Sbjct: 61  SVGT---------------------RDPGGLLQWRAYVDRGRGSLLRWRAYVDQL 94

BLAST of Cla97C01G003085 vs. NCBI nr
Match: KAG6579489.1 (hypothetical protein SDJN03_23937, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 65.9 bits (159), Expect = 3.8e-07
Identity = 59/141 (41.84%), Postives = 78/141 (55.32%), Query Frame = 0

Query: 5   IFFLLFLLSLFSFHFLSIAAS---FHFHKNGLTLSSDDDNDWEFVMNPNTFSSRIWIGNN 64
           +FFLLFLL LFSFHF S AAS       +N   L +D++N   F ++P++  S I +G  
Sbjct: 6   VFFLLFLLHLFSFHFHSHAASSQAISDTQNLRQLINDNNNSRTFYIDPSSGCSCIPVG-- 65

Query: 65  CKFDEFGQRHKCRTVDCDGGNGGGNFLQSRAYV---DRGGGSLFRWRA--YADDIFKYVS 124
                        T D DG       LQ +AY      G GSL  WRA  Y++DI KYVS
Sbjct: 66  -------------TRDTDG------LLQRQAYSYSDTDGRGSLLWWRAYSYSEDIAKYVS 123

Query: 125 NKLNNNVGSSNSLVKLLLFVL 138
           N+LNN   ++ +LVK++LFVL
Sbjct: 126 NQLNN--WTNKNLVKMVLFVL 123

BLAST of Cla97C01G003085 vs. NCBI nr
Match: KAG6579486.1 (hypothetical protein SDJN03_23934, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 65.9 bits (159), Expect = 3.8e-07
Identity = 59/141 (41.84%), Postives = 79/141 (56.03%), Query Frame = 0

Query: 5   IFFLLFLLSLFSFHFLSIAAS---FHFHKNGLTLSSDDDNDWEFVMNPNTFSSRIWIGNN 64
           +FFLLFLL LFSFHF S AAS       +N   L +D++N   F ++P++  S I +GN 
Sbjct: 6   VFFLLFLLHLFSFHFHSHAASSQAISDTQNLRQLINDNNNSRTFHIDPSSGCSCIPVGNR 65

Query: 65  CKFDEFGQRHKCRTVDCDGGNGGGNFLQSRAYV---DRGGGSLFRWRA--YADDIFKYVS 124
                          D DG       LQ +AY      G GSL  WRA  Y++DI KYVS
Sbjct: 66  ---------------DTDG------LLQRQAYSYSDTDGRGSLLWWRAYSYSEDIAKYVS 123

Query: 125 NKLNNNVGSSNSLVKLLLFVL 138
           N+LNN   ++++LVK++LFVL
Sbjct: 126 NQLNNL--TNHNLVKMMLFVL 123

BLAST of Cla97C01G003085 vs. NCBI nr
Match: KAG6579487.1 (hypothetical protein SDJN03_23935, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 63.5 bits (153), Expect = 1.9e-06
Identity = 49/115 (42.61%), Postives = 60/115 (52.17%), Query Frame = 0

Query: 1   MGTSI-FFLLFLLSLFSFHFLSIAA---SFHFHKNGLTLSSDDDNDWEFVMNPNTFSSRI 60
           MG SI  FL+FLL LFSFH  S AA   +    +  L L SD DN+W FV++P++ SS I
Sbjct: 1   MGASINCFLIFLLYLFSFHVHSNAALSQAISDTQTLLQLISDKDNNWAFVVDPSSGSSWI 60

Query: 61  WIGNNCKFDEFGQRHKCRTVDCDGGNGGGNFLQSRAYVDRGGGSLFRWRAYADDI 112
            +G                         G  LQ +AYVDRG GSL RWRAY D +
Sbjct: 61  SVGT---------------------RDPGGLLQWQAYVDRGRGSLLRWRAYVDQL 94

BLAST of Cla97C01G003085 vs. ExPASy TrEMBL
Match: A0A0A0KKL7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G155440 PE=3 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 2.7e-35
Identity = 90/141 (63.83%), Postives = 106/141 (75.18%), Query Frame = 0

Query: 1   MGTSIFFLLFLLSLFSFHF-LSIAASFHFHKNG-LTLSSDDDND-WEFVMNPNTFSSRIW 60
           MGT IFF LF++SLFSFHF LS AASF  H+NG  T S DD+ND W FVMNPNTFSS IW
Sbjct: 8   MGTPIFFFLFVVSLFSFHFGLSNAASFQVHENGPFTDSLDDNNDYWAFVMNPNTFSSSIW 67

Query: 61  IGNNCKFDEFGQRHKCRTVDCDGGNGGGN-FLQSRAYVDRGGGSLFRWRAYADDIFKYVS 120
           IG  CKFD      KC T DC  G+G  + FLQ +A+VD+GGGS FRWR YA+DI KYV 
Sbjct: 68  IGKKCKFDG-SVCSKCGTGDCSNGDGNDDMFLQKKAFVDKGGGSFFRWRYYANDIAKYVL 127

Query: 121 NKLNNNVGSSNSLVKLLLFVL 138
           +KLN+N+ +S SLVKLL+FV+
Sbjct: 128 DKLNSNIQTSYSLVKLLIFVV 147

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN50133.15.6e-3563.83hypothetical protein Csa_000073 [Cucumis sativus][more]
KAG6579490.11.7e-0744.35hypothetical protein SDJN03_23938, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6579489.13.8e-0741.84hypothetical protein SDJN03_23937, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6579486.13.8e-0741.84hypothetical protein SDJN03_23934, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6579487.11.9e-0642.61hypothetical protein SDJN03_23935, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KKL72.7e-3563.83Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G155440 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037176Osmotin/thaumatin-like superfamilySUPERFAMILY49870Osmotin, thaumatin-like proteincoord: 32..81

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C01G003085.1Cla97C01G003085.1mRNA