Cla97C01G001340 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C01G001340
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	E3 ubiquitin-protein ligase MARCH2 isoform X1
Location	Cla97Chr01: 1137085 .. 1140579 (-)
RNA-Seq Expression	Cla97C01G001340
Synteny	Cla97C01G001340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTGAGGGTGTCTTTCAATGTGGGAGTGAGATTTGGCGCCTCAGTTGCTAAAGCAATATCCTTGTTGTGTTTGTTGAAAGCCTACAAAATAACGTGGTTCAATATACTCTTCTCATAAATTACGTAATCTCAGAACCATTTTTTCTTTGCTTTTCAATTCCCACCTAAAAAAGGGAAAAGGGGTTGAAATTTTCCCTATTCCTTTTTCTTATTTCACCTCTATTTCTACTGCTTCAACAGTAGAATCTTCAATCCTTCAAATCTGAGTCTCCCCAGGTACGAACCCTTTTGATTCTATTCGCTTTTGTTCTCGATTTTTGCTACTGTTGCTCTCTTAGCCTCATTTGCTGTGCGTAATGCAATTGCTGCAATGGGATTTTGGGTCTCAGTCGTTTGTTTAGACTGATTCATGTTTGGTTGGAGGGGATTTTGGTTTAATTTTTTTGGTCGGTTTTGATTTCTTGAATTGAGTTTTGTATATTGAGGCTCGTTTGTGATTTTTAAGTTCAATTGCGACATGTAATGCAATCGTTTCAATGTATTTTGTGTATTTTGTCTCTTAGTCGTTTGTTTGGGACTGAAATTAAATGTGGTAGGTGAAAATTTTGTTTCAATTTGTTGGTGGGTTTGTTTCTCTTTATTTGGTGTTGAGGGATAAACACTGAGTTGCAGATATTTCTATTGAATATAGGGTGTGAGAAATTTGGGCAAAGGGATGAATAGATGATGCTGAGAAATGTTAGTCAAAGACTTTTGTTGTTGTATTGATTCAAGTTTGTGGAGTTTGAAATTTGAATGAACCTTCCGATATGTCGGGTTGCCATTCGAATGATGTAAAGGTTAACACCGGCGCCAATCAGAACAATGACGGCGACCTTGAGAAGCAGAGGGTTGCTCAGCCATCATCATCAGCATCTACCAGAGATGCTGATGATAATACACAATTGACAATTGTTGTTTCTACAGGGGAGTCTAAACCAATCTCTGAGGTTCCTGGTCCTGGGACTCTTTGCTCTCAAGAGGGGTTATTGCCTTGTTCAGTTTCCTCAAAAAAGGAGCTCTTGTCCACCACTTCTAGTTCTGATGAGCAGTGCAGGTATATTTGAATTGCTACTCTTCCATGAAAAATGCTCTTCCAATTGTTCTGTTCGTGTCTGCTTGTCCATTTTGGCATCACTTTCAAGTTAGTTCCTCCTTCCTCATGTTGTTGTTATTTATGTTGTTTGTTCATTGCTTGTCAGCCATAAAACATTAGATAGACTCCCATGTTTTCTGGTTGAAAATTGATACTTTCTGTAGTTTGTTAAATCACTGCTAAATCGATAAGGTTAAGCCATGAATCAAATATATGATCTATTTATGTAAATTAGGGGAGGAAATGACTTTGCTGGAGAGGAGAGTTAGACTAAATCTAAAAGCTTAAGTTGATGGAATATATTTAATTTGTTTGCATATAGTCCTAGTAAGATTAGAACTGCAAACGTTAGTATAGCTCAATGCTTCTTCTCCCCTTGAGATTGGAGGTTCAAGTCTCCACCGCACATTTGTTGCACTAAAGACTAAAGAGAAAAGATTAAAGCCCTATTTTTGTACATTGTAGATAACATTTTTTCAAATATTGTTGTCTTTCCATGTAATCTGCATTATAGTGAAGTATGTCCACAGTTACCATTGGCTTCAAGTATCTGGTTAATGTGTGTTGTAAAGGAAGTTGAGGCCATTAAGCCTGAGTACTATTATTCAGAATTTGTCAGCAAGAGAAGGAGGAAGTCTTAATAGAACTTGGATGTCATTGTCGAGGCGGTCTCGCAAAAGCTCATCGGACTTGCATAGATACTTGGTTTCATACTAAAGGATCAAACAGATGTGAGATATGCCAGTAAGTTGCTTTTTGGAAGGATGACTTTCATTAATTTAACATAATCATATCGTTTCGGCCATCGGGGGGCATTTTGAAATGTAATTTTGCTAAGTTTTTCAGGGTTGTAGCGGCAAATGTATCACCTCCACAATCACATCATGGTGTAGGTACTCTGTAGCTCTTGGTGCAATGATTATGATTAGTTTTCAATTCCTAGCATTTTCCATCTTCATTAATCCCAATTGTAAAACTTAAAAAATCATATGTCTCAAGGAATATTGAATTAGTATTTTTGTCTTGACTACGGTGTTAGTGTTATTAGTTAATGATCAACATCATGTTTTAGTTTTGCATTTGCTACAATTCTTCACTTTCTTTTCCCACATCAGGAAAAGAGTTATCATGACATTTTCATCTGAAATCTTTGCTTCTAAATGTTCCTTTTATTTTGAAAGGCTTTATGAAGTAGAATAGTGAATATTTCTAAGTGATGTGTATCATAAGAATTATAGGCAAGGACAATTATGACATACTTGAACAGGATTTGTTCTATAGATTGTACAACTTTGTCCTTGAGTTCTAAAACTTATAGGCGAGGACAAGTGATTCATCATTCACGATTCTTCCTCTCCTAGGTGAATTAGAAATGTTAAGAAAGAAGAGACATGTTAAGTGGCAAAAAGTCACGCGTGCATTAACCCATATACGAACAAAACCAAACTCATAAACTAAATATACGGACATGGAAATTATTATGCTTCTATTTTTCTTTGTATTGTCTTTACCTATAAATTCAAACTATTGATTCATGAAAATTGTATATTTTAGCATTGAACATATGATCTAATGGATGGATATTGCATCGAAATGACCTGAACTTTGATTATTCCTTATTTGACAAGCACAGACCAACTACTGGATTTGGAGGATTGATCCAACCTACAGAACTCAAGATCCCCAAAGGGTAGTAAGACTTCCACTTTTCCAATGATATGCTTGTTTCATTTGTTGTCAAAAAGCCATGAAACCTTGTTCATAATTGTTTATGCAGCAGCACTGCTTCAGTCCACTTTGGCTGGCTTTTGCCATCCTCATAGGAGGTCTGCTACTGGATATTCTTATATCCATAACCCTTGGTGTTTCCGCATTGCCTGTAAATATCATCATTGGTATGTTTTCGTTGATCGAGCTATATCTCTAGTTTCATGTGGAGCTTTTTATGGTTATTGAAACTTTGAAGAACAGGAGTTATTGTGGTGCTTGGACTTGGAACTGTGTTTCGACTTGCCTTGGAGTTCTTTCAAGAATGGAATTCAACAAGAGGATCGCAAAGGGTGGAATCAAATGTCACTATTGGGTATTTTCCAGCTATATAGTCTTTGACTGTCTGTTTAAAAAAGGGAACAAAAAAAAAAAAAAAAAAAGAAAAAGAAAAAGAAAAGATATATAAATAAAGTGAAAATATATCTTATTTTTGTCTTTCCCTACATGTATTAGCCTCTTGATCAAACATCGTAGTTAAAGATATTTTGTAAATTGGACAATAAATCAGTAAATATGTTTAGTGAGATTGCGAGTGATGAACAATAAGATATTATGTTTTAACTGCGTTTTCTTAATTGTAGATTGATTGG

mRNA sequence

GTTGAGGGTGTCTTTCAATGTGGGAGTGAGATTTGGCGCCTCAGTTGCTAAAGCAATATCCTTGTTGTGTTTGTTGAAAGCCTACAAAATAACGTGGTTCAATATACTCTTCTCATAAATTACGTAATCTCAGAACCATTTTTTCTTTGCTTTTCAATTCCCACCTAAAAAAGGGAAAAGGGGTTGAAATTTTCCCTATTCCTTTTTCTTATTTCACCTCTATTTCTACTGCTTCAACAGTAGAATCTTCAATCCTTCAAATCTGAGTCTCCCCAGGGTGTGAGAAATTTGGGCAAAGGGATGAATAGATGATGCTGAGAAATGTTAGTCAAAGACTTTTGTTGTTGTATTGATTCAAGTTTGTGGAGTTTGAAATTTGAATGAACCTTCCGATATGTCGGGTTGCCATTCGAATGATGTAAAGGTTAACACCGGCGCCAATCAGAACAATGACGGCGACCTTGAGAAGCAGAGGGTTGCTCAGCCATCATCATCAGCATCTACCAGAGATGCTGATGATAATACACAATTGACAATTGTTGTTTCTACAGGGGAGTCTAAACCAATCTCTGAGGTTCCTGGTCCTGGGACTCTTTGCTCTCAAGAGGGGTTATTGCCTTGTTCAGTTTCCTCAAAAAAGGAGCTCTTGTCCACCACTTCTAGTTCTGATGAGCAGTGCAGAATTTGTCAGCAAGAGAAGGAGGAAGTCTTAATAGAACTTGGATGTCATTGTCGAGGCGGTCTCGCAAAAGCTCATCGGACTTGCATAGATACTTGGTTTCATACTAAAGGATCAAACAGATGTGAGATATGCCAGGTTGTAGCGGCAAATGTATCACCTCCACAATCACATCATGGTGTAGCACAGACCAACTACTGGATTTGGAGGATTGATCCAACCTACAGAACTCAAGATCCCCAAAGGGTACAGCACTGCTTCAGTCCACTTTGGCTGGCTTTTGCCATCCTCATAGGAGGTCTGCTACTGGATATTCTTATATCCATAACCCTTGGTGTTTCCGCATTGCCTGTAAATATCATCATTGGAGTTATTGTGGTGCTTGGACTTGGAACTGTGTTTCGACTTGCCTTGGAGTTCTTTCAAGAATGGAATTCAACAAGAGGATCGCAAAGGGTGGAATCAAATGTCACTATTGGGTATTTTCCAGCTATATAGTCTTTGACTGTCTGTTTAAAAAAGGGAACAAAAAAAAAAAAAAAAAAAGAAAAAGAAAAAGAAAAGATATATAAATAAAGTGAAAATATATCTTATTTTTGTCTTTCCCTACATGTATTAGCCTCTTGATCAAACATCGTAGTTAAAGATATTTTGTAAATTGGACAATAAATCAGTAAATATGTTTAGTGAGATTGCGAGTGATGAACAATAAGATATTATGTTTTAACTGCGTTTTCTTAATTGTAGATTGATTGG

Coding sequence (CDS)

ATGTCGGGTTGCCATTCGAATGATGTAAAGGTTAACACCGGCGCCAATCAGAACAATGACGGCGACCTTGAGAAGCAGAGGGTTGCTCAGCCATCATCATCAGCATCTACCAGAGATGCTGATGATAATACACAATTGACAATTGTTGTTTCTACAGGGGAGTCTAAACCAATCTCTGAGGTTCCTGGTCCTGGGACTCTTTGCTCTCAAGAGGGGTTATTGCCTTGTTCAGTTTCCTCAAAAAAGGAGCTCTTGTCCACCACTTCTAGTTCTGATGAGCAGTGCAGAATTTGTCAGCAAGAGAAGGAGGAAGTCTTAATAGAACTTGGATGTCATTGTCGAGGCGGTCTCGCAAAAGCTCATCGGACTTGCATAGATACTTGGTTTCATACTAAAGGATCAAACAGATGTGAGATATGCCAGGTTGTAGCGGCAAATGTATCACCTCCACAATCACATCATGGTGTAGCACAGACCAACTACTGGATTTGGAGGATTGATCCAACCTACAGAACTCAAGATCCCCAAAGGGTACAGCACTGCTTCAGTCCACTTTGGCTGGCTTTTGCCATCCTCATAGGAGGTCTGCTACTGGATATTCTTATATCCATAACCCTTGGTGTTTCCGCATTGCCTGTAAATATCATCATTGGAGTTATTGTGGTGCTTGGACTTGGAACTGTGTTTCGACTTGCCTTGGAGTTCTTTCAAGAATGGAATTCAACAAGAGGATCGCAAAGGGTGGAATCAAATGTCACTATTGGGTATTTTCCAGCTATATAG

Protein sequence

MSGCHSNDVKVNTGANQNNDGDLEKQRVAQPSSSASTRDADDNTQLTIVVSTGESKPISEVPGPGTLCSQEGLLPCSVSSKKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRTCIDTWFHTKGSNRCEICQVVAANVSPPQSHHGVAQTNYWIWRIDPTYRTQDPQRVQHCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNSTRGSQRVESNVTIGYFPAI

Homology

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BLAST of Cla97C01G001340 vs. NCBI nr
Match: XP_038875308.1 (E3 ubiquitin-protein ligase MARCHF2 isoform X3 [Benincasa hispida])

HSP 1 Score: 478.0 bits (1229), Expect = 5.1e-131
Identity = 247/263 (93.92%), Postives = 248/263 (94.30%), Query Frame = 0


Query: 1   MSGCHSNDVKVNTGANQNNDGDLEKQRVAQPSSSA---STRDADDNTQLTIVVSTGESKP 60
           MS CHSNDVK NTGANQNNDGDLEKQRVAQPSSSA   STRD DDNT LTIVVSTGESKP
Sbjct: 1   MSDCHSNDVKANTGANQNNDGDLEKQRVAQPSSSALELSTRDGDDNTLLTIVVSTGESKP 60

Query: 61  ISEVPGPGTLCSQEGLLPCSVSSKKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGL 120
           ISEVPG GTLCSQEGLLPC VS KKELLSTTSSSDEQCRICQQEKEEVLIELGC+CRGGL
Sbjct: 61  ISEVPGVGTLCSQEGLLPCEVSPKKELLSTTSSSDEQCRICQQEKEEVLIELGCNCRGGL 120

Query: 121 AKAHRTCIDTWFHTKGSNRCEICQVVAANVSPPQSHHGVAQTNYWIWRIDPTYRTQDPQR 180
           AKAHRTCIDTWF TKGSNRCEICQVVAANVSPPQSHHG   TNYWIWRIDPTYRTQDPQR
Sbjct: 121 AKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHG---TNYWIWRIDPTYRTQDPQR 180

Query: 181 VQHCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQ 240
            QHCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQ
Sbjct: 181 -QHCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQ 240

Query: 241 EWNSTRGSQRVESNVTIGYFPAI 261
           EWNSTRGSQRVESNVTIGYFPAI
Sbjct: 241 EWNSTRGSQRVESNVTIGYFPAI 259

[Close]

BLAST of Cla97C01G001340 vs. NCBI nr
Match: XP_038875309.1 (E3 ubiquitin-protein ligase MARCHF2 isoform X4 [Benincasa hispida])

HSP 1 Score: 475.7 bits (1223), Expect = 2.5e-130
Identity = 246/263 (93.54%), Postives = 247/263 (93.92%), Query Frame = 0


Query: 1   MSGCHSNDVKVNTGANQNNDGDLEKQRVAQPSSSA---STRDADDNTQLTIVVSTGESKP 60
           MS CHSNDVK NTGANQNNDGDLEKQRVAQPSSSA   STRD DDNT LTIVVSTGESKP
Sbjct: 1   MSDCHSNDVKANTGANQNNDGDLEKQRVAQPSSSALELSTRDGDDNTLLTIVVSTGESKP 60

Query: 61  ISEVPGPGTLCSQEGLLPCSVSSKKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGL 120
           ISEVPG GTLCSQEGLLPC VS KKELLSTTSSSDEQCRICQQEKEEVLIELGC+CRGGL
Sbjct: 61  ISEVPGVGTLCSQEGLLPCEVSPKKELLSTTSSSDEQCRICQQEKEEVLIELGCNCRGGL 120

Query: 121 AKAHRTCIDTWFHTKGSNRCEICQVVAANVSPPQSHHGVAQTNYWIWRIDPTYRTQDPQR 180
           AKAHRTCIDTWF TKGSNRCEICQVVAANVSPPQSHHG   TNYWIWRIDPTYRTQDPQR
Sbjct: 121 AKAHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHG---TNYWIWRIDPTYRTQDPQR 180

Query: 181 VQHCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQ 240
             HCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQ
Sbjct: 181 --HCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQ 240

Query: 241 EWNSTRGSQRVESNVTIGYFPAI 261
           EWNSTRGSQRVESNVTIGYFPAI
Sbjct: 241 EWNSTRGSQRVESNVTIGYFPAI 258

[Close]

BLAST of Cla97C01G001340 vs. NCBI nr
Match: KAA0042631.1 (E3 ubiquitin-protein ligase MARCH2 isoform X1 [Cucumis melo var. makuwa] >TYK06032.1 E3 ubiquitin-protein ligase MARCH2 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 448.0 bits (1151), Expect = 5.7e-122
Identity = 233/260 (89.62%), Postives = 237/260 (91.15%), Query Frame = 0


Query: 4   CHSNDVKVNTGANQNNDGDLEKQRVAQPSSS--ASTRDADDNTQLTIVVSTGESKPISEV 63
           CHSNDVK N G NQ+N+GDLEKQRVAQPSSS   STRD DDNT LTIVVSTGESKP SEV
Sbjct: 7   CHSNDVKANAGRNQSNEGDLEKQRVAQPSSSLELSTRDGDDNTPLTIVVSTGESKPTSEV 66

Query: 64  PGPGTLCSQ-EGLLPCSVSSKKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKA 123
           PGPGTLCSQ EG L C+VS KKE  ST SSSDEQCRICQQEKEEVLIELGCHCRGGLAKA
Sbjct: 67  PGPGTLCSQEEGSLACAVSPKKEFSSTASSSDEQCRICQQEKEEVLIELGCHCRGGLAKA 126

Query: 124 HRTCIDTWFHTKGSNRCEICQVVAANVSPPQSHHGVAQTNYWIWRIDPTYRTQDPQRVQH 183
           HRTCIDTWF T GSNRCEICQVVAANVSPPQSHHG   TNYWIWRIDPTYRTQDPQR Q+
Sbjct: 127 HRTCIDTWFRTIGSNRCEICQVVAANVSPPQSHHG---TNYWIWRIDPTYRTQDPQR-QY 186

Query: 184 CFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWN 243
           CFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWN
Sbjct: 187 CFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWN 246

Query: 244 STRGSQRVESNVTIGYFPAI 261
           S RGSQRVESNVTIGYFPAI
Sbjct: 247 SARGSQRVESNVTIGYFPAI 262

[Close]

BLAST of Cla97C01G001340 vs. NCBI nr
Match: XP_008437466.1 (PREDICTED: E3 ubiquitin-protein ligase MARCH2 isoform X1 [Cucumis melo] >XP_016903259.1 PREDICTED: E3 ubiquitin-protein ligase MARCH2 isoform X1 [Cucumis melo])

HSP 1 Score: 447.6 bits (1150), Expect = 7.4e-122
Identity = 233/260 (89.62%), Postives = 237/260 (91.15%), Query Frame = 0


Query: 4   CHSNDVKVNTGANQNNDGDLEKQRVAQPSSS--ASTRDADDNTQLTIVVSTGESKPISEV 63
           CHSNDVK N G NQ+N+GDLEKQRVAQPSSS   STRD DDNT LTIVVSTGESKP SEV
Sbjct: 7   CHSNDVKANAGRNQSNEGDLEKQRVAQPSSSLELSTRDGDDNTPLTIVVSTGESKPTSEV 66

Query: 64  PGPGTLCSQ-EGLLPCSVSSKKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKA 123
           PGPGTLCSQ EG L C+VS KKE  ST SSSDEQCRICQQEKEEVLIELGCHCRGGLAKA
Sbjct: 67  PGPGTLCSQEEGSLACAVSPKKEFSSTASSSDEQCRICQQEKEEVLIELGCHCRGGLAKA 126

Query: 124 HRTCIDTWFHTKGSNRCEICQVVAANVSPPQSHHGVAQTNYWIWRIDPTYRTQDPQRVQH 183
           HRTCIDTWF TKGSNRCEICQVVAANVSPPQSHHG   TNYWIWRIDPTYRTQDPQR Q+
Sbjct: 127 HRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHG---TNYWIWRIDPTYRTQDPQR-QY 186

Query: 184 CFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWN 243
           CFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWN
Sbjct: 187 CFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWN 246

Query: 244 STRGSQRVESNVTIGYFPAI 261
           S R SQRVESNVTIGYFPAI
Sbjct: 247 SARVSQRVESNVTIGYFPAI 262

[Close]

BLAST of Cla97C01G001340 vs. NCBI nr
Match: XP_004145881.1 (E3 ubiquitin-protein ligase MARCH2 [Cucumis sativus] >XP_031742128.1 E3 ubiquitin-protein ligase MARCH2 [Cucumis sativus] >KGN49961.1 hypothetical protein Csa_000267 [Cucumis sativus])

HSP 1 Score: 446.4 bits (1147), Expect = 1.6e-121
Identity = 233/261 (89.27%), Postives = 239/261 (91.57%), Query Frame = 0


Query: 4   CHSNDVKVNTGANQNNDGDLEKQRVAQPSSSA---STRDADDNTQLTIVVSTGESKPISE 63
           CHSNDVK   G NQ+N+GDLEKQRVAQPSSSA   STRD DDNT LTIVVSTGESKP SE
Sbjct: 7   CHSNDVKAKAGGNQSNEGDLEKQRVAQPSSSALELSTRDGDDNTLLTIVVSTGESKPTSE 66

Query: 64  VPGPGTLCSQEG-LLPCSVSSKKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAK 123
           VPGPGTL SQE  +L C+VS KKELLSTTS SDEQCRICQQEKEEVLIELGCHCRGGLAK
Sbjct: 67  VPGPGTLRSQEEVILACAVSPKKELLSTTSGSDEQCRICQQEKEEVLIELGCHCRGGLAK 126

Query: 124 AHRTCIDTWFHTKGSNRCEICQVVAANVSPPQSHHGVAQTNYWIWRIDPTYRTQDPQRVQ 183
           AHRTCIDTWF TKGSNRCEICQVVAANVSPPQSHHG   TNYWIWRIDPTYRTQDPQR  
Sbjct: 127 AHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHG---TNYWIWRIDPTYRTQDPQR-- 186

Query: 184 HCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEW 243
           +CFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEW
Sbjct: 187 YCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEW 246

Query: 244 NSTRGSQRVESNVTIGYFPAI 261
           NS+RGSQRVESNVTIGYFPAI
Sbjct: 247 NSSRGSQRVESNVTIGYFPAI 262

[Close]

BLAST of Cla97C01G001340 vs. ExPASy Swiss-Prot
Match: Q5XH39 (E3 ubiquitin-protein ligase MARCHF8 OS=Xenopus laevis OX=8355 GN=marchf8 PE=2 SV=2)

HSP 1 Score: 48.1 bits (113), Expect = 1.7e-04
Identity = 26/70 (37.14%), Postives = 36/70 (51.43%), Query Frame = 0


Query: 75  PCSVS--SKKELLSTTSSSDEQCRICQQE-KEEVLIELGCHCRGGLAKAHRTCIDTWFHT 134
           P SVS  S+    S T SS + CRIC  E  +E  +   CHC G L   H+ C+  W  +
Sbjct: 31  PTSVSAPSRFPRTSVTPSSQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKS 90

Query: 135 KGSNRCEICQ 142
             +  CE+C+
Sbjct: 91  SDTRCCELCK 100

[Close]

BLAST of Cla97C01G001340 vs. ExPASy TrEMBL
Match: A0A5A7TM25 (E3 ubiquitin-protein ligase MARCH2 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001330 PE=4 SV=1)

HSP 1 Score: 448.0 bits (1151), Expect = 2.7e-122
Identity = 233/260 (89.62%), Postives = 237/260 (91.15%), Query Frame = 0


Query: 4   CHSNDVKVNTGANQNNDGDLEKQRVAQPSSS--ASTRDADDNTQLTIVVSTGESKPISEV 63
           CHSNDVK N G NQ+N+GDLEKQRVAQPSSS   STRD DDNT LTIVVSTGESKP SEV
Sbjct: 7   CHSNDVKANAGRNQSNEGDLEKQRVAQPSSSLELSTRDGDDNTPLTIVVSTGESKPTSEV 66

Query: 64  PGPGTLCSQ-EGLLPCSVSSKKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKA 123
           PGPGTLCSQ EG L C+VS KKE  ST SSSDEQCRICQQEKEEVLIELGCHCRGGLAKA
Sbjct: 67  PGPGTLCSQEEGSLACAVSPKKEFSSTASSSDEQCRICQQEKEEVLIELGCHCRGGLAKA 126

Query: 124 HRTCIDTWFHTKGSNRCEICQVVAANVSPPQSHHGVAQTNYWIWRIDPTYRTQDPQRVQH 183
           HRTCIDTWF T GSNRCEICQVVAANVSPPQSHHG   TNYWIWRIDPTYRTQDPQR Q+
Sbjct: 127 HRTCIDTWFRTIGSNRCEICQVVAANVSPPQSHHG---TNYWIWRIDPTYRTQDPQR-QY 186

Query: 184 CFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWN 243
           CFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWN
Sbjct: 187 CFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWN 246

Query: 244 STRGSQRVESNVTIGYFPAI 261
           S RGSQRVESNVTIGYFPAI
Sbjct: 247 SARGSQRVESNVTIGYFPAI 262

[Close]

BLAST of Cla97C01G001340 vs. ExPASy TrEMBL
Match: A0A1S3AU77 (E3 ubiquitin-protein ligase MARCH2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482880 PE=4 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 3.6e-122
Identity = 233/260 (89.62%), Postives = 237/260 (91.15%), Query Frame = 0


Query: 4   CHSNDVKVNTGANQNNDGDLEKQRVAQPSSS--ASTRDADDNTQLTIVVSTGESKPISEV 63
           CHSNDVK N G NQ+N+GDLEKQRVAQPSSS   STRD DDNT LTIVVSTGESKP SEV
Sbjct: 7   CHSNDVKANAGRNQSNEGDLEKQRVAQPSSSLELSTRDGDDNTPLTIVVSTGESKPTSEV 66

Query: 64  PGPGTLCSQ-EGLLPCSVSSKKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKA 123
           PGPGTLCSQ EG L C+VS KKE  ST SSSDEQCRICQQEKEEVLIELGCHCRGGLAKA
Sbjct: 67  PGPGTLCSQEEGSLACAVSPKKEFSSTASSSDEQCRICQQEKEEVLIELGCHCRGGLAKA 126

Query: 124 HRTCIDTWFHTKGSNRCEICQVVAANVSPPQSHHGVAQTNYWIWRIDPTYRTQDPQRVQH 183
           HRTCIDTWF TKGSNRCEICQVVAANVSPPQSHHG   TNYWIWRIDPTYRTQDPQR Q+
Sbjct: 127 HRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHG---TNYWIWRIDPTYRTQDPQR-QY 186

Query: 184 CFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWN 243
           CFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWN
Sbjct: 187 CFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWN 246

Query: 244 STRGSQRVESNVTIGYFPAI 261
           S R SQRVESNVTIGYFPAI
Sbjct: 247 SARVSQRVESNVTIGYFPAI 262

[Close]

BLAST of Cla97C01G001340 vs. ExPASy TrEMBL
Match: A0A0A0KQJ1 (RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G146840 PE=4 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 8.0e-122
Identity = 233/261 (89.27%), Postives = 239/261 (91.57%), Query Frame = 0


Query: 4   CHSNDVKVNTGANQNNDGDLEKQRVAQPSSSA---STRDADDNTQLTIVVSTGESKPISE 63
           CHSNDVK   G NQ+N+GDLEKQRVAQPSSSA   STRD DDNT LTIVVSTGESKP SE
Sbjct: 7   CHSNDVKAKAGGNQSNEGDLEKQRVAQPSSSALELSTRDGDDNTLLTIVVSTGESKPTSE 66

Query: 64  VPGPGTLCSQEG-LLPCSVSSKKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAK 123
           VPGPGTL SQE  +L C+VS KKELLSTTS SDEQCRICQQEKEEVLIELGCHCRGGLAK
Sbjct: 67  VPGPGTLRSQEEVILACAVSPKKELLSTTSGSDEQCRICQQEKEEVLIELGCHCRGGLAK 126

Query: 124 AHRTCIDTWFHTKGSNRCEICQVVAANVSPPQSHHGVAQTNYWIWRIDPTYRTQDPQRVQ 183
           AHRTCIDTWF TKGSNRCEICQVVAANVSPPQSHHG   TNYWIWRIDPTYRTQDPQR  
Sbjct: 127 AHRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHG---TNYWIWRIDPTYRTQDPQR-- 186

Query: 184 HCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEW 243
           +CFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEW
Sbjct: 187 YCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEW 246

Query: 244 NSTRGSQRVESNVTIGYFPAI 261
           NS+RGSQRVESNVTIGYFPAI
Sbjct: 247 NSSRGSQRVESNVTIGYFPAI 262

[Close]

BLAST of Cla97C01G001340 vs. ExPASy TrEMBL
Match: A0A1S3AU35 (E3 ubiquitin-protein ligase MARCH2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103482880 PE=4 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 1.8e-121
Identity = 232/260 (89.23%), Postives = 236/260 (90.77%), Query Frame = 0


Query: 4   CHSNDVKVNTGANQNNDGDLEKQRVAQPSSS--ASTRDADDNTQLTIVVSTGESKPISEV 63
           CHSNDVK N G NQ+N+GDLEKQRVAQPSSS   STRD DDNT LTIVVSTGESKP SEV
Sbjct: 7   CHSNDVKANAGRNQSNEGDLEKQRVAQPSSSLELSTRDGDDNTPLTIVVSTGESKPTSEV 66

Query: 64  PGPGTLCSQ-EGLLPCSVSSKKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKA 123
           PGPGTLCSQ EG L C+VS KKE  ST SSSDEQCRICQQEKEEVLIELGCHCRGGLAKA
Sbjct: 67  PGPGTLCSQEEGSLACAVSPKKEFSSTASSSDEQCRICQQEKEEVLIELGCHCRGGLAKA 126

Query: 124 HRTCIDTWFHTKGSNRCEICQVVAANVSPPQSHHGVAQTNYWIWRIDPTYRTQDPQRVQH 183
           HRTCIDTWF TKGSNRCEICQVVAANVSPPQSHHG   TNYWIWRIDPTYRTQDPQR  +
Sbjct: 127 HRTCIDTWFRTKGSNRCEICQVVAANVSPPQSHHG---TNYWIWRIDPTYRTQDPQR--Y 186

Query: 184 CFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWN 243
           CFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWN
Sbjct: 187 CFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWN 246

Query: 244 STRGSQRVESNVTIGYFPAI 261
           S R SQRVESNVTIGYFPAI
Sbjct: 247 SARVSQRVESNVTIGYFPAI 261

[Close]

BLAST of Cla97C01G001340 vs. ExPASy TrEMBL
Match: A0A6J1K2D4 (E3 ubiquitin-protein ligase MARCH2-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111491089 PE=4 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 2.0e-109
Identity = 213/261 (81.61%), Postives = 226/261 (86.59%), Query Frame = 0


Query: 1   MSGCHSNDVKVNTGANQNNDGDLEKQRVAQPSSS-ASTRDADDNTQLTIVVSTGESKPIS 60
           MS CH NDVK NT A +NN+ DLEKQRV  PS++  ST D DD+T LTIVVS GE K +S
Sbjct: 1   MSDCHLNDVKGNTSAEKNNEADLEKQRVELPSAADPSTSDVDDHTPLTIVVSNGELKSVS 60

Query: 61  EVPGPGTLCSQEGLLPCSVSSKKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAK 120
           EVP       +E LLPC+VS  KELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAK
Sbjct: 61  EVP-------REKLLPCAVSPMKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAK 120

Query: 121 AHRTCIDTWFHTKGSNRCEICQVVAANVSPPQSHHGVAQTNYWIWRIDPTYRTQDPQRVQ 180
           AHRTCIDTWF +KGSNRCEICQVVAANVSPPQSHH    TNYWIWRIDPTYRTQ+P+R Q
Sbjct: 121 AHRTCIDTWFRSKGSNRCEICQVVAANVSPPQSHHA---TNYWIWRIDPTYRTQEPER-Q 180

Query: 181 HCFSPLWLAFAILIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEW 240
             FSPLWLAFAILIGGLLLDIL+SITLG+SALPVNIIIGVIVVLGLGTV RLALEFFQEW
Sbjct: 181 RYFSPLWLAFAILIGGLLLDILVSITLGISALPVNIIIGVIVVLGLGTVLRLALEFFQEW 240

Query: 241 NSTRGSQRVESNVTIGYFPAI 261
           NSTRGSQRVESNVTIGYFPAI
Sbjct: 241 NSTRGSQRVESNVTIGYFPAI 250

[Close]

BLAST of Cla97C01G001340 vs. TAIR 10
Match: AT2G45530.1 (RING/U-box superfamily protein )

HSP 1 Score: 248.1 bits (632), Expect = 8.0e-66
Identity = 142/255 (55.69%), Postives = 173/255 (67.84%), Query Frame = 0


Query: 15  ANQNNDGDLEKQRVAQ---PSSSASTRDADDNTQLTIVVSTGESKPISEVPGPGTLCSQE 74
           ++ +   DLEKQ+  Q    S    +  A+++  LTIVV  G+S             S+E
Sbjct: 4   SSSSGGDDLEKQQQQQQKDKSPQKQSESANESNHLTIVVCNGDS-------------SRE 63

Query: 75  GLLPCSVSSKKELLSTTSSSDEQCRICQQEKEEVLIELGCHCRGGLAKAHRTCIDTWFHT 134
            L+      K+  LS   SS EQCR+C Q+KEEVLIELGC CRGGLAKAHR+CID WF T
Sbjct: 64  ELVGQIPPEKEVSLSRNGSSHEQCRVCLQDKEEVLIELGCQCRGGLAKAHRSCIDAWFRT 123

Query: 135 KGSNRCEICQVVAANVSPPQSHHGVAQTNYWIWRIDPTYRTQDPQRVQHCFSPLWLAFAI 194
           KGSN+CEICQVVA NV+PP++      TNYW+WRIDP+YR ++ +R   CFSPLW+AF+I
Sbjct: 124 KGSNQCEICQVVAVNVTPPETQ---PTTNYWVWRIDPSYRQEERER--GCFSPLWVAFSI 183

Query: 195 LIGGLLLDILISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWNST----RGSQR 254
           LIGGL+LD+LISITLGVSALPVNIIIGVIVVLGLGT  RL LEF  EW+      R  QR
Sbjct: 184 LIGGLMLDVLISITLGVSALPVNIIIGVIVVLGLGTALRLTLEFCYEWSLRRAVHRAVQR 240

Query: 255 VESN--VTIGYFPAI 261
            E+N    I Y PA+
Sbjct: 244 AEANNFSNIAYPPAL 240

[Close]

BLAST of Cla97C01G001340 vs. TAIR 10
Match: AT2G37950.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 66.2 bits (160), Expect = 4.3e-11
Identity = 32/63 (50.79%), Postives = 37/63 (58.73%), Query Frame = 0


Query: 88  TSSSDEQCRICQQEKEEV---LIELGCHCRGGLAKAHRTCIDTWFHTKGSNRCEICQVVA 147
           T+  ++ CRIC    E      IELGC C+  LA AHR C +TWF  KG   CEICQ VA
Sbjct: 77  TAPPEKDCRICHLGVETSGGGAIELGCSCKDDLAVAHRQCAETWFKIKGDKTCEICQSVA 136

[Close]

BLAST of Cla97C01G001340 vs. TAIR 10
Match: AT5G05830.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 61.6 bits (148), Expect = 1.1e-09
Identity = 42/122 (34.43%), Postives = 54/122 (44.26%), Query Frame = 0


Query: 32  SSSASTRDADDNTQLTIVVSTGESKPISEVPGPGTLCSQEGLLPCSVSSKKELLSTTSSS 91
           SSS    D +       V    E     E     ++CS E  L   +  K   L   S S
Sbjct: 19  SSSGCDGDGEPRRSSGAVEKEEEIVKDEERRSNASVCSVEIDLELGLPEKVVHL---SQS 78

Query: 92  DEQCRICQQE------KEEVLIELGCHCRGGLAKAHRTCIDTWFHTKGSNRCEICQVVAA 148
           +  CRIC         +  V IELGC C+  LA AH+ C +TWF  KG+  CE+C  +A 
Sbjct: 79  ERDCRICHMSLDAANLESGVPIELGCSCKADLAAAHKHCAETWFKIKGNKICEVCGSIAG 137

[Close]

BLAST of Cla97C01G001340 vs. TAIR 10
Match: AT5G59000.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 59.3 bits (142), Expect = 5.3e-09
Identity = 28/67 (41.79%), Postives = 41/67 (61.19%), Query Frame = 0


Query: 92  DEQCRICQQEKEE-----VLIELGCHCRGGLAKAHRTCIDTWFHTKGSNRCEICQVVAAN 151
           DE+    ++E+EE     + ++LGC C+G L  AH  C +TWF  KG+  CEIC  +A N
Sbjct: 110 DEEDEEEEEEEEEEEYYGLPLQLGCSCKGDLGVAHSKCAETWFKIKGNMTCEICGAMALN 169

Query: 152 VSPPQSH 154
           V+  QS+
Sbjct: 170 VAGEQSN 176

[Close]

BLAST of Cla97C01G001340 vs. TAIR 10
Match: AT5G03180.1 (RING/U-box superfamily protein )

HSP 1 Score: 53.5 bits (127), Expect = 2.9e-07
Identity = 22/55 (40.00%), Postives = 34/55 (61.82%), Query Frame = 0


Query: 95  CRIC--QQEKEEVLIELGCHCRGGLAKAHRTCIDTWFHTKGSNRCEICQVVAANV 148
           CRIC  + E++E   ++ C C+G LA AH+TC   WF  KG+  C++C+    N+
Sbjct: 247 CRICMVEMEEDEEAFKMECMCKGELALAHKTCTIKWFTIKGNITCDVCKQEVRNL 301

The following BLAST results are available for this feature:

BLAST of Cla97C01G001340 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875308.1	5.1e-131	93.92	E3 ubiquitin-protein ligase MARCHF2 isoform X3 [Benincasa hispida]	[more]
XP_038875309.1	2.5e-130	93.54	E3 ubiquitin-protein ligase MARCHF2 isoform X4 [Benincasa hispida]	[more]
KAA0042631.1	5.7e-122	89.62	E3 ubiquitin-protein ligase MARCH2 isoform X1 [Cucumis melo var. makuwa] >TYK060...	[more]
XP_008437466.1	7.4e-122	89.62	PREDICTED: E3 ubiquitin-protein ligase MARCH2 isoform X1 [Cucumis melo] >XP_0169...	[more]
XP_004145881.1	1.6e-121	89.27	E3 ubiquitin-protein ligase MARCH2 [Cucumis sativus] >XP_031742128.1 E3 ubiquiti...	[more]

BLAST of Cla97C01G001340 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5XH39	1.7e-04	37.14	E3 ubiquitin-protein ligase MARCHF8 OS=Xenopus laevis OX=8355 GN=marchf8 PE=2 SV...	[more]

BLAST of Cla97C01G001340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TM25	2.7e-122	89.62	E3 ubiquitin-protein ligase MARCH2 isoform X1 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A1S3AU77	3.6e-122	89.62	E3 ubiquitin-protein ligase MARCH2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A0A0KQJ1	8.0e-122	89.27	RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G14684...	[more]
A0A1S3AU35	1.8e-121	89.23	E3 ubiquitin-protein ligase MARCH2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A6J1K2D4	2.0e-109	81.61	E3 ubiquitin-protein ligase MARCH2-like isoform X1 OS=Cucurbita maxima OX=3661 G...	[more]

BLAST of Cla97C01G001340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G45530.1	8.0e-66	55.69	RING/U-box superfamily protein	[more]
AT2G37950.1	4.3e-11	50.79	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G05830.1	1.1e-09	34.43	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G59000.1	5.3e-09	41.79	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G03180.1	2.9e-07	40.00	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 94..141 e-value: 6.7E-14 score: 62.2
IPR011016	Zinc finger, RING-CH-type	PFAM	PF12906	RINGv	coord: 95..140 e-value: 1.7E-10 score: 40.8
IPR011016	Zinc finger, RING-CH-type	PROSITE	PS51292	ZF_RING_CH	coord: 87..147 score: 19.196674
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 78..149 e-value: 1.5E-14 score: 55.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..44
None	No IPR available	PANTHER	PTHR46214:SF16	E3 UBIQUITIN-PROTEIN LIGASE MARCH11 ISOFORM X1	coord: 24..259
None	No IPR available	PANTHER	PTHR46214	ZINC FINGER, RING-CH-TYPE	coord: 24..259
None	No IPR available	CDD	cd16495	RING_CH-C4HC3_MARCH	coord: 95..141 e-value: 8.19868E-13 score: 59.6484
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 90..143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C01G001340.2	Cla97C01G001340.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008270	zinc ion binding