Cla97C01G000940 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C01G000940
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	60S ribosomal protein L9-like
Location	Cla97Chr01: 669172 .. 670704 (+)
RNA-Seq Expression	Cla97C01G000940
Synteny	Cla97C01G000940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGACCATTCTCTCATCTGAAACCATGGATATCCCCGAGGGGGTGAAGATCAAAGTGAACGCGAAAATCATCGAGGTCGAAGGCCCTCGGGGGAAACTCGTTCGGAATTTCAAGCATCTGAATCTCGATTTCCAGCTGATCACCGACGAGGCTACCGGAAAGAAGAAGCTCAAGATTGATGCTTGGTTTGGCTCCAGGAAGACTTCTGCTGCCATTCGCACTGCCCTTAGCCATGTTGAAAATCTCATCACTGGTGTCACGAAGGGCTACCGTTACAAGATGCGATTTGTTTATGCTCACTTTCCAATTAATGCTAGCATCACGAACGCTAGCAAATCCATCGAGATCCGCAACTTTCTTGGCGAGAAGAAGGTATAATTCTTTTTCTGTCTCCCTCTTTTATCATTAATTACACTGTCTGGATGTTGTTTTCTGGATACTGGATTCATTTTTACTGCTGCATTTGCATTTTATACTAGTTGAATGTCGAATGTTCAAGGCAGCCCTAGCACTATGAAGTCCCGTTTTCTCTCCTCCTTTTGTGATTAGTTGAGTATTTAAGATTGAACTTGTTTATGTAATTCATGATTCTCCATCAGGGTTGTGGTTTAGCTTCGGTACTGAGAATGCTTTTAAATAAGTAGTCTTTACTAACTTATTATGTAAAATTATTCTTCAGTGAAATCTATAATAGGGACTTTTTTCAGTTGAAAATGTTGTAGACAGCAAAGAAGACAAATAAATAAGGTTCAATTTAGAGGAATGAAAAATCACGAAGTAGCTTGCAGCAAGACAGCAACTCAAATTATTAAATACTAGAAAAATTCACAAACCAATTGCTAGATTTATAGAACTGAACAAGTCAATAATCTTCAGCTAAAACATGAAATTACTCACTTGGCCTGGAAACGGAAATTGAAATCTAAACGCCATAAAATCAGGTACTACAACTTGCTATTGCATGGAAAATGCTAAATAATGAACAATTGAAAACTTTGTTTGGTAAAACAATTTTTGGGTACCTTGTCCTTTAATTTTTATATCAAAAGTCCAAGTACCTTATATTTGAACAAGCATGTAAACAGAACTAGTGTATGTTCAATTTTTTTTTTTAAATGGAAGACCCCATCTTTTATACAGTCCCTGTTTTTTCTTTTCAAAACTATTTTATGATGTGTGGATGCAATGTTTGCATTTCTTTGTGCAATAGGTGCGGAAAGTAGATATGCTTGATGGAGTATCTATTGTTCGATCTGAGAAGGTCAAGGATGAGTTAATCTTGGATGGTAACGATATTGAGCTTGTATCTCGCTCTGCTGCCTTGATTAACCAGGTATGTTTCTCTCCCATGCTACAATTTGGTTGGTTCTTGCTCGCGAAGCTTGTGGCTGCACATGGCATAGTTGGTTCATGCTCACTTTTTTCTTTTCTTCTGGTTGACAGAAATGCCATGTGAAGAACAAAGATATCCGGAAGTTCCTTGATGGTATTTATGTCAGCGAAAAGGGAACAGTCGTTGGAGAGGAGTGA

mRNA sequence

ATGAAGACCATTCTCTCATCTGAAACCATGGATATCCCCGAGGGGGTGAAGATCAAAGTGAACGCGAAAATCATCGAGGTCGAAGGCCCTCGGGGGAAACTCGTTCGGAATTTCAAGCATCTGAATCTCGATTTCCAGCTGATCACCGACGAGGCTACCGGAAAGAAGAAGCTCAAGATTGATGCTTGGTTTGGCTCCAGGAAGACTTCTGCTGCCATTCGCACTGCCCTTAGCCATGTTGAAAATCTCATCACTGGTGTCACGAAGGGCTACCGTTACAAGATGCGATTTGTTTATGCTCACTTTCCAATTAATGCTAGCATCACGAACGCTAGCAAATCCATCGAGATCCGCAACTTTCTTGGCGAGAAGAAGGTGCGGAAAGTAGATATGCTTGATGGAGTATCTATTGTTCGATCTGAGAAGGTCAAGGATGAGTTAATCTTGGATGGTAACGATATTGAGCTTGTATCTCGCTCTGCTGCCTTGATTAACCAGAAATGCCATGTGAAGAACAAAGATATCCGGAAGTTCCTTGATGGTATTTATGTCAGCGAAAAGGGAACAGTCGTTGGAGAGGAGTGA

Coding sequence (CDS)

ATGAAGACCATTCTCTCATCTGAAACCATGGATATCCCCGAGGGGGTGAAGATCAAAGTGAACGCGAAAATCATCGAGGTCGAAGGCCCTCGGGGGAAACTCGTTCGGAATTTCAAGCATCTGAATCTCGATTTCCAGCTGATCACCGACGAGGCTACCGGAAAGAAGAAGCTCAAGATTGATGCTTGGTTTGGCTCCAGGAAGACTTCTGCTGCCATTCGCACTGCCCTTAGCCATGTTGAAAATCTCATCACTGGTGTCACGAAGGGCTACCGTTACAAGATGCGATTTGTTTATGCTCACTTTCCAATTAATGCTAGCATCACGAACGCTAGCAAATCCATCGAGATCCGCAACTTTCTTGGCGAGAAGAAGGTGCGGAAAGTAGATATGCTTGATGGAGTATCTATTGTTCGATCTGAGAAGGTCAAGGATGAGTTAATCTTGGATGGTAACGATATTGAGCTTGTATCTCGCTCTGCTGCCTTGATTAACCAGAAATGCCATGTGAAGAACAAAGATATCCGGAAGTTCCTTGATGGTATTTATGTCAGCGAAAAGGGAACAGTCGTTGGAGAGGAGTGA

Protein sequence

MKTILSSETMDIPEGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKIDAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNASKSIEIRNFLGEKKVRKVDMLDGVSIVRSEKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKGTVVGEE

Homology

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BLAST of Cla97C01G000940 vs. NCBI nr
Match: XP_038876175.1 (60S ribosomal protein L9 [Benincasa hispida])

HSP 1 Score: 371.3 bits (952), Expect = 5.0e-99
Identity = 190/194 (97.94%), Postives = 193/194 (99.48%), Query Frame = 0


Query: 1   MKTILSSETMDIPEGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKI 60
           MKTILSSETMDIP+GVKIKV+AKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKI
Sbjct: 1   MKTILSSETMDIPDGVKIKVSAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKI 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNASKSIEIRNF 120
           DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNA+KSIEIRNF
Sbjct: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNANKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSIVRSEKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTVVGEE 195
           GIYVSEKGTVV EE
Sbjct: 181 GIYVSEKGTVVEEE 194

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BLAST of Cla97C01G000940 vs. NCBI nr
Match: XP_004145906.1 (60S ribosomal protein L9 [Cucumis sativus] >KGN49915.1 hypothetical protein Csa_000354 [Cucumis sativus])

HSP 1 Score: 370.9 bits (951), Expect = 6.6e-99
Identity = 188/194 (96.91%), Postives = 192/194 (98.97%), Query Frame = 0


Query: 1   MKTILSSETMDIPEGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKI 60
           MKTILSSETMDIP+GVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKI
Sbjct: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKI 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNASKSIEIRNF 120
           DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITN +KSIEIRNF
Sbjct: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNTNKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSI+RSEKVKDEL+LDGNDIELVSRSAALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSIIRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTVVGEE 195
           GIYVSEKGTVV EE
Sbjct: 181 GIYVSEKGTVVEEE 194

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BLAST of Cla97C01G000940 vs. NCBI nr
Match: XP_022922852.1 (60S ribosomal protein L9-like [Cucurbita moschata] >XP_022984942.1 60S ribosomal protein L9 [Cucurbita maxima] >XP_023553154.1 60S ribosomal protein L9 [Cucurbita pepo subsp. pepo] >KAG6576613.1 60S ribosomal protein L9, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 369.8 bits (948), Expect = 1.5e-98
Identity = 186/194 (95.88%), Postives = 192/194 (98.97%), Query Frame = 0


Query: 1   MKTILSSETMDIPEGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKI 60
           MKTILSSETMDIP+GVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKL+I
Sbjct: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNASKSIEIRNF 120
           +AWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITN+SKSIEIRNF
Sbjct: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSSKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSI RSEKVKDEL+LDGNDIELVSRS ALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTVVGEE 195
           GIYVSEKGT+VGEE
Sbjct: 181 GIYVSEKGTIVGEE 194

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BLAST of Cla97C01G000940 vs. NCBI nr
Match: XP_008437538.1 (PREDICTED: 60S ribosomal protein L9 [Cucumis melo] >ADN33776.1 60S ribosomal protein l9 [Cucumis melo subsp. melo] >KAA0042589.1 60S ribosomal protein L9 [Cucumis melo var. makuwa] >TYK05992.1 60S ribosomal protein L9 [Cucumis melo var. makuwa])

HSP 1 Score: 369.4 bits (947), Expect = 1.9e-98
Identity = 188/194 (96.91%), Postives = 192/194 (98.97%), Query Frame = 0


Query: 1   MKTILSSETMDIPEGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKI 60
           MKTILSSETMDIP+GVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDE TGKKKLKI
Sbjct: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEDTGKKKLKI 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNASKSIEIRNF 120
           DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITN++KSIEIRNF
Sbjct: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSNKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSIVRSEKVKDEL+LDGNDIELVSRSAALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTVVGEE 195
           GIYVSEKGTVV EE
Sbjct: 181 GIYVSEKGTVVEEE 194

[Close]

BLAST of Cla97C01G000940 vs. NCBI nr
Match: XP_023551562.1 (60S ribosomal protein L9-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 368.6 bits (945), Expect = 3.3e-98
Identity = 187/194 (96.39%), Postives = 191/194 (98.45%), Query Frame = 0


Query: 1   MKTILSSETMDIPEGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKI 60
           MKTILSSETMDIPEGVKIKVNAKIIEVEGPRGKL+RNFKHLNLDFQLIT+E TGKKKLKI
Sbjct: 1   MKTILSSETMDIPEGVKIKVNAKIIEVEGPRGKLIRNFKHLNLDFQLITEEETGKKKLKI 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNASKSIEIRNF 120
           DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITN +KSIEIRNF
Sbjct: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNTNKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSIVRSEKVKDEL+LDGNDIELVSRSAALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTVVGEE 195
           GIYVSEKGTVV EE
Sbjct: 181 GIYVSEKGTVVEEE 194

[Close]

BLAST of Cla97C01G000940 vs. ExPASy Swiss-Prot
Match: P30707 (60S ribosomal protein L9 OS=Pisum sativum OX=3888 GN=RPL9 PE=2 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 1.6e-92
Identity = 174/194 (89.69%), Postives = 184/194 (94.85%), Query Frame = 0


Query: 1   MKTILSSETMDIPEGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKI 60
           MKTILSSETM+IP+GV IKVNAK+IEVEGPRGKLVR+FKHLNLDF LITDE  GKKKLKI
Sbjct: 1   MKTILSSETMNIPDGVTIKVNAKVIEVEGPRGKLVRDFKHLNLDFDLITDE-NGKKKLKI 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNASKSIEIRNF 120
           DAWFGSRKTSAAIRTALSHVENLITGVTKG+RYKMRFVYA FPINASITN +KSIEIRNF
Sbjct: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGFRYKMRFVYADFPINASITNDNKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVD+LDGVSI+RSEKVKDE++LDGNDIELVSRS ALINQKCHVK KDIRKFLD
Sbjct: 121 LGEKKVRKVDLLDGVSIIRSEKVKDEVVLDGNDIELVSRSCALINQKCHVKKKDIRKFLD 180

Query: 181 GIYVSEKGTVVGEE 195
           GIYVSEKG VV EE
Sbjct: 181 GIYVSEKGAVVVEE 193

[Close]

BLAST of Cla97C01G000940 vs. ExPASy Swiss-Prot
Match: P49209 (60S ribosomal protein L9-1 OS=Arabidopsis thaliana OX=3702 GN=RPL9B PE=1 SV=3)

HSP 1 Score: 328.6 bits (841), Expect = 4.9e-89
Identity = 164/194 (84.54%), Postives = 180/194 (92.78%), Query Frame = 0


Query: 1   MKTILSSETMDIPEGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKI 60
           MKTILSSETMDIP+ V IKV+AK+IEVEGPRGKLVR+FKHLNLDFQLI D  TGKKKLKI
Sbjct: 1   MKTILSSETMDIPDSVTIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLIKDPETGKKKLKI 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNASKSIEIRNF 120
           D+WFG+RKTSA+IRTALSHV+NLI+GVT+G+RYKMRFVYAHFPINASI    KSIEIRNF
Sbjct: 61  DSWFGTRKTSASIRTALSHVDNLISGVTRGFRYKMRFVYAHFPINASIGGDGKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEKKVRKV+MLDGV+IVRSEKVKDE++LDGNDIELVSRS ALINQKCHVK KDIRKFLD
Sbjct: 121 LGEKKVRKVEMLDGVTIVRSEKVKDEIVLDGNDIELVSRSCALINQKCHVKKKDIRKFLD 180

Query: 181 GIYVSEKGTVVGEE 195
           GIYVSEK  +V EE
Sbjct: 181 GIYVSEKSKIVEEE 194

[Close]

BLAST of Cla97C01G000940 vs. ExPASy Swiss-Prot
Match: Q9SZX9 (60S ribosomal protein L9-2 OS=Arabidopsis thaliana OX=3702 GN=RPL9D PE=2 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 2.4e-88
Identity = 162/194 (83.51%), Postives = 179/194 (92.27%), Query Frame = 0


Query: 1   MKTILSSETMDIPEGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKI 60
           MKTILSSETMDIP+GV IKVNAK+IEVEGPRGKL R+FKHLNLDFQLI D+ TGK++LKI
Sbjct: 1   MKTILSSETMDIPDGVAIKVNAKVIEVEGPRGKLTRDFKHLNLDFQLIKDQVTGKRQLKI 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNASKSIEIRNF 120
           D+WFGSRKTSA+IRTALSHV+NLI GVT+G+ Y+MRFVYAHFPINASI   +KSIEIRNF
Sbjct: 61  DSWFGSRKTSASIRTALSHVDNLIAGVTQGFLYRMRFVYAHFPINASIDGNNKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEKKVRKV+MLDGV IVRSEKVKDE+IL+GNDIELVSRS ALINQKCHVK KDIRKFLD
Sbjct: 121 LGEKKVRKVEMLDGVKIVRSEKVKDEIILEGNDIELVSRSCALINQKCHVKKKDIRKFLD 180

Query: 181 GIYVSEKGTVVGEE 195
           GIYVSEKG +  EE
Sbjct: 181 GIYVSEKGKIAVEE 194

[Close]

BLAST of Cla97C01G000940 vs. ExPASy Swiss-Prot
Match: P49210 (60S ribosomal protein L9 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL9 PE=2 SV=3)

HSP 1 Score: 316.2 bits (809), Expect = 2.5e-85
Identity = 155/190 (81.58%), Postives = 178/190 (93.68%), Query Frame = 0


Query: 1   MKTILSSETMDIPEGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKI 60
           MKTIL+SETM+IPEGV ++V AK++ VEGPRGKL RNFKHLNLDFQL+     G +KL++
Sbjct: 1   MKTILASETMEIPEGVTVQVAAKVVTVEGPRGKLTRNFKHLNLDFQLL----EGGRKLQV 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNASKSIEIRNF 120
           DAWFG+R+T AAIRTA+SHV+NLITGVTKGYRYKMRFVYAHFPINASITN++ +IEIRNF
Sbjct: 61  DAWFGTRRTMAAIRTAISHVQNLITGVTKGYRYKMRFVYAHFPINASITNSNTAIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDML+GV+I+RSEKVKDEL+LDGNDIELVSRSAALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLEGVTILRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTV 191
           GIYVS+KGT+
Sbjct: 181 GIYVSDKGTI 186

[Close]

BLAST of Cla97C01G000940 vs. ExPASy Swiss-Prot
Match: Q90YW0 (60S ribosomal protein L9 OS=Ictalurus punctatus OX=7998 GN=rpl9 PE=2 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 5.8e-58
Identity = 114/194 (58.76%), Postives = 143/194 (73.71%), Query Frame = 0


Query: 1   MKTILSSETMDIPEGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKI 60
           MKTILS++T+DIP+ V + +  + + V+GPRG L R F H+NL+ +L+  +   +KKL++
Sbjct: 1   MKTILSTQTVDIPDNVDVTLKGRTVSVKGPRGVLRREFNHINLELRLLGKK---QKKLRV 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNASKSIEIRNF 120
           D W+G+RK  A +RT  SHV+N+I GVT G+RYKMR VYAHFPIN  I      +EIRNF
Sbjct: 61  DKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQETGSLVEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEK +R+V M  GV+   S   KDEL+L+GNDIELVS SAALI Q   VKNKDIRKFLD
Sbjct: 121 LGEKYIRRVRMRPGVNCALSAAQKDELVLEGNDIELVSNSAALIQQATTVKNKDIRKFLD 180

Query: 181 GIYVSEKGTVVGEE 195
           GIYVSEKGTVV  E
Sbjct: 181 GIYVSEKGTVVEPE 191

[Close]

BLAST of Cla97C01G000940 vs. ExPASy TrEMBL
Match: A0A0A0KJL8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139920 PE=3 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 3.2e-99
Identity = 188/194 (96.91%), Postives = 192/194 (98.97%), Query Frame = 0


Query: 1   MKTILSSETMDIPEGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKI 60
           MKTILSSETMDIP+GVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKI
Sbjct: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKI 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNASKSIEIRNF 120
           DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITN +KSIEIRNF
Sbjct: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNTNKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSI+RSEKVKDEL+LDGNDIELVSRSAALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSIIRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTVVGEE 195
           GIYVSEKGTVV EE
Sbjct: 181 GIYVSEKGTVVEEE 194

[Close]

BLAST of Cla97C01G000940 vs. ExPASy TrEMBL
Match: A0A6J1J3I2 (60S ribosomal protein L9 OS=Cucurbita maxima OX=3661 GN=LOC111483062 PE=3 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 7.1e-99
Identity = 186/194 (95.88%), Postives = 192/194 (98.97%), Query Frame = 0


Query: 1   MKTILSSETMDIPEGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKI 60
           MKTILSSETMDIP+GVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKL+I
Sbjct: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNASKSIEIRNF 120
           +AWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITN+SKSIEIRNF
Sbjct: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSSKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSI RSEKVKDEL+LDGNDIELVSRS ALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTVVGEE 195
           GIYVSEKGT+VGEE
Sbjct: 181 GIYVSEKGTIVGEE 194

[Close]

BLAST of Cla97C01G000940 vs. ExPASy TrEMBL
Match: A0A6J1E4H2 (60S ribosomal protein L9-like OS=Cucurbita moschata OX=3662 GN=LOC111430709 PE=3 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 7.1e-99
Identity = 186/194 (95.88%), Postives = 192/194 (98.97%), Query Frame = 0


Query: 1   MKTILSSETMDIPEGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKI 60
           MKTILSSETMDIP+GVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKL+I
Sbjct: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNASKSIEIRNF 120
           +AWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITN+SKSIEIRNF
Sbjct: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSSKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSI RSEKVKDEL+LDGNDIELVSRS ALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTVVGEE 195
           GIYVSEKGT+VGEE
Sbjct: 181 GIYVSEKGTIVGEE 194

[Close]

BLAST of Cla97C01G000940 vs. ExPASy TrEMBL
Match: A0A5D3C437 (60S ribosomal protein L9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00890 PE=3 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 9.3e-99
Identity = 188/194 (96.91%), Postives = 192/194 (98.97%), Query Frame = 0


Query: 1   MKTILSSETMDIPEGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKI 60
           MKTILSSETMDIP+GVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDE TGKKKLKI
Sbjct: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEDTGKKKLKI 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNASKSIEIRNF 120
           DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITN++KSIEIRNF
Sbjct: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSNKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSIVRSEKVKDEL+LDGNDIELVSRSAALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTVVGEE 195
           GIYVSEKGTVV EE
Sbjct: 181 GIYVSEKGTVVEEE 194

[Close]

BLAST of Cla97C01G000940 vs. ExPASy TrEMBL
Match: E5GBD5 (60S ribosomal protein l9 OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 9.3e-99
Identity = 188/194 (96.91%), Postives = 192/194 (98.97%), Query Frame = 0


Query: 1   MKTILSSETMDIPEGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKI 60
           MKTILSSETMDIP+GVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDE TGKKKLKI
Sbjct: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEDTGKKKLKI 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNASKSIEIRNF 120
           DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITN++KSIEIRNF
Sbjct: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSNKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSIVRSEKVKDEL+LDGNDIELVSRSAALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTVVGEE 195
           GIYVSEKGTVV EE
Sbjct: 181 GIYVSEKGTVVEEE 194

[Close]

BLAST of Cla97C01G000940 vs. TAIR 10
Match: AT1G33120.1 (Ribosomal protein L6 family )

HSP 1 Score: 328.6 bits (841), Expect = 3.5e-90
Identity = 164/194 (84.54%), Postives = 180/194 (92.78%), Query Frame = 0


Query: 1   MKTILSSETMDIPEGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKI 60
           MKTILSSETMDIP+ V IKV+AK+IEVEGPRGKLVR+FKHLNLDFQLI D  TGKKKLKI
Sbjct: 1   MKTILSSETMDIPDSVTIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLIKDPETGKKKLKI 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNASKSIEIRNF 120
           D+WFG+RKTSA+IRTALSHV+NLI+GVT+G+RYKMRFVYAHFPINASI    KSIEIRNF
Sbjct: 61  DSWFGTRKTSASIRTALSHVDNLISGVTRGFRYKMRFVYAHFPINASIGGDGKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEKKVRKV+MLDGV+IVRSEKVKDE++LDGNDIELVSRS ALINQKCHVK KDIRKFLD
Sbjct: 121 LGEKKVRKVEMLDGVTIVRSEKVKDEIVLDGNDIELVSRSCALINQKCHVKKKDIRKFLD 180

Query: 181 GIYVSEKGTVVGEE 195
           GIYVSEK  +V EE
Sbjct: 181 GIYVSEKSKIVEEE 194

[Close]

BLAST of Cla97C01G000940 vs. TAIR 10
Match: AT1G33140.1 (Ribosomal protein L6 family )

HSP 1 Score: 328.6 bits (841), Expect = 3.5e-90
Identity = 164/194 (84.54%), Postives = 180/194 (92.78%), Query Frame = 0


Query: 1   MKTILSSETMDIPEGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKI 60
           MKTILSSETMDIP+ V IKV+AK+IEVEGPRGKLVR+FKHLNLDFQLI D  TGKKKLKI
Sbjct: 1   MKTILSSETMDIPDSVTIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLIKDPETGKKKLKI 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNASKSIEIRNF 120
           D+WFG+RKTSA+IRTALSHV+NLI+GVT+G+RYKMRFVYAHFPINASI    KSIEIRNF
Sbjct: 61  DSWFGTRKTSASIRTALSHVDNLISGVTRGFRYKMRFVYAHFPINASIGGDGKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEKKVRKV+MLDGV+IVRSEKVKDE++LDGNDIELVSRS ALINQKCHVK KDIRKFLD
Sbjct: 121 LGEKKVRKVEMLDGVTIVRSEKVKDEIVLDGNDIELVSRSCALINQKCHVKKKDIRKFLD 180

Query: 181 GIYVSEKGTVVGEE 195
           GIYVSEK  +V EE
Sbjct: 181 GIYVSEKSKIVEEE 194

[Close]

BLAST of Cla97C01G000940 vs. TAIR 10
Match: AT4G10450.1 (Ribosomal protein L6 family )

HSP 1 Score: 326.2 bits (835), Expect = 1.7e-89
Identity = 162/194 (83.51%), Postives = 179/194 (92.27%), Query Frame = 0


Query: 1   MKTILSSETMDIPEGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKI 60
           MKTILSSETMDIP+GV IKVNAK+IEVEGPRGKL R+FKHLNLDFQLI D+ TGK++LKI
Sbjct: 1   MKTILSSETMDIPDGVAIKVNAKVIEVEGPRGKLTRDFKHLNLDFQLIKDQVTGKRQLKI 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNASKSIEIRNF 120
           D+WFGSRKTSA+IRTALSHV+NLI GVT+G+ Y+MRFVYAHFPINASI   +KSIEIRNF
Sbjct: 61  DSWFGSRKTSASIRTALSHVDNLIAGVTQGFLYRMRFVYAHFPINASIDGNNKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEKKVRKV+MLDGV IVRSEKVKDE+IL+GNDIELVSRS ALINQKCHVK KDIRKFLD
Sbjct: 121 LGEKKVRKVEMLDGVKIVRSEKVKDEIILEGNDIELVSRSCALINQKCHVKKKDIRKFLD 180

Query: 181 GIYVSEKGTVVGEE 195
           GIYVSEKG +  EE
Sbjct: 181 GIYVSEKGKIAVEE 194

The following BLAST results are available for this feature:

BLAST of Cla97C01G000940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876175.1	5.0e-99	97.94	60S ribosomal protein L9 [Benincasa hispida]	[more]
XP_004145906.1	6.6e-99	96.91	60S ribosomal protein L9 [Cucumis sativus] >KGN49915.1 hypothetical protein Csa_...	[more]
XP_022922852.1	1.5e-98	95.88	60S ribosomal protein L9-like [Cucurbita moschata] >XP_022984942.1 60S ribosomal...	[more]
XP_008437538.1	1.9e-98	96.91	PREDICTED: 60S ribosomal protein L9 [Cucumis melo] >ADN33776.1 60S ribosomal pro...	[more]
XP_023551562.1	3.3e-98	96.39	60S ribosomal protein L9-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cla97C01G000940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P30707	1.6e-92	89.69	60S ribosomal protein L9 OS=Pisum sativum OX=3888 GN=RPL9 PE=2 SV=1	[more]
P49209	4.9e-89	84.54	60S ribosomal protein L9-1 OS=Arabidopsis thaliana OX=3702 GN=RPL9B PE=1 SV=3	[more]
Q9SZX9	2.4e-88	83.51	60S ribosomal protein L9-2 OS=Arabidopsis thaliana OX=3702 GN=RPL9D PE=2 SV=1	[more]
P49210	2.5e-85	81.58	60S ribosomal protein L9 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL9 PE=2 S...	[more]
Q90YW0	5.8e-58	58.76	60S ribosomal protein L9 OS=Ictalurus punctatus OX=7998 GN=rpl9 PE=2 SV=1	[more]

BLAST of Cla97C01G000940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJL8	3.2e-99	96.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139920 PE=3 SV=1	[more]
A0A6J1J3I2	7.1e-99	95.88	60S ribosomal protein L9 OS=Cucurbita maxima OX=3661 GN=LOC111483062 PE=3 SV=1	[more]
A0A6J1E4H2	7.1e-99	95.88	60S ribosomal protein L9-like OS=Cucurbita moschata OX=3662 GN=LOC111430709 PE=3...	[more]
A0A5D3C437	9.3e-99	96.91	60S ribosomal protein L9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
E5GBD5	9.3e-99	96.91	60S ribosomal protein l9 OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1	[more]

BLAST of Cla97C01G000940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G33120.1	3.5e-90	84.54	Ribosomal protein L6 family	[more]
AT1G33140.1	3.5e-90	84.54	Ribosomal protein L6 family	[more]
AT4G10450.1	1.7e-89	83.51	Ribosomal protein L6 family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020040	Ribosomal protein L6, alpha-beta domain	PFAM	PF00347	Ribosomal_L6	coord: 12..90 e-value: 1.9E-11 score: 44.5 coord: 104..181 e-value: 5.0E-12 score: 46.3
IPR036789	Ribosomal protein L6, alpha-beta domain superfamily	GENE3D	3.90.930.12		coord: 1..90 e-value: 4.9E-30 score: 105.9
IPR036789	Ribosomal protein L6, alpha-beta domain superfamily	GENE3D	3.90.930.12		coord: 91..194 e-value: 6.2E-52 score: 176.0
IPR036789	Ribosomal protein L6, alpha-beta domain superfamily	SUPERFAMILY	56053	Ribosomal protein L6	coord: 91..187
IPR036789	Ribosomal protein L6, alpha-beta domain superfamily	SUPERFAMILY	56053	Ribosomal protein L6	coord: 1..90
IPR000702	Ribosomal protein L6	PIRSF	PIRSF002162	RPL6p_RPL6a_RPL9e_RPL9o	coord: 1..190 e-value: 1.1E-31 score: 107.7
IPR000702	Ribosomal protein L6	PANTHER	PTHR11655	60S/50S RIBOSOMAL PROTEIN L6/L9	coord: 1..194
None	No IPR available	PANTHER	PTHR11655:SF40	60S RIBOSOMAL PROTEIN L9-LIKE	coord: 1..194
IPR002359	Ribosomal protein L6, conserved site-2	PROSITE	PS00700	RIBOSOMAL_L6_2	coord: 166..187

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C01G000940.1	Cla97C01G000940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome