Cla97C01G000930 (gene) Watermelon (97103) v2.5

Overview
NameCla97C01G000930
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionTrafficking protein particle complex subunit
LocationCla97Chr01: 662472 .. 667244 (-)
RNA-Seq ExpressionCla97C01G000930
SyntenyCla97C01G000930
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCCCTACTACGTTGTATCAAAGCTATGTCCTTGTCTTAACCATGTCGGTGTTTCTCGATGAACAATCACAGTGATTCATGATTAAGCTTATCCAACAAGTGGTGGCTTCAGTGAAGAGGAGTTGACATGGTTAAAAGTGATATCCTCAAGAATATAGTTAGGAATAAGATTTGTTGGTTGAAATCATGAAACAAAATTATGAGAATTTTTGCTCAAAATGAATATTTCATACAAACGTGGAGAGTACAACTAAAACTTAACCTGAAATTTACATGTATAATTAACAAATATTATTTTCAAAATTTGTGCCGTTTGAATCACATAATTCGAAAATAGCTTTCAAAAATAGAATCTAGATTAGGAAAAGCATGTTGTAAATCTGAACATAAAACAAAATTATCAAAGCAGATGTCTATCTTACTTTGAAAAAATGTCTTATTTGTACCTAAATAAATTGGTCTTTATCAAAAGTGAGAGCCGAGTATCATCAGCAATACACACACAACATGATGACCAATTCCGTAATTTTACTTTGGGTTGAAAAAGAAGAAGAAGAAAAAAAAAACCAAATGAAATATCGAAACAGCGGTTTGGAGTTCGACTCCGAGCGCAGCGACTGATTAAAGAGAGAGCGATTTGCTTACAACACCTTTCACAAACGACGTTCATTCAATCTTTAATTGTCGGAAGCGTCTCCGGCGCCGTGAGGCTCCGATTTGCTGCCGTTGTCGCCGGCAATCATTGCCTGACGAATTAACTGCCTCATCGTTGGATCTGATCGCTTCTTTTTATCTGCCGTCTCTGCTCTCTGAGGTATCTTTCTCGTTTCCGTTGTTTGATTTTGATGGTCCTTCTTGAATCTGTCGCCGTCCAGCTCATTACGGATTATCTCTCCATTTTCCCCTGCTCTTAGCCCCTTCTATGATCCATAAGTAAGATCCACTCTATCTGCAATGTTCCTTTTACATTTCTTTTCCCCGGAACTCTGTATGAATAGAACTCCCTATTTTACACTAGATTTGTTTCTAACTATATACAGTGGTTCTGTGGAGTGGCCAAAGAGAAATGCAGCTGTGTTTTTTAGTCGAGTCATACAGATTCTTGCTTAACTGAATCCTGATTTGGGTCGGCTTAGATTTCACCCGTTGACGATTTGCTATTTTCTTTTTAACCTCAATGAATTATAATAGGAATGGCTGAATTCTTAGTTGCTTTGCTAGGCAGCTGATTGTAGAGTTGAGTGAAAATGTTGGGGTTTTGTTAGAATCTTAGATTCGTAACCCATTTTTGTATGAACAATTGATTTGATTCCATTTAGTTTATTCCAGAAACAATGCAGTTCTTTGGTGGGTCAGAGATTAGCCCTTCGCCTCCCGTACCGACAGCAACTGGAAACAATGTGCATATGATGTATATTTTCAATAGGAATGGAGTTTGCTTGTTCTACAGGGAGTGGAATCGGCCTCTCCGGACATTGAATCCCCAGCAAGACCACAAACTTATGTTTGGTTTGCTCTTCTCGCTTAAGTCCTTTACTGCCAAGATGGATCCAACCAGGTTTACGTTTCTTCCTTCCCTGAGAAACCACTTTGGCTTATGGTGTGCCTAGTTTAAGTAATGATCCAACAAGATAGGAGATTAATACAAACTATAGTTTTAAGCCTTAATAACTTGACAAATGCATTGCTCTTTTATGGTCGGTGGCAATAACTAATAAGATGTCTAATTTGATTGTAGATTTTGATTTTGACTTTTCAAAGTATTAACTTACTGGAAAGTGATGAGTTGCTTTTGGGAGTTAGATTTTGAAGTGATAGCTTTCTTTTTGCTTTTCTTTTATACAGTGCTGACAAAGGAAATCTTGGGGTTCCTCAGTTACCTGGCCAAGGTTGTTCGTTTCACAGCTTTCGTACTAATACCTACAAGCTCAGTTTTACTGAAACTCCATCAGGGATAAAGGTTTCTTTAACCTTCTTTCTTCTGTTATTGTCTATATTTGCCATTGTAGGTTCATGCATGTGTACTTGAATTGTTAAGTTAAATAACTTGATATATGAATTATTGAGATTTAATGAAATCAATATTTGTTTTGTGTCATTGACATGTTTATTTATTGTTATTATCAATGTTATTTGACGAGGTAGATGGGAGTATTGAAGGGTTCTTTCCTCTCTGTAACTTGTCACATAGATAACTTAAGTTTTAATTTGTAACCTCATGAAGAGTTCTTGCTTTTCTTTCTTGTTCTTAGAAAGTTCAGTTTCCTTGCTGATGATTAGTTCTTCCAATGAATCTTTTTCTTTTCTTTTTTTCTTTTGTTTTTCCTTCTTCTTTTCCTTCTTCTTGTTTTATTCTTGAAGAGTAGAAGTTGGACTTTTGGAAGAAGCCCTGTGAAGCTGCTGTTTTAAAATTGCAAAATGGGGATCCTTGCCACTAACTATAGGGTAAATTAGTTTGAAGTTCAATTTTGTGTGCATTGATGGATTATTTTCTTTGTTTTCAGATTATCCTGGTTACCCATCCTAGAACCGGTGATCTAAGGGACTCATTGAAATACATCTACAACTTGTATGTTGAATATGTAGTGAAAAATCCACTCTATAGTCCAGGAACACCAATCAGGTAAATTGTTTGGTTGATGCATATGTCCTGTATACCAACTGTAGTAATTTAACTCAGAAAAACTCAGTTTGAACCCTTGCAGAATAAAATCAATATTTTCGATGAATTTGAAGTTTGTTACACATGCACCCATTGGTTTCAATTTATAAAAGATCAAATGACGTCTGGATAAGGGAACTTATTATTGGTTCTGGACCTTAACTATACCTACTTTAAGTCTATGAGGCCTTTTCAGGGATCTTTTAGGCTTTACCAGATTCCACCTATAGACTAAATTACCACTTTTGTTCCTGGGTTGAGCTTGGTTTCAATTTTGTTCCTAGGATCTAACAAATTCTGTGTGATTACCGTATGTTAGTAGTTTTCTTACTTCACACACCTCCTTATTTATTTTTTTTTCTTTAATTTAATTTTTTTCCTTTTTTCATTTTTAACATGGAAAAGAGAGAACGAGTTCCCTTTAAGCATAAGGCATGGGTAAATGTTTGTTTGTTTGTTTTTTTGGATAAGAAACATTACATTGATGAATGAAATGAATTAGGGAAAAAAATAAAAGAAATTGGGTGGGTGTTCTTGGAACAAATTTGTGTAACGAAGGGTTTGATTTTGGGGTCTAGGGTTTTAGATTAATGATGAAAAGGTTGGCTTCAGAACTTGTTTTTCCTCTATTTCTGATATGACCCAACTAATCCATAATTCAATAAACAATTTATCCTTTAGATGTACCTTATAGTGAATGGTAGCACATCGTCCTTCTTTTTCACTTCCAAAGAAGAAGAATTGTGTAAGAAAACTATTAGCACCTAAGAATGGAATGTACATTTTTGGGAGATTTAACTAAGCTGTAGGAACTATAATGAAAATTTTAAAACCATTTAGTCCAACTTGAAACCAAACTCAAACTATATGGACTGAAATGTTAATTTAATCCTTCTTTTATCAGAAAGTATTAAGTGGGTGAATATCCGTTTAGTTCTCCTGTTTACTATTTTTAACTAAAGATTTGAAAGGTTTCAAAATCTTATTTATGGACTTAACCCTACCTCAAATAATTCATGCTTGCTATGATATTGTTCTTGTGATGAAAATAAAGTTAATTCTTGTTTGTCCTGGCAACACAATATCCACTCTCCCTTGATTTTGCTTTCTGCAGGTGTGAGCTATTCAATACAAGTCTTGACCAATATGTAAGAAGTATATTGTAGAAATCAGAGGTAGTGACTGCTCTGCCGTTTTAGTTTCATTCAATTTGTATGTTTGTCTGTCTTTTGTCGATGAATGAATGCGGTTCACTGGATGTGGTGCAGTTTCAGGCTGTTAAAATGCCTACCTGGGAGTTTCTTTTTGTTTTCTATTGGTTCCTGTAGAGAGTGCACCAGTATGAATTATTCTAGTTTATCCTTTTCCTTTCCCCCTTTTTTTCTCCCAGTATTTTGTGGTAACTTATCTGTGATAGTGGTGGAAGAAAAAGAAAGAAAAAAGACTCTAGTATAAATTTTGCTGCTCATGTATAATTTGTAGTAATGCATTCTATATTTCTTGTTTTATTTACACACGTACCATACATTAGGCTTTCTTTGTGTAAAAATGTGAAATGTTTCAAATGGGAGAGGATTATGTTCAATGACCTTCTTAACCTCTTCCGCCTTTCCAAGGTCTCTTCATCAATTTATATCTGAAAGAAGATTAGACAAACTGTAGGTTTCCTCTGCTTTGATTCCCGATGTCTAGCCAATTAAAATTCTTGCTTGCTTGGTTTGTGCGATTGTGCGCTCGGCATAATCGTGTTGCTGTTTCTTTCTTCCGCAGATGCTACCAAGCTCTTTCTCTAATCTCTCCTCGCTTCGAGCAAGGTCGGAGCCTTTATTATTTACCCTTGGCTCAGTCTATCCTTACTTCCCAAGGTCGAAGGACGAAAAATATCATTGAATCTGGTTGGAGGATCTCCATATGACTTCACAGGATAGAAAATCTTTCCATTGTATGAGTACTTGTGATCCATTTTCAGCAAGGTAGTTGGTGGGTTGAACCTGAAACCTTCACCTGTTTTAACTAGAAATCTGTCTCATGATACAGTTGTGGATTGTAGTGAGGGAAGCCAACTTAAGAGCAAAACCAAGTTCAAATTTGGGTTCTCTGTTCCCTGA

mRNA sequence

ATGGTCCCTACTACGTTGTATCAAAGCTATGTCCTTGTCTTAACCATGTCGGTGTTTCTCGATGAACAATCACAAGAGAGCGATTTGCTTACAACACCTTTCACAAACGACGTTCATTCAATCTTTAATTGTCGGAAGCGTCTCCGGCGCCGTGAGGCTCCGATTTGCTGCCGTTGTCGCCGGCAATCATTGCCTGACGAATTAACTGCCTCATCGTTGGATCTGATCGCTTCTTTTTATCTGCCGTCTCTGCTCTCTGAGAAACAATGCAGTTCTTTGGTGGGTCAGAGATTAGCCCTTCGCCTCCCGGAGTGGAATCGGCCTCTCCGGACATTGAATCCCCAGCAAGACCACAAACTTATGTTTGGTTTGCTCTTCTCGCTTAAGTCCTTTACTGCCAAGATGGATCCAACCAGTGCTGACAAAGGAAATCTTGGGGTTCCTCAGTTACCTGGCCAAGGTTGTTCGTTTCACAGCTTTCGTACTAATACCTACAAGCTCAGTTTTACTGAAACTCCATCAGGGATAAAGATTATCCTGGTTACCCATCCTAGAACCGGTGATCTAAGGGACTCATTGAAATACATCTACAACTTGTATGTTGAATATGTAGTGAAAAATCCACTCTATAGTCCAGGAACACCAATCAGGTGTGAGCTATTCAATACAAGTCTTGACCAATATTTTCAGGCTGTTAAAATGCCTACCTGGGAGTTTCTTTTTGTTTTCTATTGCAAGGTAGTTGGTGGGTTGAACCTGAAACCTTCACCTGTTTTAACTAGAAATCTGTCTCATGATACAGTTGTGGATTGTAGTGAGGGAAGCCAACTTAAGAGCAAAACCAAGTTCAAATTTGGGTTCTCTGTTCCCTGA

Coding sequence (CDS)

ATGGTCCCTACTACGTTGTATCAAAGCTATGTCCTTGTCTTAACCATGTCGGTGTTTCTCGATGAACAATCACAAGAGAGCGATTTGCTTACAACACCTTTCACAAACGACGTTCATTCAATCTTTAATTGTCGGAAGCGTCTCCGGCGCCGTGAGGCTCCGATTTGCTGCCGTTGTCGCCGGCAATCATTGCCTGACGAATTAACTGCCTCATCGTTGGATCTGATCGCTTCTTTTTATCTGCCGTCTCTGCTCTCTGAGAAACAATGCAGTTCTTTGGTGGGTCAGAGATTAGCCCTTCGCCTCCCGGAGTGGAATCGGCCTCTCCGGACATTGAATCCCCAGCAAGACCACAAACTTATGTTTGGTTTGCTCTTCTCGCTTAAGTCCTTTACTGCCAAGATGGATCCAACCAGTGCTGACAAAGGAAATCTTGGGGTTCCTCAGTTACCTGGCCAAGGTTGTTCGTTTCACAGCTTTCGTACTAATACCTACAAGCTCAGTTTTACTGAAACTCCATCAGGGATAAAGATTATCCTGGTTACCCATCCTAGAACCGGTGATCTAAGGGACTCATTGAAATACATCTACAACTTGTATGTTGAATATGTAGTGAAAAATCCACTCTATAGTCCAGGAACACCAATCAGGTGTGAGCTATTCAATACAAGTCTTGACCAATATTTTCAGGCTGTTAAAATGCCTACCTGGGAGTTTCTTTTTGTTTTCTATTGCAAGGTAGTTGGTGGGTTGAACCTGAAACCTTCACCTGTTTTAACTAGAAATCTGTCTCATGATACAGTTGTGGATTGTAGTGAGGGAAGCCAACTTAAGAGCAAAACCAAGTTCAAATTTGGGTTCTCTGTTCCCTGA

Protein sequence

MVPTTLYQSYVLVLTMSVFLDEQSQESDLLTTPFTNDVHSIFNCRKRLRRREAPICCRCRRQSLPDELTASSLDLIASFYLPSLLSEKQCSSLVGQRLALRLPEWNRPLRTLNPQQDHKLMFGLLFSLKSFTAKMDPTSADKGNLGVPQLPGQGCSFHSFRTNTYKLSFTETPSGIKIILVTHPRTGDLRDSLKYIYNLYVEYVVKNPLYSPGTPIRCELFNTSLDQYFQAVKMPTWEFLFVFYCKVVGGLNLKPSPVLTRNLSHDTVVDCSEGSQLKSKTKFKFGFSVP
Homology
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BLAST of Cla97C01G000930 vs. NCBI nr
Match: KAA0042588.1 (trafficking protein particle complex subunit 1 [Cucumis melo var. makuwa] >TYK05991.1 trafficking protein particle complex subunit 1 [Cucumis melo var. makuwa])

HSP 1 Score: 295.4 bits (755), Expect = 5.2e-76
Identity = 137/141 (97.16%), Postives = 138/141 (97.87%), Query Frame = 0 

Query: 104 EWNRPLRTLNPQQDHKLMFGLLFSLKSFTAKMDPTSADKGNLGVPQLPGQGCSFHSFRTN 163
           EWNRPLRTLNPQQDHKLMFGLLFSLKSFTAKMDPTS DKGNLGVPQLPGQGCSFHSFRTN
Sbjct: 40  EWNRPLRTLNPQQDHKLMFGLLFSLKSFTAKMDPTSVDKGNLGVPQLPGQGCSFHSFRTN 99

Query: 164 TYKLSFTETPSGIKIILVTHPRTGDLRDSLKYIYNLYVEYVVKNPLYSPGTPIRCELFNT 223
           TYKLSFTETPSGIKIILVTHPRTGDLRD LKYIYNLYVEYVVKNPLYSPGTPIRCELFNT
Sbjct: 100 TYKLSFTETPSGIKIILVTHPRTGDLRDPLKYIYNLYVEYVVKNPLYSPGTPIRCELFNT 159

Query: 224 SLDQYFQAVKMPTWEFLFVFY 245
           SLDQY QA+KMPTWEFLFVFY
Sbjct: 160 SLDQYLQAIKMPTWEFLFVFY 180

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BLAST of Cla97C01G000930 vs. NCBI nr
Match: KAG6605747.1 (Trafficking protein particle complex subunit 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 275.4 bits (703), Expect = 5.6e-70
Identity = 139/190 (73.16%), Postives = 151/190 (79.47%), Query Frame = 0 

Query: 45  RKRLRRREAPICCRCRRQSLPDELTASSLDLIASFYLPSLLSEKQCSSLVGQR--LALRL 104
           RK L RREAP+ CRCRR         S  ++  S  +P+          +  R  + L  
Sbjct: 24  RKSLWRREAPVFCRCRRLGTMQFFGGS--EISPSPPVPTATGNNVHMMYIFNRSGVCLFY 83

Query: 105 PEWNRPLRTLNPQQDHKLMFGLLFSLKSFTAKMDPTSADKGNLGVPQLPGQGCSFHSFRT 164
            EWNRPLRTLNPQQDHKLMFGLLFSLKSFTAKMDPTSADKGNLGVPQLPGQGCSFHSFRT
Sbjct: 84  REWNRPLRTLNPQQDHKLMFGLLFSLKSFTAKMDPTSADKGNLGVPQLPGQGCSFHSFRT 143

Query: 165 NTYKLSFTETPSGIKIILVTHPRTGDLRDSLKYIYNLYVEYVVKNPLYSPGTPIRCELFN 224
           NTYKLSFTETPSGIKIILVTHPRTGDLRDSLKYIYNLYVEY V+NPLYSPGT +RCELFN
Sbjct: 144 NTYKLSFTETPSGIKIILVTHPRTGDLRDSLKYIYNLYVEYAVRNPLYSPGTTLRCELFN 203

Query: 225 TSLDQYFQAV 233
           TSLDQY +++
Sbjct: 204 TSLDQYVRSI 211

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BLAST of Cla97C01G000930 vs. NCBI nr
Match: XP_038906999.1 (trafficking protein particle complex subunit 1 [Benincasa hispida] >XP_038907000.1 trafficking protein particle complex subunit 1 [Benincasa hispida])

HSP 1 Score: 268.1 bits (684), Expect = 9.0e-68
Identity = 124/129 (96.12%), Postives = 128/129 (99.22%), Query Frame = 0 

Query: 104 EWNRPLRTLNPQQDHKLMFGLLFSLKSFTAKMDPTSADKGNLGVPQLPGQGCSFHSFRTN 163
           EWNRPLRTLNPQQDHKLMFGLLFSLKSFTAKMDPTSADKGNLGVPQLPGQGCSFHSFRTN
Sbjct: 40  EWNRPLRTLNPQQDHKLMFGLLFSLKSFTAKMDPTSADKGNLGVPQLPGQGCSFHSFRTN 99

Query: 164 TYKLSFTETPSGIKIILVTHPRTGDLRDSLKYIYNLYVEYVVKNPLYSPGTPIRCELFNT 223
           TYKLSFTETPSGIKIILVTHPRTGDLRDSLKYIYNLYVEYVVKNP+YSPGTPIRCELFNT
Sbjct: 100 TYKLSFTETPSGIKIILVTHPRTGDLRDSLKYIYNLYVEYVVKNPIYSPGTPIRCELFNT 159

Query: 224 SLDQYFQAV 233
           SLDQY +++
Sbjct: 160 SLDQYVRSI 168

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BLAST of Cla97C01G000930 vs. NCBI nr
Match: XP_022922155.1 (trafficking protein particle complex subunit 1-like [Cucurbita moschata] >XP_022922156.1 trafficking protein particle complex subunit 1-like [Cucurbita moschata] >XP_022922157.1 trafficking protein particle complex subunit 1-like [Cucurbita moschata] >XP_022973065.1 trafficking protein particle complex subunit 1-like [Cucurbita maxima] >XP_022973067.1 trafficking protein particle complex subunit 1-like [Cucurbita maxima] >XP_022973068.1 trafficking protein particle complex subunit 1-like [Cucurbita maxima] >XP_023549605.1 trafficking protein particle complex subunit 1-like [Cucurbita pepo subsp. pepo] >XP_023549606.1 trafficking protein particle complex subunit 1-like [Cucurbita pepo subsp. pepo] >XP_023549607.1 trafficking protein particle complex subunit 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 266.5 bits (680), Expect = 2.6e-67
Identity = 124/129 (96.12%), Postives = 127/129 (98.45%), Query Frame = 0 

Query: 104 EWNRPLRTLNPQQDHKLMFGLLFSLKSFTAKMDPTSADKGNLGVPQLPGQGCSFHSFRTN 163
           EWNRPLRTLNPQQDHKLMFGLLFSLKSFTAKMDPTSADKGNLGVPQLPGQGCSFHSFRTN
Sbjct: 40  EWNRPLRTLNPQQDHKLMFGLLFSLKSFTAKMDPTSADKGNLGVPQLPGQGCSFHSFRTN 99

Query: 164 TYKLSFTETPSGIKIILVTHPRTGDLRDSLKYIYNLYVEYVVKNPLYSPGTPIRCELFNT 223
           TYKLSFTETPSGIKIILVTHPRTGDLRDSLKYIYNLYVEYVVKNPLYSPGTPIRCELF+T
Sbjct: 100 TYKLSFTETPSGIKIILVTHPRTGDLRDSLKYIYNLYVEYVVKNPLYSPGTPIRCELFST 159

Query: 224 SLDQYFQAV 233
           SLDQY + +
Sbjct: 160 SLDQYVRTI 168

[Close]
BLAST of Cla97C01G000930 vs. NCBI nr
Match: KAG6579361.1 (Trafficking protein particle complex subunit 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 265.8 bits (678), Expect = 4.4e-67
Identity = 128/148 (86.49%), Postives = 134/148 (90.54%), Query Frame = 0 

Query: 104 EWNRPLRTLNPQQDHKLMFGLLFSLKSFTAKMDPTSADKGNLGVPQLPGQGCSFHSFRTN 163
           EWNRPLRTLNPQQDHKLMFGLLFSLKSFTAKMDPTSADKGNLGVPQLPGQGCSFHSFRTN
Sbjct: 40  EWNRPLRTLNPQQDHKLMFGLLFSLKSFTAKMDPTSADKGNLGVPQLPGQGCSFHSFRTN 99

Query: 164 TYKLSFTETPSGIKIILVTHPRTGDLRDSLKYIYNLYVEYVVKNPLYSPGTPIRCELFNT 223
           TYKLSFTETPSGIKIILVTHPRTGDLRDSLKYIYNLYVEYVVKNPLYSPGTPIRCELF+T
Sbjct: 100 TYKLSFTETPSGIKIILVTHPRTGDLRDSLKYIYNLYVEYVVKNPLYSPGTPIRCELFST 159

Query: 224 SLDQY--FQAVKMP-------TWEFLFV 243
           SLDQY   + + +P        WE++ V
Sbjct: 160 SLDQYEDCRTITLPRTPMNPNCWEWILV 187

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BLAST of Cla97C01G000930 vs. ExPASy Swiss-Prot
Match: Q557G3 (Trafficking protein particle complex subunit 1 OS=Dictyostelium discoideum OX=44689 GN=trappc1-1 PE=3 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 5.3e-23
Identity = 53/135 (39.26%), Postives = 82/135 (60.74%), Query Frame = 0 

Query: 104 EWNRPLRTLNPQQDHKLMFGLLFSLKSFTAKMDPTSADKGNLGVPQLPGQGCSFHSFRTN 163
           +WN+  ++ N  +D KL+FG+L+SLK+F     P   D               FH ++T+
Sbjct: 19  DWNKKKQSQNQSEDQKLLFGMLYSLKAFITSSSPKKID-----------DKTGFHCYKTS 78

Query: 164 TYKLSFTETPSGIKIILVTHPRTGDLRDSLKYIYN-LYVEYVVKNPLYSPGTPIRCELFN 223
           TYKL + ET S IK I+++ P   DLRD LK IY+ ++VEYV+KNP+Y  GT ++C+ F 
Sbjct: 79  TYKLHYYETLSCIKFIIMSDPNVPDLRDDLKKIYSQIFVEYVIKNPIYKHGTTVKCDTFI 138

Query: 224 TSLDQYFQAVKMPTW 238
             L+ Y +  +MP++
Sbjct: 139 NQLNLYLK--QMPSF 140

[Close]
BLAST of Cla97C01G000930 vs. ExPASy Swiss-Prot
Match: Q5NCF2 (Trafficking protein particle complex subunit 1 OS=Mus musculus OX=10090 GN=Trappc1 PE=1 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.9e-21
Identity = 55/137 (40.15%), Postives = 84/137 (61.31%), Query Frame = 0 

Query: 98  LALRLPEWNRPLRTLNP-QQDHKLMFGLLFSLKSFTAKMDPTSADKGNLGVPQLPGQGCS 157
           + L   EW+R  +   P ++++KLM+G+LFS++SF +KM P     G             
Sbjct: 14  VCLHYSEWHRKKQAGIPKEEEYKLMYGMLFSIRSFVSKMSPLDMKDG------------- 73

Query: 158 FHSFRTNTYKLSFTETPSGIKIILVTHPRTGDLRDSLKYIYN-LYVEYVVKNPLYSPGTP 217
           F SF+T+ YKL + ETP+GIK+++ T    G +RD L +IY+ LYVE+VVKNPL   G  
Sbjct: 74  FLSFQTSRYKLHYYETPTGIKVVMNTDLGVGPIRDVLHHIYSALYVEFVVKNPLCPLGQT 133

Query: 218 IRCELFNTSLDQYFQAV 233
           ++ ELF + LD Y +++
Sbjct: 134 VQSELFRSRLDSYVRSL 137

[Close]
BLAST of Cla97C01G000930 vs. ExPASy Swiss-Prot
Match: Q2KMM2 (Trafficking protein particle complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Trappc1 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.9e-21
Identity = 55/137 (40.15%), Postives = 84/137 (61.31%), Query Frame = 0 

Query: 98  LALRLPEWNRPLRTLNP-QQDHKLMFGLLFSLKSFTAKMDPTSADKGNLGVPQLPGQGCS 157
           + L   EW+R  +   P ++++KLM+G+LFS++SF +KM P     G             
Sbjct: 14  VCLHYSEWHRKKQAGIPKEEEYKLMYGMLFSIRSFVSKMSPLDMKDG------------- 73

Query: 158 FHSFRTNTYKLSFTETPSGIKIILVTHPRTGDLRDSLKYIYN-LYVEYVVKNPLYSPGTP 217
           F SF+T+ YKL + ETP+GIK+++ T    G +RD L +IY+ LYVE+VVKNPL   G  
Sbjct: 74  FLSFQTSRYKLHYYETPTGIKVVMNTDLGVGPIRDVLHHIYSALYVEFVVKNPLCPLGQT 133

Query: 218 IRCELFNTSLDQYFQAV 233
           ++ ELF + LD Y +++
Sbjct: 134 VQSELFRSRLDSYVRSL 137

[Close]
BLAST of Cla97C01G000930 vs. ExPASy Swiss-Prot
Match: Q17QI1 (Trafficking protein particle complex subunit 1 OS=Bos taurus OX=9913 GN=TRAPPC1 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.9e-20
Identity = 54/137 (39.42%), Postives = 83/137 (60.58%), Query Frame = 0 

Query: 98  LALRLPEWNRPLRTLNP-QQDHKLMFGLLFSLKSFTAKMDPTSADKGNLGVPQLPGQGCS 157
           + L   EW+R  +   P ++++KLM+G+LFS++SF +KM P     G             
Sbjct: 14  VCLHYSEWHRKKQAGIPKEEEYKLMYGMLFSIRSFVSKMSPLDMKDG------------- 73

Query: 158 FHSFRTNTYKLSFTETPSGIKIILVTHPRTGDLRDSLKYIYN-LYVEYVVKNPLYSPGTP 217
           F +F+T+ YKL + ETP+GIK+++ T    G +RD L +IY+ LYVE VVKNPL   G  
Sbjct: 74  FLAFQTSRYKLHYYETPTGIKVVMNTDLGVGPIRDVLHHIYSALYVELVVKNPLCPLGQT 133

Query: 218 IRCELFNTSLDQYFQAV 233
           ++ ELF + LD Y +++
Sbjct: 134 VQSELFRSRLDSYVRSL 137

[Close]
BLAST of Cla97C01G000930 vs. ExPASy Swiss-Prot
Match: Q9Y5R8 (Trafficking protein particle complex subunit 1 OS=Homo sapiens OX=9606 GN=TRAPPC1 PE=1 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.9e-20
Identity = 54/137 (39.42%), Postives = 83/137 (60.58%), Query Frame = 0 

Query: 98  LALRLPEWNRPLRTLNP-QQDHKLMFGLLFSLKSFTAKMDPTSADKGNLGVPQLPGQGCS 157
           + L   EW+R  +   P ++++KLM+G+LFS++SF +KM P     G             
Sbjct: 14  VCLHYSEWHRKKQAGIPKEEEYKLMYGMLFSIRSFVSKMSPLDMKDG------------- 73

Query: 158 FHSFRTNTYKLSFTETPSGIKIILVTHPRTGDLRDSLKYIYN-LYVEYVVKNPLYSPGTP 217
           F +F+T+ YKL + ETP+GIK+++ T    G +RD L +IY+ LYVE VVKNPL   G  
Sbjct: 74  FLAFQTSRYKLHYYETPTGIKVVMNTDLGVGPIRDVLHHIYSALYVELVVKNPLCPLGQT 133

Query: 218 IRCELFNTSLDQYFQAV 233
           ++ ELF + LD Y +++
Sbjct: 134 VQSELFRSRLDSYVRSL 137

[Close]
BLAST of Cla97C01G000930 vs. ExPASy TrEMBL
Match: A0A5D3C227 (Trafficking protein particle complex subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00870 PE=3 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 2.5e-76
Identity = 137/141 (97.16%), Postives = 138/141 (97.87%), Query Frame = 0 

Query: 104 EWNRPLRTLNPQQDHKLMFGLLFSLKSFTAKMDPTSADKGNLGVPQLPGQGCSFHSFRTN 163
           EWNRPLRTLNPQQDHKLMFGLLFSLKSFTAKMDPTS DKGNLGVPQLPGQGCSFHSFRTN
Sbjct: 40  EWNRPLRTLNPQQDHKLMFGLLFSLKSFTAKMDPTSVDKGNLGVPQLPGQGCSFHSFRTN 99

Query: 164 TYKLSFTETPSGIKIILVTHPRTGDLRDSLKYIYNLYVEYVVKNPLYSPGTPIRCELFNT 223
           TYKLSFTETPSGIKIILVTHPRTGDLRD LKYIYNLYVEYVVKNPLYSPGTPIRCELFNT
Sbjct: 100 TYKLSFTETPSGIKIILVTHPRTGDLRDPLKYIYNLYVEYVVKNPLYSPGTPIRCELFNT 159

Query: 224 SLDQYFQAVKMPTWEFLFVFY 245
           SLDQY QA+KMPTWEFLFVFY
Sbjct: 160 SLDQYLQAIKMPTWEFLFVFY 180

[Close]
BLAST of Cla97C01G000930 vs. ExPASy TrEMBL
Match: A0A6J1IAE9 (Trafficking protein particle complex subunit OS=Cucurbita maxima OX=3661 GN=LOC111471566 PE=3 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 1.3e-67
Identity = 124/129 (96.12%), Postives = 127/129 (98.45%), Query Frame = 0 

Query: 104 EWNRPLRTLNPQQDHKLMFGLLFSLKSFTAKMDPTSADKGNLGVPQLPGQGCSFHSFRTN 163
           EWNRPLRTLNPQQDHKLMFGLLFSLKSFTAKMDPTSADKGNLGVPQLPGQGCSFHSFRTN
Sbjct: 40  EWNRPLRTLNPQQDHKLMFGLLFSLKSFTAKMDPTSADKGNLGVPQLPGQGCSFHSFRTN 99

Query: 164 TYKLSFTETPSGIKIILVTHPRTGDLRDSLKYIYNLYVEYVVKNPLYSPGTPIRCELFNT 223
           TYKLSFTETPSGIKIILVTHPRTGDLRDSLKYIYNLYVEYVVKNPLYSPGTPIRCELF+T
Sbjct: 100 TYKLSFTETPSGIKIILVTHPRTGDLRDSLKYIYNLYVEYVVKNPLYSPGTPIRCELFST 159

Query: 224 SLDQYFQAV 233
           SLDQY + +
Sbjct: 160 SLDQYVRTI 168

[Close]
BLAST of Cla97C01G000930 vs. ExPASy TrEMBL
Match: A0A6J1E2F4 (Trafficking protein particle complex subunit OS=Cucurbita moschata OX=3662 GN=LOC111430218 PE=3 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 1.3e-67
Identity = 124/129 (96.12%), Postives = 127/129 (98.45%), Query Frame = 0 

Query: 104 EWNRPLRTLNPQQDHKLMFGLLFSLKSFTAKMDPTSADKGNLGVPQLPGQGCSFHSFRTN 163
           EWNRPLRTLNPQQDHKLMFGLLFSLKSFTAKMDPTSADKGNLGVPQLPGQGCSFHSFRTN
Sbjct: 40  EWNRPLRTLNPQQDHKLMFGLLFSLKSFTAKMDPTSADKGNLGVPQLPGQGCSFHSFRTN 99

Query: 164 TYKLSFTETPSGIKIILVTHPRTGDLRDSLKYIYNLYVEYVVKNPLYSPGTPIRCELFNT 223
           TYKLSFTETPSGIKIILVTHPRTGDLRDSLKYIYNLYVEYVVKNPLYSPGTPIRCELF+T
Sbjct: 100 TYKLSFTETPSGIKIILVTHPRTGDLRDSLKYIYNLYVEYVVKNPLYSPGTPIRCELFST 159

Query: 224 SLDQYFQAV 233
           SLDQY + +
Sbjct: 160 SLDQYVRTI 168

[Close]
BLAST of Cla97C01G000930 vs. ExPASy TrEMBL
Match: A0A0A0KM26 (Trafficking protein particle complex subunit OS=Cucumis sativus OX=3659 GN=Csa_5G139910 PE=3 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 2.2e-67
Identity = 123/129 (95.35%), Postives = 126/129 (97.67%), Query Frame = 0 

Query: 104 EWNRPLRTLNPQQDHKLMFGLLFSLKSFTAKMDPTSADKGNLGVPQLPGQGCSFHSFRTN 163
           EWNRPLRTLNPQQDHKLMFGLLFSLKSFTAKMDPTSADKGNLGVPQLPGQGCSFHSFRTN
Sbjct: 40  EWNRPLRTLNPQQDHKLMFGLLFSLKSFTAKMDPTSADKGNLGVPQLPGQGCSFHSFRTN 99

Query: 164 TYKLSFTETPSGIKIILVTHPRTGDLRDSLKYIYNLYVEYVVKNPLYSPGTPIRCELFNT 223
           TYKLSFTETPSGIKIILVTHPRTGDLRD LKYIYNLYVEYVVKNP+YSPGTPIRCELFNT
Sbjct: 100 TYKLSFTETPSGIKIILVTHPRTGDLRDPLKYIYNLYVEYVVKNPIYSPGTPIRCELFNT 159

Query: 224 SLDQYFQAV 233
           SLDQY + +
Sbjct: 160 SLDQYVRTI 168

[Close]
BLAST of Cla97C01G000930 vs. ExPASy TrEMBL
Match: A0A1S3AUA1 (Trafficking protein particle complex subunit OS=Cucumis melo OX=3656 GN=LOC103482924 PE=3 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 2.8e-67
Identity = 123/129 (95.35%), Postives = 126/129 (97.67%), Query Frame = 0 

Query: 104 EWNRPLRTLNPQQDHKLMFGLLFSLKSFTAKMDPTSADKGNLGVPQLPGQGCSFHSFRTN 163
           EWNRPLRTLNPQQDHKLMFGLLFSLKSFTAKMDPTS DKGNLGVPQLPGQGCSFHSFRTN
Sbjct: 40  EWNRPLRTLNPQQDHKLMFGLLFSLKSFTAKMDPTSVDKGNLGVPQLPGQGCSFHSFRTN 99

Query: 164 TYKLSFTETPSGIKIILVTHPRTGDLRDSLKYIYNLYVEYVVKNPLYSPGTPIRCELFNT 223
           TYKLSFTETPSGIKIILVTHPRTGDLRD LKYIYNLYVEYVVKNPLYSPGTPIRCELFNT
Sbjct: 100 TYKLSFTETPSGIKIILVTHPRTGDLRDPLKYIYNLYVEYVVKNPLYSPGTPIRCELFNT 159

Query: 224 SLDQYFQAV 233
           SLDQY +++
Sbjct: 160 SLDQYVRSI 168

[Close]
BLAST of Cla97C01G000930 vs. TAIR 10
Match: AT1G51160.1 (SNARE-like superfamily protein )

HSP 1 Score: 246.5 bits (628), Expect = 2.6e-65
Identity = 113/135 (83.70%), Postives = 125/135 (92.59%), Query Frame = 0 

Query: 98  LALRLPEWNRPLRTLNPQQDHKLMFGLLFSLKSFTAKMDPTSADKGNLGVPQLPGQGCSF 157
           + L   EWNRPL TLNPQQDHKLMFGLLFSLKS TAKMDP +ADKGNLGVPQLPGQGCSF
Sbjct: 34  VCLLYKEWNRPLHTLNPQQDHKLMFGLLFSLKSLTAKMDPVNADKGNLGVPQLPGQGCSF 93

Query: 158 HSFRTNTYKLSFTETPSGIKIILVTHPRTGDLRDSLKYIYNLYVEYVVKNPLYSPGTPIR 217
           HSFRTNTYKLSF ETPSGIKIILVTHP+TGDLR+SLKYIY+LYVEYVVKNP+YSPG+PI+
Sbjct: 94  HSFRTNTYKLSFMETPSGIKIILVTHPKTGDLRESLKYIYSLYVEYVVKNPIYSPGSPIK 153

Query: 218 CELFNTSLDQYFQAV 233
            ELFNT+LDQY +++
Sbjct: 154 SELFNTALDQYVRSI 168

[Close]
BLAST of Cla97C01G000930 vs. TAIR 10
Match: AT1G51160.2 (SNARE-like superfamily protein )

HSP 1 Score: 246.5 bits (628), Expect = 2.6e-65
Identity = 113/135 (83.70%), Postives = 125/135 (92.59%), Query Frame = 0 

Query: 98  LALRLPEWNRPLRTLNPQQDHKLMFGLLFSLKSFTAKMDPTSADKGNLGVPQLPGQGCSF 157
           + L   EWNRPL TLNPQQDHKLMFGLLFSLKS TAKMDP +ADKGNLGVPQLPGQGCSF
Sbjct: 34  VCLLYKEWNRPLHTLNPQQDHKLMFGLLFSLKSLTAKMDPVNADKGNLGVPQLPGQGCSF 93

Query: 158 HSFRTNTYKLSFTETPSGIKIILVTHPRTGDLRDSLKYIYNLYVEYVVKNPLYSPGTPIR 217
           HSFRTNTYKLSF ETPSGIKIILVTHP+TGDLR+SLKYIY+LYVEYVVKNP+YSPG+PI+
Sbjct: 94  HSFRTNTYKLSFMETPSGIKIILVTHPKTGDLRESLKYIYSLYVEYVVKNPIYSPGSPIK 153

Query: 218 CELFNTSLDQYFQAV 233
            ELFNT+LDQY +++
Sbjct: 154 SELFNTALDQYVRSI 168

[Close]
BLAST of Cla97C01G000930 vs. TAIR 10
Match: AT5G02280.1 (SNARE-like superfamily protein )

HSP 1 Score: 67.0 bits (162), Expect = 2.8e-11
Identity = 33/82 (40.24%), Postives = 45/82 (54.88%), Query Frame = 0 

Query: 151 PGQGCS-FHSFRTNTYKLSFTETPSGIKIILVTHPRTGDLRDSLKYIYNLYVEYVVKNPL 210
           P  GCS       +T+ L   ++  G K  +V  P T  +   L+YIY LY +YV+KNP 
Sbjct: 52  PVNGCSGIELLEADTFDLHCFQSLPGTKFFVVCEPGTPHMESLLRYIYELYTDYVLKNPF 111

Query: 211 YSPGTPIRCELFNTSLDQYFQA 232
           Y    PIRCELF+ +L Q  Q+
Sbjct: 112 YEIEMPIRCELFDINLTQAVQS 133

The following BLAST results are available for this feature:
BLAST of Cla97C01G000930 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0042588.15.2e-7697.16trafficking protein particle complex subunit 1 [Cucumis melo var. makuwa] >TYK05... [more]
KAG6605747.15.6e-7073.16Trafficking protein particle complex subunit 1, partial [Cucurbita argyrosperma ... [more]
XP_038906999.19.0e-6896.12trafficking protein particle complex subunit 1 [Benincasa hispida] >XP_038907000... [more]
XP_022922155.12.6e-6796.12trafficking protein particle complex subunit 1-like [Cucurbita moschata] >XP_022... [more]
KAG6579361.14.4e-6786.49Trafficking protein particle complex subunit 1, partial [Cucurbita argyrosperma ... [more]
BLAST of Cla97C01G000930 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q557G35.3e-2339.26Trafficking protein particle complex subunit 1 OS=Dictyostelium discoideum OX=44... [more]
Q5NCF22.9e-2140.15Trafficking protein particle complex subunit 1 OS=Mus musculus OX=10090 GN=Trapp... [more]
Q2KMM22.9e-2140.15Trafficking protein particle complex subunit 1 OS=Rattus norvegicus OX=10116 GN=... [more]
Q17QI11.9e-2039.42Trafficking protein particle complex subunit 1 OS=Bos taurus OX=9913 GN=TRAPPC1 ... [more]
Q9Y5R81.9e-2039.42Trafficking protein particle complex subunit 1 OS=Homo sapiens OX=9606 GN=TRAPPC... [more]
BLAST of Cla97C01G000930 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3C2272.5e-7697.16Trafficking protein particle complex subunit OS=Cucumis melo var. makuwa OX=1194... [more]
A0A6J1IAE91.3e-6796.12Trafficking protein particle complex subunit OS=Cucurbita maxima OX=3661 GN=LOC1... [more]
A0A6J1E2F41.3e-6796.12Trafficking protein particle complex subunit OS=Cucurbita moschata OX=3662 GN=LO... [more]
A0A0A0KM262.2e-6795.35Trafficking protein particle complex subunit OS=Cucumis sativus OX=3659 GN=Csa_5... [more]
A0A1S3AUA12.8e-6795.35Trafficking protein particle complex subunit OS=Cucumis melo OX=3656 GN=LOC10348... [more]
BLAST of Cla97C01G000930 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G51160.12.6e-6583.70SNARE-like superfamily protein [more]
AT1G51160.22.6e-6583.70SNARE-like superfamily protein [more]
AT5G02280.12.8e-1140.24SNARE-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007233Trafficking protein particle complex subunitSMARTSM01399Sybindin_2coord: 104..232
e-value: 3.2E-46
score: 169.5
IPR007233Trafficking protein particle complex subunitPFAMPF04099Sybindincoord: 104..231
e-value: 2.6E-39
score: 134.4
IPR007233Trafficking protein particle complex subunitPANTHERPTHR23249TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNITcoord: 100..230
NoneNo IPR availableGENE3D3.30.450.70coord: 99..237
e-value: 5.8E-39
score: 135.4
NoneNo IPR availablePANTHERPTHR23249:SF18TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 1-LIKEcoord: 100..230
NoneNo IPR availableCDDcd14855TRAPPC1_MUM2coord: 104..228
e-value: 3.4632E-56
score: 175.813
IPR011012Longin-like domain superfamilySUPERFAMILY64356SNARE-likecoord: 110..230

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C01G000930.2Cla97C01G000930.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport
biological_process GO:0016192 vesicle-mediated transport
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0030008 TRAPP complex