Cla97C01G000840 (gene) Watermelon (97103) v2.5

Overview
NameCla97C01G000840
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionWD repeat-containing protein 91-like protein
LocationCla97Chr01: 568594 .. 571519 (-)
RNA-Seq ExpressionCla97C01G000840
SyntenyCla97C01G000840
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTTTGGAGAGCTGAAGAGCACATTTGATAAGCTCAACCTTATTGCTGAAAACCAACAGCAGAGAGTTCGTTACTATGAGACTAGAGCCCAAAACATTGCTCTTCCTTGCCTCATATGGGATCGCTTCTTCCTCCTTTGTATGTCTCAAATTTCTTTATTCTTTCCTCTACCTCTCTCTACTTTTTGTTTTTCCTTGAGGCTGTTATCATGTTGGACATGATTTCCAAGGAACACATTCGAATCTCCCAACAGATTTTGAATGCTCCAACCCCATATGACGATGCGGCTGGAGATTCAATTTTAATTGATGGGTTGGAGTTGAGTTTCCAGGTGCACTTACTTGAGTACCATCCATTTAGAATTGTCCAGAGGAAAGTTTATATTGCTTCCACTCTCTGTGCTCTGCTTGCTGTTGCTGCTTTTGAACTATACGCCTGTAAGCACTTGTTATGCAATTCAAGCTGAACATTAATTGATCTGGTGACCTACTGCTAAGGATCTTGGGTTGGTTTTCTGCTTTCTATGGTTGAAAAAGTATAGATGCACATTATAAAGGGTCTTACTCTTAGATTTGTTGTCTGCTTTGTTGATTGAAAGAATATATCTAGTTTCTACACATATATGCACTGAGCTTTCCTAGCTTTCCTAGCTTTCCCTTTTCCTCCTCTGGATCTAAACTACTTATGAATAGAGTCCATTTCACGATTGCTCTTTCAATTTTACTTGAACCAAAAACAACGTTAATTACACCAATAAAATTGCGCTTCTATTATCTTCTCAATACTCCTTTACTTATGGGCTTGGAAATCAACACTAGTGTATGACCACGAATTTTCTACTTAAAAGCCCTCTAATGATCTCCAAAAGCTCTCCAATGTGAACGTTGTGTGCTTAAAGAACAACTTGTGAAGAGTATTGAATTTGAGGTTGTGTATTATGCAAGATTGCAAACAAAATCAATAATAAATCTTATTTGTGAATATCCCTGGGTTTCTTTCCTTTTGGAGAATCTAAATGAGAGCTGTAGAGGCACTTGACAGAAGGATTCTAACTTTATCCTTGAACCACCTGCCTAAAAGGATCTCAGGAAGCCAACCTTCTTCATTACTTGAACAATAGCAAAATATTAACCAGTGGTTTATTGATTGAGATGGGTTCAATTGTGTTTGTGGAACTTTTTCGAATTTCTAGTAAACTACATAATCTCTTCCAGATAGATACCTGGTCTAATTCAGAACACACTCTTTTGTTGGCGTTACTTCAAGTACGATCTGGATTTTCAATGCGATACTGAATATCTTACCTTAGTTGACAGAGAAGAAACCTAAGATTCTGTTTTTTTTTTTTTTTTTTTTTTTTAATGCTAATCATGTTAACGAGGTGTTTCATAGACAAGAAAATATTCTGTTGCTAGTGCTAATTTAAATTGGTTGTTCTTTTGCTGAGTGCTCATCCAAAGTTTCAAACCATAGCTTCTATAGGAAAATGTATCCTTTTGGTCCTCTAAGTCTTCGAGAATAAGTGGCGTTTGGTTCCTAAGGTTTTAAATTAGCCATTTTAGTCCTTGGATTTTCAAGAATAGGTTTAAAAGGTCCTTCAACTTATAAATTTATTAAATTTGAACATAAAATTGGTGCTAGTCAGTTCTTCCATGGTTGATGGCGGAGTTCCATCTCTATATCGATAAAAGAACTCCCCCCCTCCCCCCCAAAAGTTCTCCAAGTTTAATTCTCTACTGGTGACTCAGTCCATCGTTTAGTTACAAGTGGGATCTTTACCCTTCACTCTCCTTTGATTCACAATGAATAGCCAGTGGCCTATTAGTTGAGATGGCTTCAGTTGTGTTTATTGAATTTCTCAAATTTTTAGTGGACTATACGCAAACAGCTTTCAGATAAAAAACCTAGTCTATAATTTATGACCCACTCTTTTGTTGGTTCTTCAAACTTCTTTAGGTCAAAGTGAGTTTGGTTTAGTATTAATTGGTATGCACTTCCTTTTTTGAAGTCGGAGATTTGATCTTCCATCTCCACAATTATTGGACTTCATTTTTTCTGGGTGATTATTGCATCCACAGCAGCTTACTCTGTTGGCTTTTTGGCAATTTCTTGGTTATTAGCACATTAGAGGACTTGGCTCCTATTTGCCCTACTGTATTGTTTTGTAGCCTTCGCTGCAACTATTTGTTCTTTTTTTTTTTTTTTTGCTAATTAACTTTCTCAGCTCAATTTGTCTGCTTTGATGACTTTTTTCCTTCATGTTTCTTACTCGTTTTATGTTTGCTTTGCTCTTTTGAATACTATAGTTATTTGAAAACGAGGCTTATCATTTGATTCAATGCAGTTATTCCTACATGTTTTATGTTTTAGGGAAAGGATGGAACACTTATTGGATTGGATGCTGGTACATATGCTTTAGATGAATTAATCCATAGCCATTGCAACATTGTTGAGGCTTTCTTCACTTCGACAAAATGTCATGCTATAGCTGTGTAATGTAACATTGCTACAAAAATTTAGTTAACCTTCTTCTTGAAACTTGAAAGTTGTTTCCTGTTATAATGTATATGATGATGTGCATTAGGATAAATGCCCTACATCGTGAGGTTTGTTAGTATTGTATTCTTGTGTTTTATATTATAATTTCACCTCCTTTTAATTTAGGACTCCCATGTAAACCAGTATGGTGATCTACCTTGCAGCAGGCTGATAGAACCAAAAGAATATGAATCCACAAAGTACAAAAACATTGCAACTTGGAGCAGTTAGATGATTATGAGGGTGATGGAACGTATGGTTCTGGTCTTTGAATTATTAGAATTTGGAAGAAACATACAAGTACTGACAAGATTATGGTTATCATGAATAGGGTTGATACCTGTTTTTCTCCATCTAACGGTCACAAATGTATATTACCTTTTT

mRNA sequence

ATGGAGTTTGGAGAGCTGAAGAGCACATTTGATAAGCTCAACCTTATTGCTGAAAACCAACAGCAGAGAGCTGTTATCATGTTGGACATGATTTCCAAGGAACACATTCGAATCTCCCAACAGATTTTGAATGCTCCAACCCCATATGACGATGCGGCTGGAGATTCAATTTTAATTGATGGGTTGGAGTTGAGTTTCCAGGTGCACTTACTTGAGTACCATCCATTTAGAATTGTCCAGAGGAAAGTTTATATTGCTTCCACTCTCTGTGCTCTGCTTGCTGTTGCTGCTTTTGAACTATACGCCTGTAAGCACTTTAAACTACATAATCTCTTCCAGATAGATACCTGGTCTAATTCAGAACACACTCTTTTGTTGGCGTTACTTCAAGGAAAGGATGGAACACTTATTGGATTGGATGCTGGTACATATGCTTTAGATGAATTAATCCATAGCCATTGCAACATTGTTGAGGCTTTCTTCACTTCGACAAAATGTCATGCTATAGCTGACTCCCATGTAAACCAGTATGGTGATCTACCTTGCAGCAGGCTGATAGAACCAAAAGAATATGAATCCACAAAGTACAAAAACATTGCAACTTGGAGCAGTTAGATGATTATGAGGGTGATGGAACGTATGGTTCTGGTCTTTGAATTATTAGAATTTGGAAGAAACATACAAGTACTGACAAGATTATGGTTATCATGAATAGGGTTGATACCTGTTTTTCTCCATCTAACGGTCACAAATGTATATTACCTTTTT

Coding sequence (CDS)

ATGGAGTTTGGAGAGCTGAAGAGCACATTTGATAAGCTCAACCTTATTGCTGAAAACCAACAGCAGAGAGCTGTTATCATGTTGGACATGATTTCCAAGGAACACATTCGAATCTCCCAACAGATTTTGAATGCTCCAACCCCATATGACGATGCGGCTGGAGATTCAATTTTAATTGATGGGTTGGAGTTGAGTTTCCAGGTGCACTTACTTGAGTACCATCCATTTAGAATTGTCCAGAGGAAAGTTTATATTGCTTCCACTCTCTGTGCTCTGCTTGCTGTTGCTGCTTTTGAACTATACGCCTGTAAGCACTTTAAACTACATAATCTCTTCCAGATAGATACCTGGTCTAATTCAGAACACACTCTTTTGTTGGCGTTACTTCAAGGAAAGGATGGAACACTTATTGGATTGGATGCTGGTACATATGCTTTAGATGAATTAATCCATAGCCATTGCAACATTGTTGAGGCTTTCTTCACTTCGACAAAATGTCATGCTATAGCTGACTCCCATGTAAACCAGTATGGTGATCTACCTTGCAGCAGGCTGATAGAACCAAAAGAATATGAATCCACAAAGTACAAAAACATTGCAACTTGGAGCAGTTAG

Protein sequence

MEFGELKSTFDKLNLIAENQQQRAVIMLDMISKEHIRISQQILNAPTPYDDAAGDSILIDGLELSFQVHLLEYHPFRIVQRKVYIASTLCALLAVAAFELYACKHFKLHNLFQIDTWSNSEHTLLLALLQGKDGTLIGLDAGTYALDELIHSHCNIVEAFFTSTKCHAIADSHVNQYGDLPCSRLIEPKEYESTKYKNIATWSS
Homology
[Close]
BLAST of Cla97C01G000840 vs. NCBI nr
Match: KAA0042580.1 (WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK05984.1 WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 102.1 bits (253), Expect = 6.0e-18
Identity = 54/84 (64.29%), Postives = 62/84 (73.81%), Query Frame = 0 

Query: 23  RAVIMLDMISKEHIRISQQILNAPTPYDDAAGDSILID--GLELSFQVHLLEYHPFRIVQ 82
           RA   LD+ISK  I IS QILN  +P DD AGD+   D  GLELSFQV LL+YHP  +VQ
Sbjct: 94  RAQNQLDIISKRQIEISLQILNTGSPNDDEAGDTFSSDNGGLELSFQVQLLQYHPLTVVQ 153

Query: 83  RKVYIASTLCALLAVAAFELYACK 105
           RK+YIAST+  LLAVAAFE+Y CK
Sbjct: 154 RKIYIASTISTLLAVAAFEVYTCK 177

[Close]
BLAST of Cla97C01G000840 vs. NCBI nr
Match: ADN33782.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 101.3 bits (251), Expect = 1.0e-17
Identity = 53/84 (63.10%), Postives = 63/84 (75.00%), Query Frame = 0 

Query: 23  RAVIMLDMISKEHIRISQQILNAPTPYDDAAGDSILID--GLELSFQVHLLEYHPFRIVQ 82
           RA   LD+ISK+ I IS QILN  +P DD AGD+   D  GLELSFQV LL+YHP  +VQ
Sbjct: 94  RAQNQLDIISKKQIEISLQILNTGSPNDDEAGDTFSSDNGGLELSFQVQLLQYHPLTVVQ 153

Query: 83  RKVYIASTLCALLAVAAFELYACK 105
           RK+YIAST+  LLAV+AFE+Y CK
Sbjct: 154 RKIYIASTISTLLAVSAFEVYTCK 177

[Close]
BLAST of Cla97C01G000840 vs. NCBI nr
Match: KAA0042578.1 (WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK05982.1 WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 84.3 bits (207), Expect = 1.3e-12
Identity = 53/87 (60.92%), Postives = 59/87 (67.82%), Query Frame = 0 

Query: 23  RAVIMLDMISKEHIRISQQILNAPTPYDDAAGDSILIDG--LELSFQVHLL-EYHP--FR 82
           RA   LD+I K+   ISQQILN   P D   GDSI  D   LELSF+V LL EYH   F 
Sbjct: 94  RAQNQLDIIYKQQNEISQQILNTGNPDDYEGGDSISSDNGWLELSFEVQLLHEYHRPLFT 153

Query: 83  IVQRKVYIASTLCALLAVAAFELYACK 105
           +VQRKVYIAST+  LLAVAAFE+Y CK
Sbjct: 154 LVQRKVYIASTISTLLAVAAFEVYTCK 180

[Close]
BLAST of Cla97C01G000840 vs. NCBI nr
Match: XP_022157130.1 (uncharacterized protein LOC111023927 [Momordica charantia])

HSP 1 Score: 75.5 bits (184), Expect = 6.0e-10
Identity = 45/81 (55.56%), Postives = 52/81 (64.20%), Query Frame = 0 

Query: 28  LDMISKEHIRISQQILNAPTPYDDA-----AGDSILIDGLELSFQVHLLEYHPFRIVQRK 87
           +D+I KE   I QQIL A +  DD      AGDS   DG + SF V LLEY  FRIV+RK
Sbjct: 94  MDIICKEQAEICQQILVARSQLDDVDLAMEAGDS--SDGFQFSFHVKLLEYGAFRIVERK 153

Query: 88  VYIASTLCALLAVAAFELYAC 104
            YI +T+ ALLAV A ELYAC
Sbjct: 154 FYICATVSALLAVTAIELYAC 172

[Close]
BLAST of Cla97C01G000840 vs. NCBI nr
Match: XP_022157176.1 (uncharacterized protein LOC111023953 isoform X2 [Momordica charantia])

HSP 1 Score: 59.3 bits (142), Expect = 4.4e-05
Identity = 38/80 (47.50%), Postives = 43/80 (53.75%), Query Frame = 0 

Query: 28  LDMISKEHIRISQQILNAPT--PYDDAAGDSILIDGLELSFQVHLLEYHPFRIVQRKVYI 87
           LDMI KE I + QQIL A      D A       DG E  F   +L    FR V RKVYI
Sbjct: 92  LDMICKELIEVCQQILVAQNQDDVDLAMEGGDFSDGFEFGFHEKMLVLDHFRFVGRKVYI 151

Query: 88  ASTLCALLAVAAFELYACKH 106
             T+CAL+AV A ELY  K+
Sbjct: 152 YFTVCALVAVTAIELYVSKY 171

[Close]
BLAST of Cla97C01G000840 vs. ExPASy TrEMBL
Match: A0A0A0KM15 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139820 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 4.5e-19
Identity = 58/84 (69.05%), Postives = 63/84 (75.00%), Query Frame = 0 

Query: 23  RAVIMLDMISKEHIRISQQILNAPTPYDDAAGDSILIDG--LELSFQVHLLEYHPFRIVQ 82
           RA   LD+ISK+ I IS QILN  +P DD AGDSI  D   LELSFQV LL YHPF +VQ
Sbjct: 94  RAQNQLDIISKKQIEISLQILNTGSPNDDEAGDSISSDNGWLELSFQVQLLPYHPFTLVQ 153

Query: 83  RKVYIASTLCALLAVAAFELYACK 105
           RKVYIAST+  LLAVAAFELY CK
Sbjct: 154 RKVYIASTIFTLLAVAAFELYTCK 177

[Close]
BLAST of Cla97C01G000840 vs. ExPASy TrEMBL
Match: A0A5A7TGW8 (WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00800 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 2.9e-18
Identity = 54/84 (64.29%), Postives = 62/84 (73.81%), Query Frame = 0 

Query: 23  RAVIMLDMISKEHIRISQQILNAPTPYDDAAGDSILID--GLELSFQVHLLEYHPFRIVQ 82
           RA   LD+ISK  I IS QILN  +P DD AGD+   D  GLELSFQV LL+YHP  +VQ
Sbjct: 94  RAQNQLDIISKRQIEISLQILNTGSPNDDEAGDTFSSDNGGLELSFQVQLLQYHPLTVVQ 153

Query: 83  RKVYIASTLCALLAVAAFELYACK 105
           RK+YIAST+  LLAVAAFE+Y CK
Sbjct: 154 RKIYIASTISTLLAVAAFEVYTCK 177

[Close]
BLAST of Cla97C01G000840 vs. ExPASy TrEMBL
Match: E5GBE1 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 4.9e-18
Identity = 53/84 (63.10%), Postives = 63/84 (75.00%), Query Frame = 0 

Query: 23  RAVIMLDMISKEHIRISQQILNAPTPYDDAAGDSILID--GLELSFQVHLLEYHPFRIVQ 82
           RA   LD+ISK+ I IS QILN  +P DD AGD+   D  GLELSFQV LL+YHP  +VQ
Sbjct: 94  RAQNQLDIISKKQIEISLQILNTGSPNDDEAGDTFSSDNGGLELSFQVQLLQYHPLTVVQ 153

Query: 83  RKVYIASTLCALLAVAAFELYACK 105
           RK+YIAST+  LLAV+AFE+Y CK
Sbjct: 154 RKIYIASTISTLLAVSAFEVYTCK 177

[Close]
BLAST of Cla97C01G000840 vs. ExPASy TrEMBL
Match: A0A5D3C430 (WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00780 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 6.3e-13
Identity = 53/87 (60.92%), Postives = 59/87 (67.82%), Query Frame = 0 

Query: 23  RAVIMLDMISKEHIRISQQILNAPTPYDDAAGDSILIDG--LELSFQVHLL-EYHP--FR 82
           RA   LD+I K+   ISQQILN   P D   GDSI  D   LELSF+V LL EYH   F 
Sbjct: 94  RAQNQLDIIYKQQNEISQQILNTGNPDDYEGGDSISSDNGWLELSFEVQLLHEYHRPLFT 153

Query: 83  IVQRKVYIASTLCALLAVAAFELYACK 105
           +VQRKVYIAST+  LLAVAAFE+Y CK
Sbjct: 154 LVQRKVYIASTISTLLAVAAFEVYTCK 180

[Close]
BLAST of Cla97C01G000840 vs. ExPASy TrEMBL
Match: A0A6J1DS87 (uncharacterized protein LOC111023927 OS=Momordica charantia OX=3673 GN=LOC111023927 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 2.9e-10
Identity = 45/81 (55.56%), Postives = 52/81 (64.20%), Query Frame = 0 

Query: 28  LDMISKEHIRISQQILNAPTPYDDA-----AGDSILIDGLELSFQVHLLEYHPFRIVQRK 87
           +D+I KE   I QQIL A +  DD      AGDS   DG + SF V LLEY  FRIV+RK
Sbjct: 94  MDIICKEQAEICQQILVARSQLDDVDLAMEAGDS--SDGFQFSFHVKLLEYGAFRIVERK 153

Query: 88  VYIASTLCALLAVAAFELYAC 104
            YI +T+ ALLAV A ELYAC
Sbjct: 154 FYICATVSALLAVTAIELYAC 172

The following BLAST results are available for this feature:
BLAST of Cla97C01G000840 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0042580.16.0e-1864.29WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK0598... [more]
ADN33782.11.0e-1763.10hypothetical protein [Cucumis melo subsp. melo][more]
KAA0042578.11.3e-1260.92WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK0598... [more]
XP_022157130.16.0e-1055.56uncharacterized protein LOC111023927 [Momordica charantia][more]
XP_022157176.14.4e-0547.50uncharacterized protein LOC111023953 isoform X2 [Momordica charantia][more]
BLAST of Cla97C01G000840 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cla97C01G000840 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KM154.5e-1969.05Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139820 PE=4 SV=1[more]
A0A5A7TGW82.9e-1864.29WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194... [more]
E5GBE14.9e-1863.10Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
A0A5D3C4306.3e-1360.92WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194... [more]
A0A6J1DS872.9e-1055.56uncharacterized protein LOC111023927 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
BLAST of Cla97C01G000840 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33287OS03G0453550 PROTEINcoord: 27..106
NoneNo IPR availablePANTHERPTHR33287:SF8SUBFAMILY NOT NAMEDcoord: 27..106

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C01G000840.2Cla97C01G000840.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane