ClCG11G018240 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG11G018240
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Protein of unknown function (DUF1218)
Location	CG_Chr11: 31394677 .. 31396843 (-)
RNA-Seq Expression	ClCG11G018240
Synteny	ClCG11G018240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCATAATGGGGATTTGGTGAAGATGTTGAGAAGTTCTTTTCTCTTTCTAATTTTGCTTCTTCTTCACTGCTTTCACCAGTGCAGAGCTTCCTCTCTGTTTCCCATATAAACCCCAACCAGAAGAGAGAGACAGAAACAGAGAAACATTGCTGAATCTGCTCAAGAATTGAGTAGAAACAGATAACAGAGCAGATCTGGGGGAAATAAAGCCTTTCTAACAGACCCATTTCCTCAATCAATGGCTTCCAAATTGATTCTGATTATAGTTTTTGTACTCGACGTTATTGCTTTTGGCCTGGCCGTTGCCGCTGAGCAAAGAAGAAGCACTGTAAGCTTTAGTCTCTCTCCATTGTCGTTTTCTTTTCTGCTCTTTACTGCAAATTTTGTCCATTTGGGGTTCTTTGCTTTCTGGGTCTGTTTGATTTCTCTGATTCTGTTTGTGGGTCGTTTTGGGTTTGGTGAAATTTGTACTGGAAAATCGAAAATTGATCACAGAAGAATCTTTCCTTTTCTGAGTTTTTCTCAGCCACCATACAACGATTTGTAGGTTTCTGCTTCAAATTAGTTTGTTCATTGTCGATGATTGTTGTATCAATCCATCTTCATCCATTAGGGTTAATGAATTGTGGGTTTAGTAGTTAAAAAGCAGGAAAATGGAAAATGATAATCTATTGGTACGAATATTATGAAATGGTGAGAAGATTGTTGATATTTTCATGATTTAAAGCAAACAAACTAAGAATGTAATTCAATAGTGAATATGTTTTGGCTTTTCCAAAATGCAATTCTGAACTGTTCTGAATTGAAGTAGAAGGGAACTTCCATACATTTCTCTATTTCTTATTAAGCACATTGATTCAAGAAGCTAGAGTCGTCGTAACAACATTTGCTTTCGTTCTAGACAATGGCAAAATTAAGATAACTCTTCTCTCGTGTTTCCACCATCACCCACTCATTCAAATTGACATGTGATCTTGCTGATAAGCTGTATCAAATGGAAGCCTTTATATTGAACAAACTGAGGATCGCAAACTCGATAACTGGTTTTGTGTAGCACCCTTTTGAATTCTTCTTTACTTAAAAGATCAAAGAGGTGGTTTCAACTGATTAGCAATGCCTATCTTATAATACTAACATATGATATAATGCATTTAGGCTGATAGTGGTACATTGTTTCTGAGTCGTGTTGGTAAATTTATCGGCAAATTGGTTGGTTGTTAAGAAGCATCGTGTATATATTGTTTGATAACAGGCCAACGTTGTGCAAGATAAAGAAAAGGAATACAACTATTGTGTGTATGACTCCGACATCTCGACAGGCTATGGAGTTGGTGCTTTTCTACTTCTCATGGCCAGCCAGACCCTCATAATGGTGGCTAGCCGATGTTTTTGTTGCGGGAAGTCATTAAGTCCTGGAGGTTCAAGGGCATGGGCTGTTATCCTATTCATAATCTGCTGGTAAGTGAATTTATTTGTGATCTTCACTCCATCAGTTTAGCCTTTGAACAGAAAACTTCAAACTAAAGGGTTCCAACCCAATACACACAATCTTGCAGGGTGTTTTTCTTCATTGCTGAGGTTTGCTTGTTCGCGGGTTCGATAAGGAACGCCTACCACACCAAGTACCGAACCATGTTTGGTGACAATCCTCCATCCTGCCAAACTTTGAGGAAGGGAGTTTTCAGTGCCAGTGCAGCCTTCATTTTCTTCAATGCCATTGTATCAGAACTCTACTATGTATTCTACTCCAAGGCGAGAGAAAGCTTCCTTCCATATGGCGGGGAAGCTGGCGTCGGCATGGGAACCTACAAATGAGTGAATGTGTAGTCAATTCTAATAGGTTACTCTTCACCTTCTATCGACGTTCCCGGACCGATTTTGAGATAATTTTGCATATCAGCTACTGGTTTTAGTTAGGAAGAAATGTCGTTATCATAATTTTTTCTCTGTGAAGTTCTTTGTTCTCCCTCCCTTTTAACAACTGCTGCTGGGCTTTTCTATTATTTTTTTTTTTTTTCCCATTTTGGTGGATTGTTACATTTGTATTGACAATAAGAGACTTCCTATAGATATTTGTATCTTTTATGAGACCTCAGTGACATGTATGTTCTTATACTTTCCATTTTACCACTGGGTATTTGATAATATTGCGGAAAAATTTAGAAAA

mRNA sequence

GCATAATGGGGATTTGGTGAAGATGTTGAGAAGTTCTTTTCTCTTTCTAATTTTGCTTCTTCTTCACTGCTTTCACCAGTGCAGAGCTTCCTCTCTGTTTCCCATATAAACCCCAACCAGAAGAGAGAGACAGAAACAGAGAAACATTGCTGAATCTGCTCAAGAATTGAGTAGAAACAGATAACAGAGCAGATCTGGGGGAAATAAAGCCTTTCTAACAGACCCATTTCCTCAATCAATGGCTTCCAAATTGATTCTGATTATAGTTTTTGTACTCGACGTTATTGCTTTTGGCCTGGCCGTTGCCGCTGAGCAAAGAAGAAGCACTGCCAACGTTGTGCAAGATAAAGAAAAGGAATACAACTATTGTGTGTATGACTCCGACATCTCGACAGGCTATGGAGTTGGTGCTTTTCTACTTCTCATGGCCAGCCAGACCCTCATAATGGTGGCTAGCCGATGTTTTTGTTGCGGGAAGTCATTAAGTCCTGGAGGTTCAAGGGCATGGGCTGTTATCCTATTCATAATCTGCTGGGTGTTTTTCTTCATTGCTGAGGTTTGCTTGTTCGCGGGTTCGATAAGGAACGCCTACCACACCAAGTACCGAACCATGTTTGGTGACAATCCTCCATCCTGCCAAACTTTGAGGAAGGGAGTTTTCAGTGCCAGTGCAGCCTTCATTTTCTTCAATGCCATTGTATCAGAACTCTACTATGTATTCTACTCCAAGGCGAGAGAAAGCTTCCTTCCATATGGCGGGGAAGCTGGCGTCGGCATGGGAACCTACAAATGAGTGAATGTGTAGTCAATTCTAATAGGTTACTCTTCACCTTCTATCGACGTTCCCGGACCGATTTTGAGATAATTTTGCATATCAGCTACTGGTTTTAGTTAGGAAGAAATGTCGTTATCATAATTTTTTCTCTGTGAAGTTCTTTGTTCTCCCTCCCTTTTAACAACTGCTGCTGGGCTTTTCTATTATTTTTTTTTTTTTTCCCATTTTGGTGGATTGTTACATTTGTATTGACAATAAGAGACTTCCTATAGATATTTGTATCTTTTATGAGACCTCAGTGACATGTATGTTCTTATACTTTCCATTTTACCACTGGGTATTTGATAATATTGCGGAAAAATTTAGAAAA

Coding sequence (CDS)

ATGGCTTCCAAATTGATTCTGATTATAGTTTTTGTACTCGACGTTATTGCTTTTGGCCTGGCCGTTGCCGCTGAGCAAAGAAGAAGCACTGCCAACGTTGTGCAAGATAAAGAAAAGGAATACAACTATTGTGTGTATGACTCCGACATCTCGACAGGCTATGGAGTTGGTGCTTTTCTACTTCTCATGGCCAGCCAGACCCTCATAATGGTGGCTAGCCGATGTTTTTGTTGCGGGAAGTCATTAAGTCCTGGAGGTTCAAGGGCATGGGCTGTTATCCTATTCATAATCTGCTGGGTGTTTTTCTTCATTGCTGAGGTTTGCTTGTTCGCGGGTTCGATAAGGAACGCCTACCACACCAAGTACCGAACCATGTTTGGTGACAATCCTCCATCCTGCCAAACTTTGAGGAAGGGAGTTTTCAGTGCCAGTGCAGCCTTCATTTTCTTCAATGCCATTGTATCAGAACTCTACTATGTATTCTACTCCAAGGCGAGAGAAAGCTTCCTTCCATATGGCGGGGAAGCTGGCGTCGGCATGGGAACCTACAAATGA

Protein sequence

MASKLILIIVFVLDVIAFGLAVAAEQRRSTANVVQDKEKEYNYCVYDSDISTGYGVGAFLLLMASQTLIMVASRCFCCGKSLSPGGSRAWAVILFIICWVFFFIAEVCLFAGSIRNAYHTKYRTMFGDNPPSCQTLRKGVFSASAAFIFFNAIVSELYYVFYSKARESFLPYGGEAGVGMGTYK

Homology

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BLAST of ClCG11G018240 vs. NCBI nr
Match: XP_038900268.1 (uncharacterized protein LOC120087350 [Benincasa hispida])

HSP 1 Score: 359.4 bits (921), Expect = 1.9e-95
Identity = 179/184 (97.28%), Postives = 180/184 (97.83%), Query Frame = 0


Query: 1   MASKLILIIVFVLDVIAFGLAVAAEQRRSTANVVQDKEKEYNYCVYDSDISTGYGVGAFL 60
           MASKLILIIVFVLDVIAFGLAVAAEQRRSTANVVQDKEKEYNYCVYDSDISTGYGVGAFL
Sbjct: 1   MASKLILIIVFVLDVIAFGLAVAAEQRRSTANVVQDKEKEYNYCVYDSDISTGYGVGAFL 60

Query: 61  LLMASQTLIMVASRCFCCGKSLSPGGSRAWAVILFIICWVFFFIAEVCLFAGSIRNAYHT 120
           LLMASQTLIMVASRCFCCGKSLSPGGSRAWAVILFIICWVFFFIAEVCLFAGS+RNAYHT
Sbjct: 61  LLMASQTLIMVASRCFCCGKSLSPGGSRAWAVILFIICWVFFFIAEVCLFAGSVRNAYHT 120

Query: 121 KYRTMFGDNPPSCQTLRKGVFSASAAFIFFNAIVSELYYVFYSKARESFLPYGGEAGVGM 180
           KYRTMFGDNPPSCQTLRKGVF A AAFIF NAIVSELYYVFYSKARESFLPYGGE GVGM
Sbjct: 121 KYRTMFGDNPPSCQTLRKGVFGAGAAFIFLNAIVSELYYVFYSKARESFLPYGGETGVGM 180

Query: 181 GTYK 185
           GTYK
Sbjct: 181 GTYK 184

[Close]

BLAST of ClCG11G018240 vs. NCBI nr
Match: XP_031740219.1 (uncharacterized protein LOC101208795 [Cucumis sativus] >XP_031740220.1 uncharacterized protein LOC101208795 [Cucumis sativus] >KGN55148.1 hypothetical protein Csa_012625 [Cucumis sativus])

HSP 1 Score: 357.5 bits (916), Expect = 7.1e-95
Identity = 177/184 (96.20%), Postives = 179/184 (97.28%), Query Frame = 0


Query: 1   MASKLILIIVFVLDVIAFGLAVAAEQRRSTANVVQDKEKEYNYCVYDSDISTGYGVGAFL 60
           MASKLILIIVFVLD+IAFGLAVAAEQRRSTANVVQDKEKEYNYCVYDSDISTGYGVGAFL
Sbjct: 1   MASKLILIIVFVLDIIAFGLAVAAEQRRSTANVVQDKEKEYNYCVYDSDISTGYGVGAFL 60

Query: 61  LLMASQTLIMVASRCFCCGKSLSPGGSRAWAVILFIICWVFFFIAEVCLFAGSIRNAYHT 120
           LLMASQTLIM ASRCFCCGKSLSPGGSRAWAVILFIICWVFFFIAEVCLFAGS+RNAYHT
Sbjct: 61  LLMASQTLIMAASRCFCCGKSLSPGGSRAWAVILFIICWVFFFIAEVCLFAGSVRNAYHT 120

Query: 121 KYRTMFGDNPPSCQTLRKGVFSASAAFIFFNAIVSELYYVFYSKARESFLPYGGEAGVGM 180
           KYRTMFGDNPPSCQTLRKGVF A AAFIF NAIVSELYYVFYSKARESFLPYGGE GVGM
Sbjct: 121 KYRTMFGDNPPSCQTLRKGVFGAGAAFIFLNAIVSELYYVFYSKARESFLPYGGETGVGM 180

Query: 181 GTYK 185
           GTYK
Sbjct: 181 GTYK 184

[Close]

BLAST of ClCG11G018240 vs. NCBI nr
Match: XP_008452482.1 (PREDICTED: uncharacterized protein LOC103493502 [Cucumis melo] >KAA0064347.1 DUF1218 domain-containing protein [Cucumis melo var. makuwa] >TYK20240.1 DUF1218 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 349.4 bits (895), Expect = 1.9e-92
Identity = 174/184 (94.57%), Postives = 178/184 (96.74%), Query Frame = 0


Query: 1   MASKLILIIVFVLDVIAFGLAVAAEQRRSTANVVQDKEKEYNYCVYDSDISTGYGVGAFL 60
           MASKLILIIVFVLDVIAFGLAVAAEQRRSTANVVQDKEK+YNYCVYDSD+STGYGVGAFL
Sbjct: 1   MASKLILIIVFVLDVIAFGLAVAAEQRRSTANVVQDKEKDYNYCVYDSDVSTGYGVGAFL 60

Query: 61  LLMASQTLIMVASRCFCCGKSLSPGGSRAWAVILFIICWVFFFIAEVCLFAGSIRNAYHT 120
           LLMASQTLIM ASRCFCCGKSLSPGGSRA AVILFIICWVFFFIAEVCLFAGS+RNAYHT
Sbjct: 61  LLMASQTLIMAASRCFCCGKSLSPGGSRASAVILFIICWVFFFIAEVCLFAGSVRNAYHT 120

Query: 121 KYRTMFGDNPPSCQTLRKGVFSASAAFIFFNAIVSELYYVFYSKARESFLPYGGEAGVGM 180
           KYRTMFGDNPPSC+TLRKGVF A AAFIF NAIVSELYYVFYSKARESFLPYGGE GVGM
Sbjct: 121 KYRTMFGDNPPSCRTLRKGVFGAGAAFIFLNAIVSELYYVFYSKARESFLPYGGETGVGM 180

Query: 181 GTYK 185
           GTYK
Sbjct: 181 GTYK 184

[Close]

BLAST of ClCG11G018240 vs. NCBI nr
Match: XP_022935762.1 (uncharacterized protein LOC111442584 [Cucurbita moschata] >XP_023535137.1 uncharacterized protein LOC111796652 [Cucurbita pepo subsp. pepo] >KAG6591977.1 hypothetical protein SDJN03_14323, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024853.1 hypothetical protein SDJN02_13672 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 348.6 bits (893), Expect = 3.3e-92
Identity = 173/184 (94.02%), Postives = 175/184 (95.11%), Query Frame = 0


Query: 1   MASKLILIIVFVLDVIAFGLAVAAEQRRSTANVVQDKEKEYNYCVYDSDISTGYGVGAFL 60
           MASKL+LIIV VLDVIAFGLAVAAEQRRSTANVV D EK YNYCVYDSDISTGYGVGAFL
Sbjct: 1   MASKLVLIIVIVLDVIAFGLAVAAEQRRSTANVVPDSEKNYNYCVYDSDISTGYGVGAFL 60

Query: 61  LLMASQTLIMVASRCFCCGKSLSPGGSRAWAVILFIICWVFFFIAEVCLFAGSIRNAYHT 120
           LLMASQ LIMVASRCFCCGKSLSPGGSRAWA+ILFIICWVFFFIAEVCLFAGSIRNAYHT
Sbjct: 61  LLMASQALIMVASRCFCCGKSLSPGGSRAWAIILFIICWVFFFIAEVCLFAGSIRNAYHT 120

Query: 121 KYRTMFGDNPPSCQTLRKGVFSASAAFIFFNAIVSELYYVFYSKARESFLPYGGEAGVGM 180
           KYRTMFGDNPPSCQTLRKGVF A AAFIF NAIVSELYYVFYSKARESFLPYGGE GVGM
Sbjct: 121 KYRTMFGDNPPSCQTLRKGVFGAGAAFIFLNAIVSELYYVFYSKARESFLPYGGETGVGM 180

Query: 181 GTYK 185
           GTYK
Sbjct: 181 GTYK 184

[Close]

BLAST of ClCG11G018240 vs. NCBI nr
Match: XP_022976585.1 (uncharacterized protein LOC111476938 [Cucurbita maxima] >XP_022976586.1 uncharacterized protein LOC111476938 [Cucurbita maxima])

HSP 1 Score: 347.8 bits (891), Expect = 5.6e-92
Identity = 171/184 (92.93%), Postives = 175/184 (95.11%), Query Frame = 0


Query: 1   MASKLILIIVFVLDVIAFGLAVAAEQRRSTANVVQDKEKEYNYCVYDSDISTGYGVGAFL 60
           MASKL+LIIV VLDVIAFGLAVAAEQRRSTANVV D EK YNYCVYDSD+STGYGVGAFL
Sbjct: 1   MASKLVLIIVIVLDVIAFGLAVAAEQRRSTANVVPDSEKNYNYCVYDSDVSTGYGVGAFL 60

Query: 61  LLMASQTLIMVASRCFCCGKSLSPGGSRAWAVILFIICWVFFFIAEVCLFAGSIRNAYHT 120
           LLMASQ LIMVASRCFCCGKSLSPGGSRAWA+ILFIICWVFFFIAEVCLFAGS+RNAYHT
Sbjct: 61  LLMASQALIMVASRCFCCGKSLSPGGSRAWAIILFIICWVFFFIAEVCLFAGSVRNAYHT 120

Query: 121 KYRTMFGDNPPSCQTLRKGVFSASAAFIFFNAIVSELYYVFYSKARESFLPYGGEAGVGM 180
           KYRTMFGDNPPSCQTLRKGVF A AAFIF NAIVSELYYVFYSKARESFLPYGGE GVGM
Sbjct: 121 KYRTMFGDNPPSCQTLRKGVFGAGAAFIFLNAIVSELYYVFYSKARESFLPYGGETGVGM 180

Query: 181 GTYK 185
           GTYK
Sbjct: 181 GTYK 184

[Close]

BLAST of ClCG11G018240 vs. ExPASy TrEMBL
Match: A0A0A0L071 (Fiber protein Fb34 OS=Cucumis sativus OX=3659 GN=Csa_4G638370 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 3.5e-95
Identity = 177/184 (96.20%), Postives = 179/184 (97.28%), Query Frame = 0


Query: 1   MASKLILIIVFVLDVIAFGLAVAAEQRRSTANVVQDKEKEYNYCVYDSDISTGYGVGAFL 60
           MASKLILIIVFVLD+IAFGLAVAAEQRRSTANVVQDKEKEYNYCVYDSDISTGYGVGAFL
Sbjct: 1   MASKLILIIVFVLDIIAFGLAVAAEQRRSTANVVQDKEKEYNYCVYDSDISTGYGVGAFL 60

Query: 61  LLMASQTLIMVASRCFCCGKSLSPGGSRAWAVILFIICWVFFFIAEVCLFAGSIRNAYHT 120
           LLMASQTLIM ASRCFCCGKSLSPGGSRAWAVILFIICWVFFFIAEVCLFAGS+RNAYHT
Sbjct: 61  LLMASQTLIMAASRCFCCGKSLSPGGSRAWAVILFIICWVFFFIAEVCLFAGSVRNAYHT 120

Query: 121 KYRTMFGDNPPSCQTLRKGVFSASAAFIFFNAIVSELYYVFYSKARESFLPYGGEAGVGM 180
           KYRTMFGDNPPSCQTLRKGVF A AAFIF NAIVSELYYVFYSKARESFLPYGGE GVGM
Sbjct: 121 KYRTMFGDNPPSCQTLRKGVFGAGAAFIFLNAIVSELYYVFYSKARESFLPYGGETGVGM 180

Query: 181 GTYK 185
           GTYK
Sbjct: 181 GTYK 184

[Close]

BLAST of ClCG11G018240 vs. ExPASy TrEMBL
Match: A0A5A7VBE4 (DUF1218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003790 PE=4 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 9.4e-93
Identity = 174/184 (94.57%), Postives = 178/184 (96.74%), Query Frame = 0


Query: 1   MASKLILIIVFVLDVIAFGLAVAAEQRRSTANVVQDKEKEYNYCVYDSDISTGYGVGAFL 60
           MASKLILIIVFVLDVIAFGLAVAAEQRRSTANVVQDKEK+YNYCVYDSD+STGYGVGAFL
Sbjct: 1   MASKLILIIVFVLDVIAFGLAVAAEQRRSTANVVQDKEKDYNYCVYDSDVSTGYGVGAFL 60

Query: 61  LLMASQTLIMVASRCFCCGKSLSPGGSRAWAVILFIICWVFFFIAEVCLFAGSIRNAYHT 120
           LLMASQTLIM ASRCFCCGKSLSPGGSRA AVILFIICWVFFFIAEVCLFAGS+RNAYHT
Sbjct: 61  LLMASQTLIMAASRCFCCGKSLSPGGSRASAVILFIICWVFFFIAEVCLFAGSVRNAYHT 120

Query: 121 KYRTMFGDNPPSCQTLRKGVFSASAAFIFFNAIVSELYYVFYSKARESFLPYGGEAGVGM 180
           KYRTMFGDNPPSC+TLRKGVF A AAFIF NAIVSELYYVFYSKARESFLPYGGE GVGM
Sbjct: 121 KYRTMFGDNPPSCRTLRKGVFGAGAAFIFLNAIVSELYYVFYSKARESFLPYGGETGVGM 180

Query: 181 GTYK 185
           GTYK
Sbjct: 181 GTYK 184

[Close]

BLAST of ClCG11G018240 vs. ExPASy TrEMBL
Match: A0A1S3BTB6 (uncharacterized protein LOC103493502 OS=Cucumis melo OX=3656 GN=LOC103493502 PE=4 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 9.4e-93
Identity = 174/184 (94.57%), Postives = 178/184 (96.74%), Query Frame = 0


Query: 1   MASKLILIIVFVLDVIAFGLAVAAEQRRSTANVVQDKEKEYNYCVYDSDISTGYGVGAFL 60
           MASKLILIIVFVLDVIAFGLAVAAEQRRSTANVVQDKEK+YNYCVYDSD+STGYGVGAFL
Sbjct: 1   MASKLILIIVFVLDVIAFGLAVAAEQRRSTANVVQDKEKDYNYCVYDSDVSTGYGVGAFL 60

Query: 61  LLMASQTLIMVASRCFCCGKSLSPGGSRAWAVILFIICWVFFFIAEVCLFAGSIRNAYHT 120
           LLMASQTLIM ASRCFCCGKSLSPGGSRA AVILFIICWVFFFIAEVCLFAGS+RNAYHT
Sbjct: 61  LLMASQTLIMAASRCFCCGKSLSPGGSRASAVILFIICWVFFFIAEVCLFAGSVRNAYHT 120

Query: 121 KYRTMFGDNPPSCQTLRKGVFSASAAFIFFNAIVSELYYVFYSKARESFLPYGGEAGVGM 180
           KYRTMFGDNPPSC+TLRKGVF A AAFIF NAIVSELYYVFYSKARESFLPYGGE GVGM
Sbjct: 121 KYRTMFGDNPPSCRTLRKGVFGAGAAFIFLNAIVSELYYVFYSKARESFLPYGGETGVGM 180

Query: 181 GTYK 185
           GTYK
Sbjct: 181 GTYK 184

[Close]

BLAST of ClCG11G018240 vs. ExPASy TrEMBL
Match: A0A6J1F6H9 (uncharacterized protein LOC111442584 OS=Cucurbita moschata OX=3662 GN=LOC111442584 PE=4 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 1.6e-92
Identity = 173/184 (94.02%), Postives = 175/184 (95.11%), Query Frame = 0


Query: 1   MASKLILIIVFVLDVIAFGLAVAAEQRRSTANVVQDKEKEYNYCVYDSDISTGYGVGAFL 60
           MASKL+LIIV VLDVIAFGLAVAAEQRRSTANVV D EK YNYCVYDSDISTGYGVGAFL
Sbjct: 1   MASKLVLIIVIVLDVIAFGLAVAAEQRRSTANVVPDSEKNYNYCVYDSDISTGYGVGAFL 60

Query: 61  LLMASQTLIMVASRCFCCGKSLSPGGSRAWAVILFIICWVFFFIAEVCLFAGSIRNAYHT 120
           LLMASQ LIMVASRCFCCGKSLSPGGSRAWA+ILFIICWVFFFIAEVCLFAGSIRNAYHT
Sbjct: 61  LLMASQALIMVASRCFCCGKSLSPGGSRAWAIILFIICWVFFFIAEVCLFAGSIRNAYHT 120

Query: 121 KYRTMFGDNPPSCQTLRKGVFSASAAFIFFNAIVSELYYVFYSKARESFLPYGGEAGVGM 180
           KYRTMFGDNPPSCQTLRKGVF A AAFIF NAIVSELYYVFYSKARESFLPYGGE GVGM
Sbjct: 121 KYRTMFGDNPPSCQTLRKGVFGAGAAFIFLNAIVSELYYVFYSKARESFLPYGGETGVGM 180

Query: 181 GTYK 185
           GTYK
Sbjct: 181 GTYK 184

[Close]

BLAST of ClCG11G018240 vs. ExPASy TrEMBL
Match: A0A6J1IJW2 (uncharacterized protein LOC111476938 OS=Cucurbita maxima OX=3661 GN=LOC111476938 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 2.7e-92
Identity = 171/184 (92.93%), Postives = 175/184 (95.11%), Query Frame = 0


Query: 1   MASKLILIIVFVLDVIAFGLAVAAEQRRSTANVVQDKEKEYNYCVYDSDISTGYGVGAFL 60
           MASKL+LIIV VLDVIAFGLAVAAEQRRSTANVV D EK YNYCVYDSD+STGYGVGAFL
Sbjct: 1   MASKLVLIIVIVLDVIAFGLAVAAEQRRSTANVVPDSEKNYNYCVYDSDVSTGYGVGAFL 60

Query: 61  LLMASQTLIMVASRCFCCGKSLSPGGSRAWAVILFIICWVFFFIAEVCLFAGSIRNAYHT 120
           LLMASQ LIMVASRCFCCGKSLSPGGSRAWA+ILFIICWVFFFIAEVCLFAGS+RNAYHT
Sbjct: 61  LLMASQALIMVASRCFCCGKSLSPGGSRAWAIILFIICWVFFFIAEVCLFAGSVRNAYHT 120

Query: 121 KYRTMFGDNPPSCQTLRKGVFSASAAFIFFNAIVSELYYVFYSKARESFLPYGGEAGVGM 180
           KYRTMFGDNPPSCQTLRKGVF A AAFIF NAIVSELYYVFYSKARESFLPYGGE GVGM
Sbjct: 121 KYRTMFGDNPPSCQTLRKGVFGAGAAFIFLNAIVSELYYVFYSKARESFLPYGGETGVGM 180

Query: 181 GTYK 185
           GTYK
Sbjct: 181 GTYK 184

[Close]

BLAST of ClCG11G018240 vs. TAIR 10
Match: AT4G27435.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 257.3 bits (656), Expect = 9.4e-69
Identity = 127/173 (73.41%), Postives = 145/173 (83.82%), Query Frame = 0


Query: 1   MASKLILIIVFVLDVIAFGLAVAAEQRRSTANVVQDKEKEYNYCVYDSDISTGYGVGAFL 60
           MASK++  IVFV ++IAFGLAVAAEQRRSTA VVQD E +YNYCVYDSD +TGYGVGAFL
Sbjct: 1   MASKIVSAIVFVFNLIAFGLAVAAEQRRSTARVVQDTEVQYNYCVYDSDRATGYGVGAFL 60

Query: 61  LLMASQTLIMVASRCFCCGKSLSPGGSRAWAVILFIICWVFFFIAEVCLFAGSIRNAYHT 120
             +ASQ LIM+ SRCFCCGK L PGGSRA A+ILFI+ W+FF IAE+CL AGS+ NAYHT
Sbjct: 61  FSVASQILIMLVSRCFCCGKPLKPGGSRALALILFIVSWMFFLIAEICLLAGSVENAYHT 120

Query: 121 KYRTMFGDNPPSCQTLRKGVFSASAAFIFFNAIVSELYYVFYSKARESFL-PY 173
           KYRTMF DNPP CQTLRKGVF+A A+F+FFNAIVS+ YY FY  A E+ L PY
Sbjct: 121 KYRTMFMDNPPDCQTLRKGVFAAGASFVFFNAIVSQFYYFFYFSAAEASLSPY 173

[Close]

BLAST of ClCG11G018240 vs. TAIR 10
Match: AT3G15480.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 240.0 bits (611), Expect = 1.5e-63
Identity = 115/170 (67.65%), Postives = 143/170 (84.12%), Query Frame = 0


Query: 1   MASKLILIIVFVLDVIAFGLAVAAEQRRSTANVVQDKEKEYNYCVYDSDISTGYGVGAFL 60
           MASKL++IIVF+LD+IA GLA+AAEQRRS   V  D++K+Y+YCVY +DI+T YG GAF+
Sbjct: 1   MASKLVVIIVFILDLIAVGLAIAAEQRRSVGKVETDRDKQYDYCVYGTDIATSYGAGAFV 60

Query: 61  LLMASQTLIMVASRCFCCGKSLSPGGSRAWAVILFIICWVFFFIAEVCLFAGSIRNAYHT 120
           LL  SQ LIM ASRCFCCGKSL+PGGSRA A+ILF+ICWVFF IAE+CL A SIRNAYHT
Sbjct: 61  LLFVSQVLIMAASRCFCCGKSLNPGGSRACAIILFLICWVFFLIAEMCLLAASIRNAYHT 120

Query: 121 KYRTMFG-DNPPSCQTLRKGVFSASAAFIFFNAIVSELYYVFYSKARESF 170
           +YR M+  ++PPSC+ +RKGVF+A AAF  F AIVS+ YYV YS+AR+++
Sbjct: 121 QYRKMWKVEDPPSCEVIRKGVFAAGAAFTLFTAIVSQFYYVCYSRARDAY 170

[Close]

BLAST of ClCG11G018240 vs. TAIR 10
Match: AT1G52910.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 238.0 bits (606), Expect = 5.9e-63
Identity = 114/170 (67.06%), Postives = 139/170 (81.76%), Query Frame = 0


Query: 1   MASKLILIIVFVLDVIAFGLAVAAEQRRSTANVVQDKEKEYNYCVYDSDISTGYGVGAFL 60
           MASKL++IIVF+LD+IA GLA+AAEQRRS   VV D EKE+ +C Y SDI+T YG GAF+
Sbjct: 1   MASKLVIIIVFILDLIAVGLAIAAEQRRSVGKVVPDGEKEFEHCEYGSDIATSYGAGAFV 60

Query: 61  LLMASQTLIMVASRCFCCGKSLSPGGSRAWAVILFIICWVFFFIAEVCLFAGSIRNAYHT 120
           LL  SQ +IMVASRCFCCGK+L PGGSRA  ++LF+ICWVFF IAEVCL AGSIRNAYHT
Sbjct: 61  LLFISQVIIMVASRCFCCGKALKPGGSRACGIMLFLICWVFFLIAEVCLLAGSIRNAYHT 120

Query: 121 KYRTMFG-DNPPSCQTLRKGVFSASAAFIFFNAIVSELYYVFYSKARESF 170
            YR M+  +NPPSC+ +RKGVF+A A+F  F AIVS+ YY+ YS+AR+ +
Sbjct: 121 TYRRMWNIENPPSCEVIRKGVFAAGASFALFTAIVSQFYYISYSRARDGY 170

[Close]

BLAST of ClCG11G018240 vs. TAIR 10
Match: AT1G61065.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 226.9 bits (577), Expect = 1.4e-59
Identity = 110/167 (65.87%), Postives = 138/167 (82.63%), Query Frame = 0


Query: 1   MASKLILIIVFVLDVIAFGLAVAAEQRRSTANVVQDKEKEYNYCVYDSDISTGYGVGAFL 60
           MAS L+L++VFV D+IAFGLAVAAEQRR+T  + ++  ++ +YCVYD DI+TG GVG+FL
Sbjct: 1   MASVLLLLLVFVFDLIAFGLAVAAEQRRTTWQISRE-SRDLSYCVYDKDIATGLGVGSFL 60

Query: 61  LLMASQTLIMVASRCFCCGKSLSPGGSRAWAVILFIICWVFFFIAEVCLFAGSIRNAYHT 120
           +L+ASQ LIMVASRC CCG++L+P GSR+WA+ LFI  WVFFFIA+VCL AGS+RNAYHT
Sbjct: 61  VLLASQLLIMVASRCLCCGRALTPSGSRSWAIFLFITTWVFFFIAQVCLLAGSVRNAYHT 120

Query: 121 KYRTMFGDNPPSCQTLRKGVFSASAAFIFFNAIVSELYYVFYSKARE 168
           KYR  FG+  PSC++LRKGVF A AAFI    IVSELYYV  S+A++
Sbjct: 121 KYRVYFGNTSPSCRSLRKGVFGAGAAFIVLTGIVSELYYVTLSRAKD 166

[Close]

BLAST of ClCG11G018240 vs. TAIR 10
Match: AT1G13380.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 166.0 bits (419), Expect = 2.8e-41
Identity = 77/167 (46.11%), Postives = 114/167 (68.26%), Query Frame = 0


Query: 2   ASKLILIIVFVLDVIAFGLAVAAEQRRSTANVVQDKEKEYNYCVYDSDISTGYGVGAFLL 61
           AS L+ I+V  L ++AFG ++AAE+RRS    +QD      +CVYDSD++TGYGVGAFL 
Sbjct: 6   ASTLVFILVVALSLVAFGFSIAAERRRSIGKSIQDPITNTTFCVYDSDVATGYGVGAFLF 65

Query: 62  LMASQTLIMVASRCFCCGKSLSPGGSRAWAVILFIICWVFFFIAEVCLFAGSIRNAYHTK 121
           L++S++L+M  ++C C G+ L+PG  RAW++I FI  W+ F +AE C+ AG+ +NAYHTK
Sbjct: 66  LLSSESLLMSVTKCMCFGRPLAPGSDRAWSIIYFISSWMTFLVAEACVIAGATKNAYHTK 125

Query: 122 YRTMFGDNPPSCQTLRKGVFSASAAFIFFNAIVSELYYVFYSKARES 169
           Y         SC +LRKG+F A A FI    +++  YY++++K+  S
Sbjct: 126 Y---LSSQTFSCASLRKGIFIAGAVFIVATMVLNVYYYMYFTKSVSS 169

The following BLAST results are available for this feature:

BLAST of ClCG11G018240 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900268.1	1.9e-95	97.28	uncharacterized protein LOC120087350 [Benincasa hispida]	[more]
XP_031740219.1	7.1e-95	96.20	uncharacterized protein LOC101208795 [Cucumis sativus] >XP_031740220.1 uncharact...	[more]
XP_008452482.1	1.9e-92	94.57	PREDICTED: uncharacterized protein LOC103493502 [Cucumis melo] >KAA0064347.1 DUF...	[more]
XP_022935762.1	3.3e-92	94.02	uncharacterized protein LOC111442584 [Cucurbita moschata] >XP_023535137.1 unchar...	[more]
XP_022976585.1	5.6e-92	92.93	uncharacterized protein LOC111476938 [Cucurbita maxima] >XP_022976586.1 uncharac...	[more]

BLAST of ClCG11G018240 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of ClCG11G018240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L071	3.5e-95	96.20	Fiber protein Fb34 OS=Cucumis sativus OX=3659 GN=Csa_4G638370 PE=4 SV=1	[more]
A0A5A7VBE4	9.4e-93	94.57	DUF1218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3BTB6	9.4e-93	94.57	uncharacterized protein LOC103493502 OS=Cucumis melo OX=3656 GN=LOC103493502 PE=...	[more]
A0A6J1F6H9	1.6e-92	94.02	uncharacterized protein LOC111442584 OS=Cucurbita moschata OX=3662 GN=LOC1114425...	[more]
A0A6J1IJW2	2.7e-92	92.93	uncharacterized protein LOC111476938 OS=Cucurbita maxima OX=3661 GN=LOC111476938...	[more]

BLAST of ClCG11G018240 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27435.1	9.4e-69	73.41	Protein of unknown function (DUF1218)	[more]
AT3G15480.1	1.5e-63	67.65	Protein of unknown function (DUF1218)	[more]
AT1G52910.1	5.9e-63	67.06	Protein of unknown function (DUF1218)	[more]
AT1G61065.1	1.4e-59	65.87	Protein of unknown function (DUF1218)	[more]
AT1G13380.1	2.8e-41	46.11	Protein of unknown function (DUF1218)	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009606	Modifying wall lignin-1/2	PFAM	PF06749	DUF1218	coord: 58..152 e-value: 5.9E-28 score: 97.2
None	No IPR available	PANTHER	PTHR31769:SF56	SUBFAMILY NOT NAMED	coord: 1..184
None	No IPR available	PANTHER	PTHR31769	OS07G0462200 PROTEIN-RELATED	coord: 1..184

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG11G018240.1	ClCG11G018240.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane