ClCG11G017230 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTCATATGACTGGATGTTGGTTCATCTCTTGTTCATTATTTTATTTTACCAGAAACTTATGTTATTATTATCTGTCTTCAATTGAAGTAGACTTTGAGTCTCCATCAAAAGGACGAAAACTCTTACCAGTAGGTGCTATACTTGGAATTGTGGCTGCAGTTGCCCTTGTTATAATTTCAATTCTTGGAATTCTATGGTGGCAAGGTTGCCTTGGACGGAAAAACACACTTCATCAAGGTAATTTAACAGTGGAGATAAATCTCATTGCTGAACTTACACTTATTTCTGTTGGGATGCTCAAAGATTAGCCGATAACTGTCATGACGACAAACAATATTATTTTGAGTTCATGTGTCATGTTGTAGTTTGCAGTTCTATTCATATGGGATAAGGAAAAATATTGAGAATTAACAATCTTAAATTTCCTTAGTATCTATCAGCTGAAATAGGCATATTTGAATATTGGTCGACTCTTCTTTCATTTACACACACTTCTTGTGCAGATCTTAGAGGTCTAGATCTGAAAACTGGTTCATTCACATTAAGGCAAATCAAAGCTGCCACAAATAATTTTGACGTTTCTAATAAGATTGGAGAAGGTGGTTTTGGTCCTGTTTATAAGGTGTTTTCACAATTCAACACGACTATAAATCTCTTCTTTCTTAGATTTGTATGGTTCTGATGTGAAGTTTTTGGATGGGAATGCAGGGTTTTCTTTTGGATGGCACCATAATTGCAGTGAAACAACTTTCCTCCAAGTCAATGCAAGGAGCCCACGAGTTTGTGAATGAGATAGGCCTCATATCTGCTTTGCATCACCCAAATCTAGTTAAACTTTATGGATCTTGTACCGAAGAAAATCATCTTTTGCTAGTGTATGAATACATGGAAAATAATAGTCTTGCTCAGGCTATGTTTGGTAAGTTTTTATTGTGTGCTTTAAATTTATGAACATATTTTGTGAGTTTTCATACGTCAGATGTATTGACCATATTAATTATTATTTTATGAATTGAAGGACCTGAAGAAGGTTGAAATTAGATTGGCCAACAAGGCAGAAAATTTGTATTGGTATAGCCAAAGACTTGGCCTATCTTCATGAGGAATCAAGATTGAAGATTGTTCACAGAGATATCAAAGCGACTAATGTGTTGTTAGATAAAAATCTCAACCCCAAGATTTCGGACTTTGGTCTTGCCAAGCTTGAAGAAGAAGGAAATACACACATAAGCACTCGAATTGCTGGAACTTTGTGAGTCATTTTTGAATAAATTATTCATTTTTGTAATAATTGATCCTGCTTTTGAATCTTTTACAGTTTGTGCCTACCCAGTTTGTGCCTACCCAACTCCAACCAGACTTCAATAAATGCCATCACACTAATGGCATTTACGTTCTTAACCCAGCAACATTGAATTGCGTTAAAAAGTTATTAAATTTGACTTCTATTGTAAAATATAATCTCAAATTATTAATGCCTAGTATCCTGGTATTGTAGTGGTTATATTGCGCCAGAGTATGCATTGCGAGGTTACTTAACTGATAAAGCAGACGTGTACAGTTTTGGTATTGTGGCCTTGGAAATAGTTAGTGGAAGGAGCAATACTACTTATTGATCAAAGGACGATTGCTTTTATCTGCTTGATTGGGTAACTTGAATTTCATTCTTATGGGAATTGTAGCTTTTCTTTGTTTTTATTGCAGTTTATCTGGTTATTCTTGATACTACTTTCAACTTAATATATACTAATTACTATGACTTCAGGCACTTGAATTAAAAGAAAAAGAGAGTTTAATGGAGCTAGTTGATCCAAGGTTAGGGTCCAATTTCAACCAGAGAGAGGCAATGACCATGATCAATATTGCTCTGCATTGCACCAATGTGGTGCCTGGAGAAAGGCCATGCATGTCTTTAGTGGTGGGGATGTTGGAAGGCAAGGTTGATGTGAAGGAGTTGGTTTCTCATCCAAATGAGTCGAGAGCAGAGATGGGTGCAATGTGGACCATTTTGAAGCAGAGTTTGAAACAAACTGACAATCAGAACCAGGAAGAGATTATGTCTACGGACATGTCAAGTACCAATTATTCTTCAGCATCAATGAGTAGAAACTAG ATGCTTCATATGACTGGATGTTGGTTCATCTCTTGTTCATTATTTTATTTTACCAGAAACTTATGTTATTATTATCTGTCTTCAATTGAAGTAGACTTTGAGTCTCCATCAAAAGGACGAAAACTCTTACCAGTAGGTGCTATACTTGGAATTGTGGCTGCAGTTGCCCTTGTTATAATTTCAATTCTTGGAATTCTATGGTGGCAAGGTTGCCTTGGACGGAAAAACACACTTCATCAAGATCTTAGAGGTCTAGATCTGAAAACTGGTTCATTCACATTAAGGCAAATCAAAGCTGCCACAAATAATTTTGACGTTTCTAATAAGATTGGAGAAGGTGGTTTTGGTCCTGTTTATAAGGCACTTGAATTAAAAGAAAAAGAGAGTTTAATGGAGCTAGTTGATCCAAGGTTAGGGTCCAATTTCAACCAGAGAGAGGCAATGACCATGATCAATATTGCTCTGCATTGCACCAATGTGGTGCCTGGAGAAAGGCCATGCATGTCTTTAGTGGTGGGGATGTTGGAAGGCAAGGTTGATGTGAAGGAGTTGGTTTCTCATCCAAATGAGTCGAGAGCAGAGATGGGTGCAATGTGGACCATTTTGAAGCAGAGTTTGAAACAAACTGACAATCAGAACCAGGAAGAGATTATGTCTACGGACATGTCAAGTACCAATTATTCTTCAGCATCAATGAGTAGAAACTAG ATGCTTCATATGACTGGATGTTGGTTCATCTCTTGTTCATTATTTTATTTTACCAGAAACTTATGTTATTATTATCTGTCTTCAATTGAAGTAGACTTTGAGTCTCCATCAAAAGGACGAAAACTCTTACCAGTAGGTGCTATACTTGGAATTGTGGCTGCAGTTGCCCTTGTTATAATTTCAATTCTTGGAATTCTATGGTGGCAAGGTTGCCTTGGACGGAAAAACACACTTCATCAAGATCTTAGAGGTCTAGATCTGAAAACTGGTTCATTCACATTAAGGCAAATCAAAGCTGCCACAAATAATTTTGACGTTTCTAATAAGATTGGAGAAGGTGGTTTTGGTCCTGTTTATAAGGCACTTGAATTAAAAGAAAAAGAGAGTTTAATGGAGCTAGTTGATCCAAGGTTAGGGTCCAATTTCAACCAGAGAGAGGCAATGACCATGATCAATATTGCTCTGCATTGCACCAATGTGGTGCCTGGAGAAAGGCCATGCATGTCTTTAGTGGTGGGGATGTTGGAAGGCAAGGTTGATGTGAAGGAGTTGGTTTCTCATCCAAATGAGTCGAGAGCAGAGATGGGTGCAATGTGGACCATTTTGAAGCAGAGTTTGAAACAAACTGACAATCAGAACCAGGAAGAGATTATGTCTACGGACATGTCAAGTACCAATTATTCTTCAGCATCAATGAGTAGAAACTAG MLHMTGCWFISCSLFYFTRNLCYYYLSSIEVDFESPSKGRKLLPVGAILGIVAAVALVIISILGILWWQGCLGRKNTLHQDLRGLDLKTGSFTLRQIKAATNNFDVSNKIGEGGFGPVYKALELKEKESLMELVDPRLGSNFNQREAMTMINIALHCTNVVPGERPCMSLVVGMLEGKVDVKELVSHPNESRAEMGAMWTILKQSLKQTDNQNQEEIMSTDMSSTNYSSASMSRN Homology
BLAST of ClCG11G017230 vs. NCBI nr
Match: XP_038898064.1 (probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 isoform X4 [Benincasa hispida]) HSP 1 Score: 253.1 bits (645), Expect = 2.4e-63 Identity = 173/409 (42.30%), Postives = 187/409 (45.72%), Query Frame = 0
BLAST of ClCG11G017230 vs. NCBI nr
Match: XP_038898065.1 (probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 isoform X5 [Benincasa hispida]) HSP 1 Score: 253.1 bits (645), Expect = 2.4e-63 Identity = 173/409 (42.30%), Postives = 187/409 (45.72%), Query Frame = 0
BLAST of ClCG11G017230 vs. NCBI nr
Match: XP_038898061.1 (probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 isoform X1 [Benincasa hispida]) HSP 1 Score: 253.1 bits (645), Expect = 2.4e-63 Identity = 173/409 (42.30%), Postives = 187/409 (45.72%), Query Frame = 0
BLAST of ClCG11G017230 vs. NCBI nr
Match: XP_038898063.1 (probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 isoform X3 [Benincasa hispida]) HSP 1 Score: 253.1 bits (645), Expect = 2.4e-63 Identity = 173/409 (42.30%), Postives = 187/409 (45.72%), Query Frame = 0
BLAST of ClCG11G017230 vs. NCBI nr
Match: XP_038898062.1 (probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 isoform X2 [Benincasa hispida]) HSP 1 Score: 253.1 bits (645), Expect = 2.4e-63 Identity = 173/409 (42.30%), Postives = 187/409 (45.72%), Query Frame = 0
BLAST of ClCG11G017230 vs. ExPASy Swiss-Prot
Match: C0LGN2 (Probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 OS=Arabidopsis thaliana OX=3702 GN=LRR-RLK PE=1 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 5.5e-18 Identity = 41/79 (51.90%), Postives = 60/79 (75.95%), Query Frame = 0
HSP 2 Score: 67.0 bits (162), Expect = 3.2e-10 Identity = 44/114 (38.60%), Postives = 71/114 (62.28%), Query Frame = 0
BLAST of ClCG11G017230 vs. ExPASy Swiss-Prot
Match: C0LGG8 (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana OX=3702 GN=At1g53430 PE=1 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 3.9e-16 Identity = 51/84 (60.71%), Postives = 61/84 (72.62%), Query Frame = 0
HSP 2 Score: 67.8 bits (164), Expect = 1.9e-10 Identity = 49/120 (40.83%), Postives = 71/120 (59.17%), Query Frame = 0
BLAST of ClCG11G017230 vs. ExPASy Swiss-Prot
Match: C0LGG9 (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana OX=3702 GN=At1g53440 PE=2 SV=2) HSP 1 Score: 85.5 bits (210), Expect = 8.8e-16 Identity = 53/107 (49.53%), Postives = 66/107 (61.68%), Query Frame = 0
HSP 2 Score: 67.8 bits (164), Expect = 1.9e-10 Identity = 42/112 (37.50%), Postives = 69/112 (61.61%), Query Frame = 0
BLAST of ClCG11G017230 vs. ExPASy Swiss-Prot
Match: C0LGG7 (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana OX=3702 GN=At1g53420 PE=2 SV=2) HSP 1 Score: 85.1 bits (209), Expect = 1.1e-15 Identity = 51/139 (36.69%), Postives = 78/139 (56.12%), Query Frame = 0
HSP 2 Score: 75.9 bits (185), Expect = 6.9e-13 Identity = 40/63 (63.49%), Postives = 50/63 (79.37%), Query Frame = 0
BLAST of ClCG11G017230 vs. ExPASy Swiss-Prot
Match: C0LGE0 (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana OX=3702 GN=At1g07650 PE=1 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 1.1e-15 Identity = 45/75 (60.00%), Postives = 57/75 (76.00%), Query Frame = 0
HSP 2 Score: 75.9 bits (185), Expect = 6.9e-13 Identity = 37/71 (52.11%), Postives = 52/71 (73.24%), Query Frame = 0
BLAST of ClCG11G017230 vs. ExPASy TrEMBL
Match: A0A6J1BZ22 (Non-specific serine/threonine protein kinase OS=Momordica charantia OX=3673 GN=LOC111006534 PE=4 SV=1) HSP 1 Score: 220.7 bits (561), Expect = 6.4e-54 Identity = 156/412 (37.86%), Postives = 176/412 (42.72%), Query Frame = 0
BLAST of ClCG11G017230 vs. ExPASy TrEMBL
Match: A0A6J1BXZ3 (Non-specific serine/threonine protein kinase OS=Momordica charantia OX=3673 GN=LOC111006481 PE=4 SV=1) HSP 1 Score: 194.5 bits (493), Expect = 4.9e-46 Identity = 144/403 (35.73%), Postives = 166/403 (41.19%), Query Frame = 0
BLAST of ClCG11G017230 vs. ExPASy TrEMBL
Match: A0A6J1C170 (probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111006481 PE=4 SV=1) HSP 1 Score: 186.8 bits (473), Expect = 1.0e-43 Identity = 139/396 (35.10%), Postives = 160/396 (40.40%), Query Frame = 0
BLAST of ClCG11G017230 vs. ExPASy TrEMBL
Match: A0A498IPK4 (Non-specific serine/threonine protein kinase OS=Malus domestica OX=3750 GN=DVH24_026954 PE=4 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 1.5e-42 Identity = 101/205 (49.27%), Postives = 137/205 (66.83%), Query Frame = 0
BLAST of ClCG11G017230 vs. ExPASy TrEMBL
Match: A0A498IPB4 (Non-specific serine/threonine protein kinase OS=Malus domestica OX=3750 GN=DVH24_026943 PE=4 SV=1) HSP 1 Score: 182.6 bits (462), Expect = 1.9e-42 Identity = 99/195 (50.77%), Postives = 131/195 (67.18%), Query Frame = 0
BLAST of ClCG11G017230 vs. TAIR 10
Match: AT3G14840.2 (Leucine-rich repeat transmembrane protein kinase ) HSP 1 Score: 92.8 bits (229), Expect = 3.9e-19 Identity = 41/79 (51.90%), Postives = 60/79 (75.95%), Query Frame = 0
HSP 2 Score: 67.0 bits (162), Expect = 2.3e-11 Identity = 44/114 (38.60%), Postives = 71/114 (62.28%), Query Frame = 0
BLAST of ClCG11G017230 vs. TAIR 10
Match: AT1G53430.1 (Leucine-rich repeat transmembrane protein kinase ) HSP 1 Score: 86.7 bits (213), Expect = 2.8e-17 Identity = 51/84 (60.71%), Postives = 61/84 (72.62%), Query Frame = 0
HSP 2 Score: 67.8 bits (164), Expect = 1.3e-11 Identity = 49/120 (40.83%), Postives = 71/120 (59.17%), Query Frame = 0
BLAST of ClCG11G017230 vs. TAIR 10
Match: AT1G53430.2 (Leucine-rich repeat transmembrane protein kinase ) HSP 1 Score: 86.7 bits (213), Expect = 2.8e-17 Identity = 51/84 (60.71%), Postives = 61/84 (72.62%), Query Frame = 0
HSP 2 Score: 67.8 bits (164), Expect = 1.3e-11 Identity = 49/120 (40.83%), Postives = 71/120 (59.17%), Query Frame = 0
BLAST of ClCG11G017230 vs. TAIR 10
Match: AT1G53440.1 (Leucine-rich repeat transmembrane protein kinase ) HSP 1 Score: 85.5 bits (210), Expect = 6.2e-17 Identity = 53/107 (49.53%), Postives = 66/107 (61.68%), Query Frame = 0
HSP 2 Score: 67.8 bits (164), Expect = 1.3e-11 Identity = 42/112 (37.50%), Postives = 69/112 (61.61%), Query Frame = 0
BLAST of ClCG11G017230 vs. TAIR 10
Match: AT1G53420.1 (Leucine-rich repeat transmembrane protein kinase ) HSP 1 Score: 85.1 bits (209), Expect = 8.1e-17 Identity = 51/139 (36.69%), Postives = 78/139 (56.12%), Query Frame = 0
HSP 2 Score: 75.9 bits (185), Expect = 4.9e-14 Identity = 40/63 (63.49%), Postives = 50/63 (79.37%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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